Rh2CG538600

Equilibrative nucleotide transporter 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0008216
Physical Location & Seq
Forward (+)
71597235 .. 71599230
1996 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG538600.1

Sequence Viewer

Length: 1146 bp
ATGCTTACAATCGAAGATTACTATGTTGCCTTGTTCCCGAGATATCATCCGGCGAGGGTCCTCACTCTAGTGTATCAGCCGTTTGCGCTTTTTACACTCATAGCATTGTCATATAATGAAGCAAAGATCAATACTAGGAAGCGGAATTTATTTGGATATACCTTATTTTTCCTAAGTACTCTTTTGGTGCTAGTGTTGGATTTAGCTACATCCGGAAAAGGAGGTATTGGAACTTACATCGGAATCTGTGCCATTAGTGGTGCTTTTGGAGTTGCAGATGCTCACGTGCAAGGAGGAATGATTGGAGACCTGTCGTTCATGAAACCAGAATTCATCCAATCTTTCCTTGTTGGCTTGGCTGCATCAGGGGCCCTAACCTCTGGACTGAGGCTACTTACAAAGGCAATATTTGAGAATTCCCAGAATGGTCTGCGCAAGGGAGCCATTATGTTCTTTTCCATCTCTACATTCTTTGAGCTGCTATGTGTTTTTCTGTACGCTGTTGTCTTTCCGAAGCTACCAATCGTGAAGTTCTACCGCTCCAAGGCAGCATCAGAAGGATCTAAAACTGTTTCGGCTGACCTTGCTGCTGGTGGCATCCAGACATTACCGGAAGGAGATGCAGAGGATCCGACTAAGATGCAGCGGCTGGGGAACAAACAATTGTTAGCTCAAAACGTTGATTACGCAATTGATATGTTTCTAATCTATGTGCTGACCTTGTCAATTTTCCCCGGATTCCTATCAGAAGATACGGGATCTCACAGTTTGGGTACATGGTATGCACTGGTTTTGATTGCAATGTACAATGTGTGGGATCTCATAGGGAGATTCGTTCCATGCTTAGATTGCCTCAAGTTAGAATCACGTAAATGGCTGATGGTTGTAATTGTTGCTCGTTTCTTACTCGTTCCTGCGTTCTATTTCACTGCCAAGTACGGAGACCAAGGCTGGATGATCATGCTTACATCCTTCTTGGGTTTAACCAATGGTTACTTAACTGTTTGTGTGCTCACTACAGCACCTAAAGGCTACAAGGGACCGGAACAAAATGCTTTGGGAAATCTACTGGTAGTGTTCTTATTATTAGGTATATTTGCAGGAGTAACACTCGACTGGTTGTGGCTTATAGGCAAGGGCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nucleoside_tran

Protein Analysis

381

Amino Acids

41.96

Weight (kDa)

8.65

Isoelectric Point (pI)

