Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0003800

Physical Location & Seq

Genomic Coordinates Reverse (-)

30678234 .. 30680100

Gene Structure 1867 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG295100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGGAAATGGCGGCTCGGCGCGTGAGGGCTTTCAAGCGCTGGATGAAGCGGGAAGGCATCCAATGCAGCGATGCCCTCGACTTGACCGTCTCCGCCACCCAAGGCCTCTCCATCACTGCCCTCGCCGACCTCCACGTCGGCGACGCCGTCGCCAGAATCCCCAAGGCCACGTGCCTCACCGTCATCACCACCGCGGCACGCGACATGATCGACGCGGCCGGCCTCGACGGCAGCCTGGGCCTCGCGGTGGCGATCATGCACGAGAGGAGCCTGGGGGAGCAGTCCCACTGGGCCCCGTACCTGGCGGTGTTGCCGGAGCAGGAGCCCATCCCGTTGGTCTGGACGGCGGAGGAGGCGGAGGAGCTGCTGAGAGGGACGGAGCTGGACGAGACGGTGAAGGAAGACAGAGGAGTGATGTTGGAGGACTGGAAAGAGAGCATTGAGCCATTGCAGGATCAAATTGGGACCCAATTTGAGAGCTTTTATGGGTTTGAGGAGTACCTGGCAGCAAGGACGCTGATTGCTTCTAGGTCTTTTCAGATTGATGATCACCACCACGGAGTCGGAATGGTTCCTTTGGCTGACATCTTTAATCACAAAACGGCAGCTGAGGATGTGCACTTGAACACCTCTGCATCTACTGAAGGCAGTGAATTCGACTCGACTGAAAATAGTGGTAGCGAAGAAGGCAATGAGTCTGCTAATGAATCTACTACTAGTACAACTTCCAGTGTGGGTCATACTACTGGTGCTAGTGCTAATGATGATGTAGCTTCTGGTGCTACTGATGATGATGGTGATGACGATGATTTGGAGATGGTTATGGTCAATGATGTCAAAGTTGGAGTCGAGGTGTTCAATACATACGGCTTATTGGGCAACGCTGCACTTCTTCATAGATATGGATTTACAGAGCCTGATAATCCATTTGACATTGTGAATATCGACTTGGAACTTGTACTTCAGTGGAGTGCATCTTTGTTTTCTGGCCAGCATCGTAGAGCGAGGCTATCTTTGTGGAGAAGATTAGGATACTCCGGATGTGCCAGCCAGAACTCGGAATATTTTGAGATTTCGTTTGATGGGGAACCCCCAAATGAGCTGCTACTTTTGTTGTACATGATGTTGTTGCAACAGGATGCATATGATAAGATTGATCTGGCTCTAGCAACCACGGGAAATTCCAATAGGCATATGGACGGCATTTTATCAGATAAAACTGAAAAATTGTCTGACATAACTGCTGAGTTCAGTGAAGCCGTGTTGTTGACAAATACTATTTGTAATGCTCTCTTGTCCCTTGCAGATATGCGGGAGAGCTTGTATGGTAAAAATTCAATAGAAGACGACATTGAAGCACTGAAGAGGTGTTGTAGTATAAAAGAGAAAAAGTTGTACCATTCGTTGATGCTTCGTATCAGTGAGAGGAGAATCATTCAGAAATTCAGAACATTTGCCACTTCCGGTTCCCAAATTAGAACTAGTGAACAAGCCTCTCCAAGAAAGAAGTTGAAACGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rubis-subs-bind SET

Protein Analysis

507

Amino Acids

56.08

Weight (kDa)

4.71

Isoelectric Point (pI)

43.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003800)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56570 AT3G56570
fragaria_vesca	FvH4_1g25860
malus_domestica	MD00G1030500.v1.1
