Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0003800

Physical Location & Seq

Genomic Coordinates Forward (+)

18939203 .. 18942149

Gene Structure 2947 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00397270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGGAAATGGCGGCTCGGCGCGTGAGGGCTTTCAAGCGCTGGATGAAGCGGGAAGGCATCCAATGCAGCGACGCCCTCGACTTGACCGTCTCTGCCACCCAAGGCCTCTCCATCACTGCCCTCGCCGACCTCCACGTCGGCGACGCCGTCGCCAGAATCCCCAAGGCCACGTGCCTCACCGTCATCACCACCGCCGCACGCGACATGATCGACGCCGCCGGCCTCGACGGCAGCCTGGGCCTCGCGGTGGCGATCATGCACGAGAGGAGCCTGGGGGAGCAGTCCCACTGGGCCCCGTACCTGGCGGTGTTGCCGGAGCAGGAGCCCATTCCGTTGGTCTGGACGGCGGAGGAGGCGGAGGAGCTGCTGAGGGGGACGGAGCTGCACGGCACGATTGATGATCACTACCACGGCGTCGGAATGGTTCCTTTGGCTGACATCTTTAATCACAAAACGGGAGCTGAGGATGTGCACTTGAACACCTCTGCATCTACTGAAAACAGTGAATTCGACCCGACTGAAAATAGTGGTAGCGAAGAAGGCAATGAGTCTGCTAGTGAATCTACTACTAGTACAACTTCCAGTGTGGGTCATACTACTGGTGCTAGTACTAATGATGATGTAGCTTCTGGTGCTACTGATGATGATGGTGATGACGACGATTTGGAGATGGTTATGGTCAATGATGTCAAAGTTGGAGCCGAGGTGTTCAATACATACGGCTTATTGGGCAACGCTGCACTTCTTCATAGATATGGATTTACAGAGCCTGATAATCCATTTGACATTGTGAATATCGACTTGGAACTTGTACTTCAGTGGAGTGCATCTTTGTTTTCTGGCCAGCATCGTAGAGCGAGGCTATCTTTGTGGAGAAGATTAGGATACTCCGGATGTGCCAGCCAGAACTCGGAATATTTTGAGATTTCGTTTAATGGGGAACCCCCAAATGAGCTGCTGCTTTTGTTGTACATGATGTTGTTACAACAGGATGCATATGATCAGATTGATCTGGCTCTAGCAACCACGGGAAATTCCAGTAGGCATATGGACGGCATTTTATCAGATAAAACTGAAAAATTGTCTGAGATAACTGCTGAGTTCAGTGAAGCCGTGTTGTTGACAAATACTATTTGTAATGCTCTCTTGTCCCTTGCAGATATGCGGGAGAGCTTGTATGGTAAAAATTCAATAGAAGACGACATTGAAGCACTGAAGAGGTGTTGTAGTATAAAAGAGAAAAAGTTGTACCATTCGTTGATGCTTCGTATCAGTGAGAGGAGAATCATTCAGAAATTCAGAACATTTGCCACTTCCGGTTCCCAAGTTAGAACTGGTGAACAAGCCTCTCCAAGAAAGAAGCATTTTCTTGGCGCAATTTCCTCTCCAATTCAAGGTGTGGAATACACAATGCTGCTGTGCTGCTATAAAAGTGACATTTTGCAAATGAGTTCTTTATGCCCAGAAGGGTTTAGGAGCTGCCTTCTCAGATGGTCCATCCAGAGTGTGGGAGTACTTATGCTCCTTTTGCATTTACCTGCTACCAGTAGAAAAGAGAACAGCTGGAAGAGTGGTGTAGGAGGAACTGAGGATAGAACTAAACTCTATGCTTGCACCCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rubis-subs-bind SET

Protein Analysis

540

Amino Acids

59.28

Weight (kDa)

4.9

Isoelectric Point (pI)

