Rroxscaffold_1G00045890

Leucine-rich repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0003583
Physical Location & Seq
Reverse (-)
65042168 .. 65053255
11088 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00045890.1

Sequence Viewer

Length: 2946 bp
ATGCACTTGATGAGTACATTTCAACTTTTTCTCTCACCCATATTTCCTATTCATAGACACATATGGTTTACAATTCGCAAGTCTTTGAACAAATACTTATGTTATTACCAATGGAGTTTTTGCTTCTTGGGAAGTAGAAGATCTAAGCTTGGAACCTCATTCAACATTGTTTTTGGTCCAAAGAGATCATCAGCTCAAAATAATGACACCATTCAGATCCAAAGACCAGTGCAAAACTTGTTTGTAGAAGAAGAGTTGAATCTGCTTTGGACTATAGATGAATTCAACCAAGATGAAGATGCCATTGAAGTCTTGTGTGGTTGCACTGACAAAAAATATGGTGACACTACTGGGACGCTTACGATTTTCTCGACCGGGCAGTTTATGATCACCTGTAAATGCCCTCTTAAGCATACCAAAGAGGACAAAGAGAAAAAGAATACTGAGTATACTGACCCGAAAAGAATGACACCCAAAGAATTTGAGTGTCATAAGAAGAGTGTGTCAGTCGAAAATGCTAAAGAAGTTGCCCTCGTGCCCCAACATGCAAGGGATGCACCTCTTGTGTGTGTTTGGGTTGTAGCATGTGCCCCTTCAAGGACTGTGATTGCCGGACCTGTGTTGACTATATTCAGAATTTCCAATTCTCTCTATGCGATCATTGAGGAGGCTGGTGAGGATGGAGAGAGGAGGCGAGTCATTATCAAATGGATGCAACCTCCTAGTGGTAGGATGAAACGTAGTGTCGCCAAGTATAGTTTTGGTCGACAACATAGTGAGAAAACAGCTCCCGCTCACTACATTTCCATGGATCGGGTCATCAAAGCCGCCAGAGCCTCCGGTTCTCTCAACCTTTCAAATCGCTCTCTCAGGTTCGTGCCCGATGAGGTATACAAAAGCGTGAATGCGGTTGGTGAAGACGAGAAGTGGTGGGAGGCTGTGGAGCTACACAAGCTGATTCTAGCTCATAATGAAATTGAATTGCTCAAAGATGAGCTGAGGAATTTGCCTCTACTGACTGTGTTGAATGTCAGCCACAATAAACTTTCCGAGCTTCCGGCGGCAATCGGAGAGCTTACTATGCTGAAATCGTTAGACGTGTCATTCAACTCAATTCTAGAGCTGCCTGAGGAAATTGGATCAGCAACTGCTCTTGTCAATGCATTCCTCTTGTGTCTTTGTTGTTTCTTTGTACTTGAGTACGATAAAGGACGACTTGAAATGGAGGCTTTGAGTGCAGTACCGTTTATTATTGGTTCATTTACTATCCAATTAGGTTCTGCTTGTATCACTTCTCACTATGTCCTCCCCTGGCCTTTTAGTTCCATAGGTCTAGAGGAAGCGGCCTTTACTTATCAATACTTGCCCCCACTACCTGTTAAAGTTTTGGAGTTACTTGTTAAAGGATGCCTGCCTAATTATCTTGCACCTATTTTCCTGGTTGTGCTTAAGGACCTCCCAAACTCACTTGGGAGATGCTCAGATCTATCAGATTTCAAGGCATCAAACAATGTTATCATCAGCTTGCCAGAAGATCTAGCAAACTGCTCAAAATTGATGAAATTGGATGTGGAGGGAAACAAGTTAACAAACCTATCTGAGAAGTTGATTGGATCGTGGACTTTGCTTACAGAACTCAATGCATCAAAAAATCTGCTGAGTGGAATACCAGAGAATATTGGAAGCCTTTCTCGTCTTATTCGTCTTGACCTTCACCAGAACAAAATTTCAGCGATCCCAGTTTCAATAAGGGGTTGTTGTTCCCTTGCGGAGATCCACATGGGGTACCAACTTTTACATGGAATAATGCACTCTCTACTTTACCATCAGAGATGGGGAACTTTCTTGCCTAGGAACTCTAGATCTGCAATCAAACCAGACTATAGTAACAATCCCCTCAGTGCCATAACAAGCACTCGGCCTTCCCCCTCCACTCAGTTTAGGAGGTATGAACCCAACCCATCAATTGGGAGCTACTTTGACCTTTTGAAGGAGTATCCAGTGGAGGCATGTAAATTGCGTCTTTCATTATTGAATCTTTCAAACAATTCATTGTCTGGATTGCCCCCTGAATTGGGCAAGATGACTACCTTGCGAAGACTTTTACTTACCGGAAACCCTATACGAACTCTACGAAGTACATTGGTGTCTGGACCAACACCTACTTTATTGAAGTATCTGCGAAGTAGGCTTTCTCAGAATGAAGATGCTGAAGCTTCAACTACTACAAAAGAGGATGTGATTGCCATGGCAGCTCGATTGTCTATTGCTTCAAAGGAACTTTCTATGGAAGGGCTGGGTTTGAGTTCTGTCCCATCAGAAGTATGGGAATCGAGTGAGGTCATAAAAGTCGATCTAACTAGGAATTCCATTGAAGAGCTCCCAGTTGAACTTTCTTCATGTACCCACCTCCAGACACTAATCTTATCCAGAAACAAGATTAAAGAGTGGCCAGGTGCAATTTTAAGCTCGCTTCGTAATCTTTTGTGTTTGAAGCTGGACAGTAATCCACTAAGACAGATACCATCAGATGGATTCCAAGCAACCCCCATGCTTCAGATTCTGGATCTAAGTGGTAATGCAGCTTCGTTACCAGAACACCCTGTATTTTCTAGTGTACCGCATCTGCTAGAGCTTTACCTGAGACGAATGCAGCTACGCGAAGTCCCATCAGATATCTTGAGTTTGCAGCAACTGCGGATCCTAGACCTCAGCCAAAATTCCCTACAGTCAGTTCCAGTGGAGTTCAAAAATTTTACTTCACTGACTGAGCTAGGCCTATCTGACAACAACATATCAACACTTCCTCCAGAATTGGGTATGCTTGAACCCAGCTTACAGGCCTTAAGACTCGACGGAAATCCATTAAGAAGCATCCGGCGGACGGTTTTAGATAGAGGAACCAAAGCTGTTCTGCAATATCTCAAGGACAAAATCGTGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box LRR_1 LRR_5 LRR_8

Protein Analysis

981

Amino Acids

109.94

Weight (kDa)

8.09

Isoelectric Point (pI)

54.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAND_ULT1 PF23292 92 - 176 2.2e-14 ULTRAPETALA1 SAND domain
LRR_8 PF13855 315 - 372 3.8e-07 Leucine rich repeat
LRR_14 PF23598 315 - 385 1.4e-06 Leucine-rich repeat region
LRR_14 PF23598 786 - 856 5e-06 Leucine-rich repeat region
LRR_8 PF13855 803 - 860 5.1e-09 Leucine rich repeat
LRR_14 PF23598 850 - 951 1.4e-06 Leucine-rich repeat region
LRR_8 PF13855 874 - 932 4.9e-08 Leucine rich repeat
LRR_8 PF13855 898 - 956 2.6e-09 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1785
AccB1I GGYRCC 1 cut(s) 1785
AccB7I CCANNNNNTGG 2 cut(s) 1967, 2531
AccBSI CCGCTC 1 cut(s) 794
AccI GTMKAC 3 cut(s) 449, 766, 891
AccII CGCG 1 cut(s) 2661
AciI CCGC 9 cut(s) 792, 828, 908, 1061, 1343, 1769, 2621, 2698, 2881
AclWI GGATC 9 cut(s) 211, 819, 1147, 1621, 1729, 1768, 2574, 2695, 2708
AcoI YGGCCR 1 cut(s) 2450
AcsI RAATTY 8 cut(s) 281, 479, 636, 1003, 1725, 2365, 2719, 2752
AcuI CTGAAG 2 cut(s) 2232, 2540
AfaI GTAC 8 cut(s) 16, 1194, 1202, 1242, 1787, 2140, 2404, 2619
AflII CTTAAG 3 cut(s) 407, 1448, 2845
AflIII ACRYGT 1 cut(s) 1098
AjiI CACGTC 1 cut(s) 1099
AjnI CCWGG 3 cut(s) 1310, 1437, 2452
Alw21I GWGCWC 1 cut(s) 2382
Alw26I GTCTC 1 cut(s) 2638
AlwI GGATC 9 cut(s) 211, 819, 1147, 1621, 1729, 1768, 2574, 2695, 2708
AlwNI CAGNNNCTG 3 cut(s) 1148, 2563, 2695
AoxI GGCC 6 cut(s) 1313, 1344, 1919, 2450, 2776, 2841
ApeKI GCWGC 5 cut(s) 1123, 2252, 2582, 2653, 2689
ApoI RAATTY 8 cut(s) 281, 479, 636, 1003, 1725, 2365, 2719, 2752
Asp700I GAANNNNTTC 1 cut(s) 1687
Asp718I GGTACC 1 cut(s) 1785
AspA2I CCTAGG 1 cut(s) 1850
AspS9I GGNCC 4 cut(s) 176, 614, 1453, 2153
AsuC2I CCSGG 1 cut(s) 376
AsuHPI GGTGA 6 cut(s) 27, 353, 382, 686, 926, 1706
AvaII GGWCC 4 cut(s) 176, 614, 1453, 2153
AvrII CCTAGG 1 cut(s) 1850
AxyI CCTNAGG 1 cut(s) 1128
BaeGI GKGCMC 3 cut(s) 540, 592, 882
BalI TGGCCA 1 cut(s) 2452
BamHI GGATCC 1 cut(s) 2700
BanI GGYRCC 1 cut(s) 1785
BanII GRGCYC 1 cut(s) 2382
BarI GAAGNNNNNNTAC 2 cut(s) 2569, 2601
BauI CACGAG 1 cut(s) 533
BbsI GAAGAC 2 cut(s) 924, 2104
Bbv12I GWGCWC 1 cut(s) 2382
BbvCI CCTCAGC 2 cut(s) 998, 2711
BbvI GCAGC 5 cut(s) 1110, 2264, 2594, 2665, 2701
BccI CCATC 8 cut(s) 674, 1827, 1833, 1969, 2323, 2525, 2533, 2677
BciT130I CCWGG 3 cut(s) 1312, 1439, 2454
BciVI GTATCC 1 cut(s) 2007
BclI TGATCA 1 cut(s) 387
BcnI CCSGG 1 cut(s) 376
BcoDI GTCTC 1 cut(s) 2638
BfmI CTRYAG 3 cut(s) 273, 1882, 2726
BfrI CTTAAG 3 cut(s) 407, 1448, 2845
BfuI GTATCC 1 cut(s) 2007
BglII AGATCT 4 cut(s) 140, 1483, 1534, 1862
BisI GCNGC 8 cut(s) 828, 1062, 1124, 1344, 2253, 2583, 2654, 2690
BlnI CCTAGG 1 cut(s) 1850
BlsI GCNGC 8 cut(s) 829, 1063, 1125, 1345, 2254, 2584, 2655, 2691
Bme1390I CCNGG 4 cut(s) 376, 1312, 1439, 2454
Bme18I GGWCC 4 cut(s) 176, 614, 1453, 2153
BmgBI CACGTC 1 cut(s) 1099
BmgT120I GGNCC 4 cut(s) 176, 614, 1453, 2153
BmiI GGNNCC 4 cut(s) 154, 1787, 2702, 2902
BmrFI CCNGG 4 cut(s) 376, 1312, 1439, 2454
BmrI ACTGGG 3 cut(s) 360, 1733, 2378
