Ethylene-responsive protein kinase Le-CTR1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g29700 |
| rosa_chinensis | RchiOBHm_Chr4g0437941 |
| rosa_laevigata | RLG00000006400 |
| rosa_multiflora | Rmu_co8239215.1_g000001 Rmu_co8446239.1_g000001 Rmu_sc0025141.1_g000002 Rmu_sc0028618.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00379100 |
| rosa_rugosa | Rorug04G0305700 |
| rosa_samantha | Rh4AG346600 Rh4AG357300 Rh4BG368200 Rh4CG382300 Rh4DG349200 Rh4DG363100 |
| rosa_wichuraiana | Rw0G011540 Rw0G016130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2024 |
| AatII | GACGTC | 3 cut(s) | 108, 159, 686 |
| Acc36I | ACCTGC | 1 cut(s) | 2024 |
| Acc65I | GGTACC | 1 cut(s) | 2948 |
| AccB1I | GGYRCC | 2 cut(s) | 2948, 2986 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 121, 1289 |
| AccBSI | CCGCTC | 2 cut(s) | 2118, 2984 |
| AccIII | TCCGGA | 4 cut(s) | 487, 723, 1226, 3188 |
| AciI | CCGC | 8 cut(s) | 341, 404, 1674, 1712, 1797, 2116, 2984, 3386 |
| AcoI | YGGCCR | 1 cut(s) | 112 |
| AcsI | RAATTY | 8 cut(s) | 350, 727, 1089, 1456, 1639, 1652, 1756, 1821 |
| AcuI | CTGAAG | 6 cut(s) | 229, 257, 383, 2556, 2679, 2978 |
| AcyI | GRCGYC | 3 cut(s) | 105, 156, 683 |
| AfeI | AGCGCT | 1 cut(s) | 360 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 121, 487, 1289, 2280, 2426, 3188 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3136 |
| AjiI | CACGTC | 1 cut(s) | 1718 |
| AjnI | CCWGG | 5 cut(s) | 120, 657, 943, 2259, 2710 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 515, 547 |
| Alw21I | GWGCWC | 3 cut(s) | 378, 401, 943 |
| Alw26I | GTCTC | 4 cut(s) | 112, 1960, 2312, 2889 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2375, 3326 |
| Ama87I | CYCGRG | 2 cut(s) | 1077, 2229 |
| Aor13HI | TCCGGA | 4 cut(s) | 487, 723, 1226, 3188 |
| Aor51HI | AGCGCT | 1 cut(s) | 360 |
| AoxI | GGCC | 2 cut(s) | 112, 1724 |
| ApoI | RAATTY | 8 cut(s) | 350, 727, 1089, 1456, 1639, 1652, 1756, 1821 |
| AseI | ATTAAT | 1 cut(s) | 2043 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 242 |
| Asp718I | GGTACC | 1 cut(s) | 2948 |
| AspLEI | GCGC | 2 cut(s) | 361, 3265 |
| AspS9I | GGNCC | 1 cut(s) | 1979 |
| AsuC2I | CCSGG | 1 cut(s) | 555 |
| AsuHPI | GGTGA | 9 cut(s) | 884, 1139, 1193, 1349, 1403, 1478, 1514, 2045, 2813 |
| AsuII | TTCGAA | 1 cut(s) | 1460 |
| AvaI | CYCGRG | 2 cut(s) | 1077, 2229 |
| AvaII | GGWCC | 1 cut(s) | 1979 |
| AxyI | CCTNAGG | 1 cut(s) | 624 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2940, 2973 |
| BamHI | GGATCC | 2 cut(s) | 1229, 1442 |
| BanI | GGYRCC | 2 cut(s) | 2948, 2986 |
| BanII | GRGCYC | 3 cut(s) | 378, 943, 2692 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2582, 2614 |
