Transcription termination and cleavage factor C-terminal
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G73840 AT1G73840 |
| fragaria_vesca | FvH4_5g12080 FvH4_5g12080 FvH4_5g12080 FvH4_5g12080 |
| malus_domestica | MD14G1227000.v1.1 |
| prunus_persica | Prupe.5G221700_v2.0.a1 |
| pyrus_communis | pycom14g18840 |
| rosa_chinensis | RchiOBHm_Chr7g0185491 |
| rosa_laevigata | RLG00000004908 |
| rosa_multiflora | Rmu_sc0010190.1_g000021 Rmu_sc0032992.1_g000001 Rmu_sc0042045.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00268890 |
| rosa_rugosa | Rorug06G0469800 |
| rosa_samantha | Rh7AG073000 Rh7BG074600 Rh7CG074700 Rh7DG074600 |
| rosa_wichuraiana | Rw7G006210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 167 |
| AclWI | GGATC | 1 cut(s) | 67 |
| AfaI | GTAC | 1 cut(s) | 20 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 158 |
| AjnI | CCWGG | 3 cut(s) | 127, 139, 151 |
| AluBI | AGCT | 1 cut(s) | 103 |
| AluI | AGCT | 1 cut(s) | 103 |
| AlwI | GGATC | 1 cut(s) | 67 |
| AoxI | GGCC | 1 cut(s) | 73 |
| ApeKI | GCWGC | 1 cut(s) | 144 |
| AspS9I | GGNCC | 2 cut(s) | 74, 110 |
| AvaII | GGWCC | 1 cut(s) | 110 |
| BbvI | GCAGC | 1 cut(s) | 156 |
| BccI | CCATC | 1 cut(s) | 124 |
| BciT130I | CCWGG | 3 cut(s) | 129, 141, 153 |
| BisI | GCNGC | 1 cut(s) | 145 |
| BlsI | GCNGC | 1 cut(s) | 146 |
| Bme1390I | CCNGG | 3 cut(s) | 129, 141, 153 |
| Bme18I | GGWCC | 1 cut(s) | 110 |
| BmgT120I | GGNCC | 2 cut(s) | 74, 110 |
| BmrFI | CCNGG | 3 cut(s) | 129, 141, 153 |
| BpmI | CTGGAG | 1 cut(s) | 63 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 158 |
| BseBI | CCWGG | 3 cut(s) | 129, 141, 153 |
| BseGI | GGATG | 1 cut(s) | 72 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 158 |
| BseXI | GCAGC | 1 cut(s) | 156 |
| BshFI | GGCC | 1 cut(s) | 75 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 158 |
| BsnI | GGCC | 1 cut(s) | 75 |
| Bsp143I | GATC | 1 cut(s) | 59 |
| BspACI | CCGC | 1 cut(s) | 167 |
| BspANI | GGCC | 1 cut(s) | 75 |
| BspPI | GGATC | 1 cut(s) | 67 |
| BssMI | GATC | 1 cut(s) | 59 |
| Bst2UI | CCWGG | 3 cut(s) | 129, 141, 153 |
| BstC8I | GCNNGC | 2 cut(s) | 48, 149 |
| BstF5I | GGATG | 1 cut(s) | 72 |
| BstKTI | GATC | 1 cut(s) | 62 |
| BstMBI | GATC | 1 cut(s) | 59 |
| BstNI | CCWGG | 3 cut(s) | 129, 141, 153 |
| BstSCI | CCNGG | 3 cut(s) | 127, 139, 151 |
| BstV1I | GCAGC | 1 cut(s) | 156 |
| BstX2I | RGATCY | 1 cut(s) | 59 |
| BstYI | RGATCY | 1 cut(s) | 59 |
| BsuRI | GGCC | 1 cut(s) | 75 |
| BtsCI | GGATG | 1 cut(s) | 72 |
| BtsIMutI | CAGTG | 1 cut(s) | 99 |
| Cac8I | GCNNGC | 2 cut(s) | 48, 149 |
| Cfr13I | GGNCC | 2 cut(s) | 74, 110 |
| Csp6I | GTAC | 1 cut(s) | 19 |
| CviJI | RGCY | 4 cut(s) | 75, 103, 147, 151 |
| CviKI_1 | RGCY | 4 cut(s) | 75, 103, 147, 151 |
| CviQI | GTAC | 1 cut(s) | 19 |
| DpnI | GATC | 1 cut(s) | 61 |
| DpnII | GATC | 1 cut(s) | 59 |
| Eco47I | GGWCC | 1 cut(s) | 110 |
| EcoRII | CCWGG | 3 cut(s) | 127, 139, 151 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaiI | YATR | 1 cut(s) | 44 |
| Fnu4HI | GCNGC | 1 cut(s) | 145 |
| FokI | GGATG | 1 cut(s) | 79 |
| Fsp4HI | GCNGC | 1 cut(s) | 145 |
| GluI | GCNGC | 1 cut(s) | 145 |
| GsuI | CTGGAG | 1 cut(s) | 63 |
| HaeIII | GGCC | 1 cut(s) | 75 |
| Hpy188I | TCNGA | 1 cut(s) | 16 |
| Hpy188III | TCNNGA | 2 cut(s) | 80, 108 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 46 |
| Kzo9I | GATC | 1 cut(s) | 59 |
| Lsp1109I | GCAGC | 1 cut(s) | 156 |
| MalI | GATC | 1 cut(s) | 61 |
| MboI | GATC | 1 cut(s) | 59 |
| MflI | RGATCY | 1 cut(s) | 59 |
| MmeI | TCCRAC | 1 cut(s) | 13 |
| MnlI | CCTC | 2 cut(s) | 50, 87 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MspA1I | CMGCKG | 1 cut(s) | 167 |
| MspR9I | CCNGG | 3 cut(s) | 129, 141, 153 |
| MvaI | CCWGG | 3 cut(s) | 129, 141, 153 |
| NdeII | GATC | 1 cut(s) | 59 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PkrI | GCNGC | 1 cut(s) | 146 |
| Psp6I | CCWGG | 3 cut(s) | 127, 139, 151 |
| PspGI | CCWGG | 3 cut(s) | 127, 139, 151 |
| PspPI | GGNCC | 2 cut(s) | 74, 110 |
| PsuI | RGATCY | 1 cut(s) | 59 |
| RsaI | GTAC | 1 cut(s) | 20 |
| RsaNI | GTAC | 1 cut(s) | 19 |
| SatI | GCNGC | 1 cut(s) | 145 |
| Sau3AI | GATC | 1 cut(s) | 59 |
| Sau96I | GGNCC | 2 cut(s) | 74, 110 |
| ScrFI | CCNGG | 3 cut(s) | 129, 141, 153 |
| SetI | ASST | 1 cut(s) | 105 |
| SinI | GGWCC | 1 cut(s) | 110 |
| SsiI | CCGC | 1 cut(s) | 167 |
| StyD4I | CCNGG | 3 cut(s) | 127, 139, 151 |
| TatI | WGTACW | 1 cut(s) | 18 |
| TscAI | CASTG | 1 cut(s) | 99 |
| TseI | GCWGC | 1 cut(s) | 144 |
| TspDTI | ATGAA | 1 cut(s) | 78 |
| TspRI | CASTG | 1 cut(s) | 99 |
| VpaK11BI | GGWCC | 1 cut(s) | 110 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 155 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |