Rh7AG370000

Protein of unknown function (DUF632)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0014871
Physical Location & Seq
Reverse (-)
47698449 .. 47698751
303 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG370000.1

Sequence Viewer

Length: 303 bp
ATGGACTGTGGTGGCTCCAAAGTAGACGACATCAAAACGGCGTCGGATACCCGCTACGCCTTGGACGCAGCCCATCTAACTTATTTCCAGTCGCTCAAGCAAATCAGCGACGCGCTTTGCAAGTTCGTTGACGAGGACCTAGTCATCGGCGGCGTCGGCGAGTCATATTCGCTACAGGATTCTCCAGTTCTGACATTGCCCTCCGTCGAAGGAAGCCCGGGAAAGGAAAGCCCCAAGGGAAAAGCTCCTCGTCGTCTTCGATTTCACTCTCGCATAGTCACTCAGCCTCAGCATCGTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF630 DUF632

Protein Analysis

100

Amino Acids

10.98

Weight (kDa)

7.8

Isoelectric Point (pI)

58.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF630 PF04783 11 - 46 2.5e-09 Protein of unknown function (DUF630)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 24
AccII CGCG 1 cut(s) 113
AciI CCGC 2 cut(s) 52, 150
AcyI GRCGYC 2 cut(s) 41, 153
AfiI CCNNNNNNNGG 1 cut(s) 223
AluBI AGCT 1 cut(s) 245
AluI AGCT 1 cut(s) 245
Ama87I CYCGRG 1 cut(s) 217
ApeKI GCWGC 1 cut(s) 68
AspLEI GCGC 1 cut(s) 115
AspS9I GGNCC 1 cut(s) 136
AsuC2I CCSGG 2 cut(s) 218, 219
AvaI CYCGRG 1 cut(s) 217
AvaII GGWCC 1 cut(s) 136
BbsI GAAGAC 1 cut(s) 248
BbvCI CCTCAGC 1 cut(s) 288
BbvI GCAGC 1 cut(s) 80
BccI CCATC 1 cut(s) 81
BceAI ACGGC 1 cut(s) 54
BciVI GTATCC 1 cut(s) 40
BcnI CCSGG 2 cut(s) 218, 219
BfaI CTAG 1 cut(s) 140
BfmI CTRYAG 1 cut(s) 173
BfuI GTATCC 1 cut(s) 40
BisI GCNGC 2 cut(s) 69, 151
BlsI GCNGC 2 cut(s) 70, 152
Bme1390I CCNGG 2 cut(s) 218, 219
Bme18I GGWCC 1 cut(s) 136
BmeT110I CYCGRG 1 cut(s) 217
BmgT120I GGNCC 1 cut(s) 136
BmiI GGNNCC 1 cut(s) 16
BmrFI CCNGG 2 cut(s) 218, 219
BpiI GAAGAC 1 cut(s) 248
BpmI CTGGAG 1 cut(s) 168
Bpu10I CCTNAGC 1 cut(s) 288
BpuEI CTTGAG 1 cut(s) 80
BpuMI CCSGG 2 cut(s) 218, 219
BsaHI GRCGYC 2 cut(s) 41, 153
BsaJI CCNNGG 3 cut(s) 60, 217, 234
Bsc4I CCNNNNNNNGG 1 cut(s) 223
Bse1I ACTGG 2 cut(s) 88, 185
Bse3DI GCAATG 1 cut(s) 194
BseDI CCNNGG 3 cut(s) 60, 217, 234
BseLI CCNNNNNNNGG 1 cut(s) 223
BseMI GCAATG 1 cut(s) 194
BseMII CTCAG 2 cut(s) 296, 302
BseNI ACTGG 2 cut(s) 88, 185
BseRI GAGGAG 1 cut(s) 237
BseXI GCAGC 1 cut(s) 80
Bsh1236I CGCG 1 cut(s) 113
BsiHKCI CYCGRG 1 cut(s) 217
BsiSI CCGG 1 cut(s) 218
BslI CCNNNNNNNGG 1 cut(s) 223
BsoBI CYCGRG 1 cut(s) 217
BspACI CCGC 2 cut(s) 52, 150
BspCNI CTCAG 2 cut(s) 295, 301
BspFNI CGCG 1 cut(s) 113
BspLI GGNNCC 1 cut(s) 16
BsrDI GCAATG 1 cut(s) 194
BsrI ACTGG 2 cut(s) 88, 185
BssECI CCNNGG 3 cut(s) 60, 217, 234
BssNI GRCGYC 2 cut(s) 41, 153
BssT1I CCWWGG 2 cut(s) 60, 234
Bst4CI ACNGT 1 cut(s) 8
BstACI GRCGYC 2 cut(s) 41, 153
BstDEI CTNAG 2 cut(s) 282, 288
BstFNI CGCG 1 cut(s) 113
BstHHI GCGC 1 cut(s) 115
BstMWI GCNNNNNNNGC 2 cut(s) 65, 156
BstSCI CCNGG 2 cut(s) 216, 217
BstSFI CTRYAG 1 cut(s) 173
BstUI CGCG 1 cut(s) 113
BstV1I GCAGC 1 cut(s) 80
