Rh3DG294700

N-lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0003800
Physical Location & Seq
Reverse (-)
30643338 .. 30644813
1476 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG294700.1

Sequence Viewer

Length: 963 bp
ATGGAGCTGGACGAGACGGTGAAGGAAGACAGAGGAGTGATGTTGGAGGACTGGAAAGAGAGTATTGAGGCATTGCAGGACCAAATTGGGACCCAATTTGAGAGCTTTTTCGGGTTTGAGGAGTACCTGGCAGCAAGAACGCTGATTGCTTCTAGGTCTTTTCAGATTGATGATCACTACCACGGAGTCGGAATGGTTCCTTTGGCTGACATACACAACTCACAGCTGAAGCCTGATGTGAAATGCTGCTTCTATGAAACTATTTGTATTAACCCTTGTCTTCTCTTCCAGGTCTTCAACACATACGGCTTATTGGGCAATGCTGCACTTCTTCATAGATATGGGTTTACAGAGCCTGATAATCCATTTGACATTGTGAATATCGACTTGGAACTTGTACTTCAGTGGAGTGCGTCTTTGTTTTCTGGCCAGCATCGTAGAGCGAGGCTATCTTTGTGGAGAAGATTAGGATACTCCGGATGTGCCACCCACAACTCGGAATATTTTGAGATTTCGTTTAATGGGGAACCCCCAAATGAGCTGCTGCTTTTGTTGTACATAATGTTGTTACAACAGGATGCATATGATAAGATTGATCTGGCTCAAGCAGCCACGGGAAATTCCAATGGGCATATGGACGGCATTTTATCAGATAAAACTGAAAAATTGTCCGACATAACTGCTGAGTTCAGTGAAGCGGTGTTGTTGACAAATACTATTTGCAATGCTCTCTTGTCCCTTGCAGATATGCGGGAGAGCTTGTATGGTAAAAATTCAATAGAAGACGACATTGAAGCACTGAAGAGGTGTTGTAGTATAAAAGAGAAAAAGTTGTACCATTCGTTGATGCTTCGTATCAGTGAGAGGAGAATCATTCAGAAATTCAGAACATTTGCCACTTCTGGTTCCCAAGTTACAACTGGTGAACAAGCCTCTCCGAGAAAGAAGTTGAAACGAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rubis-subs-bind SET

Protein Analysis

320

Amino Acids

36.42

Weight (kDa)

5.28

Isoelectric Point (pI)