BmuI ACTGGG 3 cut(s) 360, 1733, 2378
BpiI GAAGAC 2 cut(s) 924, 2104
BpmI CTGGAG 2 cut(s) 2396, 2793
Bpu10I CCTNAGC 2 cut(s) 998, 2711
BpuEI CTTGAG 3 cut(s) 1217, 2701, 2909
BpuMI CCSGG 1 cut(s) 376
BsaJI CCNNGG 4 cut(s) 807, 1310, 1850, 2247
BsaWI WCCGGW 2 cut(s) 839, 2111
BsaXI ACNNNNNCTCC 2 cut(s) 2791, 2821
Bse1I ACTGG 6 cut(s) 227, 355, 1739, 2000, 2384, 2738
Bse21I CCTNAGG 1 cut(s) 1128
BseBI CCWGG 3 cut(s) 1312, 1439, 2454
BseDI CCNNGG 4 cut(s) 807, 1310, 1850, 2247
BseGI GGATG 8 cut(s) 559, 685, 717, 738, 1412, 1573, 2242, 2874
BseNI ACTGG 6 cut(s) 227, 355, 1739, 2000, 2384, 2738
BseRI GAGGAG 2 cut(s) 680, 703
BseSI GKGCMC 3 cut(s) 540, 592, 882
BseXI GCAGC 5 cut(s) 1110, 2264, 2594, 2665, 2701
BseYI CCCAGC 2 cut(s) 2296, 2831
BsgI GTGCAG 1 cut(s) 1257
Bsh1236I CGCG 1 cut(s) 2661
Bsh1285I CGRYCG 1 cut(s) 375
BshFI GGCC 6 cut(s) 1315, 1346, 1921, 2452, 2778, 2843
BshNI GGYRCC 1 cut(s) 1785
BsiEI CGRYCG 1 cut(s) 375
BsiHKAI GWGCWC 1 cut(s) 2382
BsiSI CCGG 6 cut(s) 375, 612, 840, 1058, 2112, 2878
BslFI GGGAC 3 cut(s) 367, 2297, 2651
BsmAI GTCTC 1 cut(s) 2638
BsmBI CGTCTC 1 cut(s) 2638
BsmFI GGGAC 3 cut(s) 367, 2297, 2651
BsmI GAATGC 3 cut(s) 910, 1163, 2655
BsnI GGCC 6 cut(s) 1315, 1346, 1921, 2452, 2778, 2843
Bsp1286I GDGCHC 4 cut(s) 540, 592, 882, 2382
Bsp19I CCATGG 2 cut(s) 807, 2247
BspACI CCGC 9 cut(s) 792, 828, 908, 1061, 1343, 1769, 2621, 2698, 2881
BspANI GGCC 6 cut(s) 1315, 1346, 1921, 2452, 2778, 2843
BspFNI CGCG 1 cut(s) 2661
BspLI GGNNCC 4 cut(s) 154, 1787, 2702, 2902
BspPI GGATC 9 cut(s) 211, 819, 1147, 1621, 1729, 1768, 2574, 2695, 2708
BspQI GCTCTTC 1 cut(s) 2370
BspT107I GGYRCC 1 cut(s) 1785
BspTI CTTAAG 3 cut(s) 407, 1448, 2845
BsrBI CCGCTC 1 cut(s) 794
BsrI ACTGG 6 cut(s) 227, 355, 1739, 2000, 2384, 2738
BssECI CCNNGG 4 cut(s) 807, 1310, 1850, 2247
BssNAI GTATAC 2 cut(s) 450, 892
BssSI CACGAG 1 cut(s) 533
BssT1I CCWWGG 3 cut(s) 807, 1850, 2247
Bst1107I GTATAC 2 cut(s) 450, 892
Bst2BI CACGAG 1 cut(s) 533
Bst2UI CCWGG 3 cut(s) 1312, 1439, 2454
Bst4CI ACNGT 6 cut(s) 604, 1021, 1245, 2504, 2730, 2887
Bst6I CTCTTC 3 cut(s) 246, 491, 2370