47.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003800)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56570 AT3G56570
fragaria_vesca	FvH4_1g25860
malus_domestica	MD00G1030500.v1.1
prunus_persica	Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1 Prupe.4G288100_v2.0.a1
pyrus_communis	pycom520g01270
rosa_chinensis	RchiOBHm_Chr3g0485001
rosa_laevigata	RLG00000023178
rosa_multiflora	Rmu_sc0006040.1_g000023 Rmu_sc0008046.1_g000001 Rmu_sc0009462.1_g000004 Rmu_sc0013239.1_g000002 Rmu_sc0029923.1_g000001 Rmu_sc0034567.1_g000001
rosa_roxburghii	Rroxscaffold_6G00397270
rosa_rugosa	Rorug03G0215100
rosa_samantha	Rh3AG265400 Rh3BG300900 Rh3BG301000 Rh3CG298800 Rh3CG299300 Rh3DG294700 Rh3DG295100
rosa_wichuraiana	Rw0G006750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	86, 134
Acc36I	ACCTGC	1 cut(s)	1546
AccB7I	CCANNNNNTGG	1 cut(s)	1507
AccII	CGCG	3 cut(s)	21, 201, 245
AccIII	TCCGGA	1 cut(s)	890
AcoI	YGGCCR	1 cut(s)	841
AcsI	RAATTY	4 cut(s)	506, 1033, 1186, 1295
AcuI	CTGAAG	2 cut(s)	800, 1235
AcvI	CACGTG	1 cut(s)	171
AcyI	GRCGYC	4 cut(s)	72, 144, 213, 414
AfaI	GTAC	7 cut(s)	299, 574, 610, 813, 971, 1250, 1515
AfeI	AGCGCT	1 cut(s)	38
AfiI	CCNNNNNNNGG	5 cut(s)	247, 301, 910, 1394, 1507
AgsI	TTSAA	6 cut(s)	34, 478, 712, 1191, 1208, 1394
AhlI	ACTAGT	1 cut(s)	569
AjiI	CACGTC	1 cut(s)	136
AjnI	CCWGG	3 cut(s)	234, 270, 300
AjuI	GAANNNNNNNTTGG	2 cut(s)	785, 817
AluBI	AGCT	8 cut(s)	364, 382, 461, 626, 955, 1173, 1479, 1563
AluI	AGCT	8 cut(s)	364, 382, 461, 626, 955, 1173, 1479, 1563
Alw21I	GWGCWC	1 cut(s)	474
Alw26I	GTCTC	1 cut(s)	94
Alw44I	GTGCAC	1 cut(s)	470
AlwNI	CAGNNNCTG	1 cut(s)	770
Aor13HI	TCCGGA	1 cut(s)	890
Aor51HI	AGCGCT	1 cut(s)	38
AoxI	GGCC	6 cut(s)	103, 165, 220, 238, 291, 841
ApaI	GGGCCC	1 cut(s)	295
ApaLI	GTGCAC	1 cut(s)	470
ApoI	RAATTY	4 cut(s)	506, 1033, 1186, 1295
AspLEI	GCGC	3 cut(s)	21, 39, 1376
AspS9I	GGNCC	4 cut(s)	238, 291, 292, 1494
AsuHPI	GGTGA	4 cut(s)	169, 178, 662, 1349
AvaII	GGWCC	1 cut(s)	1494
BaeGI	GKGCMC	2 cut(s)	295, 474
BalI	TGGCCA	1 cut(s)	843
BanII	GRGCYC	2 cut(s)	295, 327
BauI	CACGAG	1 cut(s)	260
BbrPI	CACGTG	1 cut(s)	171