39.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 476
AciI CCGC 2 cut(s) 698, 751
AcoI YGGCCR 1 cut(s) 427
AcsI RAATTY 3 cut(s) 619, 772, 881
AcuI CTGAAG 3 cut(s) 248, 386, 821
AfaI GTAC 4 cut(s) 125, 399, 557, 836
AfiI CCNNNNNNNGG 1 cut(s) 496
AgsI TTSAA 4 cut(s) 298, 777, 794, 952
AjnI CCWGG 2 cut(s) 126, 288
AjuI GAANNNNNNNTTGG 2 cut(s) 371, 403
AluBI AGCT 5 cut(s) 7, 105, 226, 541, 759
AluI AGCT 5 cut(s) 7, 105, 226, 541, 759
Alw26I GTCTC 1 cut(s) 8
AlwNI CAGNNNCTG 1 cut(s) 356
Aor13HI TCCGGA 1 cut(s) 476
AoxI GGCC 1 cut(s) 427
ApeKI GCWGC 6 cut(s) 131, 246, 323, 541, 544, 608
ApoI RAATTY 3 cut(s) 619, 772, 881
AspS9I GGNCC 2 cut(s) 79, 90
AsuHPI GGTGA 2 cut(s) 31, 935
AvaII GGWCC 2 cut(s) 79, 90
BalI TGGCCA 1 cut(s) 429
BbsI GAAGAC 4 cut(s) 33, 272, 286, 789
BbvI GCAGC 6 cut(s) 143, 233, 310, 528, 531, 620
BceAI ACGGC 2 cut(s) 322, 655
BcgI CGANNNNNNTGC 2 cut(s) 662, 696
BciT130I CCWGG 2 cut(s) 128, 290
BciVI GTATCC 1 cut(s) 464
BclI TGATCA 1 cut(s) 172
BcoDI GTCTC 1 cut(s) 8
BfaI CTAG 1 cut(s) 153
BfuI GTATCC 1 cut(s) 464
BisI GCNGC 6 cut(s) 132, 247, 324, 542, 545, 609
BlsI GCNGC 6 cut(s) 133, 248, 325, 543, 546, 610
Bme1390I CCNGG 2 cut(s) 128, 290
Bme18I GGWCC 2 cut(s) 79, 90
BmgT120I GGNCC 2 cut(s) 79, 90
BmiI GGNNCC 5 cut(s) 91, 92, 198, 528, 907
BmrFI CCNGG 2 cut(s) 128, 290
BmsI GCATC 3 cut(s) 442, 568, 837
BpiI GAAGAC 4 cut(s) 33, 272, 286, 789
BpuEI CTTGAG 1 cut(s) 588
BsaJI CCNNGG 2 cut(s) 181, 612
BsaWI WCCGGW 1 cut(s) 476
BsaXI ACNNNNNCTCC 2 cut(s) 746, 776
Bsc4I CCNNNNNNNGG 1 cut(s) 496
Bse1I ACTGG 2 cut(s) 56, 925
Bse3DI GCAATG 3 cut(s) 71, 325, 730
BseAI TCCGGA 1 cut(s) 476
BseBI CCWGG 2 cut(s) 128, 290
BseDI CCNNGG 2 cut(s) 181, 612
BseGI GGATG 2 cut(s) 485, 583
BseLI CCNNNNNNNGG 1 cut(s) 496
BseMI GCAATG 3 cut(s) 71, 325, 730
BseMII CTCAG 1 cut(s) 675
BseNI ACTGG 2 cut(s) 56, 925
BseRI GAGGAG 3 cut(s) 48, 134, 880
BseXI GCAGC 6 cut(s) 143, 233, 310, 528, 531, 620
BsgI GTGCAG 1 cut(s) 309
BshFI GGCC 1 cut(s) 429
BsiSI CCGG 1 cut(s) 477
BslFI GGGAC 2 cut(s) 103, 721
BslI CCNNNNNNNGG 1 cut(s) 496
BsmAI GTCTC 1 cut(s) 8
BsmBI CGTCTC 1 cut(s) 8
BsmFI GGGAC 2 cut(s) 103, 721
BsnI GGCC 1 cut(s) 429
Bsp13I TCCGGA 1 cut(s) 476
Bsp1407I TGTACA 1 cut(s) 555
Bsp143I GATC 2 cut(s) 172, 595
BspACI CCGC 2 cut(s) 698, 751
BspANI GGCC 1 cut(s) 429
BspCNI CTCAG 1 cut(s) 676
BspEI TCCGGA 1 cut(s) 476
BspLI GGNNCC 5 cut(s) 91, 92, 198, 528, 907
BsrDI GCAATG 3 cut(s) 71, 325, 730
