Rmu_sc0016725.1_g000007

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016725.1
Physical Location & Seq
Reverse (-)
23086 .. 29964
6879 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016725.1_g000007.1.cds

Sequence Viewer

Length: 1884 bp
atgcaggcgttggctgcagcaacaaaaactgttgattgtctcaaagtcgtccatagtttgcatgcacattttttgcttgtcggggatttcaacacaccaattatatatcaagttcaccgagtacgtgatggaaagagctttgctactcgaagagtagatgcaatacaaaaagggataaacatattcactttactggcttcctttcaaaaagaagaagacggttctgtccaccaggaagccataatgccatctgtgcctcccccagatacgctcccatcaatggaagaactgcgcgaaagacgcctttttgatccccgtcttccaagaacttatcgaatcaaggtagctgcaaaggagtttgtcccgtggccaattgagataagattttgtgaacctagtagccggaccaatcagactaaatctccaccaagattgaggttctggtttagagcaaaaggaaaactttcagatgatcaggctttgcatagatgtgttgtggcttatgcttcagatttgatattcgctggtgttagtctgaatcctcaccgtagaagaggacataaaactagtcaagttagtttggaccatgcaatgtggtttcaccgcccccttagagctgatgactggttactacatgtgatagtgagtcccattgcctataatgcacgcggctatgtcacaggccaaatgttcaacaccaagggagagcttgttgtatcattgactcaagagtccctgaataggccaattagaccaactccggctgtcacatctaagttgaaattcacttactgcaacattagaatggaacagcctggtaatggaacatatgggatcagtcaaatggaaccggcccaacagccactgatatctggacttcctgatgacattgctcttttctgcatggcaagggttccacgaaagtaccatacagtcctaaagtgtgtttcaaaaagatggcaacacttggtgggcagtgaagagtggcattcctaccgtcgaaagcataatcttgatgagacttggatctatgctttgtgccgagacaaattggagcgtctttgcctgtatgtattggatccaaagtcatcaagaaggagttggaagcttgttaatgagcttcctcctcgcaccttgaagagaaaaggcatgggttttgaagtgcttggaaagaaagtttacttgttgggtggttgcggttggtgtgaagatgctacagatgaggtctactactatgatgcttccctgaacacttggagtgaagctgctcccttatctattgctaggtgctattttgcctgtgaagtattagatgaaaaaatatattctattggtggattaggttcaaattcaagcgatccacattcttgggacatttatgatcctagcactaatagttggatatttcactcagacccaaacattgtccctgaaattgaggattctgtggtcatggatgggaaaatctatatccgctgtggcacttctgctgtatcttctcatgtctatgctgttgtttatgaaccatccagcggtacatggcagcatgcagatgctgatatggtgtctggctggcgaggtccggcagttgtaatagacgagaccctctatgtattggatcagagctcaggaactaggctgatgatgtggcagaaggagactagggaatggattccagttgggaggctgtcatccttgcttaccagaccaccctgtcaactcgtagctattgggaagagtatttatgttgtcggaaaggggcttagcacagtcatgtttgatgttgaaaatgcagggaatatggaaggggtaattgtgagttcttcaatacctaaattgaattctgatgatgatgtaatcagctgtaaatgtttgtccatttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

627

