Rmu_ssc0000196.1_g000001

Equilibrative nucleotide transporter 3-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000196.1
Physical Location & Seq
Reverse (-)
3393 .. 6975
3583 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000196.1_g000001.1.cds

Sequence Viewer

Length: 1164 bp
ctggagggcgccgaggcatttggtgcagccagcgtaggaagagttgcggcagttcttttcgagattcttgaccgcggcggttggggtggcgttgtggaacccgtagacgttgaacgccgccgtacagctgagggagctgatctggtggagcctgatcccaagaagcagagtatggcgtcacacgtggcgttcgactgtgggatccggatgtttcggctgaggagcgaggtctggagagagttcacgcacttctgcgcgtcgtccggcatcatcggaaggtcgccccaggcggaagggtcaggagcggaggagatttccagagctgacctcacggctctgcgcaatacattcatgaattctttccttgctggcttggctgcatcaggggccctaacctctggactgaggctacttacaaaggcaatatttgagaattcccagaatggtctgcgcaagggagccattatgttcttttccatctctacattctttgagctgctatgtgtttttctgtacgctgttgtctttccgaagctaccaattgtgaagttctaccgctccaaggcagcatcagaaggaccaaaaactgtttcggctgaccttgctgctggtggcatccagacattaccggaaggagatgcagaggatccgactaagatgcagcggctggggaacaaacaattgttagctcaaaacgttgattacgcaattgatatgtttctaatctatgtgctgaccttgtcaattttccccggattcctatcagaagatacgggatctcacagtttgggtacatggtatccactggttttgattgcaatgtacaatgtgtgggatctcatagggagatacgttccatgcttagattgcctcaagttagaatcacgtaaatggctgatggttgtaattgttgctcgtttcttacttgttcctgcgttctatttcactgccaagtacggagaccaaggctggatgatcatgcttacatccttcttgggtttaacccatggttacttaactgtttgtgtgctcactagagcacctaaaggctacaagggaccggaacaaaatgctttgggaaatctactggtagtgttcttattattaggtatatttgcaggagtaacactcgactggttgtggcttataggcaagggctggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

387

Amino Acids

42.49

Weight (kDa)

7.06

Isoelectric Point (pI)

36.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 341, 452
AccB1I GGYRCC 1 cut(s) 8
AccBSI CCGCTC 2 cut(s) 305, 558
AccI GTMKAC 1 cut(s) 105
AccII CGCG 2 cut(s) 75, 257
AccIII TCCGGA 1 cut(s) 204
AciI CCGC 9 cut(s) 47, 73, 75, 78, 118, 290, 305, 556, 664
AclI AACGTT 1 cut(s) 696
AclWI GGATC 7 cut(s) 149, 196, 209, 641, 654, 784, 843
AcsI RAATTY 2 cut(s) 355, 433
AcvI CACGTG 1 cut(s) 184
AcyI GRCGYC 2 cut(s) 9, 176
AfaI GTAC 5 cut(s) 124, 515, 793, 824, 956
AfiI CCNNNNNNNGG 1 cut(s) 562
AflIII ACRYGT 1 cut(s) 181
AgsI TTSAA 1 cut(s) 113
AjnI CCWGG 1 cut(s) 285