BbsI	GAAGAC	1 cut(s)	1203
Bbv12I	GWGCWC	1 cut(s)	474
BbvCI	CCTCAGC	2 cut(s)	368, 462
BccI	CCATC	5 cut(s)	119, 641, 664, 1485, 1505
BceAI	ACGGC	8 cut(s)	131, 244, 360, 403, 427, 736, 1069, 1097
BciT130I	CCWGG	3 cut(s)	236, 272, 302
BciVI	GTATCC	1 cut(s)	878
BclI	TGATCA	2 cut(s)	400, 1000
BcoDI	GTCTC	1 cut(s)	94
BcuI	ACTAGT	1 cut(s)	569
BfaI	CTAG	4 cut(s)	555, 570, 606, 1019
BfoI	RGCGCY	1 cut(s)	40
BfuAI	ACCTGC	1 cut(s)	1546
BfuI	GTATCC	1 cut(s)	878
BglI	GCCNNNNNGGC	1 cut(s)	228
BmcAI	AGTACT	2 cut(s)	610, 1515
Bme1390I	CCNGG	3 cut(s)	236, 272, 302
Bme18I	GGWCC	1 cut(s)	1494
BmgBI	CACGTC	1 cut(s)	136
BmgT120I	GGNCC	4 cut(s)	238, 291, 292, 1494
BmiI	GGNNCC	8 cut(s)	269, 293, 294, 324, 426, 700, 942, 1321
BmrFI	CCNGG	3 cut(s)	236, 272, 302
BmrI	ACTGGG	1 cut(s)	298
BmsI	GCATC	6 cut(s)	66, 497, 836, 856, 982, 1251
BmuI	ACTGGG	1 cut(s)	298
BpiI	GAAGAC	1 cut(s)	1203
Bpu10I	CCTNAGC	2 cut(s)	368, 462
BsaAI	YACGTR	1 cut(s)	171
BsaHI	GRCGYC	4 cut(s)	72, 144, 213, 414
BsaJI	CCNNGG	7 cut(s)	100, 162, 235, 271, 409, 702, 1026
BsaWI	WCCGGW	2 cut(s)	890, 1316
BsaXI	ACNNNNNCTCC	6 cut(s)	690, 720, 1160, 1190, 1506, 1536
Bsc4I	CCNNNNNNNGG	5 cut(s)	247, 301, 910, 1394, 1507
Bse118I	RCCGGY	1 cut(s)	218
Bse1I	ACTGG	6 cut(s)	293, 582, 604, 1038, 1339, 1545
Bse3DI	GCAATG	1 cut(s)	550
BseAI	TCCGGA	1 cut(s)	890
BseBI	CCWGG	3 cut(s)	236, 272, 302
BseDI	CCNNGG	7 cut(s)	100, 162, 235, 271, 409, 702, 1026
BseGI	GGATG	6 cut(s)	48, 57, 472, 899, 997, 1497
BseLI	CCNNNNNNNGG	5 cut(s)	247, 301, 910, 1394, 1507
BseMI	GCAATG	1 cut(s)	550
BseMII	CTCAG	6 cut(s)	359, 453, 1077, 1089, 1501, 1578
BseNI	ACTGG	6 cut(s)	293, 582, 604, 1038, 1339, 1545
BseRI	GAGGAG	4 cut(s)	280, 365, 374, 1294
BseSI	GKGCMC	2 cut(s)	295, 474
BsgI	GTGCAG	2 cut(s)	368, 723
Bsh1236I	CGCG	3 cut(s)	21, 201, 245
BshFI	GGCC	6 cut(s)	105, 167, 222, 240, 293, 843
BsiHKAI	GWGCWC	1 cut(s)	474
BsiSI	CCGG	4 cut(s)	219, 314, 891, 1317
BslFI	GGGAC	3 cut(s)	268, 388, 1135
BslI	CCNNNNNNNGG	5 cut(s)	247, 301, 910, 1394, 1507
BsmAI	GTCTC	1 cut(s)	94
BsmBI	CGTCTC	1 cut(s)	94
BsmFI	GGGAC	3 cut(s)	268, 388, 1135
BsnI	GGCC	6 cut(s)	105, 167, 222, 240, 293, 843