BsrGI TGTACA 1 cut(s) 555
BsrI ACTGG 2 cut(s) 56, 925
BssECI CCNNGG 2 cut(s) 181, 612
BssMI GATC 2 cut(s) 172, 595
Bst2UI CCWGG 2 cut(s) 128, 290
Bst4CI ACNGT 1 cut(s) 19
Bst6I CTCTTC 2 cut(s) 290, 797
BstAUI TGTACA 1 cut(s) 555
BstC8I GCNNGC 1 cut(s) 431
BstDEI CTNAG 1 cut(s) 684
BstDSI CCRYGG 2 cut(s) 181, 612
BstF5I GGATG 2 cut(s) 485, 583
BstKTI GATC 2 cut(s) 175, 598
BstMAI GTCTC 1 cut(s) 8
BstMBI GATC 2 cut(s) 172, 595
BstMWI GCNNNNNNNGC 2 cut(s) 315, 608
BstNI CCWGG 2 cut(s) 128, 290
BstSCI CCNGG 2 cut(s) 126, 288
BstV1I GCAGC 6 cut(s) 143, 233, 310, 528, 531, 620
BstV2I GAAGAC 4 cut(s) 33, 272, 286, 789
BsuI GTATCC 1 cut(s) 464
BsuRI GGCC 1 cut(s) 429
BtgI CCRYGG 2 cut(s) 181, 612
BtsCI GGATG 2 cut(s) 485, 583
BtsIMutI CAGTG 4 cut(s) 410, 697, 797, 865
Cac8I GCNNGC 1 cut(s) 431
CaiI CAGNNNCTG 1 cut(s) 356
Cfr13I GGNCC 2 cut(s) 79, 90
CseI GACGC 1 cut(s) 402
Csp6I GTAC 4 cut(s) 124, 398, 556, 835
CviQI GTAC 4 cut(s) 124, 398, 556, 835
DdeI CTNAG 1 cut(s) 684
DpnI GATC 2 cut(s) 174, 597
DpnII GATC 2 cut(s) 172, 595
EaeI YGGCCR 1 cut(s) 427
Eam1104I CTCTTC 2 cut(s) 290, 797
EarI CTCTTC 2 cut(s) 290, 797
Eco47I GGWCC 2 cut(s) 79, 90
Eco57I CTGAAG 3 cut(s) 248, 386, 821
EcoO109I RGGNCCY 1 cut(s) 90
EcoRII CCWGG 2 cut(s) 126, 288
EcoT22I ATGCAT 1 cut(s) 583
Esp3I CGTCTC 1 cut(s) 8
FaqI GGGAC 2 cut(s) 103, 721
FauI CCCGC 1 cut(s) 744
FauNDI CATATG 2 cut(s) 583, 633
FbaI TGATCA 1 cut(s) 172
Fnu4HI GCNGC 6 cut(s) 132, 247, 324, 542, 545, 609
FokI GGATG 2 cut(s) 492, 590
Fsp4HI GCNGC 6 cut(s) 132, 247, 324, 542, 545, 609
FspBI CTAG 1 cut(s) 153
GluI GCNGC 6 cut(s) 132, 247, 324, 542, 545, 609
HaeIII GGCC 1 cut(s) 429
HapII CCGG 1 cut(s) 477
HgaI GACGC 1 cut(s) 402
HincII GTYRAC 1 cut(s) 708
HindII GTYRAC 1 cut(s) 708
HinfI GANTC 2 cut(s) 186, 870
HpaII CCGG 1 cut(s) 477
HphI GGTGA 2 cut(s) 31, 935
Hpy166II GTNNAC 3 cut(s) 348, 708, 926
Hpy188I TCNGA 8 cut(s) 165, 191, 499, 652, 673, 879, 887, 939
Hpy188III TCNNGA 1 cut(s) 477
Hpy8I GTNNAC 3 cut(s) 348, 708, 926
HpyAV CCTTC 1 cut(s) 16
HpyCH4III ACNGT 1 cut(s) 19
HpyCH4V TGCA 5 cut(s) 76, 326, 581, 723, 743
HpyF10VI GCNNNNNNNGC 2 cut(s) 315, 608
HpyF3I CTNAG 1 cut(s) 684
KflI GGGWCCC 1 cut(s) 90
Kpn2I TCCGGA 1 cut(s) 476
Ksp22I TGATCA 1 cut(s) 172
Kzo9I GATC 2 cut(s) 172, 595
LmnI GCTCC 1 cut(s) 4
Lsp1109I GCAGC 6 cut(s) 143, 233, 310, 528, 531, 620
LweI GCATC 3 cut(s) 442, 568, 837
MaeI CTAG 1 cut(s) 153
MaeIII GTNAC 2 cut(s) 567, 913
