Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0025325.1

Orthogroup ID

OG0008097

Physical Location & Seq

Genomic Coordinates Reverse (-)

16086 .. 21043

Gene Structure 4958 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0025325.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

atggaggacattgacgctatggcagcccgattggcgtcgtctttggcactggcggaggggaaaagagcagtggatctgaggccatccaagggcaagggtctacgccaaccggaggtgtatatagttggcaagttactcacggcaagggagtataggaaccgttcttttttggggatgtttcgatctacatggcatgttggtggagatctgcgggtggagccggcagcaggggaccaagttcttttctcattctcggatccggtggaccgcgctcttgtgtggcgtggcggtctgtggggtttcaacctagcccctgtagcactagcagcatatgatgggatcgaaccagtcgaacaagtgctgctgcaacgctcttcctattgggttatgttgttggatgtgccgccggcgttccgatttgaaagagtgatgcgcatgattggcagcaccattggtgatctgaaggagtgggaccgacctgctttccggcgaggtgtactgcgggtcagggtggagatcgagttttcacagcccatacttactcaacgtctctttcggttggaggatcgagtggaggtgctggtgaggttccgtttcgacaaaatatttggcagatgcaacagctgtgggtttgtaacccatgtcgggttaccgtgctctggcccggtgatggaagatggggttggacatgacaggcctagtccggtggagcagcgtagcggtgctactgcaacaactttggcggttagagcatcagaggttagggcaaacccctgtggacctactttggtcttcaaggcacaagttccttctgggatagctgaaaccttggcgtctatgtctgcaggctctttccttcctcagaggcctcgacgtcaagtcaccatccgagaaattgaagaaaacaatgagcatgcatctccaattacggggactcagagggaaagaacatatgatgtttcggtgtctccgaagaagccaaggctgagtttggcaattggtaagcacaatattgatgctaccactatgggtttaattgcacctgctatgagtaagccaaacaagaagaagcgtggtcgacctactggtagtcttaacaagatgccatatggtactgctggtaagggaaaaaaaaactctgaggcaggtagtgagaagaagaagggtgccaaggcccgaaaaaacttaaatggggacttggcaactactggcgactccaaccctaaggggaaggagttgagcgaaccggtgaggcgaaagtgtgatttcgtgatggcggcggtgagcctcgtgcactccagaccaggcagaggcaagatgatagcggcgtgggcatggagaggctgtgctttcgaggcgtttgggctatgcgtcttgggccgacgtcgtttgaccgaggggattagttctgagcagctggaggcgtcgatggtggctttaggccgaaacaaacccgactcgggctgtgatggcgcaggtctccagcgatctatgacggctgcaggagagccgagccgggcggctcaccgttttccctctctcaaaatccccggactctccctccgatacctcacacagctcacaacaatggcgaacaccacctccaccgccagcaacgaaatcttaatgttagaagctccgccgcaaggtccatcgtggccgggccccttaaccaacgccgagatcatcgacgccttgccgtacatcgacgaagactactacgccagcgcagccgtcaagagagaggtcgacctcatggtggaggaagagctccgtcgcagcgccaaaaagcccgccgatttcctcaaagacttgcctccactcgccaagcccaatttcaagaataatccagttctggcgagagagtacgaccgcgtgagagcttccaagcctcccgtggttcttgatttctccagagataaagcggagatgccgaagaggactgatgaagctgcttggagacaggctcttcagaaagctcagtgcttttcgcagcacaatgtcgtcagattggagaatttggagcttatggataagtatggccctgacgcctggattcagtacaacaatgtattgcaatcgcttttgtcgagattgcagaaattaactcatgaacgctctcaaatgattggaactgtgaatcgtgaaaggaaagaacatcagcaaaacactgcatatgagcttaatgctttatctgcgcaatggaaggaactttctctgaaaaacatagaaattcaagccgcatgtgctaaaatagaaaattatatagatgaactcaaaaaggaagctgcagagagaggctgggacttaaaaccagtggagaatggcccgttgaattctgaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000974 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005730 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009870 GO:0009987 GO:0010204 GO:0023052 GO:0031347 GO:0031349 GO:0031974 GO:0031981 GO:0032991 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070013 GO:0071011 GO:0071013 GO:0080134 GO:0098542 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