27.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nucleoside_tran PF01733 90 - 375 2.7e-35 Nucleoside transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 434
AccBSI CCGCTC 1 cut(s) 540
AccIII TCCGGA 1 cut(s) 212
AciI CCGC 3 cut(s) 142, 538, 646
AclI AACGTT 1 cut(s) 678
AclWI GGATC 5 cut(s) 568, 623, 636, 766, 825
AcsI RAATTY 3 cut(s) 145, 329, 415
AcvI CACGTG 1 cut(s) 286
AfaI GTAC 5 cut(s) 178, 497, 775, 806, 938
AfiI CCNNNNNNNGG 1 cut(s) 544
AleI CACNNNNGTG 1 cut(s) 68
AluBI AGCT 4 cut(s) 206, 478, 517, 671
AluI AGCT 4 cut(s) 206, 478, 517, 671
Alw21I GWGCWC 1 cut(s) 1014
Alw26I GTCTC 2 cut(s) 300, 936
AlwI GGATC 5 cut(s) 568, 623, 636, 766, 825
AlwNI CAGNNNCTG 1 cut(s) 649
Ama87I CYCGRG 1 cut(s) 37
Aor13HI TCCGGA 1 cut(s) 212
AoxI GGCC 1 cut(s) 369
ApaI GGGCCC 1 cut(s) 373
ApeKI GCWGC 5 cut(s) 359, 478, 548, 587, 643
ApoI RAATTY 3 cut(s) 145, 329, 415
AspLEI GCGC 2 cut(s) 88, 435
AspS9I GGNCC 4 cut(s) 58, 369, 370, 1040
AsuC2I CCSGG 1 cut(s) 735
AvaI CYCGRG 1 cut(s) 37
AvaII GGWCC 2 cut(s) 58, 1040
BaeGI GKGCMC 1 cut(s) 373
BamHI GGATCC 1 cut(s) 628
BanII GRGCYC 1 cut(s) 373
BbrPI CACGTG 1 cut(s) 286
Bbv12I GWGCWC 1 cut(s) 1014
BbvI GCAGC 5 cut(s) 346, 465, 560, 574, 655
BccI CCATC 2 cut(s) 467, 874
BceAI ACGGC 1 cut(s) 64
BcgI CGANNNNNNTGC 2 cut(s) 622, 656
BclI TGATCA 1 cut(s) 957
BcnI CCSGG 1 cut(s) 735
BcoDI GTCTC 2 cut(s) 300, 936
BfaI CTAG 3 cut(s) 68, 135, 191
BfmI CTRYAG 1 cut(s) 1017
BisI GCNGC 6 cut(s) 360, 479, 549, 588, 644, 647
BlsI GCNGC 6 cut(s) 361, 480, 550, 589, 645, 648
BmcAI AGTACT 1 cut(s) 178
Bme1390I CCNGG 1 cut(s) 735
Bme18I GGWCC 2 cut(s) 58, 1040
BmeT110I CYCGRG 1 cut(s) 37
BmgT120I GGNCC 4 cut(s) 58, 369, 370, 1040
BmiI GGNNCC 6 cut(s) 59, 370, 371, 442, 630, 1041
BmrFI CCNGG 1 cut(s) 735
BmsI GCATC 6 cut(s) 268, 371, 560, 606, 610, 630
BplI GAGNNNNNCTC 2 cut(s) 1095, 1127
BpuEI CTTGAG 1 cut(s) 839
BpuMI CCSGG 1 cut(s) 735
BsaAI YACGTR 2 cut(s) 286, 869
BsaBI GATNNNNATC 1 cut(s) 742
BsaI GGTCTC 2 cut(s) 300, 936
BsaJI CCNNGG 3 cut(s) 543, 733, 946
BsaWI WCCGGW 3 cut(s) 212, 610, 1042
Bsc4I CCNNNNNNNGG 1 cut(s) 544
Bse1I ACTGG 3 cut(s) 792, 1074, 1121
Bse3DI GCAATG 1 cut(s) 807
Bse8I GATNNNNATC 1 cut(s) 742
BseAI TCCGGA 1 cut(s) 212
BseDI CCNNGG 3 cut(s) 543, 733, 946
BseGI GGATG 6 cut(s) 46, 209, 333, 597, 960, 968
BseJI GATNNNNATC 1 cut(s) 742
BseLI CCNNNNNNNGG 1 cut(s) 544