prunus_persica	Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1
pyrus_communis	pycom520g01270
rosa_chinensis	RchiOBHm_Chr3g0485001
rosa_laevigata	RLG00000023178
rosa_multiflora	Rmu_sc0006040.1_g000023 Rmu_sc0008046.1_g000001 Rmu_sc0009462.1_g000004 Rmu_sc0013239.1_g000002 Rmu_sc0029923.1_g000001 Rmu_sc0034567.1_g000001
rosa_roxburghii	Rroxscaffold_6G00397270
rosa_rugosa	Rorug03G0215100
rosa_samantha	Rh3AG265400 Rh3BG300900 Rh3BG301000 Rh3CG298800 Rh3CG299300 Rh3DG294700 Rh3DG295100
rosa_wichuraiana	Rw0G006750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	86, 134
AccII	CGCG	5 cut(s)	21, 194, 201, 215, 245
AccIII	TCCGGA	1 cut(s)	1037
AclWI	GGATC	1 cut(s)	462
AcoI	YGGCCR	2 cut(s)	216, 988
AcsI	RAATTY	4 cut(s)	653, 1180, 1333, 1442
AcuI	CTGAAG	3 cut(s)	663, 947, 1382
AcvI	CACGTG	1 cut(s)	171
AcyI	GRCGYC	1 cut(s)	144
AfaI	GTAC	6 cut(s)	299, 500, 721, 960, 1118, 1397
AfeI	AGCGCT	1 cut(s)	38
AfiI	CCNNNNNNNGG	3 cut(s)	247, 301, 1057
AgsI	TTSAA	6 cut(s)	34, 625, 859, 1338, 1355, 1513
AhlI	ACTAGT	2 cut(s)	716, 1481
AjiI	CACGTC	1 cut(s)	136
AjnI	CCWGG	4 cut(s)	234, 270, 300, 501
AjuI	GAANNNNNNNTTGG	2 cut(s)	932, 964
AluBI	AGCT	7 cut(s)	364, 382, 480, 608, 773, 1102, 1320
AluI	AGCT	7 cut(s)	364, 382, 480, 608, 773, 1102, 1320
Alw21I	GWGCWC	1 cut(s)	621
Alw26I	GTCTC	2 cut(s)	94, 383
Alw44I	GTGCAC	1 cut(s)	617
AlwI	GGATC	1 cut(s)	462
AlwNI	CAGNNNCTG	1 cut(s)	917
Aor13HI	TCCGGA	1 cut(s)	1037
Aor51HI	AGCGCT	1 cut(s)	38
AoxI	GGCC	7 cut(s)	103, 165, 216, 220, 238, 291, 988
ApaI	GGGCCC	1 cut(s)	295
ApaLI	GTGCAC	1 cut(s)	617
ApeKI	GCWGC	7 cut(s)	66, 231, 364, 506, 605, 884, 1102
ApoI	RAATTY	4 cut(s)	653, 1180, 1333, 1442
ArsI	GACNNNNNNTTYG	2 cut(s)	831, 863
AspLEI	GCGC	2 cut(s)	21, 39
AspS9I	GGNCC	4 cut(s)	238, 291, 292, 465
AsuHPI	GGTGA	5 cut(s)	169, 178, 406, 542, 809
AvaII	GGWCC	1 cut(s)	465
BaeGI	GKGCMC	2 cut(s)	295, 621
BalI	TGGCCA	1 cut(s)	990
BanII	GRGCYC	2 cut(s)	295, 327
BauI	CACGAG	1 cut(s)	260
BbrPI	CACGTG	1 cut(s)	171
BbsI	GAAGAC	2 cut(s)	408, 1350
Bbv12I	GWGCWC	1 cut(s)	621
BbvCI	CCTCAGC	1 cut(s)	609
BbvI	GCAGC	7 cut(s)	78, 243, 351, 518, 617, 871, 1089
BccI	CCATC	5 cut(s)	119, 335, 788, 811, 1076
BceAI	ACGGC	7 cut(s)	131, 244, 360, 618, 883, 1216, 1244
