Rh3BG300900

N-lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0003800
Physical Location & Seq
Reverse (-)
30251491 .. 30252490
1000 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG300900.1

Sequence Viewer

Length: 765 bp
ATGTCAAAGTTGGAGCTGAGACACAACTCACAGCTGAAGCCTGATGTGAAATGCTGCTTCTATGAAACTATTTGGATTAACCCTTGTCTTCTCTTCCAGGTCTTCAATACATATGGCTTATTGGGCAATGCTGCACTTCTACATAGATATGGATTTACAGAGCCTGATAATCCATTTGACATTGTGAATATCGACTTGGAACTTGTACTTCAGTGGAGTGCATCTTTGTTTTCTGGCCAGCATCGTAGAGCGAGGCTATCTTTGTGGAGAAGATTAGGATACTCCGGATGTGCCAGCCACAACTCGGAATATTTTGAGATTTCGTTTAATGGGGAACCCCCAAATGAGCTGCTGCTTTTGTTGTACATAATGTTGTTACAACAGGATGCATATGATAAGATTGATCTGGCTCTAGCAACCACGGGAAATTCCAATGGGCATATGGACGGCATTTTATCAGATAAAACTGAAAAATTGTCTGACATAACTGCTGAGTTCAGTGAAGCCGTGTTGTTGACAAATACTATTTGTAATGCTCTCTTGTCCCTTGCAGATATGCGGGAGAGCTTGTATGGTAAAAATTCAATAGAAGACGACATTGAAGCACTGAAGAGGTGTTGTAGTATAAAAGAGAAAAAGTTGTACCATTCGTTGATGCTTCGTATCAGTGAGAGGAGAATCATTCAGAAATTCAGAACATTTGCCACTTCCCAAGTTAGAACTGGTGAACAAGCCTCTCCAAGAAAGAAGATGAAACGAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rubis-subs-bind SET

Protein Analysis

254

Amino Acids

29.14

Weight (kDa)

8.11

Isoelectric Point (pI)

