Rh2DG577600

Equilibrative nucleotide transporter 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0008216
Physical Location & Seq
Forward (+)
80837564 .. 80841047
3484 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG577600.1

Sequence Viewer

Length: 1197 bp
ATGGTAGTCTGTTGGCTTCTGGGAAATGGGTGCCTATTTTCATGGAACAGTATGCTTACAATCGAAGATTACTATGTTGCCTTGTTCCCGAGATATCATCCGGCGAGGGTCCTCACTCTAGTGTATCAGCCGTTTGCGCTTTTTACACTCATAGCATTGTCATATAATGAAGCAAAAATCAATACTAGGAAGCGGAATTTATTTGGATATACCTTATTTTTCCTAAGTACTCTTTTGGTGCTAGTGTTGGATTTAGCTACATCCGGAAAAGGAGGTATTGGAACTTACATCGGAATCTGTGCCATTAGTGGTGCTTTTGGAGTTGCAGATGCTCACGTGCAAGGAGGAATGATTGGAGACCTGTCGTTCATGAAACCAGAATTCATCCAATCTTTCCTTGCTGGCTTGGCTGCATCAGGGGCCCTAACCTCTGGACTGAGGCTACTTACAAAGGCAATATTTGAGAATTCCCAGAATGGTCTGCGCAAGGGAGCCATTATGTTCTTCTCCATCTCTACATTCTTTGAGCTGCTATGTGTTTTTCTGTACGCTGTTGTCTTTCCGAAGCTACCAGTTGTGAAGTTCTACCGCTCCAAGGCAGCATCAGAAGGATCTAAAACTGTTTCGGCTGACCTTGCTGCTGGTGGCATCCAGACATTACCGGAAGGAGATGCAGAGGATCCGACTAAGATGCAGCGGCTGGGGAACAAACAATTGTTAGCTCAAAACGTTGATTACGCAATTGATATGTTTCTAATCTATGTGCTGACCTTGTCAATTTTCCCCGGATTCCTATCAGAAGATACGGGATCTCACAGTTTGGGTACATGGTATGCACTGGTTTTGATTGCAATGTACAATGTGTGGGATCTCATCGGGAGATACGTTCCATGCTTGGATTGCCTCAAGTTAGAATCACGTAAATGGCTGATGGTTGTAATTGTTGCTCGTTTCTTACTCGTTCCTGCGTTCTATTTCACTGCCAAGTATGGAGACCAAGGCTGGATGATCATGCTTACATCCTTCTTGGGTTTAACCAATGGTTACTTAACTGTTTGTGTGCTCACTACAGCACCTAAAGGCTACAAGGGACCGGAACAAAATGCTTTGGGAAATCTACTGGTAGTGTTCTTAGTATTAGGTATATTTGCAGGAGTAACACTCGACTGGTTGTGGCTTATAGGCAAGGGCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nucleoside_tran

Protein Analysis

398

Amino Acids

43.83

Weight (kDa)

8.54

Isoelectric Point (pI)