Amino Acids

70.95

Weight (kDa)

8.55

Isoelectric Point (pI)

38.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 224, 730, 1713
AccI GTMKAC 1 cut(s) 1227
AccII CGCG 2 cut(s) 294, 669
AciI CCGC 5 cut(s) 604, 669, 1197, 1474, 1533
AclWI GGATC 8 cut(s) 305, 842, 1034, 1073, 1086, 1352, 1376, 1626
AcoI YGGCCR 1 cut(s) 368
AcsI RAATTY 3 cut(s) 782, 1348, 1840
AcuI CTGAAG 1 cut(s) 492
AcyI GRCGYC 1 cut(s) 301
AdeI CACNNNGTG 1 cut(s) 970
AfaI GTAC 3 cut(s) 123, 926, 1537
AfiI CCNNNNNNNGG 4 cut(s) 280, 741, 821, 1532
AflIII ACRYGT 1 cut(s) 634
AhlI ACTAGT 1 cut(s) 566
AjnI CCWGG 2 cut(s) 231, 814
Alw21I GWGCWC 1 cut(s) 1628
Alw26I GTCTC 5 cut(s) 44, 1013, 1038, 1595, 1652
AlwI GGATC 8 cut(s) 305, 842, 1034, 1073, 1086, 1352, 1376, 1626
AlwNI CAGNNNCTG 2 cut(s) 865, 1556
AoxI GGCC 4 cut(s) 368, 682, 743, 852
ApeKI GCWGC 5 cut(s) 14, 17, 347, 1265, 1543
ApoI RAATTY 3 cut(s) 782, 1348, 1840
Asp700I GAANNNNTTC 2 cut(s) 463, 1671
AspLEI GCGC 1 cut(s) 294
AspS9I GGNCC 4 cut(s) 405, 583, 853, 1580
AsuHPI GGTGA 3 cut(s) 107, 536, 593
AvaII GGWCC 3 cut(s) 405, 583, 1580
BaeI ACNNNNGTAYC 2 cut(s) 908, 941
BalI TGGCCA 1 cut(s) 370
BamHI GGATCC 1 cut(s) 1078
BanII GRGCYC 1 cut(s) 1628
BbsI GAAGAC 2 cut(s) 222, 311
Bbv12I GWGCWC 1 cut(s) 1628
BbvI GCAGC 4 cut(s) 29, 334, 1252, 1555
BccI CCATC 6 cut(s) 122, 256, 283, 951, 1451, 1534
BciT130I CCWGG 2 cut(s) 233, 816
BclI TGATCA 1 cut(s) 472
BcoDI GTCTC 5 cut(s) 44, 1013, 1038, 1595, 1652
BcuI ACTAGT 1 cut(s) 566
BfaI CTAG 6 cut(s) 396, 567, 1284, 1386, 1635, 1662
BfmI CTRYAG 2 cut(s) 15, 1215
BisI GCNGC 6 cut(s) 15, 18, 348, 670, 1266, 1544
BlpI GCTNAGC 1 cut(s) 1763
BlsI GCNGC 6 cut(s) 16, 19, 349, 671, 1267, 1545
Bme1390I CCNGG 2 cut(s) 233, 816
Bme18I GGWCC 3 cut(s) 405, 583, 1580
BmgT120I GGNCC 4 cut(s) 405, 583, 853, 1580
BmiI GGNNCC 3 cut(s) 849, 915, 1080
BmrFI CCNGG 2 cut(s) 233, 816
BmsI GCATC 4 cut(s) 148, 1201, 1228, 1543
BpiI GAAGAC 2 cut(s) 222, 311
Bpu10I CCTNAGC 1 cut(s) 1627
Bpu1102I GCTNAGC 1 cut(s) 1763
BpuEI CTTGAG 1 cut(s) 711
BsaAI YACGTR 1 cut(s) 125
BsaHI GRCGYC 1 cut(s) 301
BsaI GGTCTC 1 cut(s) 1595
BsaJI CCNNGG 2 cut(s) 365, 699
BsaXI ACNNNNNCTCC 4 cut(s) 406, 436, 696, 726