41.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 284
AciI CCGC 1 cut(s) 559
AcoI YGGCCR 1 cut(s) 235
AcsI RAATTY 3 cut(s) 427, 580, 689
AcuI CTGAAG 3 cut(s) 56, 194, 629
AfaI GTAC 3 cut(s) 207, 365, 644
AfiI CCNNNNNNNGG 1 cut(s) 304
AgsI TTSAA 3 cut(s) 106, 585, 602
AjnI CCWGG 1 cut(s) 96
AjuI GAANNNNNNNTTGG 2 cut(s) 179, 211
AluBI AGCT 4 cut(s) 16, 34, 349, 567
AluI AGCT 4 cut(s) 16, 34, 349, 567
Alw26I GTCTC 1 cut(s) 13
AlwNI CAGNNNCTG 1 cut(s) 164
Aor13HI TCCGGA 1 cut(s) 284
AoxI GGCC 1 cut(s) 235
ApeKI GCWGC 4 cut(s) 54, 131, 349, 352
ApoI RAATTY 3 cut(s) 427, 580, 689
AsuHPI GGTGA 1 cut(s) 737
BalI TGGCCA 1 cut(s) 237
BbsI GAAGAC 3 cut(s) 80, 94, 597
BbvI GCAGC 4 cut(s) 41, 118, 336, 339
BceAI ACGGC 2 cut(s) 463, 491
BciT130I CCWGG 1 cut(s) 98
BciVI GTATCC 1 cut(s) 272
BcoDI GTCTC 1 cut(s) 13
BfaI CTAG 1 cut(s) 413
BfuI GTATCC 1 cut(s) 272
BisI GCNGC 4 cut(s) 55, 132, 350, 353
BlsI GCNGC 4 cut(s) 56, 133, 351, 354
Bme1390I CCNGG 1 cut(s) 98
BmiI GGNNCC 1 cut(s) 336
BmrFI CCNGG 1 cut(s) 98
BmsI GCATC 4 cut(s) 230, 250, 376, 645
BpiI GAAGAC 3 cut(s) 80, 94, 597
BsaJI CCNNGG 1 cut(s) 420
BsaWI WCCGGW 1 cut(s) 284
BsaXI ACNNNNNCTCC 2 cut(s) 554, 584
Bsc4I CCNNNNNNNGG 1 cut(s) 304
Bse1I ACTGG 1 cut(s) 727
Bse3DI GCAATG 1 cut(s) 133
BseAI TCCGGA 1 cut(s) 284
BseBI CCWGG 1 cut(s) 98
BseDI CCNNGG 1 cut(s) 420
BseGI GGATG 2 cut(s) 293, 391
BseLI CCNNNNNNNGG 1 cut(s) 304
BseMI GCAATG 1 cut(s) 133
BseMII CTCAG 2 cut(s) 8, 483
BseNI ACTGG 1 cut(s) 727
BseRI GAGGAG 1 cut(s) 688
BseXI GCAGC 4 cut(s) 41, 118, 336, 339
BsgI GTGCAG 1 cut(s) 117
BshFI GGCC 1 cut(s) 237
BsiSI CCGG 1 cut(s) 285
BslFI GGGAC 1 cut(s) 529
BslI CCNNNNNNNGG 1 cut(s) 304
BsmAI GTCTC 1 cut(s) 13
BsmFI GGGAC 1 cut(s) 529
BsnI GGCC 1 cut(s) 237
Bsp13I TCCGGA 1 cut(s) 284
Bsp1407I TGTACA 1 cut(s) 363
Bsp143I GATC 1 cut(s) 403
BspACI CCGC 1 cut(s) 559
BspANI GGCC 1 cut(s) 237
BspCNI CTCAG 2 cut(s) 9, 484
BspEI TCCGGA 1 cut(s) 284
BspLI GGNNCC 1 cut(s) 336
BsrDI GCAATG 1 cut(s) 133
BsrGI TGTACA 1 cut(s) 363
BsrI ACTGG 1 cut(s) 727
BssECI CCNNGG 1 cut(s) 420
BssMI GATC 1 cut(s) 403
Bst2UI CCWGG 1 cut(s) 98
Bst6I CTCTTC 2 cut(s) 98, 605
BstAUI TGTACA 1 cut(s) 363
BstC8I GCNNGC 2 cut(s) 239, 295
BstDEI CTNAG 2 cut(s) 17, 492
BstDSI CCRYGG 1 cut(s) 420
BstF5I GGATG 2 cut(s) 293, 391
BstKTI GATC 1 cut(s) 406
BstMAI GTCTC 1 cut(s) 13
BstMBI GATC 1 cut(s) 403
BstMWI GCNNNNNNNGC 1 cut(s) 123
BstNI CCWGG 1 cut(s) 98
BstSCI CCNGG 1 cut(s) 96
BstV1I GCAGC 4 cut(s) 41, 118, 336, 339
BstV2I GAAGAC 3 cut(s) 80, 94, 597
BsuI GTATCC 1 cut(s) 272
BsuRI GGCC 1 cut(s) 237
BtgI CCRYGG 1 cut(s) 420
BtsCI GGATG 2 cut(s) 293, 391
BtsIMutI CAGTG 4 cut(s) 218, 505, 605, 673
Cac8I GCNNGC 2 cut(s) 239, 295
CaiI CAGNNNCTG 1 cut(s) 164
Csp6I GTAC 3 cut(s) 206, 364, 643
CviQI GTAC 3 cut(s) 206, 364, 643
DdeI CTNAG 2 cut(s) 17, 492
DpnI GATC 1 cut(s) 405
DpnII GATC 1 cut(s) 403