28.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nucleoside_tran PF01733 107 - 392 1.3e-35 Nucleoside transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 485
AccB1I GGYRCC 1 cut(s) 30
AccBSI CCGCTC 1 cut(s) 591
AccIII TCCGGA 1 cut(s) 263
AciI CCGC 3 cut(s) 193, 589, 697
AclI AACGTT 1 cut(s) 729
AclWI GGATC 5 cut(s) 619, 674, 687, 817, 876
AcsI RAATTY 3 cut(s) 196, 380, 466
AcvI CACGTG 1 cut(s) 337
AfaI GTAC 4 cut(s) 229, 548, 826, 857
AfiI CCNNNNNNNGG 1 cut(s) 595
AleI CACNNNNGTG 1 cut(s) 119
AluBI AGCT 4 cut(s) 257, 529, 568, 722
AluI AGCT 4 cut(s) 257, 529, 568, 722
Alw21I GWGCWC 1 cut(s) 1065
Alw26I GTCTC 2 cut(s) 351, 987
AlwI GGATC 5 cut(s) 619, 674, 687, 817, 876
AlwNI CAGNNNCTG 1 cut(s) 700
Ama87I CYCGRG 1 cut(s) 88
Aor13HI TCCGGA 1 cut(s) 263
AoxI GGCC 1 cut(s) 420
ApaI GGGCCC 1 cut(s) 424
ApeKI GCWGC 5 cut(s) 410, 529, 599, 638, 694
ApoI RAATTY 3 cut(s) 196, 380, 466
AspLEI GCGC 2 cut(s) 139, 486
AspS9I GGNCC 4 cut(s) 109, 420, 421, 1091
AsuC2I CCSGG 1 cut(s) 786
AvaI CYCGRG 1 cut(s) 88
AvaII GGWCC 2 cut(s) 109, 1091
BaeGI GKGCMC 1 cut(s) 424
BamHI GGATCC 1 cut(s) 679
BanI GGYRCC 1 cut(s) 30
BanII GRGCYC 1 cut(s) 424
BbrPI CACGTG 1 cut(s) 337
Bbv12I GWGCWC 1 cut(s) 1065
BbvI GCAGC 5 cut(s) 397, 516, 611, 625, 706
BccI CCATC 2 cut(s) 518, 925
BceAI ACGGC 1 cut(s) 115
BcgI CGANNNNNNTGC 2 cut(s) 673, 707
BclI TGATCA 1 cut(s) 1008
BcnI CCSGG 1 cut(s) 786
BcoDI GTCTC 2 cut(s) 351, 987
BfaI CTAG 3 cut(s) 119, 186, 242
BfmI CTRYAG 1 cut(s) 1068
BisI GCNGC 6 cut(s) 411, 530, 600, 639, 695, 698
BlsI GCNGC 6 cut(s) 412, 531, 601, 640, 696, 699
BmcAI AGTACT 1 cut(s) 229
Bme1390I CCNGG 1 cut(s) 786
Bme18I GGWCC 2 cut(s) 109, 1091
BmeT110I CYCGRG 1 cut(s) 88
BmgT120I GGNCC 4 cut(s) 109, 420, 421, 1091
BmiI GGNNCC 7 cut(s) 32, 110, 421, 422, 493, 681, 1092
BmrFI CCNGG 1 cut(s) 786
BmsI GCATC 6 cut(s) 319, 422, 611, 657, 661, 681
BplI GAGNNNNNCTC 2 cut(s) 1146, 1178
BpuEI CTTGAG 1 cut(s) 890
BpuMI CCSGG 1 cut(s) 786
BsaAI YACGTR 2 cut(s) 337, 920
BsaBI GATNNNNATC 1 cut(s) 793
BsaI GGTCTC 2 cut(s) 351, 987
BsaJI CCNNGG 3 cut(s) 594, 784, 997
BsaWI WCCGGW 3 cut(s) 263, 661, 1093
Bsc4I CCNNNNNNNGG 1 cut(s) 595
Bse1I ACTGG 4 cut(s) 572, 843, 1125, 1172
Bse3DI GCAATG 1 cut(s) 858
Bse8I GATNNNNATC 1 cut(s) 793
BseAI TCCGGA 1 cut(s) 263
BseDI CCNNGG 3 cut(s) 594, 784, 997
BseGI GGATG 6 cut(s) 97, 260, 384, 648, 1011, 1019
BseJI GATNNNNATC 1 cut(s) 793
BseLI CCNNNNNNNGG 1 cut(s) 595