BCAS2

Protein Analysis

781

Amino Acids

86.71

Weight (kDa)

9.5

Isoelectric Point (pI)

48.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18165
fragaria_vesca	FvH4_5g17030 FvH4_5g17030 FvH4_5g17030 FvH4_5g17030
malus_domestica	MD00G1160500.v1.1 MD14G1233600.v1.1
prunus_persica	Prupe.5G229800_v2.0.a1
pyrus_communis	pycom14g19460
rosa_chinensis	RchiOBHm_Chr7g0178821
rosa_laevigata	RLG00000005412 RLG00000032628
rosa_multiflora	Rmu_co8249681.1_g000001 Rmu_sc0015029.1_g000006 Rmu_sc0025325.1_g000005
rosa_roxburghii	Rroxscaffold_3G00274550
rosa_rugosa	Rorug06G0420000 Rorug06G0420100
rosa_samantha	Rh1BG107100 Rh7AG019300 Rh7BG018800 Rh7CG019400 Rh7DG019200
rosa_wichuraiana	Rw7G001570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1051
AatII	GACGTC	2 cut(s)	877, 1387
Acc16I	TGCGCA	2 cut(s)	434, 2199
Acc36I	ACCTGC	4 cut(s)	487, 1051, 1136, 1466
AccB1I	GGYRCC	1 cut(s)	1166
AccI	GTMKAC	3 cut(s)	100, 1078, 1749
AccII	CGCG	2 cut(s)	270, 1875
AclWI	GGATC	5 cut(s)	81, 251, 264, 347, 573
AcoI	YGGCCR	1 cut(s)	1658
AcsI	RAATTY	3 cut(s)	2017, 2232, 2335
AcuI	CTGAAG	2 cut(s)	482, 1955
AcyI	GRCGYC	7 cut(s)	35, 833, 874, 1384, 1424, 1692, 2049
AfaI	GTAC	5 cut(s)	498, 1114, 1703, 1868, 2063
AgeI	ACCGGT	1 cut(s)	1246
AgsI	TTSAA	7 cut(s)	304, 422, 796, 899, 1840, 2237, 2335
AhdI	GACNNNNNGTC	1 cut(s)	878
AjnI	CCWGG	2 cut(s)	1303, 2051
AjuI	GAANNNNNNNTTGG	4 cut(s)	666, 698, 1820, 1852
AloI	GAACNNNNNNTCC	2 cut(s)	1586, 1618
Alw21I	GWGCWC	3 cut(s)	659, 1296, 1773
Alw26I	GTCTC	4 cut(s)	554, 972, 1484, 1954
Alw44I	GTGCAC	1 cut(s)	1292
AlwI	GGATC	5 cut(s)	81, 251, 264, 347, 573
Ama87I	CYCGRG	1 cut(s)	1459
ApaI	GGGCCC	1 cut(s)	1667
ApaLI	GTGCAC	1 cut(s)	1292
ApoI	RAATTY	3 cut(s)	2017, 2232, 2335
ArsI	GACNNNNNNTTYG	2 cut(s)	590, 622
AsiGI	ACCGGT	1 cut(s)	1246
AspLEI	GCGC	6 cut(s)	272, 435, 1475, 1730, 1784, 2200
AsuC2I	CCSGG	4 cut(s)	665, 1517, 1551, 1662
AsuHPI	GGTGA	7 cut(s)	467, 595, 679, 874, 1261, 1294, 1517
AvaI	CYCGRG	1 cut(s)	1459
AvaII	GGWCC	5 cut(s)	232, 265, 472, 779, 1649
AxyI	CCTNAGG	1 cut(s)	1224
BaeGI	GKGCMC	2 cut(s)	1296, 1667
BamHI	GGATCC	1 cut(s)	256
BanI	GGYRCC	1 cut(s)	1166
BanII	GRGCYC	2 cut(s)	1667, 1773
BauI	CACGAG	1 cut(s)	1289