BseMI GCAATG 1 cut(s) 807
BseMII CTCAG 1 cut(s) 377
BseNI ACTGG 3 cut(s) 792, 1074, 1121
BseSI GKGCMC 1 cut(s) 373
BseXI GCAGC 5 cut(s) 346, 465, 560, 574, 655
BseYI CCCAGC 1 cut(s) 649
BshFI GGCC 1 cut(s) 371
BsiHKAI GWGCWC 1 cut(s) 1014
BsiHKCI CYCGRG 1 cut(s) 37
BsiSI CCGG 5 cut(s) 50, 213, 611, 735, 1043
BslFI GGGAC 1 cut(s) 1053
BslI CCNNNNNNNGG 1 cut(s) 544
BsmAI GTCTC 2 cut(s) 300, 936
BsmFI GGGAC 1 cut(s) 1053
BsnI GGCC 1 cut(s) 371
Bso31I GGTCTC 2 cut(s) 300, 936
BsoBI CYCGRG 1 cut(s) 37
Bsp120I GGGCCC 1 cut(s) 369
Bsp1286I GDGCHC 2 cut(s) 373, 1014
Bsp13I TCCGGA 1 cut(s) 212
Bsp1407I TGTACA 1 cut(s) 804
Bsp143I GATC 6 cut(s) 126, 560, 628, 758, 817, 957
BspACI CCGC 3 cut(s) 142, 538, 646
BspANI GGCC 1 cut(s) 371
BspCNI CTCAG 1 cut(s) 378
BspEI TCCGGA 1 cut(s) 212
BspHI TCATGA 1 cut(s) 318
BspLI GGNNCC 6 cut(s) 59, 370, 371, 442, 630, 1041
BspPI GGATC 5 cut(s) 568, 623, 636, 766, 825
BspTNI GGTCTC 2 cut(s) 300, 936
BsrBI CCGCTC 1 cut(s) 540
BsrDI GCAATG 1 cut(s) 807
BsrGI TGTACA 1 cut(s) 804
BsrI ACTGG 3 cut(s) 792, 1074, 1121
BssECI CCNNGG 3 cut(s) 543, 733, 946
BssMI GATC 6 cut(s) 126, 560, 628, 758, 817, 957
BssT1I CCWWGG 2 cut(s) 543, 946
Bst4CI ACNGT 3 cut(s) 571, 767, 1003
BstAUI TGTACA 1 cut(s) 804
BstBAI YACGTR 2 cut(s) 286, 869
BstDEI CTNAG 4 cut(s) 173, 386, 636, 844
BstF5I GGATG 6 cut(s) 46, 209, 333, 597, 960, 968
BstHHI GCGC 2 cut(s) 88, 435
BstKTI GATC 6 cut(s) 129, 563, 631, 761, 820, 960
BstMAI GTCTC 2 cut(s) 300, 936
BstMBI GATC 6 cut(s) 126, 560, 628, 758, 817, 957
BstMWI GCNNNNNNNGC 4 cut(s) 85, 368, 584, 849
BstSCI CCNGG 1 cut(s) 733
BstSFI CTRYAG 1 cut(s) 1017
BstSLI GKGCMC 1 cut(s) 373
BstV1I GCAGC 5 cut(s) 346, 465, 560, 574, 655
BstX2I RGATCY 4 cut(s) 560, 628, 758, 817
BstYI RGATCY 4 cut(s) 560, 628, 758, 817
BsuRI GGCC 1 cut(s) 371
BtsCI GGATG 6 cut(s) 46, 209, 333, 597, 960, 968
BtsI GCAGTG 1 cut(s) 927
BtsIMutI CAGTG 2 cut(s) 785, 927
CaiI CAGNNNCTG 1 cut(s) 649
CciI TCATGA 1 cut(s) 318
CfoI GCGC 2 cut(s) 88, 435
Cfr13I GGNCC 4 cut(s) 58, 369, 370, 1040
Csp6I GTAC 5 cut(s) 177, 496, 774, 805, 937
CviAII CATG 4 cut(s) 319, 777, 840, 961
CviQI GTAC 5 cut(s) 177, 496, 774, 805, 937
DdeI CTNAG 4 cut(s) 173, 386, 636, 844
DpnI GATC 6 cut(s) 128, 562, 630, 760, 819, 959
DpnII GATC 6 cut(s) 126, 560, 628, 758, 817, 957
Eco130I CCWWGG 2 cut(s) 543, 946
Eco24I GRGCYC 1 cut(s) 373
Eco31I GGTCTC 2 cut(s) 300, 936