BstAFI CTTAAG 3 cut(s) 407, 1448, 2845
BstAPI GCANNNNNTGC 2 cut(s) 554, 2695
BstC8I GCNNGC 3 cut(s) 1412, 1526, 2471
BstDSI CCRYGG 2 cut(s) 807, 2247
BstENI CCTNNNNNAGG 1 cut(s) 1988
BstF5I GGATG 8 cut(s) 559, 685, 717, 738, 1412, 1573, 2242, 2874
BstFNI CGCG 1 cut(s) 2661
BstMAI GTCTC 1 cut(s) 2638
BstMCI CGRYCG 1 cut(s) 375
BstMWI GCNNNNNNNGC 8 cut(s) 554, 833, 952, 1081, 1235, 2188, 2252, 2695
BstNI CCWGG 3 cut(s) 1312, 1439, 2454
BstNSI RCATGY 3 cut(s) 548, 588, 2013
BstSCI CCNGG 4 cut(s) 374, 1310, 1437, 2452
BstSFI CTRYAG 3 cut(s) 273, 1882, 2726
BstSLI GKGCMC 3 cut(s) 540, 592, 882
BstUI CGCG 1 cut(s) 2661
BstV1I GCAGC 5 cut(s) 1110, 2264, 2594, 2665, 2701
BstV2I GAAGAC 2 cut(s) 924, 2104
BstX2I RGATCY 8 cut(s) 140, 216, 1483, 1534, 1773, 1862, 2566, 2700
BstYI RGATCY 8 cut(s) 140, 216, 1483, 1534, 1773, 1862, 2566, 2700
BstZ17I GTATAC 2 cut(s) 450, 892
Bsu36I CCTNAGG 1 cut(s) 1128
BsuI GTATCC 1 cut(s) 2007
BsuRI GGCC 6 cut(s) 1315, 1346, 1921, 2452, 2778, 2843
BtgI CCRYGG 2 cut(s) 807, 2247
BtrI CACGTC 1 cut(s) 1099
BtsCI GGATG 8 cut(s) 559, 685, 717, 738, 1412, 1573, 2242, 2874
BtsIMutI CAGTG 6 cut(s) 234, 324, 1906, 2007, 2745, 2762
Cac8I GCNNGC 3 cut(s) 1412, 1526, 2471
CaiI CAGNNNCTG 3 cut(s) 1148, 2563, 2695
Cfr13I GGNCC 4 cut(s) 176, 614, 1453, 2153
CseI GACGC 2 cut(s) 364, 2009
Csp6I GTAC 8 cut(s) 15, 1193, 1201, 1241, 1786, 2139, 2403, 2618
CviAII CATG 9 cut(s) 545, 585, 808, 1780, 1799, 2010, 2248, 2400, 2551
CviQI GTAC 8 cut(s) 15, 1193, 1201, 1241, 1786, 2139, 2403, 2618
EaeI YGGCCR 1 cut(s) 2450
Eam1104I CTCTTC 3 cut(s) 246, 491, 2370
EarI CTCTTC 3 cut(s) 246, 491, 2370
EciI GGCGGA 1 cut(s) 2896
Ecl136II GAGCTC 1 cut(s) 2380
Eco130I CCWWGG 3 cut(s) 807, 1850, 2247
Eco147I AGGCCT 2 cut(s) 2778, 2843
Eco24I GRGCYC 1 cut(s) 2382
Eco32I GATATC 1 cut(s) 2677
Eco47I GGWCC 4 cut(s) 176, 614, 1453, 2153
Eco53kI GAGCTC 1 cut(s) 2380
Eco57I CTGAAG 2 cut(s) 2232, 2540
Eco81I CCTNAGG 1 cut(s) 1128
EcoICRI GAGCTC 1 cut(s) 2380
EcoNI CCTNNNNNAGG 1 cut(s) 1988
EcoO109I RGGNCCY 1 cut(s) 1453
EcoRI GAATTC 2 cut(s) 281, 2365
EcoRII CCWGG 3 cut(s) 1310, 1437, 2452