BstV2I GAAGAC 1 cut(s) 248
BsuI GTATCC 1 cut(s) 40
CfoI GCGC 1 cut(s) 115
Cfr13I GGNCC 1 cut(s) 136
Cfr9I CCCGGG 1 cut(s) 217
CseI GACGC 4 cut(s) 30, 74, 119, 142
CviJI RGCY 6 cut(s) 15, 71, 216, 231, 245, 286
CviKI_1 RGCY 6 cut(s) 15, 71, 216, 231, 245, 286
DdeI CTNAG 2 cut(s) 282, 288
Eco130I CCWWGG 2 cut(s) 60, 234
Eco47I GGWCC 1 cut(s) 136
Eco88I CYCGRG 1 cut(s) 217
EcoO109I RGGNCCY 1 cut(s) 136
EcoT14I CCWWGG 2 cut(s) 60, 234
ErhI CCWWGG 2 cut(s) 60, 234
FaiI YATR 2 cut(s) 166, 275
FauI CCCGC 1 cut(s) 59
FblI GTMKAC 1 cut(s) 24
Fnu4HI GCNGC 2 cut(s) 69, 151
Fsp4HI GCNGC 2 cut(s) 69, 151
FspBI CTAG 1 cut(s) 140
GlaI GCGC 1 cut(s) 114
GluI GCNGC 2 cut(s) 69, 151
GsuI CTGGAG 1 cut(s) 168
HapII CCGG 1 cut(s) 218
HgaI GACGC 4 cut(s) 30, 74, 119, 142
HhaI GCGC 1 cut(s) 115
Hin1I GRCGYC 2 cut(s) 41, 153
Hin6I GCGC 1 cut(s) 113
HinP1I GCGC 1 cut(s) 113
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HinfI GANTC 2 cut(s) 161, 179
HpaII CCGG 1 cut(s) 218
Hpy166II GTNNAC 2 cut(s) 25, 130
Hpy188I TCNGA 2 cut(s) 46, 192
Hpy8I GTNNAC 2 cut(s) 25, 130
Hpy99I CGWCG 6 cut(s) 46, 113, 158, 209, 255, 300
HpyAV CCTTC 1 cut(s) 203
HpyCH4III ACNGT 1 cut(s) 8
HpyCH4V TGCA 1 cut(s) 120
HpyF10VI GCNNNNNNNGC 2 cut(s) 65, 156
HpyF3I CTNAG 2 cut(s) 282, 288
Hsp92I GRCGYC 2 cut(s) 41, 153
HspAI GCGC 1 cut(s) 113
LmnI GCTCC 2 cut(s) 20, 250
LpnPI CCDG 4 cut(s) 101, 161, 198, 231
Lsp1109I GCAGC 1 cut(s) 80
MaeI CTAG 1 cut(s) 140
MaeIII GTNAC 1 cut(s) 277
MboII GAAGA 1 cut(s) 248
MlyI GAGTC 1 cut(s) 170
MmeI TCCRAC 1 cut(s) 24
MnlI CCTC 4 cut(s) 127, 211, 258, 297
MspI CCGG 1 cut(s) 218
MspR9I CCNGG 2 cut(s) 218, 219
MvnI CGCG 1 cut(s) 113
MwoI GCNNNNNNNGC 2 cut(s) 65, 156
NciI CCSGG 2 cut(s) 218, 219
NlaIV GGNNCC 1 cut(s) 16
NmuCI GTSAC 1 cut(s) 277
PcsI WCGNNNNNNNCGW 1 cut(s) 256
PfeI GAWTC 1 cut(s) 179
PflFI GACNNNGTC 1 cut(s) 140
PkrI GCNGC 2 cut(s) 70, 152
PleI GAGTC 1 cut(s) 169
PpsI GAGTC 1 cut(s) 169
PpuMI RGGWCCY 1 cut(s) 136
Psp5II RGGWCCY 1 cut(s) 136
PspN4I GGNNCC 1 cut(s) 16
PspPI GGNCC 1 cut(s) 136
PspPPI RGGWCCY 1 cut(s) 136
PsyI GACNNNGTC 1 cut(s) 140
SatI GCNGC 2 cut(s) 69, 151
Sau96I GGNCC 1 cut(s) 136
SchI GAGTC 1 cut(s) 170
ScrFI CCNGG 2 cut(s) 218, 219
SetI ASST 2 cut(s) 141, 247
SfcI CTRYAG 1 cut(s) 173
SinI GGWCC 1 cut(s) 136
SmaI CCCGGG 1 cut(s) 219
SmlI CTYRAG 1 cut(s) 95
SmoI CTYRAG 1 cut(s) 95
SsiI CCGC 2 cut(s) 52, 150
SspMI CTAG 1 cut(s) 140
StyD4I CCNGG 2 cut(s) 216, 217
StyI CCWWGG 2 cut(s) 60, 234
TaaI ACNGT 1 cut(s) 8
TaqI TCGA 2 cut(s) 207, 259
TauI GCSGC 1 cut(s) 153
TfiI GAWTC 1 cut(s) 179
TseFI GTSAC 1 cut(s) 277
TseI GCWGC 1 cut(s) 68
Tsp45I GTSAC 1 cut(s) 277
TspGWI ACGGA 1 cut(s) 193
TspMI CCCGGG 1 cut(s) 217
Tth111I GACNNNGTC 1 cut(s) 140
VpaK11BI GGWCC 1 cut(s) 136
XmaI CCCGGG 1 cut(s) 217
XmiI GTMKAC 1 cut(s) 24
XspI CTAG 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.