Eco32I GATATC 1 cut(s) 44
Eco47I GGWCC 2 cut(s) 58, 1040
Eco72I CACGTG 1 cut(s) 286
Eco88I CYCGRG 1 cut(s) 37
EcoO109I RGGNCCY 3 cut(s) 58, 369, 370
EcoRI GAATTC 2 cut(s) 329, 415
EcoRV GATATC 1 cut(s) 44
EcoT14I CCWWGG 2 cut(s) 543, 946
EcoT38I GRGCYC 1 cut(s) 373
ErhI CCWWGG 2 cut(s) 543, 946
FaeI CATG 4 cut(s) 322, 780, 843, 964
FaqI GGGAC 1 cut(s) 1053
FatI CATG 4 cut(s) 318, 776, 839, 960
FbaI TGATCA 1 cut(s) 957
Fnu4HI GCNGC 6 cut(s) 360, 479, 549, 588, 644, 647
FokI GGATG 6 cut(s) 33, 196, 320, 584, 955, 967
FriOI GRGCYC 1 cut(s) 373
Fsp4HI GCNGC 6 cut(s) 360, 479, 549, 588, 644, 647
FspBI CTAG 3 cut(s) 68, 135, 191
FspI TGCGCA 1 cut(s) 434
GlaI GCGC 2 cut(s) 87, 434
GluI GCNGC 6 cut(s) 360, 479, 549, 588, 644, 647
GsaI CCCAGC 1 cut(s) 653
HaeIII GGCC 1 cut(s) 371
HapII CCGG 5 cut(s) 50, 213, 611, 735, 1043
HhaI GCGC 2 cut(s) 88, 435
Hin1II CATG 4 cut(s) 322, 780, 843, 964
Hin6I GCGC 2 cut(s) 86, 433
HinP1I GCGC 2 cut(s) 86, 433
HinfI GANTC 4 cut(s) 243, 738, 831, 863
HpaII CCGG 5 cut(s) 50, 213, 611, 735, 1043
Hpy188I TCNGA 5 cut(s) 242, 513, 556, 633, 748
Hpy188III TCNNGA 6 cut(s) 37, 213, 319, 381, 526, 601
HpyAV CCTTC 3 cut(s) 551, 608, 982
HpyCH4III ACNGT 3 cut(s) 571, 767, 1003
HpyCH4IV ACGT 3 cut(s) 285, 678, 868
HpyCH4V TGCA 8 cut(s) 275, 289, 362, 623, 643, 785, 800, 1100
HpyF10VI GCNNNNNNNGC 4 cut(s) 85, 368, 584, 849
HpyF3I CTNAG 4 cut(s) 173, 386, 636, 844
HpySE526I ACGT 3 cut(s) 285, 678, 868
Hsp92II CATG 4 cut(s) 322, 780, 843, 964
HspAI GCGC 2 cut(s) 86, 433
Kpn2I TCCGGA 1 cut(s) 212
Ksp22I TGATCA 1 cut(s) 957
Kzo9I GATC 6 cut(s) 126, 560, 628, 758, 817, 957
LmnI GCTCC 2 cut(s) 440, 545
Lsp1109I GCAGC 5 cut(s) 346, 465, 560, 574, 655
LweI GCATC 6 cut(s) 268, 371, 560, 606, 610, 630
MaeI CTAG 3 cut(s) 68, 135, 191
MaeII ACGT 3 cut(s) 285, 678, 868
MaeIII GTNAC 2 cut(s) 992, 1105
MalI GATC 6 cut(s) 128, 562, 630, 760, 819, 959
MbiI CCGCTC 1 cut(s) 540
MboI GATC 6 cut(s) 126, 560, 628, 758, 817, 957
MboII GAAGA 2 cut(s) 26, 761
MfeI CAATTG 2 cut(s) 662, 690
MflI RGATCY 4 cut(s) 560, 628, 758, 817
MhlI GDGCHC 2 cut(s) 373, 1014
MluCI AATT 7 cut(s) 145, 329, 415, 662, 690, 726, 888
MmeI TCCRAC 2 cut(s) 177, 656
MnlI CCTC 8 cut(s) 48, 71, 215, 287, 381, 388, 619, 863
MroI TCCGGA 1 cut(s) 212
MseI TTAA 2 cut(s) 983, 998
MslI CAYNNNNRTG 2 cut(s) 68, 871
MspA1I CMGCKG 1 cut(s) 646
MspI CCGG 5 cut(s) 50, 213, 611, 735, 1043
