Rmu_sc0018909.1_g000006

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0018909.1
Physical Location & Seq
Forward (+)
19488 .. 22642
3155 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0018909.1_g000006.1.cds

Sequence Viewer

Length: 1218 bp
atgagcttcgaatcttaccctcctccatttcgcaacctactccaaccgccactgagcagcccggcccagatcctcgattcgggatggggtgcccttaactcggatcctatacccgtcgtggatcttcagtgccttgagcttggggactgcaagcttcttgaggagccttgtaagcaatggggactttttcgtttggtcaaccacggagttcctgaaagtcttttgagtcaagcacaggactatgccagagcgcttttttctcttacctttgaatccaaacaggcccttattactagccctctgtcttacttctggggtacccctgcccttactccaactggggcggcgttatcggccgaaaaactccagaatatcaatttggtcgaaggtctcaacgtccctctgagtcaactgcctcgatttcaaactgacgatcctagaattgcttctttctgccatgtgctagaagaatatgggaggcatctagctagaattggcagaaccctatttaaaggtatgtccacgagcctgagtttggatccaattgaatacgagtcaaatttatcagaatctactggtttagtacgtgtataccgatacccacattggccttcgaaatataagaaagaaaacaagtctgcatggggaatggacgtgcacactgacagttccgtgctgtccatactgaaccaggacgaggtcggtggccttgaagtgctcaaagacaatcagtggttcactgtgaaacccattcccaacacactggtcgtcaatcttggagatatgatgcaggcgataagcgatgatgaatacacaagtgtgaaacacagggtaaaggtgaacgaatacagagagcgcatttcaatttgctactttgtgtttcctggcgaaaacagtgtgattcgaagctcaaactacaagccttttacttacagggattttcaagaacaagtgcagaaagacataaagactgttggctataaggtcaccggcagccggattccggccaacgattgccggatttcggtcacctgcagccggattccggccaacgatagcctgattccggtcaccagccgttggaacaggttaacgaccgtcgaaatccgttcaccagttgctgtctaccgaacttctctgaaaaccacgccggaagtccctaaagaggtcgctggaaaggtttattgccctaaacagatctgtattgtcccccaatag

Protein Analysis

405

Amino Acids

45.61

Weight (kDa)