AjuI GAANNNNNNNTTGG 2 cut(s) 574, 606
AluBI AGCT 6 cut(s) 128, 137, 323, 496, 535, 689
AluI AGCT 6 cut(s) 128, 137, 323, 496, 535, 689
Alw21I GWGCWC 2 cut(s) 1032, 1042
Alw26I GTCTC 1 cut(s) 954
AlwI GGATC 7 cut(s) 149, 196, 209, 641, 654, 784, 843
AlwNI CAGNNNCTG 1 cut(s) 667
Aor13HI TCCGGA 1 cut(s) 204
AoxI GGCC 1 cut(s) 387
ApaI GGGCCC 1 cut(s) 391
ApeKI GCWGC 6 cut(s) 26, 377, 496, 566, 605, 661
ApoI RAATTY 2 cut(s) 355, 433
Asp700I GAANNNNTTC 1 cut(s) 359
AspLEI GCGC 4 cut(s) 11, 257, 342, 453
AspS9I GGNCC 4 cut(s) 387, 388, 578, 1058
AsuC2I CCSGG 1 cut(s) 753
AvaII GGWCC 2 cut(s) 578, 1058
BaeGI GKGCMC 1 cut(s) 391
BamHI GGATCC 2 cut(s) 201, 646
BanI GGYRCC 1 cut(s) 8
BanII GRGCYC 1 cut(s) 391
BbrPI CACGTG 1 cut(s) 184
Bbv12I GWGCWC 2 cut(s) 1032, 1042
BbvCI CCTCAGC 2 cut(s) 129, 218
BbvI GCAGC 6 cut(s) 38, 364, 483, 578, 592, 673
BccI CCATC 2 cut(s) 485, 892
BceAI ACGGC 2 cut(s) 105, 348
BcgI CGANNNNNNTGC 2 cut(s) 640, 674
BciT130I CCWGG 1 cut(s) 287
BciVI GTATCC 1 cut(s) 810
BclI TGATCA 1 cut(s) 975
BcnI CCSGG 1 cut(s) 753
BcoDI GTCTC 1 cut(s) 954
BfaI CTAG 1 cut(s) 1035
BfoI RGCGCY 1 cut(s) 12
BfuI GTATCC 1 cut(s) 810
Bme1390I CCNGG 2 cut(s) 287, 753
Bme18I GGWCC 2 cut(s) 578, 1058
BmgT120I GGNCC 4 cut(s) 387, 388, 578, 1058
BmiI GGNNCC 9 cut(s) 10, 99, 150, 203, 388, 389, 460, 648, 1059
BmrFI CCNGG 2 cut(s) 287, 753
BmsI GCATC 6 cut(s) 276, 389, 578, 624, 628, 648
BplI GAGNNNNNCTC 4 cut(s) 312, 344, 1113, 1145
BpmI CTGGAG 2 cut(s) 23, 253
Bpu10I CCTNAGC 2 cut(s) 129, 218
BpuEI CTTGAG 1 cut(s) 857
BpuMI CCSGG 1 cut(s) 753
BsaAI YACGTR 2 cut(s) 184, 887
BsaBI GATNNNNATC 1 cut(s) 760
BsaHI GRCGYC 2 cut(s) 9, 176
BsaI GGTCTC 1 cut(s) 954
BsaJI CCNNGG 7 cut(s) 12, 73, 285, 561, 751, 964, 1006
BsaWI WCCGGW 3 cut(s) 204, 628, 1060
Bsc4I CCNNNNNNNGG 1 cut(s) 562
Bse1I ACTGG 3 cut(s) 810, 1092, 1139
Bse3DI GCAATG 1 cut(s) 825
Bse8I GATNNNNATC 1 cut(s) 760
BseAI TCCGGA 1 cut(s) 204
BseBI CCWGG 1 cut(s) 287
BseDI CCNNGG 7 cut(s) 12, 73, 285, 561, 751, 964, 1006
BseGI GGATG 4 cut(s) 213, 615, 978, 986
BseJI GATNNNNATC 1 cut(s) 760
BseLI CCNNNNNNNGG 1 cut(s) 562
BseMI GCAATG 1 cut(s) 825
BseMII CTCAG 3 cut(s) 120, 209, 395