BbsI	GAAGAC	2 cut(s)	784, 1719
Bbv12I	GWGCWC	3 cut(s)	659, 1296, 1773
BccI	CCATC	9 cut(s)	91, 329, 664, 671, 893, 1267, 1423, 1463, 1660
BceAI	ACGGC	4 cut(s)	156, 1512, 1684, 1718
BciT130I	CCWGG	2 cut(s)	1305, 2053
BcnI	CCSGG	4 cut(s)	665, 1517, 1551, 1662
BcoDI	GTCTC	4 cut(s)	554, 972, 1484, 1954
BfaI	CTAG	3 cut(s)	308, 323, 699
BfmI	CTRYAG	4 cut(s)	315, 843, 1500, 2289
BfoI	RGCGCY	1 cut(s)	1785
BfuAI	ACCTGC	4 cut(s)	487, 1051, 1136, 1466
BglI	GCCNNNNNGGC	1 cut(s)	32
BglII	AGATCT	1 cut(s)	205
Bme1390I	CCNGG	6 cut(s)	665, 1305, 1517, 1551, 1662, 2053
Bme18I	GGWCC	5 cut(s)	232, 265, 472, 779, 1649
BmeRI	GACNNNNNGTC	1 cut(s)	878
BmeT110I	CYCGRG	1 cut(s)	1459
BmiI	GGNNCC	9 cut(s)	158, 219, 233, 258, 473, 590, 1168, 1665, 1666
BmrFI	CCNGG	6 cut(s)	665, 1305, 1517, 1551, 1662, 2053
BmsI	GCATC	7 cut(s)	420, 605, 761, 926, 1006, 1092, 1920
BpiI	GAAGAC	2 cut(s)	784, 1719
BplI	GAGNNNNNCTC	2 cut(s)	1951, 1983
BpmI	CTGGAG	4 cut(s)	1282, 1439, 1466, 1897
BpuMI	CCSGG	4 cut(s)	665, 1517, 1551, 1662
BsaHI	GRCGYC	7 cut(s)	35, 833, 874, 1384, 1424, 1692, 2049
BsaI	GGTCTC	1 cut(s)	1484
BsaJI	CCNNGG	7 cut(s)	87, 828, 980, 1170, 1395, 1549, 1896
BsaWI	WCCGGW	4 cut(s)	109, 259, 703, 1246
BsaXI	ACNNNNNCTCC	8 cut(s)	506, 536, 1330, 1360, 1545, 1575, 1586, 1616
Bse118I	RCCGGY	3 cut(s)	220, 406, 1246
Bse1I	ACTGG	6 cut(s)	54, 347, 1090, 1213, 1850, 2315
Bse21I	CCTNAGG	1 cut(s)	1224
Bse3DI	GCAATG	1 cut(s)	2207
BseBI	CCWGG	2 cut(s)	1305, 2053
BseDI	CCNNGG	7 cut(s)	87, 828, 980, 1170, 1395, 1549, 1896
BseGI	GGATG	4 cut(s)	83, 180, 403, 885
BseMI	GCAATG	1 cut(s)	2207
BseMII	CTCAG	7 cut(s)	68, 875, 950, 977, 1131, 1401, 1994
BseNI	ACTGG	6 cut(s)	54, 347, 1090, 1213, 1850, 2315
BseSI	GKGCMC	2 cut(s)	1296, 1667
BseYI	CCCAGC	1 cut(s)	2301
Bsh1236I	CGCG	2 cut(s)	270, 1875
Bsh1285I	CGRYCG	1 cut(s)	1873
BshNI	GGYRCC	1 cut(s)	1166
BshTI	ACCGGT	1 cut(s)	1246
BsiEI	CGRYCG	1 cut(s)	1873
BsiHKAI	GWGCWC	3 cut(s)	659, 1296, 1773
BsiHKCI	CYCGRG	1 cut(s)	1459
BslFI	GGGAC	5 cut(s)	245, 485, 946, 1208, 2318
BsmAI	GTCTC	4 cut(s)	554, 972, 1484, 1954
BsmBI	CGTCTC	1 cut(s)	554
BsmFI	GGGAC	5 cut(s)	245, 485, 946, 1208, 2318
Bso31I	GGTCTC	1 cut(s)	1484
BsoBI	CYCGRG	1 cut(s)	1459
Bsp120I	GGGCCC	1 cut(s)	1663