| BauI | CACGAG | 1 cut(s) | 1773 |
| BbsI | GAAGAC | 4 cut(s) | 48, 236, 551, 1682 |
| Bbv12I | GWGCWC | 3 cut(s) | 378, 401, 943 |
| BbvCI | CCTCAGC | 1 cut(s) | 1369 |
| BceAI | ACGGC | 2 cut(s) | 1711, 1836 |
| BciT130I | CCWGG | 5 cut(s) | 122, 659, 945, 2261, 2712 |
| BciVI | GTATCC | 3 cut(s) | 1165, 1375, 2249 |
| BclI | TGATCA | 1 cut(s) | 1612 |
| BcnI | CCSGG | 1 cut(s) | 555 |
| BcoDI | GTCTC | 4 cut(s) | 112, 1960, 2312, 2889 |
| BfaI | CTAG | 8 cut(s) | 299, 645, 893, 1311, 1328, 2025, 2147, 3456 |
| BfmI | CTRYAG | 3 cut(s) | 1035, 1113, 2154 |
| BfoI | RGCGCY | 2 cut(s) | 362, 3266 |
| BfuAI | ACCTGC | 1 cut(s) | 2024 |
| BfuI | GTATCC | 3 cut(s) | 1165, 1375, 2249 |
| BlpI | GCTNAGC | 2 cut(s) | 716, 847 |
| Bme1390I | CCNGG | 6 cut(s) | 122, 555, 659, 945, 2261, 2712 |
| Bme18I | GGWCC | 1 cut(s) | 1979 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3136 |
| BmeT110I | CYCGRG | 2 cut(s) | 1077, 2229 |
| BmgBI | CACGTC | 1 cut(s) | 1718 |
| BmgT120I | GGNCC | 1 cut(s) | 1979 |
| BmrFI | CCNGG | 6 cut(s) | 122, 555, 659, 945, 2261, 2712 |
| BpiI | GAAGAC | 4 cut(s) | 48, 236, 551, 1682 |
| BpmI | CTGGAG | 5 cut(s) | 392, 927, 1760, 3063, 3324 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1369, 2608 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 716, 847 |
| Bpu14I | TTCGAA | 1 cut(s) | 1460 |
| BpuEI | CTTGAG | 3 cut(s) | 419, 722, 1244 |
| BpuMI | CCSGG | 1 cut(s) | 555 |
| BsaHI | GRCGYC | 3 cut(s) | 105, 156, 683 |
| BsaJI | CCNNGG | 1 cut(s) | 381 |
| BsaWI | WCCGGW | 4 cut(s) | 487, 723, 1226, 3188 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 423, 453, 907, 937 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 121, 487, 1289, 2280, 2426, 3188 |
| Bse1I | ACTGG | 6 cut(s) | 1374, 1743, 2294, 2865, 3126, 3287 |
| Bse21I | CCTNAGG | 1 cut(s) | 624 |
| Bse3DI | GCAATG | 4 cut(s) | 1546, 1905, 2192, 2835 |
| BseAI | TCCGGA | 4 cut(s) | 487, 723, 1226, 3188 |
| BseBI | CCWGG | 5 cut(s) | 122, 659, 945, 2261, 2712 |
| BseDI | CCNNGG | 1 cut(s) | 381 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 121, 487, 1289, 2280, 2426, 3188 |
| BseMI | GCAATG | 4 cut(s) | 1546, 1905, 2192, 2835 |
| BseMII | CTCAG | 9 cut(s) | 615, 861, 1383, 2115, 2307, 2325, 3080, 3366, 3396 |
| BseNI | ACTGG | 6 cut(s) | 1374, 1743, 2294, 2865, 3126, 3287 |
| BseRI | GAGGAG | 3 cut(s) | 431, 3030, 3392 |
| BsgI | GTGCAG | 3 cut(s) | 329, 2186, 2841 |
| Bsh1285I | CGRYCG | 1 cut(s) | 135 |
| BshFI | GGCC | 2 cut(s) | 114, 1726 |
| BshNI | GGYRCC | 2 cut(s) | 2948, 2986 |
| BsiEI | CGRYCG | 1 cut(s) | 135 |
| BsiHKAI | GWGCWC | 3 cut(s) | 378, 401, 943 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1077, 2229 |
| BslFI | GGGAC | 3 cut(s) | 1728, 2581, 2798 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 121, 487, 1289, 2280, 2426, 3188 |
| BsmAI | GTCTC | 4 cut(s) | 112, 1960, 2312, 2889 |
| BsmBI | CGTCTC | 2 cut(s) | 112, 1960 |
| BsmFI | GGGAC | 3 cut(s) | 1728, 2581, 2798 |
| BsmI | GAATGC | 4 cut(s) | 308, 580, 2872, 3007 |
| BsnI | GGCC | 2 cut(s) | 114, 1726 |
| BsoBI | CYCGRG | 2 cut(s) | 1077, 2229 |
| Bsp119I | TTCGAA | 1 cut(s) | 1460 |
| Bsp1286I | GDGCHC | 4 cut(s) | 378, 401, 943, 2692 |
| Bsp13I | TCCGGA | 4 cut(s) | 487, 723, 1226, 3188 |
| Bsp1407I | TGTACA | 1 cut(s) | 186 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 716, 847 |
| BspACI | CCGC | 8 cut(s) | 341, 404, 1674, 1712, 1797, 2116, 2984, 3386 |
| BspANI | GGCC | 2 cut(s) | 114, 1726 |
| BspCNI | CTCAG | 9 cut(s) | 616, 860, 1382, 2114, 2308, 2324, 3081, 3367, 3397 |
| BspEI | TCCGGA | 4 cut(s) | 487, 723, 1226, 3188 |
| BspHI | TCATGA | 1 cut(s) | 1627 |
| BspMAI | CTGCAG | 2 cut(s) | 1039, 1117 |
| BspMI | ACCTGC | 1 cut(s) | 2024 |
| BspT104I | TTCGAA | 1 cut(s) | 1460 |
| BspT107I | GGYRCC | 2 cut(s) | 2948, 2986 |
| BsrBI | CCGCTC | 2 cut(s) | 2118, 2984 |
| BsrDI | GCAATG | 4 cut(s) | 1546, 1905, 2192, 2835 |
| BsrGI | TGTACA | 1 cut(s) | 186 |
| BsrI | ACTGG | 6 cut(s) | 1374, 1743, 2294, 2865, 3126, 3287 |
| BssECI | CCNNGG | 1 cut(s) | 381 |
| BssNI | GRCGYC | 3 cut(s) | 105, 156, 683 |
| BssSI | CACGAG | 1 cut(s) | 1773 |
| BssT1I | CCWWGG | 1 cut(s) | 381 |
| Bst2BI | CACGAG | 1 cut(s) | 1773 |
| Bst2UI | CCWGG | 5 cut(s) | 122, 659, 945, 2261, 2712 |
| Bst4CI | ACNGT | 7 cut(s) | 67, 335, 1166, 1688, 2033, 2074, 2164 |
| Bst6I | CTCTTC | 1 cut(s) | 2997 |
| BstACI | GRCGYC | 3 cut(s) | 105, 156, 683 |
| BstAUI | TGTACA | 1 cut(s) | 186 |
| BstBI | TTCGAA | 1 cut(s) | 1460 |
| BstC8I | GCNNGC | 1 cut(s) | 3440 |
| BstH2I | RGCGCY | 2 cut(s) | 362, 3266 |
| BstHHI | GCGC | 2 cut(s) | 361, 3265 |
| BstMAI | GTCTC | 4 cut(s) | 112, 1960, 2312, 2889 |
| BstMCI | CGRYCG | 1 cut(s) | 135 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 367, 676, 1480, 1536, 1732, 2712, 3299 |
| BstNI | CCWGG | 5 cut(s) | 122, 659, 945, 2261, 2712 |
| BstNSI | RCATGY | 5 cut(s) | 1250, 1478, 2343, 2813, 3442 |
| BstSCI | CCNGG | 6 cut(s) | 120, 553, 657, 943, 2259, 2710 |
| BstSFI | CTRYAG | 3 cut(s) | 1035, 1113, 2154 |
| BstV2I | GAAGAC | 4 cut(s) | 48, 236, 551, 1682 |
| BstX2I | RGATCY | 7 cut(s) | 163, 312, 523, 1229, 1255, 1442, 2371 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1843 |
| BstYI | RGATCY | 7 cut(s) | 163, 312, 523, 1229, 1255, 1442, 2371 |
| Bsu36I | CCTNAGG | 1 cut(s) | 624 |
| BsuI | GTATCC | 3 cut(s) | 1165, 1375, 2249 |
