Rmu_sc0015438.1_g000001

Protein of unknown function (DUF632)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015438.1
OG0014871
Physical Location & Seq
Reverse (-)
1 .. 980
980 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015438.1_g000001.1.cds

Sequence Viewer

Length: 186 bp
atggactgtggtggctccaaagtagacgacatcaaaacggcgtcggatacccgctacgccttggacgcatcccatctaacttatttccagtcgctcaagcaaatcggcgacgcgctttgcaagttcgttgacgaggacctagtcatcggcggcgttggggagtcatattcgctaccggattctcca
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF630 DUF632

Protein Analysis

62

Amino Acids

6.64

Weight (kDa)

4.23

Isoelectric Point (pI)

31.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 24
AccII CGCG 1 cut(s) 113
AciI CCGC 2 cut(s) 52, 150
AcyI GRCGYC 1 cut(s) 41
AspLEI GCGC 1 cut(s) 115
AspS9I GGNCC 1 cut(s) 136
AvaII GGWCC 1 cut(s) 136
BccI CCATC 1 cut(s) 81
BceAI ACGGC 1 cut(s) 54
BciVI GTATCC 1 cut(s) 40
BfaI CTAG 1 cut(s) 140
BfuI GTATCC 1 cut(s) 40
BisI GCNGC 1 cut(s) 151
BlsI GCNGC 1 cut(s) 152
Bme18I GGWCC 1 cut(s) 136
BmgT120I GGNCC 1 cut(s) 136
BmiI GGNNCC 1 cut(s) 16
BmsI GCATC 1 cut(s) 77
BpuEI CTTGAG 1 cut(s) 80
BsaHI GRCGYC 1 cut(s) 41
BsaJI CCNNGG 1 cut(s) 60
BsaWI WCCGGW 1 cut(s) 175
Bse1I ACTGG 1 cut(s) 88
BseDI CCNNGG 1 cut(s) 60
BseGI GGATG 1 cut(s) 68
BseNI ACTGG 1 cut(s) 88
Bsh1236I CGCG 1 cut(s) 113
BsiSI CCGG 1 cut(s) 176
BspACI CCGC 2 cut(s) 52, 150
BspFNI CGCG 1 cut(s) 113
BspLI GGNNCC 1 cut(s) 16
BsrI ACTGG 1 cut(s) 88
BssECI CCNNGG 1 cut(s) 60
BssNI GRCGYC 1 cut(s) 41
BssT1I CCWWGG 1 cut(s) 60
Bst4CI ACNGT 1 cut(s) 8
BstACI GRCGYC 1 cut(s) 41
BstF5I GGATG 1 cut(s) 68
BstFNI CGCG 1 cut(s) 113
BstHHI GCGC 1 cut(s) 115
BstMWI GCNNNNNNNGC 1 cut(s) 65
BstUI CGCG 1 cut(s) 113
BsuI GTATCC 1 cut(s) 40
BtsCI GGATG 1 cut(s) 68
CfoI GCGC 1 cut(s) 115
Cfr13I GGNCC 1 cut(s) 136
CseI GACGC 3 cut(s) 30, 74, 119
CviJI RGCY 1 cut(s) 15
CviKI_1 RGCY 1 cut(s) 15
Eco130I CCWWGG 1 cut(s) 60
Eco47I GGWCC 1 cut(s) 136
EcoO109I RGGNCCY 1 cut(s) 136
EcoT14I CCWWGG 1 cut(s) 60
ErhI CCWWGG 1 cut(s) 60
FaiI YATR 1 cut(s) 166
FauI CCCGC 1 cut(s) 59
FblI GTMKAC 1 cut(s) 24
Fnu4HI GCNGC 1 cut(s) 151
FokI GGATG 1 cut(s) 55
Fsp4HI GCNGC 1 cut(s) 151
FspBI CTAG 1 cut(s) 140
GlaI GCGC 1 cut(s) 114
GluI GCNGC 1 cut(s) 151
HapII CCGG 1 cut(s) 176
HgaI GACGC 3 cut(s) 30, 74, 119
HhaI GCGC 1 cut(s) 115
Hin1I GRCGYC 1 cut(s) 41
Hin6I GCGC 1 cut(s) 113
HinP1I GCGC 1 cut(s) 113
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HinfI GANTC 2 cut(s) 161, 179
HpaII CCGG 1 cut(s) 176
Hpy166II GTNNAC 2 cut(s) 25, 130
Hpy188I TCNGA 1 cut(s) 46
Hpy8I GTNNAC 2 cut(s) 25, 130
Hpy99I CGWCG 2 cut(s) 46, 113
HpyCH4III ACNGT 1 cut(s) 8
HpyCH4V TGCA 1 cut(s) 120
HpyF10VI GCNNNNNNNGC 1 cut(s) 65
Hsp92I GRCGYC 1 cut(s) 41
HspAI GCGC 1 cut(s) 113
LmnI GCTCC 1 cut(s) 20
LpnPI CCDG 1 cut(s) 101
LweI GCATC 1 cut(s) 77
MaeI CTAG 1 cut(s) 140
MlyI GAGTC 1 cut(s) 170
MmeI TCCRAC 1 cut(s) 24
MnlI CCTC 1 cut(s) 127
MspI CCGG 1 cut(s) 176
MvnI CGCG 1 cut(s) 113
MwoI GCNNNNNNNGC 1 cut(s) 65
NlaIV GGNNCC 1 cut(s) 16
PfeI GAWTC 1 cut(s) 179
PflFI GACNNNGTC 1 cut(s) 140
PkrI GCNGC 1 cut(s) 152
PleI GAGTC 1 cut(s) 169
PpsI GAGTC 1 cut(s) 169
PpuMI RGGWCCY 1 cut(s) 136
Psp5II RGGWCCY 1 cut(s) 136
PspN4I GGNNCC 1 cut(s) 16
PspPI GGNCC 1 cut(s) 136
PspPPI RGGWCCY 1 cut(s) 136
PsyI GACNNNGTC 1 cut(s) 140
SatI GCNGC 1 cut(s) 151
Sau96I GGNCC 1 cut(s) 136
SchI GAGTC 1 cut(s) 170
SetI ASST 1 cut(s) 141
SfaNI GCATC 1 cut(s) 77
SgeI CNNG 8 cut(s) 63, 73, 100, 109, 124, 133, 145, 152
SinI GGWCC 1 cut(s) 136
SmlI CTYRAG 1 cut(s) 95
SmoI CTYRAG 1 cut(s) 95
SsiI CCGC 2 cut(s) 52, 150
SspMI CTAG 1 cut(s) 140
StyI CCWWGG 1 cut(s) 60
TaaI ACNGT 1 cut(s) 8
TauI GCSGC 1 cut(s) 153
TfiI GAWTC 1 cut(s) 179
Tth111I GACNNNGTC 1 cut(s) 140
VpaK11BI GGWCC 1 cut(s) 136
XmiI GTMKAC 1 cut(s) 24
XspI CTAG 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.