BseMI GCAATG 1 cut(s) 858
BseMII CTCAG 1 cut(s) 428
BseNI ACTGG 4 cut(s) 572, 843, 1125, 1172
BseSI GKGCMC 1 cut(s) 424
BseXI GCAGC 5 cut(s) 397, 516, 611, 625, 706
BseYI CCCAGC 1 cut(s) 700
BshFI GGCC 1 cut(s) 422
BshNI GGYRCC 1 cut(s) 30
BsiHKAI GWGCWC 1 cut(s) 1065
BsiHKCI CYCGRG 1 cut(s) 88
BsiSI CCGG 5 cut(s) 101, 264, 662, 786, 1094
BslFI GGGAC 1 cut(s) 1104
BslI CCNNNNNNNGG 1 cut(s) 595
BsmAI GTCTC 2 cut(s) 351, 987
BsmFI GGGAC 1 cut(s) 1104
BsnI GGCC 1 cut(s) 422
Bso31I GGTCTC 2 cut(s) 351, 987
BsoBI CYCGRG 1 cut(s) 88
Bsp120I GGGCCC 1 cut(s) 420
Bsp1286I GDGCHC 2 cut(s) 424, 1065
Bsp13I TCCGGA 1 cut(s) 263
Bsp1407I TGTACA 1 cut(s) 855
Bsp143I GATC 5 cut(s) 611, 679, 809, 868, 1008
BspACI CCGC 3 cut(s) 193, 589, 697
BspANI GGCC 1 cut(s) 422
BspCNI CTCAG 1 cut(s) 429
BspEI TCCGGA 1 cut(s) 263
BspHI TCATGA 1 cut(s) 369
BspLI GGNNCC 7 cut(s) 32, 110, 421, 422, 493, 681, 1092
BspPI GGATC 5 cut(s) 619, 674, 687, 817, 876
BspT107I GGYRCC 1 cut(s) 30
BspTNI GGTCTC 2 cut(s) 351, 987
BsrBI CCGCTC 1 cut(s) 591
BsrDI GCAATG 1 cut(s) 858
BsrGI TGTACA 1 cut(s) 855
BsrI ACTGG 4 cut(s) 572, 843, 1125, 1172
BssECI CCNNGG 3 cut(s) 594, 784, 997
BssMI GATC 5 cut(s) 611, 679, 809, 868, 1008
BssT1I CCWWGG 2 cut(s) 594, 997
Bst4CI ACNGT 4 cut(s) 50, 622, 818, 1054
BstAUI TGTACA 1 cut(s) 855
BstBAI YACGTR 2 cut(s) 337, 920
BstC8I GCNNGC 1 cut(s) 403
BstDEI CTNAG 4 cut(s) 224, 437, 687, 1132
BstF5I GGATG 6 cut(s) 97, 260, 384, 648, 1011, 1019
BstHHI GCGC 2 cut(s) 139, 486
BstKTI GATC 5 cut(s) 614, 682, 812, 871, 1011
BstMAI GTCTC 2 cut(s) 351, 987
BstMBI GATC 5 cut(s) 611, 679, 809, 868, 1008
BstMWI GCNNNNNNNGC 5 cut(s) 136, 407, 419, 635, 900
BstSCI CCNGG 1 cut(s) 784
BstSFI CTRYAG 1 cut(s) 1068
BstSLI GKGCMC 1 cut(s) 424
BstV1I GCAGC 5 cut(s) 397, 516, 611, 625, 706
BstX2I RGATCY 4 cut(s) 611, 679, 809, 868
BstYI RGATCY 4 cut(s) 611, 679, 809, 868
BsuRI GGCC 1 cut(s) 422
BtsCI GGATG 6 cut(s) 97, 260, 384, 648, 1011, 1019
BtsI GCAGTG 1 cut(s) 978
BtsIMutI CAGTG 2 cut(s) 836, 978
Cac8I GCNNGC 1 cut(s) 403
CaiI CAGNNNCTG 1 cut(s) 700
CciI TCATGA 1 cut(s) 369
CfoI GCGC 2 cut(s) 139, 486
Cfr13I GGNCC 4 cut(s) 109, 420, 421, 1091
Csp6I GTAC 4 cut(s) 228, 547, 825, 856
CviAII CATG 5 cut(s) 42, 370, 828, 891, 1012
CviQI GTAC 4 cut(s) 228, 547, 825, 856
DdeI CTNAG 4 cut(s) 224, 437, 687, 1132
DpnI GATC 5 cut(s) 613, 681, 811, 870, 1010
DpnII GATC 5 cut(s) 611, 679, 809, 868, 1008
Eco130I CCWWGG 2 cut(s) 594, 997