| BsuRI | GGCC | 2 cut(s) | 114, 1726 |
| BtgZI | GCGATG | 1 cut(s) | 193 |
| BtrI | CACGTC | 1 cut(s) | 1718 |
| BtsIMutI | CAGTG | 6 cut(s) | 1736, 1878, 2516, 2703, 2858, 3294 |
| BveI | ACCTGC | 1 cut(s) | 2024 |
| Cac8I | GCNNGC | 1 cut(s) | 3440 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2375, 3326 |
| CciI | TCATGA | 1 cut(s) | 1627 |
| CfoI | GCGC | 2 cut(s) | 361, 3265 |
| Cfr13I | GGNCC | 1 cut(s) | 1979 |
| CseI | GACGC | 2 cut(s) | 241, 1977 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2442, 2477 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3136 |
| EaeI | YGGCCR | 1 cut(s) | 112 |
| Eam1104I | CTCTTC | 1 cut(s) | 2997 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3136 |
| EarI | CTCTTC | 1 cut(s) | 2997 |
| Ecl136II | GAGCTC | 2 cut(s) | 376, 941 |
| Eco130I | CCWWGG | 1 cut(s) | 381 |
| Eco24I | GRGCYC | 3 cut(s) | 378, 943, 2692 |
| Eco32I | GATATC | 2 cut(s) | 2098, 2676 |
| Eco47I | GGWCC | 1 cut(s) | 1979 |
| Eco47III | AGCGCT | 1 cut(s) | 360 |
| Eco53kI | GAGCTC | 2 cut(s) | 376, 941 |
| Eco57I | CTGAAG | 6 cut(s) | 229, 257, 383, 2556, 2679, 2978 |
| Eco81I | CCTNAGG | 1 cut(s) | 624 |
| Eco88I | CYCGRG | 2 cut(s) | 1077, 2229 |
| EcoICRI | GAGCTC | 2 cut(s) | 376, 941 |
| EcoRI | GAATTC | 1 cut(s) | 1456 |
| EcoRII | CCWGG | 5 cut(s) | 120, 657, 943, 2259, 2710 |
| EcoRV | GATATC | 2 cut(s) | 2098, 2676 |
| EcoT14I | CCWWGG | 1 cut(s) | 381 |
| EcoT22I | ATGCAT | 3 cut(s) | 308, 2341, 3102 |
| EcoT38I | GRGCYC | 3 cut(s) | 378, 943, 2692 |
| ErhI | CCWWGG | 1 cut(s) | 381 |
| Esp3I | CGTCTC | 2 cut(s) | 112, 1960 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2406, 2438 |
| FaqI | GGGAC | 3 cut(s) | 1728, 2581, 2798 |
| FauI | CCCGC | 1 cut(s) | 1705 |
| FbaI | TGATCA | 1 cut(s) | 1612 |
| FriOI | GRGCYC | 3 cut(s) | 378, 943, 2692 |
| FspBI | CTAG | 8 cut(s) | 299, 645, 893, 1311, 1328, 2025, 2147, 3456 |
| GlaI | GCGC | 2 cut(s) | 360, 3264 |
| GsuI | CTGGAG | 5 cut(s) | 392, 927, 1760, 3063, 3324 |
| HaeII | RGCGCY | 2 cut(s) | 362, 3266 |
| HaeIII | GGCC | 2 cut(s) | 114, 1726 |
| HgaI | GACGC | 2 cut(s) | 241, 1977 |
| HhaI | GCGC | 2 cut(s) | 361, 3265 |
| Hin1I | GRCGYC | 3 cut(s) | 105, 156, 683 |
| Hin6I | GCGC | 2 cut(s) | 359, 3263 |
| HinP1I | GCGC | 2 cut(s) | 359, 3263 |
| HincII | GTYRAC | 5 cut(s) | 1105, 2308, 3130, 3168, 3246 |
| HindII | GTYRAC | 5 cut(s) | 1105, 2308, 3130, 3168, 3246 |
| HpaI | GTTAAC | 2 cut(s) | 1105, 3246 |
| HphI | GGTGA | 9 cut(s) | 884, 1139, 1193, 1349, 1403, 1478, 1514, 2045, 2813 |
| Hpy166II | GTNNAC | 7 cut(s) | 187, 1105, 2036, 2308, 3130, 3168, 3246 |
| Hpy8I | GTNNAC | 7 cut(s) | 187, 1105, 2036, 2308, 3130, 3168, 3246 |