6.99

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012155)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1040
Acc36I ACCTGC 1 cut(s) 1040
Acc65I GGTACC 1 cut(s) 317
AccB1I GGYRCC 2 cut(s) 89, 317
AccB7I CCANNNNNTGG 1 cut(s) 1080
AccI GTMKAC 2 cut(s) 591, 1125
AciI CCGC 2 cut(s) 47, 344
AclWI GGATC 7 cut(s) 64, 98, 111, 129, 428, 533, 546
AcoI YGGCCR 3 cut(s) 354, 1005, 1047
AcsI RAATTY 1 cut(s) 559
AcuI CTGAAG 1 cut(s) 110
AfaI GTAC 2 cut(s) 319, 585
AfeI AGCGCT 1 cut(s) 252
AflIII ACRYGT 1 cut(s) 586
AgsI TTSAA 6 cut(s) 272, 425, 548, 713, 864, 944
AjiI CACGTC 1 cut(s) 655
AjnI CCWGG 2 cut(s) 690, 883
AjuI GAANNNNNNNTTGG 2 cut(s) 362, 394
AleI CACNNNNGTG 1 cut(s) 818
AluBI AGCT 5 cut(s) 6, 139, 154, 488, 909
AluI AGCT 5 cut(s) 6, 139, 154, 488, 909
Alw21I GWGCWC 2 cut(s) 660, 720
Alw26I GTCTC 1 cut(s) 395
Alw44I GTGCAC 1 cut(s) 656
AlwI GGATC 7 cut(s) 64, 98, 111, 129, 428, 533, 546
AlwNI CAGNNNCTG 1 cut(s) 1121
Aor51HI AGCGCT 1 cut(s) 252
AoxI GGCC 7 cut(s) 63, 282, 354, 608, 706, 1005, 1047
ApaLI GTGCAC 1 cut(s) 656
ApeKI GCWGC 3 cut(s) 57, 993, 1035
ApoI RAATTY 1 cut(s) 559
Asp700I GAANNNNTTC 1 cut(s) 445
Asp718I GGTACC 1 cut(s) 317
AspLEI GCGC 2 cut(s) 253, 858
AspS9I GGNCC 2 cut(s) 64, 283
AsuC2I CCSGG 1 cut(s) 62
AsuHPI GGTGA 5 cut(s) 850, 979, 1021, 1063, 1104
AsuII TTCGAA 3 cut(s) 9, 614, 904
BaeGI GKGCMC 2 cut(s) 94, 660
BamHI GGATCC 2 cut(s) 103, 538
BanI GGYRCC 2 cut(s) 89, 317
BauI CACGAG 1 cut(s) 523
Bbv12I GWGCWC 2 cut(s) 660, 720
BbvI GCAGC 3 cut(s) 69, 1005, 1047
BccI CCATC 1 cut(s) 78
BceAI ACGGC 1 cut(s) 1062
BciT130I CCWGG 2 cut(s) 692, 885
BcnI CCSGG 1 cut(s) 62
BcoDI GTCTC 1 cut(s) 395
BfaI CTAG 5 cut(s) 294, 438, 464, 485, 489
BfmI CTRYAG 1 cut(s) 1033
BfoI RGCGCY 1 cut(s) 254
BfuAI ACCTGC 1 cut(s) 1040
BglII AGATCT 1 cut(s) 1197
BisI GCNGC 4 cut(s) 58, 345, 994, 1036
BlsI GCNGC 4 cut(s) 59, 346, 995, 1037
Bme1390I CCNGG 3 cut(s) 62, 692, 885
BmgBI CACGTC 1 cut(s) 655
BmgT120I GGNCC 2 cut(s) 64, 283
BmiI GGNNCC 5 cut(s) 91, 105, 165, 319, 540
BmrFI CCNGG 3 cut(s) 62, 692, 885
BmrI ACTGGG 1 cut(s) 348
BmsI GCATC 2 cut(s) 490, 777
BmuI ACTGGG 1 cut(s) 348
BpmI CTGGAG 1 cut(s) 350
Bpu14I TTCGAA 3 cut(s) 9, 614, 904
BpuEI CTTGAG 2 cut(s) 155, 179
BpuMI CCSGG 1 cut(s) 62
BsaAI YACGTR 1 cut(s) 587
BsaI GGTCTC 1 cut(s) 395
BsaJI CCNNGG 1 cut(s) 202
BsaWI WCCGGW 1 cut(s) 1066
Bse118I RCCGGY 1 cut(s) 989
Bse1I ACTGG 4 cut(s) 343, 580, 768, 1115
Bse3DI GCAATG 1 cut(s) 182
BseBI CCWGG 2 cut(s) 692, 885
BseDI CCNNGG 1 cut(s) 202
BseGI GGATG 1 cut(s) 89
BseMI GCAATG 1 cut(s) 182
BseMII CTCAG 3 cut(s) 44, 395, 521
BseNI ACTGG 4 cut(s) 343, 580, 768, 1115
BseRI GAGGAG 2 cut(s) 12, 176
BseSI GKGCMC 2 cut(s) 94, 660