Bsp1286I	GDGCHC	4 cut(s)	659, 1296, 1667, 1773
BspCNI	CTCAG	7 cut(s)	69, 874, 949, 978, 1132, 1402, 1993
BspFNI	CGCG	2 cut(s)	270, 1875
BspHI	TCATGA	1 cut(s)	2110
BspLI	GGNNCC	9 cut(s)	158, 219, 233, 258, 473, 590, 1168, 1665, 1666
BspMAI	CTGCAG	3 cut(s)	847, 1504, 2293
BspMI	ACCTGC	4 cut(s)	487, 1051, 1136, 1466
BspPI	GGATC	5 cut(s)	81, 251, 264, 347, 573
BspQI	GCTCTTC	3 cut(s)	379, 1761, 1974
BspT107I	GGYRCC	1 cut(s)	1166
BspTNI	GGTCTC	1 cut(s)	1484
BsrDI	GCAATG	1 cut(s)	2207
BsrFI	RCCGGY	3 cut(s)	220, 406, 1246
BsrI	ACTGG	6 cut(s)	54, 347, 1090, 1213, 1850, 2315
BssAI	RCCGGY	3 cut(s)	220, 406, 1246
BssECI	CCNNGG	7 cut(s)	87, 828, 980, 1170, 1395, 1549, 1896
BssNI	GRCGYC	7 cut(s)	35, 833, 874, 1384, 1424, 1692, 2049
BssSI	CACGAG	1 cut(s)	1289
BssT1I	CCWWGG	4 cut(s)	87, 828, 980, 1170
Bst2BI	CACGAG	1 cut(s)	1289
Bst2UI	CCWGG	2 cut(s)	1305, 2053
Bst4CI	ACNGT	4 cut(s)	161, 654, 1529, 2137
Bst6I	CTCTTC	4 cut(s)	379, 1761, 1931, 1974
BstACI	GRCGYC	7 cut(s)	35, 833, 874, 1384, 1424, 1692, 2049
BstC8I	GCNNGC	7 cut(s)	222, 408, 847, 915, 1612, 1726, 1794
BstDEI	CTNAG	8 cut(s)	77, 861, 936, 986, 1140, 1224, 1410, 1980
BstDSI	CCRYGG	1 cut(s)	1896
BstEII	GGTNACC	1 cut(s)	648
BstF5I	GGATG	4 cut(s)	83, 180, 403, 885
BstFNI	CGCG	2 cut(s)	270, 1875
BstH2I	RGCGCY	1 cut(s)	1785
BstHHI	GCGC	6 cut(s)	272, 435, 1475, 1730, 1784, 2200
BstMAI	GTCTC	4 cut(s)	554, 972, 1484, 1954
BstMCI	CGRYCG	1 cut(s)	1873
BstNI	CCWGG	2 cut(s)	1305, 2053
BstNSI	RCATGY	3 cut(s)	197, 917, 2247
BstPI	GGTNACC	1 cut(s)	648
BstSCI	CCNGG	6 cut(s)	663, 1303, 1515, 1549, 1660, 2051
BstSFI	CTRYAG	4 cut(s)	315, 843, 1500, 2289
BstSLI	GKGCMC	2 cut(s)	1296, 1667
BstUI	CGCG	2 cut(s)	270, 1875
BstV2I	GAAGAC	2 cut(s)	784, 1719
BstX2I	RGATCY	3 cut(s)	73, 205, 256
BstYI	RGATCY	3 cut(s)	73, 205, 256
Bsu36I	CCTNAGG	1 cut(s)	1224
BtgI	CCRYGG	1 cut(s)	1896
BtsCI	GGATG	4 cut(s)	83, 180, 403, 885
BtsI	GCAGTG	2 cut(s)	75, 2169
BtsIMutI	CAGTG	5 cut(s)	47, 75, 1988, 2169, 2322
BveI	ACCTGC	4 cut(s)	487, 1051, 1136, 1466
Cac8I	GCNNGC	7 cut(s)	222, 408, 847, 915, 1612, 1726, 1794
CciI	TCATGA	1 cut(s)	2110
CfoI	GCGC	6 cut(s)	272, 435, 1475, 1730, 1784, 2200
Cfr10I	RCCGGY	3 cut(s)	220, 406, 1246
