Rw0G006750

N-lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00247
OG0003800
Physical Location & Seq
Forward (+)
26575 .. 28061
1487 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G006750.1

Sequence Viewer

Length: 1017 bp
ATGTTGGAGGACTGGAAAGAGAGCATTGAGCCATTGCAGGACCAAATTGGGACCCAATTTGAGAGCTTTTATGGGTTTGAGGAGTACCTGGCAGCAAGGACGCTGATTGCTTCTAGGTCTTTTCAGATTGATGATCACCACCACGGAGTCGGAATGGTTCCTTTGGCTGACATCTTTAATCACAAAATTGCAGCTGAGGATGTGCACTTGAACACCTCTGCATCTACTGAAAACAGTGAATTCGACCCGACTGAAAATAGTGGTAGCGAAGAAGGCAATGAATCTACTACTAGTACAACTTCCAGTCTTAGTCCTACTACTGGTGCTAGTACTACTGATGATGTAGCTTCTAGTGCTACTGAAGATGGTGATTTGGAGATGGTTATGGTCAAAGATGTCAAAGTTGGAGCTGAGGTCTTCAACACATACGGCTTATTGGGCAATGCTGCACTTCTTCATAGATATGGGTTTACAGAGCCTGATAATCCATTTGACATTGTGAATATCGACTTGGAACTTGTACTTCAGTGGAGTGCGTCTTTGTTTTCTGGCCAACATCGTAGAATTTCGTTTAATGGGGAACCCCCAAATGAGCTGCTGCTTTTGTTGTACATAATGTTGTTACAACAGGATGCATATGATAAGATTGATCTGGCTCTAGCAACCACGGGAAATTCCAATGGGCATATGGACGGCATTTTATCAGATAAAACTGAAAAATTGTCCGACATAACTGCTGAGTTCAGTGAAGCGGTGTTGTTGACAAATACTATTTGCAATGCTCTCTTGTCCCTTGCAGATATGCGGGAGAGCTTGTATGGTAAAAATTCAATAGAAGACGACATTGAAGCACTGAAGAGGTGTTGTAGTATAAAAGAGAAAAAGTTGTACCATTCGTTGATGCTTCGTATCAGTGAGAGGAGAATCATTCAGAAATTCAGAACATTTGCCACTTCCGGTTCCCAAGTTACAACTGGTGAACAAGCCTCTCCGAGAAAGAAGTTGAAACTAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rubis-subs-bind SET

Protein Analysis

338

Amino Acids

37.42

Weight (kDa)

4.68

Isoelectric Point (pI)