| HpyAV | CCTTC | 9 cut(s) | 358, 491, 783, 982, 1058, 1118, 1234, 2703, 3161 |
| HpyCH4III | ACNGT | 7 cut(s) | 67, 335, 1166, 1688, 2033, 2074, 2164 |
| HpyCH4IV | ACGT | 6 cut(s) | 105, 156, 683, 1606, 1664, 1717 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 367, 676, 1480, 1536, 1732, 2712, 3299 |
| HpySE526I | ACGT | 6 cut(s) | 105, 156, 683, 1606, 1664, 1717 |
| Hsp92I | GRCGYC | 3 cut(s) | 105, 156, 683 |
| HspAI | GCGC | 2 cut(s) | 359, 3263 |
| Kpn2I | TCCGGA | 4 cut(s) | 487, 723, 1226, 3188 |
| KpnI | GGTACC | 1 cut(s) | 2952 |
| Ksp22I | TGATCA | 1 cut(s) | 1612 |
| KspAI | GTTAAC | 2 cut(s) | 1105, 3246 |
| MaeI | CTAG | 8 cut(s) | 299, 645, 893, 1311, 1328, 2025, 2147, 3456 |
| MaeII | ACGT | 6 cut(s) | 105, 156, 683, 1606, 1664, 1717 |
| MaeIII | GTNAC | 4 cut(s) | 385, 1024, 2774, 3223 |
| MbiI | CCGCTC | 2 cut(s) | 2118, 2984 |
| MflI | RGATCY | 7 cut(s) | 163, 312, 523, 1229, 1255, 1442, 2371 |
| MhlI | GDGCHC | 4 cut(s) | 378, 401, 943, 2692 |
| MlyI | GAGTC | 7 cut(s) | 86, 426, 824, 1763, 2303, 2314, 3400 |
| MmeI | TCCRAC | 9 cut(s) | 630, 819, 881, 888, 1794, 2306, 3037, 3237, 3422 |
| Mph1103I | ATGCAT | 3 cut(s) | 308, 2341, 3102 |
| MroI | TCCGGA | 4 cut(s) | 487, 723, 1226, 3188 |
| MroXI | GAANNNNTTC | 1 cut(s) | 242 |
| MslI | CAYNNNNRTG | 5 cut(s) | 394, 977, 1626, 2683, 3145 |
| MspA1I | CMGCKG | 6 cut(s) | 343, 1797, 2315, 2942, 3302, 3404 |
| MspR9I | CCNGG | 6 cut(s) | 122, 555, 659, 945, 2261, 2712 |
| Mva1269I | GAATGC | 4 cut(s) | 308, 580, 2872, 3007 |
| MvaI | CCWGG | 5 cut(s) | 122, 659, 945, 2261, 2712 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 367, 676, 1480, 1536, 1732, 2712, 3299 |
| NciI | CCSGG | 1 cut(s) | 555 |
| NmeAIII | GCCGAG | 1 cut(s) | 380 |
| NmuCI | GTSAC | 2 cut(s) | 385, 3223 |
| NsiI | ATGCAT | 3 cut(s) | 308, 2341, 3102 |
| NspI | RCATGY | 5 cut(s) | 1250, 1478, 2343, 2813, 3442 |
| NspV | TTCGAA | 1 cut(s) | 1460 |
| PaeI | GCATGC | 1 cut(s) | 3442 |
| PaeR7I | CTCGAG | 2 cut(s) | 1077, 2229 |
| PagI | TCATGA | 1 cut(s) | 1627 |
| PaqCI | CACCTGC | 1 cut(s) | 2024 |
| PctI | GAATGC | 4 cut(s) | 308, 580, 2872, 3007 |
| PdmI | GAANNNNTTC | 1 cut(s) | 242 |
| PfeI | GAWTC | 7 cut(s) | 59, 733, 875, 1031, 1279, 1297, 3382 |
| PflFI | GACNNNGTC | 1 cut(s) | 155 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 121, 1289 |
| PfoI | TCCNGGA | 1 cut(s) | 943 |
| Ple19I | CGATCG | 1 cut(s) | 135 |
| PleI | GAGTC | 7 cut(s) | 86, 426, 823, 1763, 2303, 2314, 3399 |
| PpsI | GAGTC | 7 cut(s) | 86, 426, 823, 1763, 2303, 2314, 3399 |
| PshBI | ATTAAT | 1 cut(s) | 2043 |
| Psp124BI | GAGCTC | 2 cut(s) | 378, 943 |
| Psp6I | CCWGG | 5 cut(s) | 120, 657, 943, 2259, 2710 |
