Rmu_sc0009462.1_g000004

N-lysine methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009462.1
Physical Location & Seq
Forward (+)
9504 .. 9905
402 bp
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UTR
Exon/CDS
Intron
Rmu_sc0009462.1_g000004.1.cds

Sequence Viewer

Length: 402 bp
atgttgttacaacaggatgcatatgataagattgatctggctcaagcagccacgggaaattccaatgggcatatggacggcattttatcagataaaactgaaaaattgtccgacataactgctgagttcagtgaagcggtgttgttgacaaatactatttgcaatgctctcttgtcccttgcagatatgcgggagagcttgtatggtaaaaattcaatagaagacgacattgaagcactgaagaggtgttgtagtataaaagagaaaaagttgtaccattcgttgatgcttcgtatcagtgagaggagaatcattcagaaattcagaacatttgccacttctggttcccaagttacaactggtgaacaagcctctccgagaaagaagttgaaactaaaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

133

Amino Acids

14.87

Weight (kDa)

8.42

Isoelectric Point (pI)

31.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 137, 190
AcsI RAATTY 3 cut(s) 58, 211, 320
AcuI CTGAAG 1 cut(s) 260
AfaI GTAC 1 cut(s) 275
AgsI TTSAA 3 cut(s) 216, 233, 391
AluBI AGCT 1 cut(s) 198
AluI AGCT 1 cut(s) 198
ApeKI GCWGC 1 cut(s) 47
ApoI RAATTY 3 cut(s) 58, 211, 320
AsuHPI GGTGA 1 cut(s) 374
BbsI GAAGAC 1 cut(s) 228
BbvI GCAGC 1 cut(s) 59
BceAI ACGGC 1 cut(s) 94
BcgI CGANNNNNNTGC 2 cut(s) 101, 135
BisI GCNGC 1 cut(s) 48
BlsI GCNGC 1 cut(s) 49
BmiI GGNNCC 1 cut(s) 346
BmsI GCATC 2 cut(s) 7, 276
BpiI GAAGAC 1 cut(s) 228
BpuEI CTTGAG 1 cut(s) 27
BsaJI CCNNGG 1 cut(s) 51
BsaXI ACNNNNNCTCC 2 cut(s) 185, 215
Bse1I ACTGG 1 cut(s) 364
Bse3DI GCAATG 1 cut(s) 169
BseDI CCNNGG 1 cut(s) 51
BseGI GGATG 1 cut(s) 22
BseMI GCAATG 1 cut(s) 169
BseMII CTCAG 1 cut(s) 114
BseNI ACTGG 1 cut(s) 364
BseRI GAGGAG 1 cut(s) 319
BseXI GCAGC 1 cut(s) 59
BslFI GGGAC 1 cut(s) 160
BsmFI GGGAC 1 cut(s) 160
Bsp143I GATC 1 cut(s) 34
BspACI CCGC 2 cut(s) 137, 190
BspCNI CTCAG 1 cut(s) 115
BspLI GGNNCC 1 cut(s) 346
BsrDI GCAATG 1 cut(s) 169
BsrI ACTGG 1 cut(s) 364
BssECI CCNNGG 1 cut(s) 51
BssMI GATC 1 cut(s) 34
Bst6I CTCTTC 1 cut(s) 236
BstDEI CTNAG 1 cut(s) 123
BstDSI CCRYGG 1 cut(s) 51
BstF5I GGATG 1 cut(s) 22
BstKTI GATC 1 cut(s) 37
BstMBI GATC 1 cut(s) 34
BstMWI GCNNNNNNNGC 1 cut(s) 47
BstV1I GCAGC 1 cut(s) 59
BstV2I GAAGAC 1 cut(s) 228
BtgI CCRYGG 1 cut(s) 51
BtsCI GGATG 1 cut(s) 22
BtsIMutI CAGTG 3 cut(s) 136, 236, 304
Csp6I GTAC 1 cut(s) 274
CviJI RGCY 4 cut(s) 41, 50, 198, 371
CviKI_1 RGCY 4 cut(s) 41, 50, 198, 371
CviQI GTAC 1 cut(s) 274
DdeI CTNAG 1 cut(s) 123
DpnI GATC 1 cut(s) 36
DpnII GATC 1 cut(s) 34
Eam1104I CTCTTC 1 cut(s) 236
EarI CTCTTC 1 cut(s) 236
Eco57I CTGAAG 1 cut(s) 260
EcoT22I ATGCAT 1 cut(s) 22
FaiI YATR 8 cut(s) 22, 24, 72, 74, 116, 188, 204, 257
FaqI GGGAC 1 cut(s) 160
FauI CCCGC 1 cut(s) 183
FauNDI CATATG 2 cut(s) 22, 72
Fnu4HI GCNGC 1 cut(s) 48
FokI GGATG 1 cut(s) 29
Fsp4HI GCNGC 1 cut(s) 48
GluI GCNGC 1 cut(s) 48
HincII GTYRAC 1 cut(s) 147
HindII GTYRAC 1 cut(s) 147
HinfI GANTC 1 cut(s) 309
HphI GGTGA 1 cut(s) 374
Hpy166II GTNNAC 2 cut(s) 147, 365
Hpy188I TCNGA 5 cut(s) 91, 112, 318, 326, 378
Hpy8I GTNNAC 2 cut(s) 147, 365
HpyCH4V TGCA 3 cut(s) 20, 162, 182
HpyF10VI GCNNNNNNNGC 1 cut(s) 47
HpyF3I CTNAG 1 cut(s) 123
Kzo9I GATC 1 cut(s) 34
LpnPI CCDG 3 cut(s) 23, 327, 345
Lsp1109I GCAGC 1 cut(s) 59
LweI GCATC 2 cut(s) 7, 276
MaeIII GTNAC 2 cut(s) 6, 352
MalI GATC 1 cut(s) 36
MboI GATC 1 cut(s) 34
MboII GAAGA 2 cut(s) 233, 253
MluCI AATT 4 cut(s) 58, 104, 211, 320
MmeI TCCRAC 1 cut(s) 135
MnlI CCTC 3 cut(s) 237, 297, 382
Mph1103I ATGCAT 1 cut(s) 22
MwoI GCNNNNNNNGC 1 cut(s) 47
NdeI CATATG 2 cut(s) 22, 72
NdeII GATC 1 cut(s) 34
NlaIV GGNNCC 1 cut(s) 346
NsiI ATGCAT 1 cut(s) 22
PfeI GAWTC 1 cut(s) 309
PkrI GCNGC 1 cut(s) 49
PspN4I GGNNCC 1 cut(s) 346
RsaI GTAC 1 cut(s) 275
RsaNI GTAC 1 cut(s) 274
SatI GCNGC 1 cut(s) 48
Sau3AI GATC 1 cut(s) 34
SetI ASST 2 cut(s) 200, 248
SfaNI GCATC 2 cut(s) 7, 276
SmlI CTYRAG 1 cut(s) 42
SmoI CTYRAG 1 cut(s) 42
Sse9I AATT 4 cut(s) 58, 104, 211, 320
SsiI CCGC 2 cut(s) 137, 190
TasI AATT 4 cut(s) 58, 104, 211, 320
TfiI GAWTC 1 cut(s) 309
TscAI CASTG 3 cut(s) 136, 243, 304
TseI GCWGC 1 cut(s) 47
TspRI CASTG 3 cut(s) 136, 243, 304
XapI RAATTY 3 cut(s) 58, 211, 320
XcmI CCANNNNNNNNNTGG 2 cut(s) 70, 356
Zsp2I ATGCAT 1 cut(s) 22
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.