Bsc4I CCNNNNNNNGG 4 cut(s) 280, 741, 821, 1532
Bse118I RCCGGY 1 cut(s) 850
Bse1I ACTGG 3 cut(s) 198, 629, 1676
Bse3DI GCAATG 3 cut(s) 597, 651, 888
BseBI CCWGG 2 cut(s) 233, 816
BseDI CCNNGG 2 cut(s) 365, 699
BseGI GGATG 3 cut(s) 1462, 1526, 1691
BseLI CCNNNNNNNGG 4 cut(s) 280, 741, 821, 1532
BseMI GCAATG 3 cut(s) 597, 651, 888
BseMII CTCAG 2 cut(s) 1425, 1641
BseNI ACTGG 3 cut(s) 198, 629, 1676
BseRI GAGGAG 1 cut(s) 1116
BseXI GCAGC 4 cut(s) 29, 334, 1252, 1555
Bsh1236I CGCG 2 cut(s) 294, 669
BshFI GGCC 4 cut(s) 370, 684, 745, 854
BsiHKAI GWGCWC 1 cut(s) 1628
BsiSI CCGG 4 cut(s) 403, 761, 851, 1583
BslFI GGGAC 5 cut(s) 347, 633, 718, 1385, 1412
BslI CCNNNNNNNGG 4 cut(s) 280, 741, 821, 1532
BsmAI GTCTC 5 cut(s) 44, 1013, 1038, 1595, 1652
BsmFI GGGAC 5 cut(s) 347, 633, 718, 1385, 1412
BsmI GAATGC 1 cut(s) 988
BsnI GGCC 4 cut(s) 370, 684, 745, 854
Bso31I GGTCTC 1 cut(s) 1595
Bsp1286I GDGCHC 1 cut(s) 1628
Bsp143I GATC 8 cut(s) 310, 472, 834, 1026, 1078, 1357, 1381, 1618
Bsp1720I GCTNAGC 1 cut(s) 1763
BspACI CCGC 5 cut(s) 604, 669, 1197, 1474, 1533
BspANI GGCC 4 cut(s) 370, 684, 745, 854
BspCNI CTCAG 2 cut(s) 1424, 1640
BspFNI CGCG 2 cut(s) 294, 669
BspLI GGNNCC 3 cut(s) 849, 915, 1080
BspMAI CTGCAG 1 cut(s) 19
BspPI GGATC 8 cut(s) 305, 842, 1034, 1073, 1086, 1352, 1376, 1626
BspTNI GGTCTC 1 cut(s) 1595
BsrDI GCAATG 3 cut(s) 597, 651, 888
BsrFI RCCGGY 1 cut(s) 850
BsrI ACTGG 3 cut(s) 198, 629, 1676
BssAI RCCGGY 1 cut(s) 850
BssECI CCNNGG 2 cut(s) 365, 699
BssMI GATC 8 cut(s) 310, 472, 834, 1026, 1078, 1357, 1381, 1618
BssNI GRCGYC 1 cut(s) 301
BssT1I CCWWGG 1 cut(s) 699
Bst2UI CCWGG 2 cut(s) 233, 816
Bst4CI ACNGT 6 cut(s) 31, 221, 548, 934, 998, 1771
Bst6I CTCTTC 5 cut(s) 145, 547, 975, 1133, 1730
BstACI GRCGYC 1 cut(s) 301
BstBAI YACGTR 1 cut(s) 125
BstC8I GCNNGC 5 cut(s) 6, 63, 667, 1548, 1574
BstDEI CTNAG 5 cut(s) 611, 774, 1411, 1627, 1763
BstDSI CCRYGG 1 cut(s) 365
BstF5I GGATG 3 cut(s) 1462, 1526, 1691
BstFNI CGCG 2 cut(s) 294, 669
BstHHI GCGC 1 cut(s) 294
BstKTI GATC 8 cut(s) 313, 475, 837, 1029, 1081, 1360, 1384, 1621
BstMAI GTCTC 5 cut(s) 44, 1013, 1038, 1595, 1652
BstMBI GATC 8 cut(s) 310, 472, 834, 1026, 1078, 1357, 1381, 1618
BstMWI GCNNNNNNNGC 4 cut(s) 14, 253, 300, 662