EcoRV GATATC 1 cut(s) 2677
EcoT14I CCWWGG 3 cut(s) 807, 1850, 2247
EcoT22I ATGCAT 2 cut(s) 1165, 1645
EcoT38I GRGCYC 1 cut(s) 2382
ErhI CCWWGG 3 cut(s) 807, 1850, 2247
Esp3I CGTCTC 1 cut(s) 2638
FaeI CATG 9 cut(s) 548, 588, 811, 1783, 1802, 2013, 2251, 2403, 2554
FalI AAGNNNNNCTT 2 cut(s) 1200, 1232
FaqI GGGAC 3 cut(s) 367, 2297, 2651
FatI CATG 9 cut(s) 544, 584, 807, 1779, 1798, 2009, 2247, 2399, 2550
FauI CCCGC 1 cut(s) 799
FauNDI CATATG 1 cut(s) 62
FbaI TGATCA 1 cut(s) 387
FblI GTMKAC 3 cut(s) 449, 766, 891
Fnu4HI GCNGC 8 cut(s) 828, 1062, 1124, 1344, 2253, 2583, 2654, 2690
FokI GGATG 8 cut(s) 566, 692, 724, 745, 1419, 1580, 2249, 2861
FriOI GRGCYC 1 cut(s) 2382
Fsp4HI GCNGC 8 cut(s) 828, 1062, 1124, 1344, 2253, 2583, 2654, 2690
GluI GCNGC 8 cut(s) 828, 1062, 1124, 1344, 2253, 2583, 2654, 2690
GsaI CCCAGC 2 cut(s) 2300, 2835
GsuI CTGGAG 2 cut(s) 2396, 2793
HaeIII GGCC 6 cut(s) 1315, 1346, 1921, 2452, 2778, 2843
HapII CCGG 6 cut(s) 375, 612, 840, 1058, 2112, 2878
HgaI GACGC 2 cut(s) 364, 2009
Hin1II CATG 9 cut(s) 548, 588, 811, 1783, 1802, 2013, 2251, 2403, 2554
HincII GTYRAC 3 cut(s) 624, 767, 1587
HindII GTYRAC 3 cut(s) 624, 767, 1587
HindIII AAGCTT 2 cut(s) 146, 2214
HinfI GANTC 8 cut(s) 259, 696, 958, 2035, 2330, 2535, 2560, 2850
HpaI GTTAAC 1 cut(s) 1587
HpaII CCGG 6 cut(s) 375, 612, 840, 1058, 2112, 2878
HphI GGTGA 6 cut(s) 27, 353, 382, 686, 926, 1706
Hpy166II GTNNAC 8 cut(s) 69, 450, 624, 767, 892, 1587, 1620, 2618
Hpy8I GTNNAC 8 cut(s) 69, 450, 624, 767, 892, 1587, 1620, 2618
Hpy99I CGWCG 1 cut(s) 2858
HpyAV CCTTC 5 cut(s) 603, 1721, 1932, 1984, 2285
HpyCH4III ACNGT 6 cut(s) 604, 1021, 1245, 2504, 2730, 2887
HpyCH4IV ACGT 2 cut(s) 739, 1098
HpyF10VI GCNNNNNNNGC 8 cut(s) 554, 833, 952, 1081, 1235, 2188, 2252, 2695
HpySE526I ACGT 2 cut(s) 739, 1098
Hsp92II CATG 9 cut(s) 548, 588, 811, 1783, 1802, 2013, 2251, 2403, 2554
KpnI GGTACC 1 cut(s) 1789
Ksp22I TGATCA 1 cut(s) 387
KspAI GTTAAC 1 cut(s) 1587
LguI GCTCTTC 1 cut(s) 2370
LmnI GCTCC 4 cut(s) 793, 943, 1971, 2385
Lsp1109I GCAGC 5 cut(s) 1110, 2264, 2594, 2665, 2701
MaeII ACGT 2 cut(s) 739, 1098