37.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 752, 805
AcoI YGGCCR 1 cut(s) 550
AcsI RAATTY 5 cut(s) 239, 564, 673, 826, 935
AcuI CTGAAG 3 cut(s) 381, 509, 875
AfaI GTAC 6 cut(s) 86, 295, 331, 522, 611, 890
AfiI CCNNNNNNNGG 1 cut(s) 320
AgsI TTSAA 5 cut(s) 211, 421, 831, 848, 1006
AhlI ACTAGT 1 cut(s) 290
AjnI CCWGG 1 cut(s) 87
AjuI GAANNNNNNNTTGG 2 cut(s) 494, 526
AluBI AGCT 6 cut(s) 66, 194, 347, 410, 595, 813
AluI AGCT 6 cut(s) 66, 194, 347, 410, 595, 813
Alw21I GWGCWC 1 cut(s) 207
Alw44I GTGCAC 1 cut(s) 203
AlwNI CAGNNNCTG 1 cut(s) 479
AoxI GGCC 1 cut(s) 550
ApaLI GTGCAC 1 cut(s) 203
ApeKI GCWGC 5 cut(s) 92, 191, 446, 595, 598
ApoI RAATTY 5 cut(s) 239, 564, 673, 826, 935
AspS9I GGNCC 2 cut(s) 40, 51
AsuHPI GGTGA 3 cut(s) 128, 380, 989
AvaII GGWCC 2 cut(s) 40, 51
BaeGI GKGCMC 1 cut(s) 207
BalI TGGCCA 1 cut(s) 552
BbsI GAAGAC 2 cut(s) 409, 843
Bbv12I GWGCWC 1 cut(s) 207
BbvCI CCTCAGC 2 cut(s) 195, 411
BbvI GCAGC 5 cut(s) 104, 203, 433, 582, 585
BccI CCATC 2 cut(s) 359, 373
BceAI ACGGC 2 cut(s) 445, 709
BcgI CGANNNNNNTGC 2 cut(s) 716, 750
BciT130I CCWGG 1 cut(s) 89
BclI TGATCA 1 cut(s) 133
BcuI ACTAGT 1 cut(s) 290
BfaI CTAG 5 cut(s) 114, 291, 327, 351, 659
BisI GCNGC 5 cut(s) 93, 192, 447, 596, 599
BlsI GCNGC 5 cut(s) 94, 193, 448, 597, 600
BmcAI AGTACT 1 cut(s) 331
Bme1390I CCNGG 1 cut(s) 89
Bme18I GGWCC 2 cut(s) 40, 51
BmgT120I GGNCC 2 cut(s) 40, 51
BmiI GGNNCC 5 cut(s) 52, 53, 159, 582, 961
BmrFI CCNGG 1 cut(s) 89
BmsI GCATC 3 cut(s) 230, 622, 891
BpiI GAAGAC 2 cut(s) 409, 843
Bpu10I CCTNAGC 2 cut(s) 195, 411
BsaJI CCNNGG 2 cut(s) 142, 666
BsaWI WCCGGW 1 cut(s) 956
BsaXI ACNNNNNCTCC 4 cut(s) 399, 429, 800, 830
Bsc4I CCNNNNNNNGG 1 cut(s) 320
Bse1I ACTGG 4 cut(s) 17, 303, 325, 979
Bse3DI GCAATG 4 cut(s) 32, 283, 448, 784
BseBI CCWGG 1 cut(s) 89
BseDI CCNNGG 2 cut(s) 142, 666
BseGI GGATG 2 cut(s) 205, 637
BseLI CCNNNNNNNGG 1 cut(s) 320
BseMI GCAATG 4 cut(s) 32, 283, 448, 784
BseMII CTCAG 3 cut(s) 186, 402, 729
BseNI ACTGG 4 cut(s) 17, 303, 325, 979
BseRI GAGGAG 2 cut(s) 95, 934
BseSI GKGCMC 1 cut(s) 207
BseXI GCAGC 5 cut(s) 104, 203, 433, 582, 585
BsgI GTGCAG 1 cut(s) 432
BshFI GGCC 1 cut(s) 552
BsiHKAI GWGCWC 1 cut(s) 207
BsiSI CCGG 1 cut(s) 957
BslFI GGGAC 2 cut(s) 64, 775
BslI CCNNNNNNNGG 1 cut(s) 320
BsmFI GGGAC 2 cut(s) 64, 775
BsnI GGCC 1 cut(s) 552
Bsp1286I GDGCHC 1 cut(s) 207
Bsp1407I TGTACA 1 cut(s) 609
Bsp143I GATC 2 cut(s) 133, 649
BspACI CCGC 2 cut(s) 752, 805
BspANI GGCC 1 cut(s) 552
BspCNI CTCAG 3 cut(s) 187, 403, 730