BstNI CCWGG 2 cut(s) 233, 816
BstNSI RCATGY 3 cut(s) 65, 638, 1550
BstSCI CCNGG 2 cut(s) 231, 814
BstSFI CTRYAG 2 cut(s) 15, 1215
BstUI CGCG 2 cut(s) 294, 669
BstV1I GCAGC 4 cut(s) 29, 334, 1252, 1555
BstV2I GAAGAC 2 cut(s) 222, 311
BstX2I RGATCY 2 cut(s) 1026, 1078
BstXI CCANNNNNNTGG 1 cut(s) 1368
BstYI RGATCY 2 cut(s) 1026, 1078
BsuRI GGCC 4 cut(s) 370, 684, 745, 854
BtgI CCRYGG 1 cut(s) 365
BtsCI GGATG 3 cut(s) 1462, 1526, 1691
BtsI GCAGTG 1 cut(s) 982
BtsIMutI CAGTG 2 cut(s) 863, 982
Cac8I GCNNGC 5 cut(s) 6, 63, 667, 1548, 1574
CaiI CAGNNNCTG 2 cut(s) 865, 1556
CfoI GCGC 1 cut(s) 294
Cfr10I RCCGGY 1 cut(s) 850
Cfr13I GGNCC 4 cut(s) 405, 583, 853, 1580
CseI GACGC 2 cut(s) 309, 1046
Csp6I GTAC 3 cut(s) 122, 925, 1536
CspCI CAANNNNNGTGG 2 cut(s) 414, 449
CviQI GTAC 3 cut(s) 122, 925, 1536
DdeI CTNAG 5 cut(s) 611, 774, 1411, 1627, 1763
DpnI GATC 8 cut(s) 312, 474, 836, 1028, 1080, 1359, 1383, 1620
DpnII GATC 8 cut(s) 310, 472, 834, 1026, 1078, 1357, 1381, 1618
DraIII CACNNNGTG 1 cut(s) 970
DrdI GACNNNNNNGTC 3 cut(s) 224, 730, 1713
DseDI GACNNNNNNGTC 3 cut(s) 224, 730, 1713
EaeI YGGCCR 1 cut(s) 368
Eam1104I CTCTTC 5 cut(s) 145, 547, 975, 1133, 1730
EarI CTCTTC 5 cut(s) 145, 547, 975, 1133, 1730
Ecl136II GAGCTC 1 cut(s) 1626
Eco130I CCWWGG 1 cut(s) 699
Eco24I GRGCYC 1 cut(s) 1628
Eco31I GGTCTC 1 cut(s) 1595
Eco32I GATATC 1 cut(s) 870
Eco47I GGWCC 3 cut(s) 405, 583, 1580
Eco53kI GAGCTC 1 cut(s) 1626
Eco57I CTGAAG 1 cut(s) 492
EcoICRI GAGCTC 1 cut(s) 1626
EcoRI GAATTC 1 cut(s) 1840
EcoRII CCWGG 2 cut(s) 231, 814
EcoRV GATATC 1 cut(s) 870
EcoT14I CCWWGG 1 cut(s) 699
EcoT38I GRGCYC 1 cut(s) 1628
ErhI CCWWGG 1 cut(s) 699
FalI AAGNNNNNCTT 2 cut(s) 447, 479
FaqI GGGAC 5 cut(s) 347, 633, 718, 1385, 1412
FauNDI CATATG 1 cut(s) 829
FbaI TGATCA 1 cut(s) 472
FblI GTMKAC 1 cut(s) 1227
Fnu4HI GCNGC 6 cut(s) 15, 18, 348, 670, 1266, 1544
FokI GGATG 3 cut(s) 1469, 1513, 1678
FriOI GRGCYC 1 cut(s) 1628
Fsp4HI GCNGC 6 cut(s) 15, 18, 348, 670, 1266, 1544
FspBI CTAG 6 cut(s) 396, 567, 1284, 1386, 1635, 1662
GlaI GCGC 1 cut(s) 293
GluI GCNGC 6 cut(s) 15, 18, 348, 670, 1266, 1544
HaeIII GGCC 4 cut(s) 370, 684, 745, 854
HapII CCGG 4 cut(s) 403, 761, 851, 1583
HgaI GACGC 2 cut(s) 309, 1046