Bsp120I	GGGCCC	1 cut(s)	291
Bsp1286I	GDGCHC	3 cut(s)	295, 327, 474
Bsp13I	TCCGGA	1 cut(s)	890
Bsp1407I	TGTACA	1 cut(s)	969
Bsp143I	GATC	5 cut(s)	207, 252, 400, 1000, 1009
BspANI	GGCC	6 cut(s)	105, 167, 222, 240, 293, 843
BspCNI	CTCAG	6 cut(s)	360, 454, 1078, 1090, 1500, 1579
BspEI	TCCGGA	1 cut(s)	890
BspFNI	CGCG	3 cut(s)	21, 201, 245
BspLI	GGNNCC	8 cut(s)	269, 293, 294, 324, 426, 700, 942, 1321
BspMI	ACCTGC	1 cut(s)	1546
BsrDI	GCAATG	1 cut(s)	550
BsrFI	RCCGGY	1 cut(s)	218
BsrGI	TGTACA	1 cut(s)	969
BsrI	ACTGG	6 cut(s)	293, 582, 604, 1038, 1339, 1545
BssAI	RCCGGY	1 cut(s)	218
BssECI	CCNNGG	7 cut(s)	100, 162, 235, 271, 409, 702, 1026
BssMI	GATC	5 cut(s)	207, 252, 400, 1000, 1009
BssNI	GRCGYC	4 cut(s)	72, 144, 213, 414
BssSI	CACGAG	1 cut(s)	260
BssT1I	CCWWGG	2 cut(s)	100, 162
Bst2BI	CACGAG	1 cut(s)	260
Bst2UI	CCWGG	3 cut(s)	236, 272, 302
Bst4CI	ACNGT	3 cut(s)	88, 181, 503
Bst6I	CTCTTC	2 cut(s)	1211, 1562
BstACI	GRCGYC	4 cut(s)	72, 144, 213, 414
BstAPI	GCANNNNNTGC	1 cut(s)	63
BstAUI	TGTACA	1 cut(s)	969
BstBAI	YACGTR	1 cut(s)	171
BstC8I	GCNNGC	5 cut(s)	199, 220, 845, 901, 1612
BstDEI	CTNAG	6 cut(s)	368, 462, 1086, 1098, 1487, 1587
BstDSI	CCRYGG	2 cut(s)	409, 1026
BstF5I	GGATG	6 cut(s)	48, 57, 472, 899, 997, 1497
BstFNI	CGCG	3 cut(s)	21, 201, 245
BstH2I	RGCGCY	1 cut(s)	40
BstHHI	GCGC	3 cut(s)	21, 39, 1376
BstKTI	GATC	5 cut(s)	210, 255, 403, 1003, 1012
BstMAI	GTCTC	1 cut(s)	94
BstMBI	GATC	5 cut(s)	207, 252, 400, 1000, 1009
BstMWI	GCNNNNNNNGC	8 cut(s)	63, 228, 237, 353, 540, 632, 729, 1528
BstNI	CCWGG	3 cut(s)	236, 272, 302
BstSCI	CCNGG	3 cut(s)	234, 270, 300
BstSLI	GKGCMC	2 cut(s)	295, 474
BstUI	CGCG	3 cut(s)	21, 201, 245
BstV2I	GAAGAC	1 cut(s)	1203
BstXI	CCANNNNNNTGG	1 cut(s)	334
BsuI	GTATCC	1 cut(s)	878
BsuRI	GGCC	6 cut(s)	105, 167, 222, 240, 293, 843
BtgI	CCRYGG	2 cut(s)	409, 1026
BtrI	CACGTC	1 cut(s)	136
BtsCI	GGATG	6 cut(s)	48, 57, 472, 899, 997, 1497
BtsI	GCAGTG	1 cut(s)	114
BtsIMutI	CAGTG	8 cut(s)	114, 286, 508, 589, 824, 1111, 1211, 1279
BveI	ACCTGC	1 cut(s)	1546
Cac8I	GCNNGC	5 cut(s)	199, 220, 845, 901, 1612
CaiI	CAGNNNCTG	1 cut(s)	770