BspLI GGNNCC 5 cut(s) 52, 53, 159, 582, 961
BsrDI GCAATG 4 cut(s) 32, 283, 448, 784
BsrGI TGTACA 1 cut(s) 609
BsrI ACTGG 4 cut(s) 17, 303, 325, 979
BssECI CCNNGG 2 cut(s) 142, 666
BssMI GATC 2 cut(s) 133, 649
Bst2UI CCWGG 1 cut(s) 89
Bst4CI ACNGT 1 cut(s) 236
Bst6I CTCTTC 1 cut(s) 851
BstAUI TGTACA 1 cut(s) 609
BstDEI CTNAG 4 cut(s) 195, 308, 411, 738
BstDSI CCRYGG 2 cut(s) 142, 666
BstF5I GGATG 2 cut(s) 205, 637
BstKTI GATC 2 cut(s) 136, 652
BstMBI GATC 2 cut(s) 133, 649
BstMWI GCNNNNNNNGC 3 cut(s) 273, 353, 438
BstNI CCWGG 1 cut(s) 89
BstSCI CCNGG 1 cut(s) 87
BstSLI GKGCMC 1 cut(s) 207
BstV1I GCAGC 5 cut(s) 104, 203, 433, 582, 585
BstV2I GAAGAC 2 cut(s) 409, 843
BsuRI GGCC 1 cut(s) 552
BtgI CCRYGG 2 cut(s) 142, 666
BtsCI GGATG 2 cut(s) 205, 637
BtsIMutI CAGTG 5 cut(s) 241, 533, 751, 851, 919
CaiI CAGNNNCTG 1 cut(s) 479
Cfr13I GGNCC 2 cut(s) 40, 51
CseI GACGC 2 cut(s) 109, 525
Csp6I GTAC 6 cut(s) 85, 294, 330, 521, 610, 889
CviQI GTAC 6 cut(s) 85, 294, 330, 521, 610, 889
DdeI CTNAG 4 cut(s) 195, 308, 411, 738
DpnI GATC 2 cut(s) 135, 651
DpnII GATC 2 cut(s) 133, 649
EaeI YGGCCR 1 cut(s) 550
Eam1104I CTCTTC 1 cut(s) 851
EarI CTCTTC 1 cut(s) 851
Eco47I GGWCC 2 cut(s) 40, 51
Eco57I CTGAAG 3 cut(s) 381, 509, 875
EcoO109I RGGNCCY 1 cut(s) 51
EcoRI GAATTC 1 cut(s) 239
EcoRII CCWGG 1 cut(s) 87
EcoT22I ATGCAT 1 cut(s) 637
FaqI GGGAC 2 cut(s) 64, 775
FauI CCCGC 1 cut(s) 798
FauNDI CATATG 2 cut(s) 637, 687
FbaI TGATCA 1 cut(s) 133
Fnu4HI GCNGC 5 cut(s) 93, 192, 447, 596, 599
FokI GGATG 2 cut(s) 212, 644
Fsp4HI GCNGC 5 cut(s) 93, 192, 447, 596, 599
FspBI CTAG 5 cut(s) 114, 291, 327, 351, 659
GluI GCNGC 5 cut(s) 93, 192, 447, 596, 599
HaeIII GGCC 1 cut(s) 552
HapII CCGG 1 cut(s) 957
HgaI GACGC 2 cut(s) 109, 525
HincII GTYRAC 1 cut(s) 762
HindII GTYRAC 1 cut(s) 762
HinfI GANTC 3 cut(s) 147, 281, 924
HpaII CCGG 1 cut(s) 957
HphI GGTGA 3 cut(s) 128, 380, 989
Hpy166II GTNNAC 4 cut(s) 205, 471, 762, 980
Hpy188I TCNGA 7 cut(s) 126, 152, 706, 727, 933, 941, 993
Hpy8I GTNNAC 4 cut(s) 205, 471, 762, 980
HpyAV CCTTC 1 cut(s) 266
HpyCH4III ACNGT 1 cut(s) 236
HpyCH4V TGCA 8 cut(s) 37, 191, 205, 221, 449, 635, 777, 797
HpyF10VI GCNNNNNNNGC 3 cut(s) 273, 353, 438
HpyF3I CTNAG 4 cut(s) 195, 308, 411, 738
KflI GGGWCCC 1 cut(s) 51
Ksp22I TGATCA 1 cut(s) 133
Kzo9I GATC 2 cut(s) 133, 649
LmnI GCTCC 1 cut(s) 407
Lsp1109I GCAGC 5 cut(s) 104, 203, 433, 582, 585
LweI GCATC 3 cut(s) 230, 622, 891
MaeI CTAG 5 cut(s) 114, 291, 327, 351, 659
MaeIII GTNAC 2 cut(s) 621, 967
MalI GATC 2 cut(s) 135, 651