HhaI GCGC 1 cut(s) 294
Hin1I GRCGYC 1 cut(s) 301
Hin6I GCGC 1 cut(s) 292
HinP1I GCGC 1 cut(s) 292
HincII GTYRAC 1 cut(s) 1718
HindII GTYRAC 1 cut(s) 1718
HindIII AAGCTT 1 cut(s) 1106
HinfI GANTC 7 cut(s) 336, 538, 646, 724, 731, 1442, 1672
HpaII CCGG 4 cut(s) 403, 761, 851, 1583
HphI GGTGA 3 cut(s) 107, 536, 593
Hpy166II GTNNAC 6 cut(s) 115, 229, 392, 1180, 1228, 1718
Hpy188I TCNGA 8 cut(s) 414, 469, 511, 537, 1414, 1623, 1754, 1846
Hpy188III TCNNGA 6 cut(s) 728, 873, 881, 1013, 1092, 1629
Hpy8I GTNNAC 6 cut(s) 115, 229, 392, 1180, 1228, 1718
Hpy99I CGWCG 1 cut(s) 1002
HpyAV CCTTC 3 cut(s) 1089, 1648, 1799
HpyCH4III ACNGT 6 cut(s) 31, 221, 548, 934, 998, 1771
HpyCH4IV ACGT 1 cut(s) 124
HpyF10VI GCNNNNNNNGC 4 cut(s) 14, 253, 300, 662
HpyF3I CTNAG 5 cut(s) 611, 774, 1411, 1627, 1763
HpySE526I ACGT 1 cut(s) 124
Hsp92I GRCGYC 1 cut(s) 301
HspAI GCGC 1 cut(s) 292
Ksp22I TGATCA 1 cut(s) 472
Kzo9I GATC 8 cut(s) 310, 472, 834, 1026, 1078, 1357, 1381, 1618
LmnI GCTCC 3 cut(s) 276, 1054, 1273
Lsp1109I GCAGC 4 cut(s) 29, 334, 1252, 1555
LweI GCATC 4 cut(s) 148, 1201, 1228, 1543
MaeI CTAG 6 cut(s) 396, 567, 1284, 1386, 1635, 1662
MaeII ACGT 1 cut(s) 124
MaeIII GTNAC 3 cut(s) 627, 676, 766
MalI GATC 8 cut(s) 312, 474, 836, 1028, 1080, 1359, 1383, 1620
MboI GATC 8 cut(s) 310, 472, 834, 1026, 1078, 1357, 1381, 1618
MfeI CAATTG 1 cut(s) 372
MflI RGATCY 2 cut(s) 1026, 1078
MhlI GDGCHC 1 cut(s) 1628
MlsI TGGCCA 1 cut(s) 370
MluNI TGGCCA 1 cut(s) 370
MlyI GAGTC 3 cut(s) 655, 718, 740
MmeI TCCRAC 3 cut(s) 1082, 1379, 1732
Mox20I TGGCCA 1 cut(s) 370
MroXI GAANNNNTTC 2 cut(s) 463, 1671
MscI TGGCCA 1 cut(s) 370
MseI TTAA 1 cut(s) 1113
MslI CAYNNNNRTG 5 cut(s) 489, 803, 1506, 1551, 1772
Msp20I TGGCCA 1 cut(s) 370
MspA1I CMGCKG 3 cut(s) 1476, 1533, 1863
MspI CCGG 4 cut(s) 403, 761, 851, 1583
MspR9I CCNGG 2 cut(s) 233, 816
MunI CAATTG 1 cut(s) 372
Mva1269I GAATGC 1 cut(s) 988
MvaI CCWGG 2 cut(s) 233, 816
MvnI CGCG 2 cut(s) 294, 669
MwoI GCNNNNNNNGC 4 cut(s) 14, 253, 300, 662
NdeI CATATG 1 cut(s) 829
NdeII GATC 8 cut(s) 310, 472, 834, 1026, 1078, 1357, 1381, 1618
NlaIV GGNNCC 3 cut(s) 849, 915, 1080
NmeAIII GCCGAG 1 cut(s) 1067
NmuCI GTSAC 2 cut(s) 676, 766