BseNI ACTGG 3 cut(s) 810, 1092, 1139
BseRI GAGGAG 2 cut(s) 235, 323
BseSI GKGCMC 1 cut(s) 391
BseXI GCAGC 6 cut(s) 38, 364, 483, 578, 592, 673
BseYI CCCAGC 1 cut(s) 667
BsgI GTGCAG 1 cut(s) 45
Bsh1236I CGCG 2 cut(s) 75, 257
BshFI GGCC 1 cut(s) 389
BshNI GGYRCC 1 cut(s) 8
BsiHKAI GWGCWC 2 cut(s) 1032, 1042
BsiSI CCGG 5 cut(s) 205, 264, 629, 753, 1061
BslFI GGGAC 1 cut(s) 1071
BslI CCNNNNNNNGG 1 cut(s) 562
BsmAI GTCTC 1 cut(s) 954
BsmFI GGGAC 1 cut(s) 1071
BsnI GGCC 1 cut(s) 389
Bso31I GGTCTC 1 cut(s) 954
Bsp120I GGGCCC 1 cut(s) 387
Bsp1286I GDGCHC 3 cut(s) 391, 1032, 1042
Bsp13I TCCGGA 1 cut(s) 204
Bsp1407I TGTACA 1 cut(s) 822
Bsp143I GATC 7 cut(s) 139, 154, 201, 646, 776, 835, 975
Bsp19I CCATGG 1 cut(s) 1006
BspACI CCGC 9 cut(s) 47, 73, 75, 78, 118, 290, 305, 556, 664
BspANI GGCC 1 cut(s) 389
BspCNI CTCAG 3 cut(s) 121, 210, 396
BspEI TCCGGA 1 cut(s) 204
BspFNI CGCG 2 cut(s) 75, 257
BspHI TCATGA 1 cut(s) 351
BspLI GGNNCC 9 cut(s) 10, 99, 150, 203, 388, 389, 460, 648, 1059
BspPI GGATC 7 cut(s) 149, 196, 209, 641, 654, 784, 843
BspT107I GGYRCC 1 cut(s) 8
BspTNI GGTCTC 1 cut(s) 954
BsrBI CCGCTC 2 cut(s) 305, 558
BsrDI GCAATG 1 cut(s) 825
BsrGI TGTACA 1 cut(s) 822
BsrI ACTGG 3 cut(s) 810, 1092, 1139
BssECI CCNNGG 7 cut(s) 12, 73, 285, 561, 751, 964, 1006
BssMI GATC 7 cut(s) 139, 154, 201, 646, 776, 835, 975
BssNI GRCGYC 2 cut(s) 9, 176
BssT1I CCWWGG 3 cut(s) 561, 964, 1006
Bst2UI CCWGG 1 cut(s) 287
Bst4CI ACNGT 4 cut(s) 197, 589, 785, 1021
Bst6I CTCTTC 1 cut(s) 34
BstACI GRCGYC 2 cut(s) 9, 176
BstAPI GCANNNNNTGC 1 cut(s) 23
BstAUI TGTACA 1 cut(s) 822
BstBAI YACGTR 2 cut(s) 184, 887
BstC8I GCNNGC 2 cut(s) 31, 370
BstDEI CTNAG 5 cut(s) 129, 218, 404, 654, 862
BstDSI CCRYGG 2 cut(s) 73, 1006
BstF5I GGATG 4 cut(s) 213, 615, 978, 986
BstFNI CGCG 2 cut(s) 75, 257
BstH2I RGCGCY 1 cut(s) 12
BstHHI GCGC 4 cut(s) 11, 257, 342, 453
BstKTI GATC 7 cut(s) 142, 157, 204, 649, 779, 838, 978
BstMAI GTCTC 1 cut(s) 954
BstMBI GATC 7 cut(s) 139, 154, 201, 646, 776, 835, 975
BstMWI GCNNNNNNNGC 6 cut(s) 23, 134, 374, 386, 602, 867
BstNI CCWGG 1 cut(s) 287
BstSCI CCNGG 2 cut(s) 285, 751
BstSLI GKGCMC 1 cut(s) 391
BstUI CGCG 2 cut(s) 75, 257