| PspGI | CCWGG | 5 cut(s) | 120, 657, 943, 2259, 2710 |
| PspPI | GGNCC | 1 cut(s) | 1979 |
| PspXI | VCTCGAGB | 1 cut(s) | 2229 |
| PstI | CTGCAG | 2 cut(s) | 1039, 1117 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2375, 3326 |
| PsuI | RGATCY | 7 cut(s) | 163, 312, 523, 1229, 1255, 1442, 2371 |
| PsyI | GACNNNGTC | 1 cut(s) | 155 |
| PvuI | CGATCG | 1 cut(s) | 135 |
| PvuII | CAGCTG | 4 cut(s) | 2315, 2942, 3302, 3404 |
| RseI | CAYNNNNRTG | 5 cut(s) | 394, 977, 1626, 2683, 3145 |
| SacI | GAGCTC | 2 cut(s) | 378, 943 |
| Sau96I | GGNCC | 1 cut(s) | 1979 |
| SchI | GAGTC | 7 cut(s) | 86, 426, 824, 1763, 2303, 2314, 3400 |
| ScrFI | CCNGG | 6 cut(s) | 122, 555, 659, 945, 2261, 2712 |
| SduI | GDGCHC | 4 cut(s) | 378, 401, 943, 2692 |
| SfcI | CTRYAG | 3 cut(s) | 1035, 1113, 2154 |
| Sfr274I | CTCGAG | 2 cut(s) | 1077, 2229 |
| SfuI | TTCGAA | 1 cut(s) | 1460 |
| SinI | GGWCC | 1 cut(s) | 1979 |
| SlaI | CTCGAG | 2 cut(s) | 1077, 2229 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 394, 977, 1626, 2683, 3145 |
| SmlI | CTYRAG | 5 cut(s) | 434, 737, 1077, 1259, 2229 |
| SmoI | CTYRAG | 5 cut(s) | 434, 737, 1077, 1259, 2229 |
| SphI | GCATGC | 1 cut(s) | 3442 |
| SsiI | CCGC | 8 cut(s) | 341, 404, 1674, 1712, 1797, 2116, 2984, 3386 |
| SspI | AATATT | 3 cut(s) | 2287, 2381, 3112 |
| SspMI | CTAG | 8 cut(s) | 299, 645, 893, 1311, 1328, 2025, 2147, 3456 |
| SstI | GAGCTC | 2 cut(s) | 378, 943 |
| StyD4I | CCNGG | 6 cut(s) | 120, 553, 657, 943, 2259, 2710 |
| StyI | CCWWGG | 1 cut(s) | 381 |
| TaaI | ACNGT | 7 cut(s) | 67, 335, 1166, 1688, 2033, 2074, 2164 |
| TaiI | ACGT | 6 cut(s) | 108, 159, 686, 1609, 1667, 1720 |
| TatI | WGTACW | 6 cut(s) | 186, 741, 1618, 2598, 2748, 3371 |
| TauI | GCSGC | 2 cut(s) | 343, 1677 |
| TfiI | GAWTC | 7 cut(s) | 59, 733, 875, 1031, 1279, 1297, 3382 |
| TscAI | CASTG | 6 cut(s) | 1743, 1885, 2516, 2703, 2865, 3294 |
| TseFI | GTSAC | 2 cut(s) | 385, 3223 |
| Tsp45I | GTSAC | 2 cut(s) | 385, 3223 |
| TspGWI | ACGGA | 5 cut(s) | 7, 820, 1978, 2422, 3293 |
| TspRI | CASTG | 6 cut(s) | 1743, 1885, 2516, 2703, 2865, 3294 |
| Tth111I | GACNNNGTC | 1 cut(s) | 155 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 121, 1289 |
| VpaK11BI | GGWCC | 1 cut(s) | 1979 |
| VspI | ATTAAT | 1 cut(s) | 2043 |
| XapI | RAATTY | 8 cut(s) | 350, 727, 1089, 1456, 1639, 1652, 1756, 1821 |
| XceI | RCATGY | 5 cut(s) | 1250, 1478, 2343, 2813, 3442 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 607 |
| XhoI | CTCGAG | 2 cut(s) | 1077, 2229 |
| XmnI | GAANNNNTTC | 1 cut(s) | 242 |
| XspI | CTAG | 8 cut(s) | 299, 645, 893, 1311, 1328, 2025, 2147, 3456 |
| ZraI | GACGTC | 3 cut(s) | 106, 157, 684 |
| Zsp2I | ATGCAT | 3 cut(s) | 308, 2341, 3102 |