NspI RCATGY 3 cut(s) 65, 638, 1550
PaeI GCATGC 2 cut(s) 65, 1550
PciI ACATGT 1 cut(s) 634
PctI GAATGC 1 cut(s) 988
PdmI GAANNNNTTC 2 cut(s) 463, 1671
PfeI GAWTC 4 cut(s) 336, 538, 1442, 1672
PkrI GCNGC 6 cut(s) 16, 19, 349, 671, 1267, 1545
PleI GAGTC 3 cut(s) 654, 718, 739
PpsI GAGTC 3 cut(s) 654, 718, 739
Ppu21I YACGTR 1 cut(s) 125
PscI ACATGT 1 cut(s) 634
Psp124BI GAGCTC 1 cut(s) 1628
Psp6I CCWGG 2 cut(s) 231, 814
PspGI CCWGG 2 cut(s) 231, 814
PspN4I GGNNCC 3 cut(s) 849, 915, 1080
PspPI GGNCC 4 cut(s) 405, 583, 853, 1580
PstI CTGCAG 1 cut(s) 19
PstNI CAGNNNCTG 2 cut(s) 865, 1556
PsuI RGATCY 2 cut(s) 1026, 1078
PvuII CAGCTG 1 cut(s) 1863
RsaI GTAC 3 cut(s) 123, 926, 1537
RsaNI GTAC 3 cut(s) 122, 925, 1536
RseI CAYNNNNRTG 5 cut(s) 489, 803, 1506, 1551, 1772
SacI GAGCTC 1 cut(s) 1628
SaqAI TTAA 1 cut(s) 1113
SatI GCNGC 6 cut(s) 15, 18, 348, 670, 1266, 1544
Sau3AI GATC 8 cut(s) 310, 472, 834, 1026, 1078, 1357, 1381, 1618
Sau96I GGNCC 4 cut(s) 405, 583, 853, 1580
SchI GAGTC 3 cut(s) 655, 718, 740
ScrFI CCNGG 2 cut(s) 233, 816
SduI GDGCHC 1 cut(s) 1628
SfaNI GCATC 4 cut(s) 148, 1201, 1228, 1543
SfcI CTRYAG 2 cut(s) 15, 1215
SinI GGWCC 3 cut(s) 405, 583, 1580
SmiMI CAYNNNNRTG 5 cut(s) 489, 803, 1506, 1551, 1772
SmlI CTYRAG 1 cut(s) 726
SmoI CTYRAG 1 cut(s) 726
SpeI ACTAGT 1 cut(s) 566
SphI GCATGC 2 cut(s) 65, 1550
SsiI CCGC 5 cut(s) 604, 669, 1197, 1474, 1533
SspMI CTAG 6 cut(s) 396, 567, 1284, 1386, 1635, 1662
SstI GAGCTC 1 cut(s) 1628
StyD4I CCNGG 2 cut(s) 231, 814
StyI CCWWGG 1 cut(s) 699
TaaI ACNGT 6 cut(s) 31, 221, 548, 934, 998, 1771
TaiI ACGT 1 cut(s) 127
TaqI TCGA 3 cut(s) 148, 334, 1000
TauI GCSGC 1 cut(s) 672
TfiI GAWTC 4 cut(s) 336, 538, 1442, 1672
Tru1I TTAA 1 cut(s) 1113
Tru9I TTAA 1 cut(s) 1113
TscAI CASTG 2 cut(s) 870, 982
TseFI GTSAC 2 cut(s) 676, 766
TseI GCWGC 5 cut(s) 14, 17, 347, 1265, 1543
Tsp45I GTSAC 2 cut(s) 676, 766
TspDTI ATGAA 2 cut(s) 1329, 1536
TspRI CASTG 2 cut(s) 870, 982
VpaK11BI GGWCC 3 cut(s) 405, 583, 1580
XapI RAATTY 3 cut(s) 782, 1348, 1840
XceI RCATGY 3 cut(s) 65, 638, 1550
XmiI GTMKAC 1 cut(s) 1227
XmnI GAANNNNTTC 2 cut(s) 463, 1671
XspI CTAG 6 cut(s) 396, 567, 1284, 1386, 1635, 1662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.