BseX3I CGGCCG 1 cut(s) 354
BseXI GCAGC 3 cut(s) 69, 1005, 1047
BsgI GTGCAG 1 cut(s) 974
Bsh1285I CGRYCG 2 cut(s) 357, 1098
BshFI GGCC 7 cut(s) 65, 284, 356, 610, 708, 1007, 1049
BshNI GGYRCC 2 cut(s) 89, 317
BsiEI CGRYCG 2 cut(s) 357, 1098
BsiHKAI GWGCWC 2 cut(s) 660, 720
BsiSI CCGG 9 cut(s) 62, 990, 997, 1004, 1018, 1039, 1046, 1067, 1151
BslFI GGGAC 5 cut(s) 158, 195, 383, 1142, 1193
BsmAI GTCTC 1 cut(s) 395
BsmFI GGGAC 5 cut(s) 158, 195, 383, 1142, 1193
BsnI GGCC 7 cut(s) 65, 284, 356, 610, 708, 1007, 1049
Bso31I GGTCTC 1 cut(s) 395
Bsp119I TTCGAA 3 cut(s) 9, 614, 904
Bsp1286I GDGCHC 3 cut(s) 94, 660, 720
Bsp143I GATC 6 cut(s) 69, 103, 121, 433, 538, 1197
BspACI CCGC 2 cut(s) 47, 344
BspANI GGCC 7 cut(s) 65, 284, 356, 610, 708, 1007, 1049
BspCNI CTCAG 3 cut(s) 45, 396, 522
BspLI GGNNCC 5 cut(s) 91, 105, 165, 319, 540
BspMAI CTGCAG 1 cut(s) 1037
BspMI ACCTGC 1 cut(s) 1040
BspPI GGATC 7 cut(s) 64, 98, 111, 129, 428, 533, 546
BspT104I TTCGAA 3 cut(s) 9, 614, 904
BspT107I GGYRCC 2 cut(s) 89, 317
BspTNI GGTCTC 1 cut(s) 395
BsrDI GCAATG 1 cut(s) 182
BsrFI RCCGGY 1 cut(s) 989
BsrI ACTGG 4 cut(s) 343, 580, 768, 1115
BssAI RCCGGY 1 cut(s) 989
BssECI CCNNGG 1 cut(s) 202
BssMI GATC 6 cut(s) 69, 103, 121, 433, 538, 1197
BssNAI GTATAC 1 cut(s) 592
BssSI CACGAG 1 cut(s) 523
Bst1107I GTATAC 1 cut(s) 592
Bst2BI CACGAG 1 cut(s) 523
Bst2UI CCWGG 2 cut(s) 692, 885
Bst4CI ACNGT 5 cut(s) 668, 742, 896, 973, 1099
BstBAI YACGTR 1 cut(s) 587
BstBI TTCGAA 3 cut(s) 9, 614, 904
BstC8I GCNNGC 2 cut(s) 152, 792
BstDEI CTNAG 3 cut(s) 53, 404, 530
BstDSI CCRYGG 1 cut(s) 202
BstEII GGTNACC 3 cut(s) 985, 1027, 1069
BstF5I GGATG 1 cut(s) 89
BstH2I RGCGCY 1 cut(s) 254
BstHHI GCGC 2 cut(s) 253, 858
BstKTI GATC 6 cut(s) 72, 106, 124, 436, 541, 1200
BstMAI GTCTC 1 cut(s) 395
BstMBI GATC 6 cut(s) 69, 103, 121, 433, 538, 1197
BstMCI CGRYCG 2 cut(s) 357, 1098
BstMWI GCNNNNNNNGC 2 cut(s) 172, 353
BstNI CCWGG 2 cut(s) 692, 885
BstPI GGTNACC 3 cut(s) 985, 1027, 1069
BstSCI CCNGG 3 cut(s) 60, 690, 883
BstSFI CTRYAG 1 cut(s) 1033
BstSLI GKGCMC 2 cut(s) 94, 660
BstV1I GCAGC 3 cut(s) 69, 1005, 1047
BstX2I RGATCY 5 cut(s) 69, 103, 121, 538, 1197
BstXI CCANNNNNNTGG 1 cut(s) 763
BstYI RGATCY 5 cut(s) 69, 103, 121, 538, 1197
BstZ17I GTATAC 1 cut(s) 592
BstZI CGGCCG 1 cut(s) 354
BsuRI GGCC 7 cut(s) 65, 284, 356, 610, 708, 1007, 1049
BtgI CCRYGG 1 cut(s) 202
BtgZI GCGATG 1 cut(s) 816
BtrI CACGTC 1 cut(s) 655
BtsCI GGATG 1 cut(s) 89
BtsIMutI CAGTG 7 cut(s) 50, 134, 660, 737, 738, 761, 901
BveI ACCTGC 1 cut(s) 1040
Cac8I GCNNGC 2 cut(s) 152, 792
CaiI CAGNNNCTG 1 cut(s) 1121
CfoI GCGC 2 cut(s) 253, 858
Cfr10I RCCGGY 1 cut(s) 989
Cfr13I GGNCC 2 cut(s) 64, 283