CfoI	GCGC	3 cut(s)	21, 39, 1376
Cfr10I	RCCGGY	1 cut(s)	218
Cfr13I	GGNCC	4 cut(s)	238, 291, 292, 1494
CseI	GACGC	4 cut(s)	80, 152, 221, 403
Csp6I	GTAC	7 cut(s)	298, 573, 609, 812, 970, 1249, 1514
CviAII	CATG	3 cut(s)	205, 256, 973
CviQI	GTAC	7 cut(s)	298, 573, 609, 812, 970, 1249, 1514
DdeI	CTNAG	6 cut(s)	368, 462, 1086, 1098, 1487, 1587
DpnI	GATC	5 cut(s)	209, 254, 402, 1002, 1011
DpnII	GATC	5 cut(s)	207, 252, 400, 1000, 1009
DrdI	GACNNNNNNGTC	2 cut(s)	86, 134
DseDI	GACNNNNNNGTC	2 cut(s)	86, 134
EaeI	YGGCCR	1 cut(s)	841
Eam1104I	CTCTTC	2 cut(s)	1211, 1562
EarI	CTCTTC	2 cut(s)	1211, 1562
EciI	GGCGGA	2 cut(s)	362, 371
Eco130I	CCWWGG	2 cut(s)	100, 162
Eco147I	AGGCCT	1 cut(s)	105
Eco24I	GRGCYC	2 cut(s)	295, 327
Eco47I	GGWCC	1 cut(s)	1494
Eco47III	AGCGCT	1 cut(s)	38
Eco57I	CTGAAG	2 cut(s)	800, 1235
Eco72I	CACGTG	1 cut(s)	171
EcoO109I	RGGNCCY	1 cut(s)	292
EcoRI	GAATTC	1 cut(s)	506
EcoRII	CCWGG	3 cut(s)	234, 270, 300
EcoT14I	CCWWGG	2 cut(s)	100, 162
EcoT22I	ATGCAT	1 cut(s)	997
EcoT38I	GRGCYC	2 cut(s)	295, 327
ErhI	CCWWGG	2 cut(s)	100, 162
Esp3I	CGTCTC	1 cut(s)	94
FaeI	CATG	3 cut(s)	208, 259, 976
FaqI	GGGAC	3 cut(s)	268, 388, 1135
FatI	CATG	3 cut(s)	204, 255, 972
FauI	CCCGC	2 cut(s)	42, 1158
FauNDI	CATATG	2 cut(s)	997, 1047
FbaI	TGATCA	2 cut(s)	400, 1000
FokI	GGATG	6 cut(s)	44, 55, 479, 906, 1004, 1484
FriOI	GRGCYC	2 cut(s)	295, 327
FspBI	CTAG	4 cut(s)	555, 570, 606, 1019
GlaI	GCGC	3 cut(s)	20, 38, 1375
HaeII	RGCGCY	1 cut(s)	40
HaeIII	GGCC	6 cut(s)	105, 167, 222, 240, 293, 843
HapII	CCGG	4 cut(s)	219, 314, 891, 1317
HgaI	GACGC	4 cut(s)	80, 152, 221, 403
HhaI	GCGC	3 cut(s)	21, 39, 1376
Hin1I	GRCGYC	4 cut(s)	72, 144, 213, 414
Hin1II	CATG	3 cut(s)	208, 259, 976
Hin6I	GCGC	3 cut(s)	19, 37, 1374
HinP1I	GCGC	3 cut(s)	19, 37, 1374
HincII	GTYRAC	1 cut(s)	1122
HindII	GTYRAC	1 cut(s)	1122
HinfI	GANTC	4 cut(s)	156, 548, 560, 1284
HpaII	CCGG	4 cut(s)	219, 314, 891, 1317
HphI	GGTGA	4 cut(s)	169, 178, 662, 1349
Hpy166II	GTNNAC	3 cut(s)	472, 1122, 1340
Hpy188I	TCNGA	9 cut(s)	419, 913, 1005, 1066, 1087, 1293, 1301, 1490, 1622
Hpy188III	TCNNGA	3 cut(s)	340, 891, 1501
Hpy8I	GTNNAC	3 cut(s)	472, 1122, 1340
Hpy99I	CGWCG	8 cut(s)	74, 140, 146, 152, 215, 230, 419, 662
HpyAV	CCTTC	4 cut(s)	47, 533, 1460, 1493
HpyCH4III	ACNGT	3 cut(s)	88, 181, 503
HpyCH4IV	ACGT	2 cut(s)	135, 170
HpyF10VI	GCNNNNNNNGC	8 cut(s)	63, 228, 237, 353, 540, 632, 729, 1528
HpyF3I	CTNAG	6 cut(s)	368, 462, 1086, 1098, 1487, 1587
HpySE526I	ACGT	2 cut(s)	135, 170
Hsp92I	GRCGYC	4 cut(s)	72, 144, 213, 414
Hsp92II	CATG	3 cut(s)	208, 259, 976
HspAI	GCGC	3 cut(s)	19, 37, 1374
Kpn2I	TCCGGA	1 cut(s)	890
KroI	GCCGGC	1 cut(s)	218
KroNI	GCCGGC	1 cut(s)	220
Ksp22I	TGATCA	2 cut(s)	400, 1000
Kzo9I	GATC	5 cut(s)	207, 252, 400, 1000, 1009
LweI	GCATC	6 cut(s)	66, 497, 836, 856, 982, 1251
MaeI	CTAG	4 cut(s)	555, 570, 606, 1019
MaeII	ACGT	2 cut(s)	135, 170
MaeIII	GTNAC	2 cut(s)	981, 1433
MalI	GATC	5 cut(s)	209, 254, 402, 1002, 1011
MboI	GATC	5 cut(s)	207, 252, 400, 1000, 1009
MboII	GAAGA	6 cut(s)	548, 737, 888, 1208, 1228, 1579
MhlI	GDGCHC	3 cut(s)	295, 327, 474
MlsI	TGGCCA	1 cut(s)	843
MluCI	AATT	7 cut(s)	506, 1033, 1079, 1186, 1295, 1377, 1389
MluNI	TGGCCA	1 cut(s)	843
MlyI	GAGTC	1 cut(s)	557
MmeI	TCCRAC	2 cut(s)	397, 676
Mox20I	TGGCCA	1 cut(s)	843
Mph1103I	ATGCAT	1 cut(s)	997
MroI	TCCGGA	1 cut(s)	890
MroNI	GCCGGC	1 cut(s)	218
MscI	TGGCCA	1 cut(s)	843
MseI	TTAA	2 cut(s)	444, 933
MslI	CAYNNNNRTG	1 cut(s)	753
Msp20I	TGGCCA	1 cut(s)	843
MspA1I	CMGCKG	1 cut(s)	1563
MspI	CCGG	4 cut(s)	219, 314, 891, 1317
MspR9I	CCNGG	3 cut(s)	236, 272, 302
MvaI	CCWGG	3 cut(s)	236, 272, 302
MvnI	CGCG	3 cut(s)	21, 201, 245
MwoI	GCNNNNNNNGC	8 cut(s)	63, 228, 237, 353, 540, 632, 729, 1528
NaeI	GCCGGC	1 cut(s)	220
NdeI	CATATG	2 cut(s)	997, 1047
NdeII	GATC	5 cut(s)	207, 252, 400, 1000, 1009
NgoMIV	GCCGGC	1 cut(s)	218
NlaIII	CATG	3 cut(s)	208, 259, 976
NlaIV	GGNNCC	8 cut(s)	269, 293, 294, 324, 426, 700, 942, 1321
NmeAIII	GCCGAG	1 cut(s)	727
NmuCI	GTSAC	1 cut(s)	1433
NsiI	ATGCAT	1 cut(s)	997
PceI	AGGCCT	1 cut(s)	105
PcsI	WCGNNNNNNNCGW	2 cut(s)	84, 144
PdiI	GCCGGC	1 cut(s)	220
PfeI	GAWTC	3 cut(s)	156, 560, 1284
PflFI	GACNNNGTC	1 cut(s)	146
PflMI	CCANNNNNTGG	1 cut(s)	1507
PleI	GAGTC	1 cut(s)	556
PmaCI	CACGTG	1 cut(s)	171
PmlI	CACGTG	1 cut(s)	171
PpsI	GAGTC	1 cut(s)	556
Ppu21I	YACGTR	1 cut(s)	171
Psp6I	CCWGG	3 cut(s)	234, 270, 300
PspCI	CACGTG	1 cut(s)	171
PspGI	CCWGG	3 cut(s)	234, 270, 300
PspN4I	GGNNCC	8 cut(s)	269, 293, 294, 324, 426, 700, 942, 1321
PspOMI	GGGCCC	1 cut(s)	291
PspPI	GGNCC	4 cut(s)	238, 291, 292, 1494
PstNI	CAGNNNCTG	1 cut(s)	770
PsyI	GACNNNGTC	1 cut(s)	146
PvuII	CAGCTG	1 cut(s)	1563
RsaI	GTAC	7 cut(s)	299, 574, 610, 813, 971, 1250, 1515
RsaNI	GTAC	7 cut(s)	298, 573, 609, 812, 970, 1249, 1514
RseI	CAYNNNNRTG	1 cut(s)	753
SaqAI	TTAA	2 cut(s)	444, 933
Sau3AI	GATC	5 cut(s)	207, 252, 400, 1000, 1009
Sau96I	GGNCC	4 cut(s)	238, 291, 292, 1494
ScaI	AGTACT	2 cut(s)	610, 1515
SchI	GAGTC	1 cut(s)	557
ScrFI	CCNGG	3 cut(s)	236, 272, 302
SduI	GDGCHC	3 cut(s)	295, 327, 474
SfaNI	GCATC	6 cut(s)	66, 497, 836, 856, 982, 1251
SinI	GGWCC	1 cut(s)	1494
SmiMI	CAYNNNNRTG	1 cut(s)	753
SpeI	ACTAGT	1 cut(s)	569
Sse9I	AATT	7 cut(s)	506, 1033, 1079, 1186, 1295, 1377, 1389
SseBI	AGGCCT	1 cut(s)	105
SspI	AATATT	1 cut(s)	917
SspMI	CTAG	4 cut(s)	555, 570, 606, 1019
StuI	AGGCCT	1 cut(s)	105
StyD4I	CCNGG	3 cut(s)	234, 270, 300
StyI	CCWWGG	2 cut(s)	100, 162
TaaI	ACNGT	3 cut(s)	88, 181, 503
TaiI	ACGT	2 cut(s)	138, 173
TaqI	TCGA	5 cut(s)	78, 210, 225, 510, 798
TasI	AATT	7 cut(s)	506, 1033, 1079, 1186, 1295, 1377, 1389
TatI	WGTACW	5 cut(s)	572, 608, 811, 969, 1513
TauI	GCSGC	3 cut(s)	14, 197, 218
TfiI	GAWTC	3 cut(s)	156, 560, 1284
Tru1I	TTAA	2 cut(s)	444, 933
Tru9I	TTAA	2 cut(s)	444, 933
TscAI	CASTG	8 cut(s)	121, 293, 508, 589, 824, 1111, 1218, 1279
TseFI	GTSAC	1 cut(s)	1433
Tsp45I	GTSAC	1 cut(s)	1433
TspDTI	ATGAA	2 cut(s)	59, 737
TspGWI	ACGGA	2 cut(s)	321, 392
TspRI	CASTG	8 cut(s)	121, 293, 508, 589, 824, 1111, 1218, 1279
Tth111I	GACNNNGTC	1 cut(s)	146
Van91I	CCANNNNNTGG	1 cut(s)	1507
VneI	GTGCAC	1 cut(s)	470
VpaK11BI	GGWCC	1 cut(s)	1494
XapI	RAATTY	4 cut(s)	506, 1033, 1186, 1295
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1045, 1331, 1504
XspI	CTAG	4 cut(s)	555, 570, 606, 1019
ZrmI	AGTACT	2 cut(s)	610, 1515
Zsp2I	ATGCAT	1 cut(s)	997

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.