CseI	GACGC	7 cut(s)	23, 24, 822, 1360, 1413, 1700, 2057
Csp6I	GTAC	5 cut(s)	497, 1113, 1702, 1867, 2062
CspAI	ACCGGT	1 cut(s)	1246
CspCI	CAANNNNNGTGG	2 cut(s)	607, 642
CviQI	GTAC	5 cut(s)	497, 1113, 1702, 1867, 2062
DdeI	CTNAG	8 cut(s)	77, 861, 936, 986, 1140, 1224, 1410, 1980
DriI	GACNNNNNGTC	1 cut(s)	878
EaeI	YGGCCR	1 cut(s)	1658
Eam1104I	CTCTTC	4 cut(s)	379, 1761, 1931, 1974
Eam1105I	GACNNNNNGTC	1 cut(s)	878
EarI	CTCTTC	4 cut(s)	379, 1761, 1931, 1974
EciI	GGCGGA	2 cut(s)	68, 1629
Ecl136II	GAGCTC	1 cut(s)	1771
Eco130I	CCWWGG	4 cut(s)	87, 828, 980, 1170
Eco147I	AGGCCT	2 cut(s)	697, 868
Eco24I	GRGCYC	2 cut(s)	1667, 1773
Eco31I	GGTCTC	1 cut(s)	1484
Eco47I	GGWCC	5 cut(s)	232, 265, 472, 779, 1649
Eco53kI	GAGCTC	1 cut(s)	1771
Eco57I	CTGAAG	2 cut(s)	482, 1955
Eco81I	CCTNAGG	1 cut(s)	1224
Eco88I	CYCGRG	1 cut(s)	1459
Eco91I	GGTNACC	1 cut(s)	648
EcoICRI	GAGCTC	1 cut(s)	1771
EcoO109I	RGGNCCY	1 cut(s)	1664
EcoO65I	GGTNACC	1 cut(s)	648
EcoRI	GAATTC	1 cut(s)	2335
EcoRII	CCWGG	2 cut(s)	1303, 2051
EcoT14I	CCWWGG	4 cut(s)	87, 828, 980, 1170
EcoT22I	ATGCAT	1 cut(s)	919
EcoT38I	GRGCYC	2 cut(s)	1667, 1773
ErhI	CCWWGG	4 cut(s)	87, 828, 980, 1170
Esp3I	CGTCTC	1 cut(s)	554
FaqI	GGGAC	5 cut(s)	245, 485, 946, 1208, 2318
FauI	CCCGC	3 cut(s)	204, 495, 1801
FauNDI	CATATG	4 cut(s)	331, 952, 1108, 2176
FblI	GTMKAC	3 cut(s)	100, 1078, 1749
FokI	GGATG	4 cut(s)	70, 187, 410, 872
FriOI	GRGCYC	2 cut(s)	1667, 1773
FspAI	RTGCGCAY	1 cut(s)	434
FspBI	CTAG	3 cut(s)	308, 323, 699
FspI	TGCGCA	2 cut(s)	434, 2199
GlaI	GCGC	6 cut(s)	271, 434, 1474, 1729, 1783, 2199
GsaI	CCCAGC	1 cut(s)	2305
GsuI	CTGGAG	4 cut(s)	1282, 1439, 1466, 1897
HaeII	RGCGCY	1 cut(s)	1785
HgaI	GACGC	7 cut(s)	23, 24, 822, 1360, 1413, 1700, 2057
HhaI	GCGC	6 cut(s)	272, 435, 1475, 1730, 1784, 2200
Hin1I	GRCGYC	7 cut(s)	35, 833, 874, 1384, 1424, 1692, 2049
Hin6I	GCGC	6 cut(s)	270, 433, 1473, 1728, 1782, 2198
HinP1I	GCGC	6 cut(s)	270, 433, 1473, 1728, 1782, 2198
HincII	GTYRAC	2 cut(s)	1079, 1750
HindII	GTYRAC	2 cut(s)	1079, 1750
HinfI	GANTC	6 cut(s)	934, 1214, 1457, 1554, 2056, 2140
HphI	GGTGA	7 cut(s)	467, 595, 679, 874, 1261, 1294, 1517
Hpy166II	GTNNAC	7 cut(s)	101, 265, 497, 779, 1079, 1294, 1750