BcgI	CGANNNNNNTGC	2 cut(s)	637, 671
BciT130I	CCWGG	4 cut(s)	236, 272, 302, 503
BciVI	GTATCC	1 cut(s)	1025
BclI	TGATCA	1 cut(s)	547
BcoDI	GTCTC	2 cut(s)	94, 383
BcuI	ACTAGT	2 cut(s)	716, 1481
BfaI	CTAG	5 cut(s)	528, 717, 753, 1166, 1482
BfoI	RGCGCY	1 cut(s)	40
BfuI	GTATCC	1 cut(s)	1025
BglI	GCCNNNNNGGC	1 cut(s)	228
Bme1390I	CCNGG	4 cut(s)	236, 272, 302, 503
Bme18I	GGWCC	1 cut(s)	465
BmgBI	CACGTC	1 cut(s)	136
BmgT120I	GGNCC	4 cut(s)	238, 291, 292, 465
BmiI	GGNNCC	9 cut(s)	269, 293, 294, 324, 466, 467, 573, 1089, 1468
BmrFI	CCNGG	4 cut(s)	236, 272, 302, 503
BmrI	ACTGGG	1 cut(s)	298
BmsI	GCATC	7 cut(s)	61, 66, 644, 983, 1003, 1129, 1398
BmuI	ACTGGG	1 cut(s)	298
BpiI	GAAGAC	2 cut(s)	408, 1350
Bpu10I	CCTNAGC	1 cut(s)	609
BsaAI	YACGTR	1 cut(s)	171
BsaHI	GRCGYC	1 cut(s)	144
BsaJI	CCNNGG	7 cut(s)	100, 162, 192, 235, 271, 556, 1173
BsaWI	WCCGGW	2 cut(s)	1037, 1463
BsaXI	ACNNNNNCTCC	4 cut(s)	837, 867, 1307, 1337
Bsc4I	CCNNNNNNNGG	3 cut(s)	247, 301, 1057
Bse118I	RCCGGY	1 cut(s)	218
Bse1I	ACTGG	4 cut(s)	293, 431, 729, 751
Bse3DI	GCAATG	2 cut(s)	446, 697
BseAI	TCCGGA	1 cut(s)	1037
BseBI	CCWGG	4 cut(s)	236, 272, 302, 503
BseDI	CCNNGG	7 cut(s)	100, 162, 192, 235, 271, 556, 1173
BseGI	GGATG	6 cut(s)	48, 57, 327, 619, 1046, 1144
BseLI	CCNNNNNNNGG	3 cut(s)	247, 301, 1057
BseMI	GCAATG	2 cut(s)	446, 697
BseMII	CTCAG	3 cut(s)	359, 600, 1236
BseNI	ACTGG	4 cut(s)	293, 431, 729, 751
BseRI	GAGGAG	6 cut(s)	280, 365, 374, 423, 509, 1441
BseSI	GKGCMC	2 cut(s)	295, 621
BseX3I	CGGCCG	1 cut(s)	216
BseXI	GCAGC	7 cut(s)	78, 243, 351, 518, 617, 871, 1089
BsgI	GTGCAG	1 cut(s)	870
Bsh1236I	CGCG	5 cut(s)	21, 194, 201, 215, 245
Bsh1285I	CGRYCG	1 cut(s)	219
BshFI	GGCC	7 cut(s)	105, 167, 218, 222, 240, 293, 990
BsiEI	CGRYCG	1 cut(s)	219
BsiHKAI	GWGCWC	1 cut(s)	621
BsiSI	CCGG	4 cut(s)	219, 314, 1038, 1464
BslFI	GGGAC	4 cut(s)	268, 388, 478, 1282
BslI	CCNNNNNNNGG	3 cut(s)	247, 301, 1057
BsmAI	GTCTC	2 cut(s)	94, 383
BsmBI	CGTCTC	2 cut(s)	94, 383
BsmFI	GGGAC	4 cut(s)	268, 388, 478, 1282
BsnI	GGCC	7 cut(s)	105, 167, 218, 222, 240, 293, 990
Bsp120I	GGGCCC	1 cut(s)	291
Bsp1286I	GDGCHC	3 cut(s)	295, 327, 621
Bsp13I	TCCGGA	1 cut(s)	1037