EaeI YGGCCR 1 cut(s) 235
Eam1104I CTCTTC 2 cut(s) 98, 605
EarI CTCTTC 2 cut(s) 98, 605
Eco57I CTGAAG 3 cut(s) 56, 194, 629
EcoRII CCWGG 1 cut(s) 96
EcoT22I ATGCAT 1 cut(s) 391
FaqI GGGAC 1 cut(s) 529
FauI CCCGC 1 cut(s) 552
FauNDI CATATG 3 cut(s) 112, 391, 441
Fnu4HI GCNGC 4 cut(s) 55, 132, 350, 353
FokI GGATG 2 cut(s) 300, 398
Fsp4HI GCNGC 4 cut(s) 55, 132, 350, 353
FspBI CTAG 1 cut(s) 413
GluI GCNGC 4 cut(s) 55, 132, 350, 353
HaeIII GGCC 1 cut(s) 237
HapII CCGG 1 cut(s) 285
HincII GTYRAC 1 cut(s) 516
HindII GTYRAC 1 cut(s) 516
HinfI GANTC 1 cut(s) 678
HpaII CCGG 1 cut(s) 285
HphI GGTGA 1 cut(s) 737
Hpy166II GTNNAC 2 cut(s) 516, 728
Hpy188I TCNGA 5 cut(s) 307, 460, 481, 687, 695
Hpy188III TCNNGA 1 cut(s) 285
Hpy8I GTNNAC 2 cut(s) 516, 728
HpyCH4V TGCA 4 cut(s) 134, 221, 389, 551
HpyF10VI GCNNNNNNNGC 1 cut(s) 123
HpyF3I CTNAG 2 cut(s) 17, 492
Kpn2I TCCGGA 1 cut(s) 284
Kzo9I GATC 1 cut(s) 403
LmnI GCTCC 1 cut(s) 13
Lsp1109I GCAGC 4 cut(s) 41, 118, 336, 339
LweI GCATC 4 cut(s) 230, 250, 376, 645
MaeI CTAG 1 cut(s) 413
MaeIII GTNAC 1 cut(s) 375
MalI GATC 1 cut(s) 405
MboI GATC 1 cut(s) 403
MboII GAAGA 7 cut(s) 80, 85, 94, 282, 602, 622, 760
MlsI TGGCCA 1 cut(s) 237
MluCI AATT 4 cut(s) 427, 473, 580, 689
MluNI TGGCCA 1 cut(s) 237
MnlI CCTC 4 cut(s) 246, 606, 666, 745
Mox20I TGGCCA 1 cut(s) 237
Mph1103I ATGCAT 1 cut(s) 391
MroI TCCGGA 1 cut(s) 284
MscI TGGCCA 1 cut(s) 237
MseI TTAA 2 cut(s) 78, 327
MslI CAYNNNNRTG 1 cut(s) 147
Msp20I TGGCCA 1 cut(s) 237
MspA1I CMGCKG 1 cut(s) 34
MspI CCGG 1 cut(s) 285
MspR9I CCNGG 1 cut(s) 98
MvaI CCWGG 1 cut(s) 98
MwoI GCNNNNNNNGC 1 cut(s) 123
NdeI CATATG 3 cut(s) 112, 391, 441
NdeII GATC 1 cut(s) 403
NlaIV GGNNCC 1 cut(s) 336
NsiI ATGCAT 1 cut(s) 391
PfeI GAWTC 1 cut(s) 678
PkrI GCNGC 4 cut(s) 56, 133, 351, 354
Psp6I CCWGG 1 cut(s) 96
PspGI CCWGG 1 cut(s) 96
PspN4I GGNNCC 1 cut(s) 336
PstNI CAGNNNCTG 1 cut(s) 164
PvuII CAGCTG 1 cut(s) 34
RsaI GTAC 3 cut(s) 207, 365, 644
RsaNI GTAC 3 cut(s) 206, 364, 643
RseI CAYNNNNRTG 1 cut(s) 147
SaqAI TTAA 2 cut(s) 78, 327
SatI GCNGC 4 cut(s) 55, 132, 350, 353
Sau3AI GATC 1 cut(s) 403
ScrFI CCNGG 1 cut(s) 98
SetI ASST 6 cut(s) 18, 36, 102, 351, 569, 617
SfaNI GCATC 4 cut(s) 230, 250, 376, 645
SmiMI CAYNNNNRTG 1 cut(s) 147
Sse9I AATT 4 cut(s) 427, 473, 580, 689
SsiI CCGC 1 cut(s) 559
SspI AATATT 1 cut(s) 311
SspMI CTAG 1 cut(s) 413
StyD4I CCNGG 1 cut(s) 96
TaqI TCGA 1 cut(s) 192
TasI AATT 4 cut(s) 427, 473, 580, 689
TatI WGTACW 2 cut(s) 205, 363
TfiI GAWTC 1 cut(s) 678
Tru1I TTAA 2 cut(s) 78, 327
Tru9I TTAA 2 cut(s) 78, 327
TscAI CASTG 4 cut(s) 218, 505, 612, 673
TseI GCWGC 4 cut(s) 54, 131, 349, 352
TspDTI ATGAA 1 cut(s) 78
TspRI CASTG 4 cut(s) 218, 505, 612, 673
XapI RAATTY 3 cut(s) 427, 580, 689
XcmI CCANNNNNNNNNTGG 2 cut(s) 439, 719
XspI CTAG 1 cut(s) 413
Zsp2I ATGCAT 1 cut(s) 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.