Hpy188III	TCNNGA	9 cut(s)	1270, 1299, 1738, 1840, 1904, 1914, 2091, 2111, 2144
Hpy8I	GTNNAC	7 cut(s)	101, 265, 497, 779, 1079, 1294, 1750
Hpy99I	CGWCG	8 cut(s)	40, 876, 1386, 1389, 1429, 1694, 1712, 1779
HpyAV	CCTTC	6 cut(s)	457, 819, 866, 1156, 1225, 2200
HpyCH4III	ACNGT	4 cut(s)	161, 654, 1529, 2137
HpyCH4IV	ACGT	3 cut(s)	547, 874, 1384
HpyF3I	CTNAG	8 cut(s)	77, 861, 936, 986, 1140, 1224, 1410, 1980
HpySE526I	ACGT	3 cut(s)	547, 874, 1384
Hsp92I	GRCGYC	7 cut(s)	35, 833, 874, 1384, 1424, 1692, 2049
HspAI	GCGC	6 cut(s)	270, 433, 1473, 1728, 1782, 2198
KroI	GCCGGC	2 cut(s)	220, 406
KroNI	GCCGGC	2 cut(s)	222, 408
LguI	GCTCTTC	3 cut(s)	379, 1761, 1974
LmnI	GCTCC	5 cut(s)	217, 709, 1642, 1776, 2023
LweI	GCATC	7 cut(s)	420, 605, 761, 926, 1006, 1092, 1920
MaeI	CTAG	3 cut(s)	308, 323, 699
MaeII	ACGT	3 cut(s)	547, 874, 1384
MaeIII	GTNAC	4 cut(s)	132, 634, 648, 880
MfeI	CAATTG	1 cut(s)	996
MflI	RGATCY	3 cut(s)	73, 205, 256
MhlI	GDGCHC	4 cut(s)	659, 1296, 1667, 1773
MlyI	GAGTC	4 cut(s)	928, 1208, 1451, 1548
MmeI	TCCRAC	4 cut(s)	375, 540, 664, 1242
Mph1103I	ATGCAT	1 cut(s)	919
MreI	CGCCGGCG	1 cut(s)	406
MroNI	GCCGGC	2 cut(s)	220, 406
MseI	TTAA	8 cut(s)	1034, 1095, 1187, 1625, 1670, 2105, 2184, 2309
MslI	CAYNNNNRTG	2 cut(s)	198, 1586
MspA1I	CMGCKG	2 cut(s)	624, 1417
MspR9I	CCNGG	6 cut(s)	665, 1305, 1517, 1551, 1662, 2053
MunI	CAATTG	1 cut(s)	996
MvaI	CCWGG	2 cut(s)	1305, 2053
MvnI	CGCG	2 cut(s)	270, 1875
NaeI	GCCGGC	2 cut(s)	222, 408
NciI	CCSGG	4 cut(s)	665, 1517, 1551, 1662
NdeI	CATATG	4 cut(s)	331, 952, 1108, 2176
NgoMIV	GCCGGC	2 cut(s)	220, 406
NlaIV	GGNNCC	9 cut(s)	158, 219, 233, 258, 473, 590, 1168, 1665, 1666
NmeAIII	GCCGAG	2 cut(s)	1536, 1705
NmuCI	GTSAC	1 cut(s)	880
NsbI	TGCGCA	2 cut(s)	434, 2199
NsiI	ATGCAT	1 cut(s)	919
NspI	RCATGY	3 cut(s)	197, 917, 2247
PaeI	GCATGC	1 cut(s)	917
PagI	TCATGA	1 cut(s)	2110
PaqCI	CACCTGC	1 cut(s)	1051
PceI	AGGCCT	2 cut(s)	697, 868
PciSI	GCTCTTC	3 cut(s)	379, 1761, 1974
PcsI	WCGNNNNNNNCGW	3 cut(s)	348, 968, 2087
PdiI	GCCGGC	2 cut(s)	222, 408
PfeI	GAWTC	2 cut(s)	2056, 2140
PinAI	ACCGGT	1 cut(s)	1246
PleI	GAGTC	4 cut(s)	928, 1208, 1451, 1548
PpsI	GAGTC	4 cut(s)	928, 1208, 1451, 1548
Psp124BI	GAGCTC	1 cut(s)	1773
Psp6I	CCWGG	2 cut(s)	1303, 2051