MspR9I CCNGG 1 cut(s) 735
MunI CAATTG 2 cut(s) 662, 690
MwoI GCNNNNNNNGC 4 cut(s) 85, 368, 584, 849
NciI CCSGG 1 cut(s) 735
NdeII GATC 6 cut(s) 126, 560, 628, 758, 817, 957
NlaIII CATG 4 cut(s) 322, 780, 843, 964
NlaIV GGNNCC 6 cut(s) 59, 370, 371, 442, 630, 1041
NsbI TGCGCA 1 cut(s) 434
OliI CACNNNNGTG 1 cut(s) 68
PagI TCATGA 1 cut(s) 318
PfeI GAWTC 4 cut(s) 243, 738, 831, 863
PflFI GACNNNGTC 1 cut(s) 721
PkrI GCNGC 6 cut(s) 361, 480, 550, 589, 645, 648
PmaCI CACGTG 1 cut(s) 286
PmlI CACGTG 1 cut(s) 286
Ppu21I YACGTR 2 cut(s) 286, 869
PpuMI RGGWCCY 1 cut(s) 58
Psp1406I AACGTT 1 cut(s) 678
Psp5II RGGWCCY 1 cut(s) 58
PspCI CACGTG 1 cut(s) 286
PspFI CCCAGC 1 cut(s) 649
PspN4I GGNNCC 6 cut(s) 59, 370, 371, 442, 630, 1041
PspOMI GGGCCC 1 cut(s) 369
PspPI GGNCC 4 cut(s) 58, 369, 370, 1040
PspPPI RGGWCCY 1 cut(s) 58
PstNI CAGNNNCTG 1 cut(s) 649
PsuI RGATCY 4 cut(s) 560, 628, 758, 817
PsyI GACNNNGTC 1 cut(s) 721
RsaI GTAC 5 cut(s) 178, 497, 775, 806, 938
RsaNI GTAC 5 cut(s) 177, 496, 774, 805, 937
RseI CAYNNNNRTG 2 cut(s) 68, 871
SaqAI TTAA 2 cut(s) 983, 998
SatI GCNGC 6 cut(s) 360, 479, 549, 588, 644, 647
Sau3AI GATC 6 cut(s) 126, 560, 628, 758, 817, 957
Sau96I GGNCC 4 cut(s) 58, 369, 370, 1040
ScaI AGTACT 1 cut(s) 178
ScrFI CCNGG 1 cut(s) 735
SduI GDGCHC 2 cut(s) 373, 1014
SfaNI GCATC 6 cut(s) 268, 371, 560, 606, 610, 630
SfcI CTRYAG 1 cut(s) 1017
SinI GGWCC 2 cut(s) 58, 1040
SmiMI CAYNNNNRTG 2 cut(s) 68, 871
SmlI CTYRAG 1 cut(s) 854
SmoI CTYRAG 1 cut(s) 854
Sse9I AATT 7 cut(s) 145, 329, 415, 662, 690, 726, 888
SsiI CCGC 3 cut(s) 142, 538, 646
SspI AATATT 1 cut(s) 408
SspMI CTAG 3 cut(s) 68, 135, 191
StyD4I CCNGG 1 cut(s) 733
StyI CCWWGG 2 cut(s) 543, 946
TaaI ACNGT 3 cut(s) 571, 767, 1003
TaiI ACGT 3 cut(s) 288, 681, 871
TaqI TCGA 2 cut(s) 12, 1113
TasI AATT 7 cut(s) 145, 329, 415, 662, 690, 726, 888
TatI WGTACW 2 cut(s) 176, 804
TauI GCSGC 1 cut(s) 649
TfiI GAWTC 4 cut(s) 243, 738, 831, 863
Tru1I TTAA 2 cut(s) 983, 998
Tru9I TTAA 2 cut(s) 983, 998
TscAI CASTG 2 cut(s) 792, 934
TseI GCWGC 5 cut(s) 359, 478, 548, 587, 643
TspDTI ATGAA 4 cut(s) 132, 307, 322, 335
TspGWI ACGGA 1 cut(s) 954
TspRI CASTG 2 cut(s) 792, 934
Tth111I GACNNNGTC 1 cut(s) 721
VpaK11BI GGWCC 2 cut(s) 58, 1040
XapI RAATTY 3 cut(s) 145, 329, 415
XspI CTAG 3 cut(s) 68, 135, 191
ZrmI AGTACT 1 cut(s) 178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.