Eco24I GRGCYC 1 cut(s) 424
Eco31I GGTCTC 2 cut(s) 351, 987
Eco32I GATATC 1 cut(s) 95
Eco47I GGWCC 2 cut(s) 109, 1091
Eco72I CACGTG 1 cut(s) 337
Eco88I CYCGRG 1 cut(s) 88
EcoO109I RGGNCCY 3 cut(s) 109, 420, 421
EcoRI GAATTC 2 cut(s) 380, 466
EcoRV GATATC 1 cut(s) 95
EcoT14I CCWWGG 2 cut(s) 594, 997
EcoT38I GRGCYC 1 cut(s) 424
ErhI CCWWGG 2 cut(s) 594, 997
FaeI CATG 5 cut(s) 45, 373, 831, 894, 1015
FaqI GGGAC 1 cut(s) 1104
FatI CATG 5 cut(s) 41, 369, 827, 890, 1011
FbaI TGATCA 1 cut(s) 1008
Fnu4HI GCNGC 6 cut(s) 411, 530, 600, 639, 695, 698
FokI GGATG 6 cut(s) 84, 247, 371, 635, 1006, 1018
FriOI GRGCYC 1 cut(s) 424
Fsp4HI GCNGC 6 cut(s) 411, 530, 600, 639, 695, 698
FspBI CTAG 3 cut(s) 119, 186, 242
FspI TGCGCA 1 cut(s) 485
GlaI GCGC 2 cut(s) 138, 485
GluI GCNGC 6 cut(s) 411, 530, 600, 639, 695, 698
GsaI CCCAGC 1 cut(s) 704
HaeIII GGCC 1 cut(s) 422
HapII CCGG 5 cut(s) 101, 264, 662, 786, 1094
HhaI GCGC 2 cut(s) 139, 486
Hin1II CATG 5 cut(s) 45, 373, 831, 894, 1015
Hin6I GCGC 2 cut(s) 137, 484
HinP1I GCGC 2 cut(s) 137, 484
HinfI GANTC 3 cut(s) 294, 789, 914
HpaII CCGG 5 cut(s) 101, 264, 662, 786, 1094
Hpy188I TCNGA 5 cut(s) 293, 564, 607, 684, 799
Hpy188III TCNNGA 6 cut(s) 88, 264, 370, 432, 652, 877
HpyAV CCTTC 3 cut(s) 602, 659, 1033
HpyCH4III ACNGT 4 cut(s) 50, 622, 818, 1054
HpyCH4IV ACGT 4 cut(s) 336, 729, 885, 919
HpyCH4V TGCA 8 cut(s) 326, 340, 413, 674, 694, 836, 851, 1151
HpyF10VI GCNNNNNNNGC 5 cut(s) 136, 407, 419, 635, 900
HpyF3I CTNAG 4 cut(s) 224, 437, 687, 1132
HpySE526I ACGT 4 cut(s) 336, 729, 885, 919
Hsp92II CATG 5 cut(s) 45, 373, 831, 894, 1015
HspAI GCGC 2 cut(s) 137, 484
Kpn2I TCCGGA 1 cut(s) 263
Ksp22I TGATCA 1 cut(s) 1008
Kzo9I GATC 5 cut(s) 611, 679, 809, 868, 1008
LmnI GCTCC 2 cut(s) 491, 596
Lsp1109I GCAGC 5 cut(s) 397, 516, 611, 625, 706
LweI GCATC 6 cut(s) 319, 422, 611, 657, 661, 681
MaeI CTAG 3 cut(s) 119, 186, 242
MaeII ACGT 4 cut(s) 336, 729, 885, 919
MaeIII GTNAC 2 cut(s) 1043, 1156
MalI GATC 5 cut(s) 613, 681, 811, 870, 1010
MbiI CCGCTC 1 cut(s) 591
MboI GATC 5 cut(s) 611, 679, 809, 868, 1008
MboII GAAGA 3 cut(s) 77, 496, 812
MfeI CAATTG 2 cut(s) 713, 741
MflI RGATCY 4 cut(s) 611, 679, 809, 868
MhlI GDGCHC 2 cut(s) 424, 1065
MluCI AATT 7 cut(s) 196, 380, 466, 713, 741, 777, 939
MmeI TCCRAC 2 cut(s) 228, 707
MnlI CCTC 8 cut(s) 99, 122, 266, 338, 432, 439, 670, 914
MroI TCCGGA 1 cut(s) 263
MseI TTAA 2 cut(s) 1034, 1049
MslI CAYNNNNRTG 2 cut(s) 119, 922
MspA1I CMGCKG 1 cut(s) 697