PspEI	GGTNACC	1 cut(s)	648
PspFI	CCCAGC	1 cut(s)	2301
PspGI	CCWGG	2 cut(s)	1303, 2051
PspN4I	GGNNCC	9 cut(s)	158, 219, 233, 258, 473, 590, 1168, 1665, 1666
PspOMI	GGGCCC	1 cut(s)	1663
PstI	CTGCAG	3 cut(s)	847, 1504, 2293
PsuI	RGATCY	3 cut(s)	73, 205, 256
PvuII	CAGCTG	2 cut(s)	624, 1417
RsaI	GTAC	5 cut(s)	498, 1114, 1703, 1868, 2063
RsaNI	GTAC	5 cut(s)	497, 1113, 1702, 1867, 2062
RseI	CAYNNNNRTG	2 cut(s)	198, 1586
SacI	GAGCTC	1 cut(s)	1773
SalI	GTCGAC	2 cut(s)	1077, 1748
SapI	GCTCTTC	3 cut(s)	379, 1761, 1974
SaqAI	TTAA	8 cut(s)	1034, 1095, 1187, 1625, 1670, 2105, 2184, 2309
SchI	GAGTC	4 cut(s)	928, 1208, 1451, 1548
ScrFI	CCNGG	6 cut(s)	665, 1305, 1517, 1551, 1662, 2053
SduI	GDGCHC	4 cut(s)	659, 1296, 1667, 1773
SfaNI	GCATC	7 cut(s)	420, 605, 761, 926, 1006, 1092, 1920
SfcI	CTRYAG	4 cut(s)	315, 843, 1500, 2289
SgrAI	CRCCGGYG	1 cut(s)	406
SinI	GGWCC	5 cut(s)	232, 265, 472, 779, 1649
SmiMI	CAYNNNNRTG	2 cut(s)	198, 1586
SphI	GCATGC	1 cut(s)	917
SseBI	AGGCCT	2 cut(s)	697, 868
SspI	AATATT	2 cut(s)	606, 1012
SspMI	CTAG	3 cut(s)	308, 323, 699
SstI	GAGCTC	1 cut(s)	1773
StuI	AGGCCT	2 cut(s)	697, 868
StyD4I	CCNGG	6 cut(s)	663, 1303, 1515, 1549, 1660, 2051
StyI	CCWWGG	4 cut(s)	87, 828, 980, 1170
TaaI	ACNGT	4 cut(s)	161, 654, 1529, 2137
TaiI	ACGT	3 cut(s)	550, 877, 1387
TaqII	GACCGA	2 cut(s)	489, 1409
TatI	WGTACW	2 cut(s)	496, 2061
TauI	GCSGC	6 cut(s)	406, 1280, 1328, 1523, 1645, 2243
TfiI	GAWTC	2 cut(s)	2056, 2140
Tru1I	TTAA	8 cut(s)	1034, 1095, 1187, 1625, 1670, 2105, 2184, 2309
Tru9I	TTAA	8 cut(s)	1034, 1095, 1187, 1625, 1670, 2105, 2184, 2309
TscAI	CASTG	5 cut(s)	54, 75, 1988, 2176, 2322
TseFI	GTSAC	1 cut(s)	880
Tsp45I	GTSAC	1 cut(s)	880
TspDTI	ATGAA	3 cut(s)	1962, 2127, 2286
TspGWI	ACGGA	2 cut(s)	581, 1763
TspRI	CASTG	5 cut(s)	54, 75, 1988, 2176, 2322
VneI	GTGCAC	1 cut(s)	1292
VpaK11BI	GGWCC	5 cut(s)	232, 265, 472, 779, 1649
XapI	RAATTY	3 cut(s)	2017, 2232, 2335
XceI	RCATGY	3 cut(s)	197, 917, 2247
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1894
XmiI	GTMKAC	3 cut(s)	100, 1078, 1749
XspI	CTAG	3 cut(s)	308, 323, 699
ZraI	GACGTC	2 cut(s)	875, 1385
Zsp2I	ATGCAT	1 cut(s)	919

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.