MboI GATC 2 cut(s) 133, 649
MboII GAAGA 6 cut(s) 281, 374, 409, 446, 848, 868
MhlI GDGCHC 1 cut(s) 207
MlsI TGGCCA 1 cut(s) 552
MluCI AATT 9 cut(s) 45, 56, 186, 239, 564, 673, 719, 826, 935
MluNI TGGCCA 1 cut(s) 552
MlyI GAGTC 1 cut(s) 156
MmeI TCCRAC 3 cut(s) 130, 385, 750
MnlI CCTC 7 cut(s) 73, 190, 226, 406, 852, 912, 997
Mox20I TGGCCA 1 cut(s) 552
Mph1103I ATGCAT 1 cut(s) 637
MscI TGGCCA 1 cut(s) 552
MseI TTAA 2 cut(s) 177, 573
MslI CAYNNNNRTG 1 cut(s) 462
Msp20I TGGCCA 1 cut(s) 552
MspA1I CMGCKG 1 cut(s) 194
MspI CCGG 1 cut(s) 957
MspR9I CCNGG 1 cut(s) 89
MvaI CCWGG 1 cut(s) 89
MwoI GCNNNNNNNGC 3 cut(s) 273, 353, 438
NdeI CATATG 2 cut(s) 637, 687
NdeII GATC 2 cut(s) 133, 649
NlaIV GGNNCC 5 cut(s) 52, 53, 159, 582, 961
NsiI ATGCAT 1 cut(s) 637
PfeI GAWTC 2 cut(s) 281, 924
PkrI GCNGC 5 cut(s) 94, 193, 448, 597, 600
PleI GAGTC 1 cut(s) 155
PpsI GAGTC 1 cut(s) 155
PpuMI RGGWCCY 1 cut(s) 51
Psp5II RGGWCCY 1 cut(s) 51
Psp6I CCWGG 1 cut(s) 87
PspGI CCWGG 1 cut(s) 87
PspN4I GGNNCC 5 cut(s) 52, 53, 159, 582, 961
PspPI GGNCC 2 cut(s) 40, 51
PspPPI RGGWCCY 1 cut(s) 51
PstNI CAGNNNCTG 1 cut(s) 479
PvuII CAGCTG 1 cut(s) 194
RsaI GTAC 6 cut(s) 86, 295, 331, 522, 611, 890
RsaNI GTAC 6 cut(s) 85, 294, 330, 521, 610, 889
RseI CAYNNNNRTG 1 cut(s) 462
SaqAI TTAA 2 cut(s) 177, 573
SatI GCNGC 5 cut(s) 93, 192, 447, 596, 599
Sau3AI GATC 2 cut(s) 133, 649
Sau96I GGNCC 2 cut(s) 40, 51
ScaI AGTACT 1 cut(s) 331
SchI GAGTC 1 cut(s) 156
ScrFI CCNGG 1 cut(s) 89
SduI GDGCHC 1 cut(s) 207
SfaNI GCATC 3 cut(s) 230, 622, 891
SinI GGWCC 2 cut(s) 40, 51
SmiMI CAYNNNNRTG 1 cut(s) 462
SpeI ACTAGT 1 cut(s) 290
Sse9I AATT 9 cut(s) 45, 56, 186, 239, 564, 673, 719, 826, 935
SsiI CCGC 2 cut(s) 752, 805
SspMI CTAG 5 cut(s) 114, 291, 327, 351, 659
StyD4I CCNGG 1 cut(s) 87
TaaI ACNGT 1 cut(s) 236
TaqI TCGA 2 cut(s) 243, 507
TasI AATT 9 cut(s) 45, 56, 186, 239, 564, 673, 719, 826, 935
TatI WGTACW 4 cut(s) 293, 329, 520, 609
TfiI GAWTC 2 cut(s) 281, 924
Tru1I TTAA 2 cut(s) 177, 573
Tru9I TTAA 2 cut(s) 177, 573
TscAI CASTG 5 cut(s) 241, 533, 751, 858, 919
TseI GCWGC 5 cut(s) 92, 191, 446, 595, 598
TspDTI ATGAA 2 cut(s) 294, 446
TspGWI ACGGA 1 cut(s) 159
TspRI CASTG 5 cut(s) 241, 533, 751, 858, 919
VneI GTGCAC 1 cut(s) 203
VpaK11BI GGWCC 2 cut(s) 40, 51
XapI RAATTY 5 cut(s) 239, 564, 673, 826, 935
XcmI CCANNNNNNNNNTGG 2 cut(s) 685, 971
XspI CTAG 5 cut(s) 114, 291, 327, 351, 659
ZrmI AGTACT 1 cut(s) 331
Zsp2I ATGCAT 1 cut(s) 637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.