BstV1I GCAGC 6 cut(s) 38, 364, 483, 578, 592, 673
BstX2I RGATCY 4 cut(s) 201, 646, 776, 835
BstYI RGATCY 4 cut(s) 201, 646, 776, 835
BsuI GTATCC 1 cut(s) 810
BsuRI GGCC 1 cut(s) 389
BtgI CCRYGG 2 cut(s) 73, 1006
BtsCI GGATG 4 cut(s) 213, 615, 978, 986
BtsI GCAGTG 1 cut(s) 945
BtsIMutI CAGTG 2 cut(s) 803, 945
Cac8I GCNNGC 2 cut(s) 31, 370
CaiI CAGNNNCTG 1 cut(s) 667
CciI TCATGA 1 cut(s) 351
CfoI GCGC 4 cut(s) 11, 257, 342, 453
Cfr13I GGNCC 4 cut(s) 387, 388, 578, 1058
Cfr42I CCGCGG 1 cut(s) 76
CseI GACGC 2 cut(s) 165, 246
Csp6I GTAC 5 cut(s) 123, 514, 792, 823, 955
CspCI CAANNNNNGTGG 2 cut(s) 792, 827
CviAII CATG 5 cut(s) 352, 795, 858, 979, 1007
CviQI GTAC 5 cut(s) 123, 514, 792, 823, 955
DdeI CTNAG 5 cut(s) 129, 218, 404, 654, 862
DinI GGCGCC 1 cut(s) 10
DpnI GATC 7 cut(s) 141, 156, 203, 648, 778, 837, 977
DpnII GATC 7 cut(s) 139, 154, 201, 646, 776, 835, 975
Eam1104I CTCTTC 1 cut(s) 34
EarI CTCTTC 1 cut(s) 34
EciI GGCGGA 1 cut(s) 305
Eco130I CCWWGG 3 cut(s) 561, 964, 1006
Eco24I GRGCYC 1 cut(s) 391
Eco31I GGTCTC 1 cut(s) 954
Eco47I GGWCC 2 cut(s) 578, 1058
Eco72I CACGTG 1 cut(s) 184
EcoO109I RGGNCCY 2 cut(s) 387, 388
EcoRI GAATTC 2 cut(s) 355, 433
EcoRII CCWGG 1 cut(s) 285
EcoT14I CCWWGG 3 cut(s) 561, 964, 1006
EcoT38I GRGCYC 1 cut(s) 391
EgeI GGCGCC 1 cut(s) 10
EheI GGCGCC 1 cut(s) 10
ErhI CCWWGG 3 cut(s) 561, 964, 1006
FaeI CATG 5 cut(s) 355, 798, 861, 982, 1010
FaqI GGGAC 1 cut(s) 1071
FatI CATG 5 cut(s) 351, 794, 857, 978, 1006
FbaI TGATCA 1 cut(s) 975
FblI GTMKAC 1 cut(s) 105
FokI GGATG 4 cut(s) 220, 602, 973, 985
FriOI GRGCYC 1 cut(s) 391
FspBI CTAG 1 cut(s) 1035
FspI TGCGCA 2 cut(s) 341, 452
GlaI GCGC 4 cut(s) 10, 256, 341, 452
GsaI CCCAGC 1 cut(s) 671
GsuI CTGGAG 2 cut(s) 23, 253
HaeII RGCGCY 1 cut(s) 12
HaeIII GGCC 1 cut(s) 389
HapII CCGG 5 cut(s) 205, 264, 629, 753, 1061
HgaI GACGC 2 cut(s) 165, 246
HhaI GCGC 4 cut(s) 11, 257, 342, 453
Hin1I GRCGYC 2 cut(s) 9, 176
Hin1II CATG 5 cut(s) 355, 798, 861, 982, 1010
Hin6I GCGC 4 cut(s) 9, 255, 340, 451
HinP1I GCGC 4 cut(s) 9, 255, 340, 451
HinfI GANTC 3 cut(s) 64, 756, 881
HpaII CCGG 5 cut(s) 205, 264, 629, 753, 1061
Hpy166II GTNNAC 2 cut(s) 106, 243
Hpy188I TCNGA 5 cut(s) 275, 531, 574, 651, 766