MaeIII GTNAC 4 cut(s) 341, 1392, 1886, 2589
MbiI CCGCTC 1 cut(s) 794
MfeI CAATTG 1 cut(s) 1965
MflI RGATCY 8 cut(s) 140, 216, 1483, 1534, 1773, 1862, 2566, 2700
MhlI GDGCHC 4 cut(s) 540, 592, 882, 2382
MlsI TGGCCA 1 cut(s) 2452
MluNI TGGCCA 1 cut(s) 2452
MlyI GAGTC 2 cut(s) 705, 2844
Mox20I TGGCCA 1 cut(s) 2452
Mph1103I ATGCAT 2 cut(s) 1165, 1645
MroXI GAANNNNTTC 1 cut(s) 1687
MscI TGGCCA 1 cut(s) 2452
MseI TTAA 9 cut(s) 408, 1380, 1401, 1449, 1586, 2442, 2465, 2846, 2867
MslI CAYNNNNRTG 1 cut(s) 806
Msp20I TGGCCA 1 cut(s) 2452
MspCI CTTAAG 3 cut(s) 407, 1448, 2845
MspI CCGG 6 cut(s) 375, 612, 840, 1058, 2112, 2878
MspR9I CCNGG 4 cut(s) 376, 1312, 1439, 2454
MunI CAATTG 1 cut(s) 1965
Mva1269I GAATGC 3 cut(s) 910, 1163, 2655
MvaI CCWGG 3 cut(s) 1312, 1439, 2454
MvnI CGCG 1 cut(s) 2661
MwoI GCNNNNNNNGC 8 cut(s) 554, 833, 952, 1081, 1235, 2188, 2252, 2695
NciI CCSGG 1 cut(s) 376
NcoI CCATGG 2 cut(s) 807, 2247
NdeI CATATG 1 cut(s) 62
NlaIII CATG 9 cut(s) 548, 588, 811, 1783, 1802, 2013, 2251, 2403, 2554
NlaIV GGNNCC 4 cut(s) 154, 1787, 2702, 2902
NmeAIII GCCGAG 1 cut(s) 1897
NmuCI GTSAC 1 cut(s) 341
NsiI ATGCAT 2 cut(s) 1165, 1645
NspI RCATGY 3 cut(s) 548, 588, 2013
PceI AGGCCT 2 cut(s) 2778, 2843
PciSI GCTCTTC 1 cut(s) 2370
PcsI WCGNNNNNNNCGW 3 cut(s) 368, 1699, 2131
PctI GAATGC 3 cut(s) 910, 1163, 2655
PdmI GAANNNNTTC 1 cut(s) 1687
PfeI GAWTC 6 cut(s) 259, 958, 2035, 2330, 2535, 2560
PflMI CCANNNNNTGG 2 cut(s) 1967, 2531
PkrI GCNGC 8 cut(s) 829, 1063, 1125, 1345, 2254, 2584, 2655, 2691
PleI GAGTC 2 cut(s) 704, 2844
PpsI GAGTC 2 cut(s) 704, 2844
PpuMI RGGWCCY 1 cut(s) 1453
Psp124BI GAGCTC 1 cut(s) 2382
Psp5II RGGWCCY 1 cut(s) 1453
Psp6I CCWGG 3 cut(s) 1310, 1437, 2452
PspFI CCCAGC 2 cut(s) 2296, 2831
PspGI CCWGG 3 cut(s) 1310, 1437, 2452
PspN4I GGNNCC 4 cut(s) 154, 1787, 2702, 2902
PspPI GGNCC 4 cut(s) 176, 614, 1453, 2153
PspPPI RGGWCCY 1 cut(s) 1453
PsrI GAACNNNNNNTAC 2 cut(s) 2820, 2852
PstNI CAGNNNCTG 3 cut(s) 1148, 2563, 2695
PsuI RGATCY 8 cut(s) 140, 216, 1483, 1534, 1773, 1862, 2566, 2700
RsaI GTAC 8 cut(s) 16, 1194, 1202, 1242, 1787, 2140, 2404, 2619