MalI GATC 2 cut(s) 174, 597
MboI GATC 2 cut(s) 172, 595
MboII GAAGA 8 cut(s) 38, 272, 277, 286, 323, 474, 794, 814
MlsI TGGCCA 1 cut(s) 429
MluCI AATT 6 cut(s) 84, 95, 619, 665, 772, 881
MluNI TGGCCA 1 cut(s) 429
MlyI GAGTC 1 cut(s) 195
MmeI TCCRAC 3 cut(s) 24, 169, 696
MnlI CCTC 8 cut(s) 26, 40, 61, 112, 438, 798, 858, 943
Mox20I TGGCCA 1 cut(s) 429
Mph1103I ATGCAT 1 cut(s) 583
MroI TCCGGA 1 cut(s) 476
MscI TGGCCA 1 cut(s) 429
MseI TTAA 2 cut(s) 270, 519
MslI CAYNNNNRTG 1 cut(s) 339
Msp20I TGGCCA 1 cut(s) 429
MspA1I CMGCKG 1 cut(s) 226
MspI CCGG 1 cut(s) 477
MspR9I CCNGG 2 cut(s) 128, 290
MvaI CCWGG 2 cut(s) 128, 290
MwoI GCNNNNNNNGC 2 cut(s) 315, 608
NdeI CATATG 2 cut(s) 583, 633
NdeII GATC 2 cut(s) 172, 595
NlaIV GGNNCC 5 cut(s) 91, 92, 198, 528, 907
NsiI ATGCAT 1 cut(s) 583
PfeI GAWTC 1 cut(s) 870
PkrI GCNGC 6 cut(s) 133, 248, 325, 543, 546, 610
PleI GAGTC 1 cut(s) 194
PpsI GAGTC 1 cut(s) 194
PpuMI RGGWCCY 1 cut(s) 90
Psp5II RGGWCCY 1 cut(s) 90
Psp6I CCWGG 2 cut(s) 126, 288
PspGI CCWGG 2 cut(s) 126, 288
PspN4I GGNNCC 5 cut(s) 91, 92, 198, 528, 907
PspPI GGNCC 2 cut(s) 79, 90
PspPPI RGGWCCY 1 cut(s) 90
PstNI CAGNNNCTG 1 cut(s) 356
PvuII CAGCTG 1 cut(s) 226
RsaI GTAC 4 cut(s) 125, 399, 557, 836
RsaNI GTAC 4 cut(s) 124, 398, 556, 835
RseI CAYNNNNRTG 1 cut(s) 339
SaqAI TTAA 2 cut(s) 270, 519
SatI GCNGC 6 cut(s) 132, 247, 324, 542, 545, 609
Sau3AI GATC 2 cut(s) 172, 595
Sau96I GGNCC 2 cut(s) 79, 90
SchI GAGTC 1 cut(s) 195
ScrFI CCNGG 2 cut(s) 128, 290
SetI ASST 9 cut(s) 9, 107, 129, 158, 228, 294, 543, 761, 809
SfaNI GCATC 3 cut(s) 442, 568, 837
SinI GGWCC 2 cut(s) 79, 90
SmiMI CAYNNNNRTG 1 cut(s) 339
SmlI CTYRAG 1 cut(s) 603
SmoI CTYRAG 1 cut(s) 603
Sse9I AATT 6 cut(s) 84, 95, 619, 665, 772, 881
SsiI CCGC 2 cut(s) 698, 751
SspI AATATT 1 cut(s) 503
SspMI CTAG 1 cut(s) 153
StyD4I CCNGG 2 cut(s) 126, 288
TaaI ACNGT 1 cut(s) 19
TaqI TCGA 1 cut(s) 384
TasI AATT 6 cut(s) 84, 95, 619, 665, 772, 881
TatI WGTACW 2 cut(s) 397, 555
TfiI GAWTC 1 cut(s) 870
Tru1I TTAA 2 cut(s) 270, 519
Tru9I TTAA 2 cut(s) 270, 519
TscAI CASTG 4 cut(s) 410, 697, 804, 865
TseI GCWGC 6 cut(s) 131, 246, 323, 541, 544, 608
TspDTI ATGAA 2 cut(s) 270, 323
TspGWI ACGGA 1 cut(s) 198
TspRI CASTG 4 cut(s) 410, 697, 804, 865
VpaK11BI GGWCC 2 cut(s) 79, 90
XapI RAATTY 3 cut(s) 619, 772, 881
XcmI CCANNNNNNNNNTGG 2 cut(s) 631, 917
XspI CTAG 1 cut(s) 153
Zsp2I ATGCAT 1 cut(s) 583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.