Bsp1407I	TGTACA	1 cut(s)	1116
Bsp143I	GATC	5 cut(s)	207, 252, 454, 547, 1156
BspANI	GGCC	7 cut(s)	105, 167, 218, 222, 240, 293, 990
BspCNI	CTCAG	3 cut(s)	360, 601, 1237
BspEI	TCCGGA	1 cut(s)	1037
BspFNI	CGCG	5 cut(s)	21, 194, 201, 215, 245
BspLI	GGNNCC	9 cut(s)	269, 293, 294, 324, 466, 467, 573, 1089, 1468
BspPI	GGATC	1 cut(s)	462
BsrDI	GCAATG	2 cut(s)	446, 697
BsrFI	RCCGGY	1 cut(s)	218
BsrGI	TGTACA	1 cut(s)	1116
BsrI	ACTGG	4 cut(s)	293, 431, 729, 751
BssAI	RCCGGY	1 cut(s)	218
BssECI	CCNNGG	7 cut(s)	100, 162, 192, 235, 271, 556, 1173
BssMI	GATC	5 cut(s)	207, 252, 454, 547, 1156
BssNI	GRCGYC	1 cut(s)	144
BssSI	CACGAG	1 cut(s)	260
BssT1I	CCWWGG	2 cut(s)	100, 162
Bst2BI	CACGAG	1 cut(s)	260
Bst2UI	CCWGG	4 cut(s)	236, 272, 302, 503
Bst4CI	ACNGT	3 cut(s)	88, 181, 394
Bst6I	CTCTTC	1 cut(s)	1358
BstACI	GRCGYC	1 cut(s)	144
BstAPI	GCANNNNNTGC	1 cut(s)	63
BstAUI	TGTACA	1 cut(s)	1116
BstBAI	YACGTR	1 cut(s)	171
BstC8I	GCNNGC	4 cut(s)	199, 220, 992, 1048
BstDEI	CTNAG	3 cut(s)	368, 609, 1245
BstDSI	CCRYGG	3 cut(s)	192, 556, 1173
BstF5I	GGATG	6 cut(s)	48, 57, 327, 619, 1046, 1144
BstFNI	CGCG	5 cut(s)	21, 194, 201, 215, 245
BstH2I	RGCGCY	1 cut(s)	40
BstHHI	GCGC	2 cut(s)	21, 39
BstKTI	GATC	5 cut(s)	210, 255, 457, 550, 1159
BstMAI	GTCTC	2 cut(s)	94, 383
BstMBI	GATC	5 cut(s)	207, 252, 454, 547, 1156
BstMCI	CGRYCG	1 cut(s)	219
BstMWI	GCNNNNNNNGC	7 cut(s)	63, 228, 237, 353, 687, 779, 876
BstNI	CCWGG	4 cut(s)	236, 272, 302, 503
BstSCI	CCNGG	4 cut(s)	234, 270, 300, 501
BstSLI	GKGCMC	2 cut(s)	295, 621
BstUI	CGCG	5 cut(s)	21, 194, 201, 215, 245
BstV1I	GCAGC	7 cut(s)	78, 243, 351, 518, 617, 871, 1089
BstV2I	GAAGAC	2 cut(s)	408, 1350
BstXI	CCANNNNNNTGG	1 cut(s)	334
BstZI	CGGCCG	1 cut(s)	216
BsuI	GTATCC	1 cut(s)	1025
BsuRI	GGCC	7 cut(s)	105, 167, 218, 222, 240, 293, 990
BtgI	CCRYGG	3 cut(s)	192, 556, 1173
BtgZI	GCGATG	1 cut(s)	84
BtrI	CACGTC	1 cut(s)	136
BtsCI	GGATG	6 cut(s)	48, 57, 327, 619, 1046, 1144
BtsI	GCAGTG	2 cut(s)	114, 655
BtsIMutI	CAGTG	8 cut(s)	114, 286, 655, 736, 971, 1258, 1358, 1426
Cac8I	GCNNGC	4 cut(s)	199, 220, 992, 1048
CaiI	CAGNNNCTG	1 cut(s)	917
CfoI	GCGC	2 cut(s)	21, 39
Cfr10I	RCCGGY	1 cut(s)	218
Cfr13I	GGNCC	4 cut(s)	238, 291, 292, 465