RsaNI GTAC 8 cut(s) 15, 1193, 1201, 1241, 1786, 2139, 2403, 2618
RseI CAYNNNNRTG 1 cut(s) 806
SacI GAGCTC 1 cut(s) 2382
SalI GTCGAC 1 cut(s) 765
SapI GCTCTTC 1 cut(s) 2370
SaqAI TTAA 9 cut(s) 408, 1380, 1401, 1449, 1586, 2442, 2465, 2846, 2867
SatI GCNGC 8 cut(s) 828, 1062, 1124, 1344, 2253, 2583, 2654, 2690
Sau96I GGNCC 4 cut(s) 176, 614, 1453, 2153
SchI GAGTC 2 cut(s) 705, 2844
ScrFI CCNGG 4 cut(s) 376, 1312, 1439, 2454
SduI GDGCHC 4 cut(s) 540, 592, 882, 2382
SfcI CTRYAG 3 cut(s) 273, 1882, 2726
SinI GGWCC 4 cut(s) 176, 614, 1453, 2153
SmiMI CAYNNNNRTG 1 cut(s) 806
SmlI CTYRAG 6 cut(s) 407, 1196, 1448, 2680, 2845, 2924
SmoI CTYRAG 6 cut(s) 407, 1196, 1448, 2680, 2845, 2924
SseBI AGGCCT 2 cut(s) 2778, 2843
SsiI CCGC 9 cut(s) 792, 828, 908, 1061, 1343, 1769, 2621, 2698, 2881
SspI AATATT 1 cut(s) 1678
SstI GAGCTC 1 cut(s) 2382
StuI AGGCCT 2 cut(s) 2778, 2843
StyD4I CCNGG 4 cut(s) 374, 1310, 1437, 2452
StyI CCWWGG 3 cut(s) 807, 1850, 2247
TaaI ACNGT 6 cut(s) 604, 1021, 1245, 2504, 2730, 2887
TaiI ACGT 2 cut(s) 742, 1101
TaqI TCGA 7 cut(s) 371, 510, 766, 2257, 2333, 2352, 2853
TatI WGTACW 3 cut(s) 14, 1192, 2138
TauI GCSGC 3 cut(s) 830, 1064, 1346
TfiI GAWTC 6 cut(s) 259, 958, 2035, 2330, 2535, 2560
Tru1I TTAA 9 cut(s) 408, 1380, 1401, 1449, 1586, 2442, 2465, 2846, 2867
Tru9I TTAA 9 cut(s) 408, 1380, 1401, 1449, 1586, 2442, 2465, 2846, 2867
TscAI CASTG 6 cut(s) 234, 331, 1906, 2007, 2745, 2769
TseFI GTSAC 1 cut(s) 341
TseI GCWGC 5 cut(s) 1123, 2252, 2582, 2653, 2689
Tsp45I GTSAC 1 cut(s) 341
TspGWI ACGGA 1 cut(s) 2871
TspRI CASTG 6 cut(s) 234, 331, 1906, 2007, 2745, 2769
Van91I CCANNNNNTGG 2 cut(s) 1967, 2531
Vha464I CTTAAG 3 cut(s) 407, 1448, 2845
VpaK11BI GGWCC 4 cut(s) 176, 614, 1453, 2153
XagI CCTNNNNNAGG 1 cut(s) 1988
XapI RAATTY 8 cut(s) 281, 479, 636, 1003, 1725, 2365, 2719, 2752
XbaI TCTAGA 3 cut(s) 1117, 1333, 1859
XceI RCATGY 3 cut(s) 548, 588, 2013
XcmI CCANNNNNNNNNTGG 2 cut(s) 1796, 2322
XmaJI CCTAGG 1 cut(s) 1850
XmiI GTMKAC 3 cut(s) 449, 766, 891
XmnI GAANNNNTTC 1 cut(s) 1687
Zsp2I ATGCAT 2 cut(s) 1165, 1645
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.