MspI CCGG 5 cut(s) 101, 264, 662, 786, 1094
MspR9I CCNGG 1 cut(s) 786
MunI CAATTG 2 cut(s) 713, 741
MwoI GCNNNNNNNGC 5 cut(s) 136, 407, 419, 635, 900
NciI CCSGG 1 cut(s) 786
NdeII GATC 5 cut(s) 611, 679, 809, 868, 1008
NlaIII CATG 5 cut(s) 45, 373, 831, 894, 1015
NlaIV GGNNCC 7 cut(s) 32, 110, 421, 422, 493, 681, 1092
NsbI TGCGCA 1 cut(s) 485
OliI CACNNNNGTG 1 cut(s) 119
PagI TCATGA 1 cut(s) 369
PcsI WCGNNNNNNNCGW 1 cut(s) 882
PfeI GAWTC 3 cut(s) 294, 789, 914
PflFI GACNNNGTC 1 cut(s) 772
PkrI GCNGC 6 cut(s) 412, 531, 601, 640, 696, 699
PmaCI CACGTG 1 cut(s) 337
PmlI CACGTG 1 cut(s) 337
Ppu21I YACGTR 2 cut(s) 337, 920
PpuMI RGGWCCY 1 cut(s) 109
Psp1406I AACGTT 1 cut(s) 729
Psp5II RGGWCCY 1 cut(s) 109
PspCI CACGTG 1 cut(s) 337
PspFI CCCAGC 1 cut(s) 700
PspN4I GGNNCC 7 cut(s) 32, 110, 421, 422, 493, 681, 1092
PspOMI GGGCCC 1 cut(s) 420
PspPI GGNCC 4 cut(s) 109, 420, 421, 1091
PspPPI RGGWCCY 1 cut(s) 109
PstNI CAGNNNCTG 1 cut(s) 700
PsuI RGATCY 4 cut(s) 611, 679, 809, 868
PsyI GACNNNGTC 1 cut(s) 772
RsaI GTAC 4 cut(s) 229, 548, 826, 857
RsaNI GTAC 4 cut(s) 228, 547, 825, 856
RseI CAYNNNNRTG 2 cut(s) 119, 922
SaqAI TTAA 2 cut(s) 1034, 1049
SatI GCNGC 6 cut(s) 411, 530, 600, 639, 695, 698
Sau3AI GATC 5 cut(s) 611, 679, 809, 868, 1008
Sau96I GGNCC 4 cut(s) 109, 420, 421, 1091
ScaI AGTACT 1 cut(s) 229
ScrFI CCNGG 1 cut(s) 786
SduI GDGCHC 2 cut(s) 424, 1065
SfaNI GCATC 6 cut(s) 319, 422, 611, 657, 661, 681
SfcI CTRYAG 1 cut(s) 1068
SinI GGWCC 2 cut(s) 109, 1091
SmiMI CAYNNNNRTG 2 cut(s) 119, 922
SmlI CTYRAG 1 cut(s) 905
SmoI CTYRAG 1 cut(s) 905
Sse9I AATT 7 cut(s) 196, 380, 466, 713, 741, 777, 939
SsiI CCGC 3 cut(s) 193, 589, 697
SspI AATATT 1 cut(s) 459
SspMI CTAG 3 cut(s) 119, 186, 242
StyD4I CCNGG 1 cut(s) 784
StyI CCWWGG 2 cut(s) 594, 997
TaaI ACNGT 4 cut(s) 50, 622, 818, 1054
TaiI ACGT 4 cut(s) 339, 732, 888, 922
TaqI TCGA 2 cut(s) 63, 1164
TasI AATT 7 cut(s) 196, 380, 466, 713, 741, 777, 939
TatI WGTACW 2 cut(s) 227, 855
TauI GCSGC 1 cut(s) 700
TfiI GAWTC 3 cut(s) 294, 789, 914
Tru1I TTAA 2 cut(s) 1034, 1049
Tru9I TTAA 2 cut(s) 1034, 1049
TscAI CASTG 2 cut(s) 843, 985
TseI GCWGC 5 cut(s) 410, 529, 599, 638, 694
TspDTI ATGAA 5 cut(s) 30, 183, 358, 373, 386
TspRI CASTG 2 cut(s) 843, 985
Tth111I GACNNNGTC 1 cut(s) 772
VpaK11BI GGWCC 2 cut(s) 109, 1091
XapI RAATTY 3 cut(s) 196, 380, 466
XspI CTAG 3 cut(s) 119, 186, 242
ZrmI AGTACT 1 cut(s) 229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.