Cfr42I	CCGCGG	1 cut(s)	195
CseI	GACGC	3 cut(s)	152, 221, 523
Csp6I	GTAC	6 cut(s)	298, 499, 720, 959, 1117, 1396
CviAII	CATG	3 cut(s)	205, 256, 1120
CviQI	GTAC	6 cut(s)	298, 499, 720, 959, 1117, 1396
DdeI	CTNAG	3 cut(s)	368, 609, 1245
DpnI	GATC	5 cut(s)	209, 254, 456, 549, 1158
DpnII	GATC	5 cut(s)	207, 252, 454, 547, 1156
DrdI	GACNNNNNNGTC	2 cut(s)	86, 134
DseDI	GACNNNNNNGTC	2 cut(s)	86, 134
EaeI	YGGCCR	2 cut(s)	216, 988
EagI	CGGCCG	1 cut(s)	216
Eam1104I	CTCTTC	1 cut(s)	1358
EarI	CTCTTC	1 cut(s)	1358
EciI	GGCGGA	3 cut(s)	82, 362, 371
EclXI	CGGCCG	1 cut(s)	216
Eco130I	CCWWGG	2 cut(s)	100, 162
Eco147I	AGGCCT	1 cut(s)	105
Eco24I	GRGCYC	2 cut(s)	295, 327
Eco47I	GGWCC	1 cut(s)	465
Eco47III	AGCGCT	1 cut(s)	38
Eco52I	CGGCCG	1 cut(s)	216
Eco57I	CTGAAG	3 cut(s)	663, 947, 1382
Eco72I	CACGTG	1 cut(s)	171
EcoO109I	RGGNCCY	2 cut(s)	292, 465
EcoRI	GAATTC	1 cut(s)	653
EcoRII	CCWGG	4 cut(s)	234, 270, 300, 501
EcoT14I	CCWWGG	2 cut(s)	100, 162
EcoT22I	ATGCAT	1 cut(s)	1144
EcoT38I	GRGCYC	2 cut(s)	295, 327
ErhI	CCWWGG	2 cut(s)	100, 162
Esp3I	CGTCTC	2 cut(s)	94, 383
FaeI	CATG	3 cut(s)	208, 259, 1123
FaqI	GGGAC	4 cut(s)	268, 388, 478, 1282
FatI	CATG	3 cut(s)	204, 255, 1119
FauI	CCCGC	2 cut(s)	42, 1305
FauNDI	CATATG	2 cut(s)	1144, 1194
FbaI	TGATCA	1 cut(s)	547
FokI	GGATG	6 cut(s)	44, 55, 314, 626, 1053, 1151
FriOI	GRGCYC	2 cut(s)	295, 327
FseI	GGCCGGCC	1 cut(s)	222
FspBI	CTAG	5 cut(s)	528, 717, 753, 1166, 1482
GlaI	GCGC	2 cut(s)	20, 38
HaeII	RGCGCY	1 cut(s)	40
HaeIII	GGCC	7 cut(s)	105, 167, 218, 222, 240, 293, 990
HapII	CCGG	4 cut(s)	219, 314, 1038, 1464
HgaI	GACGC	3 cut(s)	152, 221, 523
HhaI	GCGC	2 cut(s)	21, 39
Hin1I	GRCGYC	1 cut(s)	144
Hin1II	CATG	3 cut(s)	208, 259, 1123
Hin6I	GCGC	2 cut(s)	19, 37
HinP1I	GCGC	2 cut(s)	19, 37
HincII	GTYRAC	1 cut(s)	1269
HindII	GTYRAC	1 cut(s)	1269
HinfI	GANTC	7 cut(s)	156, 561, 659, 695, 707, 846, 1431
HpaII	CCGG	4 cut(s)	219, 314, 1038, 1464
HphI	GGTGA	5 cut(s)	169, 178, 406, 542, 809
Hpy166II	GTNNAC	3 cut(s)	619, 1269, 1487
Hpy188I	TCNGA	7 cut(s)	540, 566, 1060, 1213, 1234, 1440, 1448
Hpy188III	TCNNGA	2 cut(s)	340, 1038
Hpy8I	GTNNAC	3 cut(s)	619, 1269, 1487
Hpy99I	CGWCG	5 cut(s)	140, 146, 152, 215, 230
HpyAV	CCTTC	4 cut(s)	47, 391, 638, 680
HpyCH4III	ACNGT	3 cut(s)	88, 181, 394
HpyCH4IV	ACGT	2 cut(s)	135, 170
HpyF10VI	GCNNNNNNNGC	7 cut(s)	63, 228, 237, 353, 687, 779, 876
HpyF3I	CTNAG	3 cut(s)	368, 609, 1245
HpySE526I	ACGT	2 cut(s)	135, 170
Hsp92I	GRCGYC	1 cut(s)	144
Hsp92II	CATG	3 cut(s)	208, 259, 1123
HspAI	GCGC	2 cut(s)	19, 37
KflI	GGGWCCC	1 cut(s)	465
Kpn2I	TCCGGA	1 cut(s)	1037
KroI	GCCGGC	1 cut(s)	218
KroNI	GCCGGC	1 cut(s)	220
Ksp22I	TGATCA	1 cut(s)	547
KspI	CCGCGG	1 cut(s)	195
Kzo9I	GATC	5 cut(s)	207, 252, 454, 547, 1156
LmnI	GCTCC	6 cut(s)	267, 277, 316, 322, 361, 379
Lsp1109I	GCAGC	7 cut(s)	78, 243, 351, 518, 617, 871, 1089
LweI	GCATC	7 cut(s)	61, 66, 644, 983, 1003, 1129, 1398
MaeI	CTAG	5 cut(s)	528, 717, 753, 1166, 1482
MaeII	ACGT	2 cut(s)	135, 170
MalI	GATC	5 cut(s)	209, 254, 456, 549, 1158
MboI	GATC	5 cut(s)	207, 252, 454, 547, 1156
MboII	GAAGA	6 cut(s)	413, 695, 884, 1035, 1355, 1375
MhlI	GDGCHC	3 cut(s)	295, 327, 621
MlsI	TGGCCA	1 cut(s)	990
MluCI	AATT	8 cut(s)	459, 470, 653, 1180, 1226, 1333, 1442, 1473
MluNI	TGGCCA	1 cut(s)	990
MlyI	GAGTC	4 cut(s)	570, 653, 704, 855
MmeI	TCCRAC	3 cut(s)	399, 544, 823
Mox20I	TGGCCA	1 cut(s)	990
Mph1103I	ATGCAT	1 cut(s)	1144
MroI	TCCGGA	1 cut(s)	1037
MroNI	GCCGGC	1 cut(s)	218
MscI	TGGCCA	1 cut(s)	990
MseI	TTAA	1 cut(s)	591
MslI	CAYNNNNRTG	1 cut(s)	900
Msp20I	TGGCCA	1 cut(s)	990
MspA1I	CMGCKG	2 cut(s)	194, 608
MspI	CCGG	4 cut(s)	219, 314, 1038, 1464
MspR9I	CCNGG	4 cut(s)	236, 272, 302, 503
MvaI	CCWGG	4 cut(s)	236, 272, 302, 503
MvnI	CGCG	5 cut(s)	21, 194, 201, 215, 245
MwoI	GCNNNNNNNGC	7 cut(s)	63, 228, 237, 353, 687, 779, 876
NaeI	GCCGGC	1 cut(s)	220
NdeI	CATATG	2 cut(s)	1144, 1194
NdeII	GATC	5 cut(s)	207, 252, 454, 547, 1156
NgoMIV	GCCGGC	1 cut(s)	218
NlaIII	CATG	3 cut(s)	208, 259, 1123
NlaIV	GGNNCC	9 cut(s)	269, 293, 294, 324, 466, 467, 573, 1089, 1468
NsiI	ATGCAT	1 cut(s)	1144
PceI	AGGCCT	1 cut(s)	105
PcsI	WCGNNNNNNNCGW	2 cut(s)	84, 144
PdiI	GCCGGC	1 cut(s)	220
PfeI	GAWTC	3 cut(s)	156, 707, 1431
PflFI	GACNNNGTC	1 cut(s)	146
PleI	GAGTC	4 cut(s)	569, 653, 703, 854
PmaCI	CACGTG	1 cut(s)	171
PmlI	CACGTG	1 cut(s)	171
PpsI	GAGTC	4 cut(s)	569, 653, 703, 854
Ppu21I	YACGTR	1 cut(s)	171