Hpy188III TCNNGA 9 cut(s) 61, 68, 205, 232, 300, 318, 352, 399, 619
Hpy8I GTNNAC 2 cut(s) 106, 243
Hpy99I CGWCG 1 cut(s) 262
HpyAV CCTTC 5 cut(s) 270, 287, 569, 626, 1000
HpyCH4III ACNGT 4 cut(s) 197, 589, 785, 1021
HpyCH4IV ACGT 5 cut(s) 108, 183, 696, 852, 886
HpyCH4V TGCA 6 cut(s) 26, 380, 641, 661, 818, 1118
HpyF10VI GCNNNNNNNGC 6 cut(s) 23, 134, 374, 386, 602, 867
HpyF3I CTNAG 5 cut(s) 129, 218, 404, 654, 862
HpySE526I ACGT 5 cut(s) 108, 183, 696, 852, 886
Hsp92I GRCGYC 2 cut(s) 9, 176
Hsp92II CATG 5 cut(s) 355, 798, 861, 982, 1010
HspAI GCGC 4 cut(s) 9, 255, 340, 451
KasI GGCGCC 1 cut(s) 8
Kpn2I TCCGGA 1 cut(s) 204
Ksp22I TGATCA 1 cut(s) 975
KspI CCGCGG 1 cut(s) 76
Kzo9I GATC 7 cut(s) 139, 154, 201, 646, 776, 835, 975
LmnI GCTCC 6 cut(s) 134, 148, 222, 302, 458, 563
Lsp1109I GCAGC 6 cut(s) 38, 364, 483, 578, 592, 673
LweI GCATC 6 cut(s) 276, 389, 578, 624, 628, 648
MaeI CTAG 1 cut(s) 1035
MaeII ACGT 5 cut(s) 108, 183, 696, 852, 886
MaeIII GTNAC 3 cut(s) 177, 1010, 1123
MalI GATC 7 cut(s) 141, 156, 203, 648, 778, 837, 977
MbiI CCGCTC 2 cut(s) 305, 558
MboI GATC 7 cut(s) 139, 154, 201, 646, 776, 835, 975
MboII GAAGA 2 cut(s) 51, 779
MfeI CAATTG 3 cut(s) 540, 680, 708
MflI RGATCY 4 cut(s) 201, 646, 776, 835
MhlI GDGCHC 3 cut(s) 391, 1032, 1042
MluCI AATT 7 cut(s) 355, 433, 540, 680, 708, 744, 906
Mly113I GGCGCC 1 cut(s) 9
MmeI TCCRAC 1 cut(s) 674
MroI TCCGGA 1 cut(s) 204
MroXI GAANNNNTTC 1 cut(s) 359
MseI TTAA 2 cut(s) 1001, 1016
MslI CAYNNNNRTG 1 cut(s) 889
MspA1I CMGCKG 3 cut(s) 75, 128, 664
MspI CCGG 5 cut(s) 205, 264, 629, 753, 1061
MspR9I CCNGG 2 cut(s) 287, 753
MunI CAATTG 3 cut(s) 540, 680, 708
MvaI CCWGG 1 cut(s) 287
MvnI CGCG 2 cut(s) 75, 257
MwoI GCNNNNNNNGC 6 cut(s) 23, 134, 374, 386, 602, 867
NarI GGCGCC 1 cut(s) 9
NciI CCSGG 1 cut(s) 753
NcoI CCATGG 1 cut(s) 1006
NdeII GATC 7 cut(s) 139, 154, 201, 646, 776, 835, 975
NlaIII CATG 5 cut(s) 355, 798, 861, 982, 1010
NlaIV GGNNCC 9 cut(s) 10, 99, 150, 203, 388, 389, 460, 648, 1059
NmeAIII GCCGAG 1 cut(s) 37
NmuCI GTSAC 1 cut(s) 177
NsbI TGCGCA 2 cut(s) 341, 452
PagI TCATGA 1 cut(s) 351
PcsI WCGNNNNNNNCGW 1 cut(s) 189
PdmI GAANNNNTTC 1 cut(s) 359