Csp6I GTAC 2 cut(s) 318, 584
CviAII CATG 2 cut(s) 458, 642
CviQI GTAC 2 cut(s) 318, 584
DdeI CTNAG 3 cut(s) 53, 404, 530
DpnI GATC 6 cut(s) 71, 105, 123, 435, 540, 1199
DpnII GATC 6 cut(s) 69, 103, 121, 433, 538, 1197
DraI TTTAAA 1 cut(s) 511
EaeI YGGCCR 3 cut(s) 354, 1005, 1047
EagI CGGCCG 1 cut(s) 354
EclXI CGGCCG 1 cut(s) 354
Eco31I GGTCTC 1 cut(s) 395
Eco47III AGCGCT 1 cut(s) 252
Eco52I CGGCCG 1 cut(s) 354
Eco57I CTGAAG 1 cut(s) 110
Eco91I GGTNACC 3 cut(s) 985, 1027, 1069
EcoO109I RGGNCCY 1 cut(s) 283
EcoO65I GGTNACC 3 cut(s) 985, 1027, 1069
EcoRII CCWGG 2 cut(s) 690, 883
FaeI CATG 2 cut(s) 461, 645
FaqI GGGAC 5 cut(s) 158, 195, 383, 1142, 1193
FatI CATG 2 cut(s) 457, 641
FblI GTMKAC 2 cut(s) 591, 1125
Fnu4HI GCNGC 4 cut(s) 58, 345, 994, 1036
FokI GGATG 1 cut(s) 96
Fsp4HI GCNGC 4 cut(s) 58, 345, 994, 1036
FspBI CTAG 5 cut(s) 294, 438, 464, 485, 489
GlaI GCGC 2 cut(s) 252, 857
GluI GCNGC 4 cut(s) 58, 345, 994, 1036
GsuI CTGGAG 1 cut(s) 350
HaeII RGCGCY 1 cut(s) 254
HaeIII GGCC 7 cut(s) 65, 284, 356, 610, 708, 1007, 1049
HapII CCGG 9 cut(s) 62, 990, 997, 1004, 1018, 1039, 1046, 1067, 1151
HhaI GCGC 2 cut(s) 253, 858
Hin1II CATG 2 cut(s) 461, 645
Hin6I GCGC 2 cut(s) 251, 856
HinP1I GCGC 2 cut(s) 251, 856
HincII GTYRAC 3 cut(s) 199, 410, 1092
HindII GTYRAC 3 cut(s) 199, 410, 1092
HindIII AAGCTT 1 cut(s) 152
HpaI GTTAAC 1 cut(s) 1092
HpaII CCGG 9 cut(s) 62, 990, 997, 1004, 1018, 1039, 1046, 1067, 1151
HphI GGTGA 5 cut(s) 850, 979, 1021, 1063, 1104
Hpy188I TCNGA 4 cut(s) 103, 405, 568, 1140
Hpy188III TCNNGA 5 cut(s) 81, 158, 212, 367, 944
Hpy99I CGWCG 2 cut(s) 119, 1103
HpyAV CCTTC 2 cut(s) 380, 621
HpyCH4III ACNGT 5 cut(s) 668, 742, 896, 973, 1099
HpyCH4IV ACGT 3 cut(s) 396, 586, 654
HpyCH4V TGCA 6 cut(s) 150, 641, 658, 790, 955, 1035
HpyF10VI GCNNNNNNNGC 2 cut(s) 172, 353
HpyF3I CTNAG 3 cut(s) 53, 404, 530
HpySE526I ACGT 3 cut(s) 396, 586, 654
Hsp92II CATG 2 cut(s) 461, 645
HspAI GCGC 2 cut(s) 251, 856
KpnI GGTACC 1 cut(s) 321
KspAI GTTAAC 1 cut(s) 1092
Kzo9I GATC 6 cut(s) 69, 103, 121, 433, 538, 1197
LmnI GCTCC 1 cut(s) 163
Lsp1109I GCAGC 3 cut(s) 69, 1005, 1047
LweI GCATC 2 cut(s) 490, 777
MaeI CTAG 5 cut(s) 294, 438, 464, 485, 489
MaeII ACGT 3 cut(s) 396, 586, 654
MaeIII GTNAC 3 cut(s) 985, 1027, 1069
MalI GATC 6 cut(s) 71, 105, 123, 435, 540, 1199
MboI GATC 6 cut(s) 69, 103, 121, 433, 538, 1197
MboII GAAGA 2 cut(s) 116, 479
MfeI CAATTG 1 cut(s) 543
MflI RGATCY 5 cut(s) 69, 103, 121, 538, 1197
MhlI GDGCHC 3 cut(s) 94, 660, 720
MluCI AATT 6 cut(s) 376, 441, 492, 543, 559, 864
MlyI GAGTC 3 cut(s) 235, 415, 563
MmeI TCCRAC 3 cut(s) 67, 359, 1061
MroXI GAANNNNTTC 1 cut(s) 445
MseI TTAA 3 cut(s) 96, 510, 1091
MslI CAYNNNNRTG 1 cut(s) 818
MspI CCGG 9 cut(s) 62, 990, 997, 1004, 1018, 1039, 1046, 1067, 1151
MspR9I CCNGG 3 cut(s) 62, 692, 885
MunI CAATTG 1 cut(s) 543
MvaI CCWGG 2 cut(s) 692, 885
MwoI GCNNNNNNNGC 2 cut(s) 172, 353
NciI CCSGG 1 cut(s) 62
NdeII GATC 6 cut(s) 69, 103, 121, 433, 538, 1197
NlaIII CATG 2 cut(s) 461, 645
NlaIV GGNNCC 5 cut(s) 91, 105, 165, 319, 540
NmuCI GTSAC 3 cut(s) 985, 1027, 1069
NspV TTCGAA 3 cut(s) 9, 614, 904
OliI CACNNNNGTG 1 cut(s) 818
PaqCI CACCTGC 1 cut(s) 1040
PcsI WCGNNNNNNNCGW 1 cut(s) 592
PdmI GAANNNNTTC 1 cut(s) 445
PfeI GAWTC 8 cut(s) 11, 77, 272, 569, 901, 1000, 1042, 1063
PflFI GACNNNGTC 1 cut(s) 698
PflMI CCANNNNNTGG 1 cut(s) 1080
PkrI GCNGC 4 cut(s) 59, 346, 995, 1037
PleI GAGTC 3 cut(s) 234, 414, 562
PpsI GAGTC 3 cut(s) 234, 414, 562
Ppu21I YACGTR 1 cut(s) 587
Psp6I CCWGG 2 cut(s) 690, 883
PspEI GGTNACC 3 cut(s) 985, 1027, 1069
PspGI CCWGG 2 cut(s) 690, 883
PspN4I GGNNCC 5 cut(s) 91, 105, 165, 319, 540
PspPI GGNCC 2 cut(s) 64, 283
PstI CTGCAG 1 cut(s) 1037
PstNI CAGNNNCTG 1 cut(s) 1121
PsuI RGATCY 5 cut(s) 69, 103, 121, 538, 1197
PsyI GACNNNGTC 1 cut(s) 698
RsaI GTAC 2 cut(s) 319, 585
RsaNI GTAC 2 cut(s) 318, 584
RseI CAYNNNNRTG 1 cut(s) 818
SaqAI TTAA 3 cut(s) 96, 510, 1091
SatI GCNGC 4 cut(s) 58, 345, 994, 1036
Sau3AI GATC 6 cut(s) 69, 103, 121, 433, 538, 1197
Sau96I GGNCC 2 cut(s) 64, 283
SchI GAGTC 3 cut(s) 235, 415, 563
ScrFI CCNGG 3 cut(s) 62, 692, 885
SduI GDGCHC 3 cut(s) 94, 660, 720
SfaNI GCATC 2 cut(s) 490, 777
SfcI CTRYAG 1 cut(s) 1033
SfuI TTCGAA 3 cut(s) 9, 614, 904
SmiMI CAYNNNNRTG 1 cut(s) 818
SmlI CTYRAG 2 cut(s) 134, 158
SmoI CTYRAG 2 cut(s) 134, 158
Sse9I AATT 6 cut(s) 376, 441, 492, 543, 559, 864
SsiI CCGC 2 cut(s) 47, 344
SspMI CTAG 5 cut(s) 294, 438, 464, 485, 489
StyD4I CCNGG 3 cut(s) 60, 690, 883
TaaI ACNGT 5 cut(s) 668, 742, 896, 973, 1099
TaiI ACGT 3 cut(s) 399, 589, 657
TaqI TCGA 7 cut(s) 9, 75, 384, 418, 614, 904, 1101
TaqII GACCGA 1 cut(s) 1015
TasI AATT 6 cut(s) 376, 441, 492, 543, 559, 864
TauI GCSGC 1 cut(s) 347
TfiI GAWTC 8 cut(s) 11, 77, 272, 569, 901, 1000, 1042, 1063
Tru1I TTAA 3 cut(s) 96, 510, 1091
Tru9I TTAA 3 cut(s) 96, 510, 1091
TscAI CASTG 7 cut(s) 57, 134, 667, 737, 745, 768, 901
TseFI GTSAC 3 cut(s) 985, 1027, 1069
TseI GCWGC 3 cut(s) 57, 993, 1035
Tsp45I GTSAC 3 cut(s) 985, 1027, 1069
TspDTI ATGAA 1 cut(s) 822
TspGWI ACGGA 3 cut(s) 219, 661, 1097
TspRI CASTG 7 cut(s) 57, 134, 667, 737, 745, 768, 901
Tth111I GACNNNGTC 1 cut(s) 698
Van91I CCANNNNNTGG 1 cut(s) 1080
VneI GTGCAC 1 cut(s) 656
XapI RAATTY 1 cut(s) 559
XmiI GTMKAC 2 cut(s) 591, 1125
XmnI GAANNNNTTC 1 cut(s) 445
XspI CTAG 5 cut(s) 294, 438, 464, 485, 489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.