PpuMI	RGGWCCY	1 cut(s)	465
Psp5II	RGGWCCY	1 cut(s)	465
Psp6I	CCWGG	4 cut(s)	234, 270, 300, 501
PspCI	CACGTG	1 cut(s)	171
PspGI	CCWGG	4 cut(s)	234, 270, 300, 501
PspN4I	GGNNCC	9 cut(s)	269, 293, 294, 324, 466, 467, 573, 1089, 1468
PspOMI	GGGCCC	1 cut(s)	291
PspPI	GGNCC	4 cut(s)	238, 291, 292, 465
PspPPI	RGGWCCY	1 cut(s)	465
PstNI	CAGNNNCTG	1 cut(s)	917
PsyI	GACNNNGTC	1 cut(s)	146
PvuII	CAGCTG	1 cut(s)	608
RigI	GGCCGGCC	1 cut(s)	222
RsaI	GTAC	6 cut(s)	299, 500, 721, 960, 1118, 1397
RsaNI	GTAC	6 cut(s)	298, 499, 720, 959, 1117, 1396
RseI	CAYNNNNRTG	1 cut(s)	900
SacII	CCGCGG	1 cut(s)	195
SaqAI	TTAA	1 cut(s)	591
Sau3AI	GATC	5 cut(s)	207, 252, 454, 547, 1156
Sau96I	GGNCC	4 cut(s)	238, 291, 292, 465
SchI	GAGTC	4 cut(s)	570, 653, 704, 855
ScrFI	CCNGG	4 cut(s)	236, 272, 302, 503
SduI	GDGCHC	3 cut(s)	295, 327, 621
SfaNI	GCATC	7 cut(s)	61, 66, 644, 983, 1003, 1129, 1398
Sfr303I	CCGCGG	1 cut(s)	195
SgrBI	CCGCGG	1 cut(s)	195
SinI	GGWCC	1 cut(s)	465
SmiMI	CAYNNNNRTG	1 cut(s)	900
SpeI	ACTAGT	2 cut(s)	716, 1481
Sse9I	AATT	8 cut(s)	459, 470, 653, 1180, 1226, 1333, 1442, 1473
SseBI	AGGCCT	1 cut(s)	105
SspI	AATATT	1 cut(s)	1064
SspMI	CTAG	5 cut(s)	528, 717, 753, 1166, 1482
StuI	AGGCCT	1 cut(s)	105
StyD4I	CCNGG	4 cut(s)	234, 270, 300, 501
StyI	CCWWGG	2 cut(s)	100, 162
TaaI	ACNGT	3 cut(s)	88, 181, 394
TaiI	ACGT	2 cut(s)	138, 173
TaqI	TCGA	7 cut(s)	78, 210, 225, 657, 662, 849, 945
TasI	AATT	8 cut(s)	459, 470, 653, 1180, 1226, 1333, 1442, 1473
TatI	WGTACW	3 cut(s)	719, 958, 1116
TauI	GCSGC	3 cut(s)	14, 197, 218
TfiI	GAWTC	3 cut(s)	156, 707, 1431
Tru1I	TTAA	1 cut(s)	591
Tru9I	TTAA	1 cut(s)	591
TscAI	CASTG	8 cut(s)	121, 293, 655, 736, 971, 1258, 1365, 1426
TseI	GCWGC	7 cut(s)	66, 231, 364, 506, 605, 884, 1102
TspDTI	ATGAA	3 cut(s)	59, 720, 884
TspGWI	ACGGA	2 cut(s)	392, 573
TspRI	CASTG	8 cut(s)	121, 293, 655, 736, 971, 1258, 1365, 1426
Tth111I	GACNNNGTC	1 cut(s)	146
VneI	GTGCAC	1 cut(s)	617
VpaK11BI	GGWCC	1 cut(s)	465
XapI	RAATTY	4 cut(s)	653, 1180, 1333, 1442
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1192
XspI	CTAG	5 cut(s)	528, 717, 753, 1166, 1482
Zsp2I	ATGCAT	1 cut(s)	1144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.