PfeI GAWTC 3 cut(s) 64, 756, 881
PflFI GACNNNGTC 1 cut(s) 739
PluTI GGCGCC 1 cut(s) 12
PmaCI CACGTG 1 cut(s) 184
PmlI CACGTG 1 cut(s) 184
Ppu21I YACGTR 2 cut(s) 184, 887
Psp1406I AACGTT 1 cut(s) 696
Psp6I CCWGG 1 cut(s) 285
PspCI CACGTG 1 cut(s) 184
PspFI CCCAGC 1 cut(s) 667
PspGI CCWGG 1 cut(s) 285
PspN4I GGNNCC 9 cut(s) 10, 99, 150, 203, 388, 389, 460, 648, 1059
PspOMI GGGCCC 1 cut(s) 387
PspPI GGNCC 4 cut(s) 387, 388, 578, 1058
PstNI CAGNNNCTG 1 cut(s) 667
PsuI RGATCY 4 cut(s) 201, 646, 776, 835
PsyI GACNNNGTC 1 cut(s) 739
PvuII CAGCTG 1 cut(s) 128
RsaI GTAC 5 cut(s) 124, 515, 793, 824, 956
RsaNI GTAC 5 cut(s) 123, 514, 792, 823, 955
RseI CAYNNNNRTG 1 cut(s) 889
SacII CCGCGG 1 cut(s) 76
SaqAI TTAA 2 cut(s) 1001, 1016
Sau3AI GATC 7 cut(s) 139, 154, 201, 646, 776, 835, 975
Sau96I GGNCC 4 cut(s) 387, 388, 578, 1058
ScrFI CCNGG 2 cut(s) 287, 753
SduI GDGCHC 3 cut(s) 391, 1032, 1042
SfaNI GCATC 6 cut(s) 276, 389, 578, 624, 628, 648
SfoI GGCGCC 1 cut(s) 10
Sfr303I CCGCGG 1 cut(s) 76
SgrBI CCGCGG 1 cut(s) 76
SinI GGWCC 2 cut(s) 578, 1058
SmiMI CAYNNNNRTG 1 cut(s) 889
SmlI CTYRAG 1 cut(s) 872
SmoI CTYRAG 1 cut(s) 872
Sse9I AATT 7 cut(s) 355, 433, 540, 680, 708, 744, 906
SsiI CCGC 9 cut(s) 47, 73, 75, 78, 118, 290, 305, 556, 664
SspDI GGCGCC 1 cut(s) 8
SspI AATATT 1 cut(s) 426
SspMI CTAG 1 cut(s) 1035
StyD4I CCNGG 2 cut(s) 285, 751
StyI CCWWGG 3 cut(s) 561, 964, 1006
TaaI ACNGT 4 cut(s) 197, 589, 785, 1021
TaiI ACGT 5 cut(s) 111, 186, 699, 855, 889
TaqI TCGA 3 cut(s) 60, 192, 1131
TasI AATT 7 cut(s) 355, 433, 540, 680, 708, 744, 906
TatI WGTACW 1 cut(s) 822
TauI GCSGC 4 cut(s) 50, 78, 120, 667
TfiI GAWTC 3 cut(s) 64, 756, 881
Tru1I TTAA 2 cut(s) 1001, 1016
Tru9I TTAA 2 cut(s) 1001, 1016
TscAI CASTG 2 cut(s) 810, 952
TseFI GTSAC 1 cut(s) 177
TseI GCWGC 6 cut(s) 26, 377, 496, 566, 605, 661
Tsp45I GTSAC 1 cut(s) 177
TspDTI ATGAA 2 cut(s) 340, 368
TspGWI ACGGA 1 cut(s) 972
TspRI CASTG 2 cut(s) 810, 952
Tth111I GACNNNGTC 1 cut(s) 739
VpaK11BI GGWCC 2 cut(s) 578, 1058
XapI RAATTY 2 cut(s) 355, 433
XmiI GTMKAC 1 cut(s) 105
XmnI GAANNNNTTC 1 cut(s) 359
XspI CTAG 1 cut(s) 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.