Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001130

Physical Location & Seq

Genomic Coordinates Reverse (-)

52686798 .. 52691819

Gene Structure 5022 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00120460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGGATAGGCGGAGTCGGCTGTGGCAAAGGAAATCATCAGACAAGAGTTCTGGTGAGACTGAGAGTTCGGGATCGATATCTTCTCATTCTGAAAGATTTTCTGATGATCAGGTAGCATTCCCAACTCATAGCATTCAGTCGCTGGAAGTCACTTCTAAAGCTCTACGCAGTGATGAAGAACTTAATGAAAGTGTTGGGACTTTGAAGGAGAAACTATCAGCTGCTCTTCTTGACTGTAATGCCAAAGATGAATTGGTAAAGCAGCATGCTAAAGTTGCAGAAGAAGCTGTCTCAGGCTGGGAGAAGTCTGAAAATGAAGTGTTGGGCTTAAAACAGCAACTTGAGGCTACAAATCAGAAAAACTTGGCTCTTAAAGACCGAGTTGGTCATCTTGATGGAGCACTGAAAGAATGTGTGAGGCAGCTTCGACAGGCAAGAGAAGAGCAAGACCGGAATACTAATGAGGTTGTTGCTAAGAAAACTCGTGAATGGGATAGTTCAAAGTCCATACTTGAGAGCCAGCTTGCTGATCTCCAAGCACAACTTCAAGCTGCTAAAACTGAAGCTGCTGCCTCTATTGGTAAGGATCTCCGGTTAAAGCTTGAGGCTACTGAAAAAGCGAACTCTGCTCTTAAGCTTAGTCTTCGGTCTCGAGTCAAGGAGCTTGAAATTGCAACTATAGAGAGGGATTTGAGCACCCAAGCTGCTGAAGCAGCGAGTAAGCAACATTTAGAGAGCATAAAAAAGGTTGTTAAGCTTGAAGCTGAGTGCCGTAGGCTAAACACCTTGGCACGTAAAGCACTACCAGATAATGGTCACAAATCCTTTTCTACATCCTCAGTTTATGTAGAATCCATTATAGATAGCCAATCAGATAGTGGGGAGAGGGTACTGGCAATTGAGTTGGATACAGATAAAATGAGTGACTTGGAGCCAAGTGAATGTGATTCAAGCCAGTCAAATTCACGTACATCTGCTCGTATCACAGATCCTGATAAATTTAATAAAGAAAAAGGTGTTGGAAAAAATCTAATGGTTCCTTCAGTAGATATCAATCTCATGGATGATTTTCTTGAAATGGAAAGGTTTGCTGCAACACCAGTTACAAAAAATAAGAACTGTCACCTTGAGGCAGGACTCAGATCAAACCAGTGTACTGCTGGAAAAAACCTTCTAGAAACTGAACTTGAAACCATGATTCAAAGGACTGCGGAACTGGAGGGGAAGTTAGAGAAGATGGTGACAGAAAAAGTGGAACTTGAGATGACTATGATTGAGTGTGAAAAGGAGATTCAGACATTAAAAAGTCAGCTACTGGAGGCTGATTTGAAGTTGGAAGACCTTCAAACACAGTTGAATATTGCAAATGGATCAAGGTATGCTGCAGATGAAGAAGTAAAGGCCTGTCAAACAATGAGAGAAGTGGCTGAGTCACAACTAAGATCCGTTCAAACTGAACTTGACTGCTTGATTTTAAAAGTCGGTGCACTAGAAGAAGATGTCTCAAGGGAGCGAGCTTTATCTGCTGAAAATGAGGCCAAATGCCAGAAAGTTGAGACTGAGCTATTGATAATGAAACATGAAGCTGAGCTCCAGCGTATGGCTAGTACTAGTGGTGATTTGAAGATACAGCAGGAGAAAGAGCTGGCATTGGCTGCAAGTAAATTTGCAGAGTGCCAGAAAACAATTGCATCTCTTGGCCAACAGTTGAAATCACTTGCAACATTGGAGGACATCTTAATTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0030674 GO:0031410 GO:0031982 GO:0032879 GO:0032880 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0060090 GO:0060178 GO:0060341 GO:0065007 GO:0097708 GO:1903827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FPP

Protein Analysis

582

Amino Acids

64.74

Weight (kDa)

5.11

Isoelectric Point (pI)

48.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FPP	PF05911	82 - 190	1.3e-36	Filament-like plant protein, long coiled-coil
FPP	PF05911	181 - 269	6.7e-22	Filament-like plant protein, long coiled-coil
FPP	PF05911	316 - 383	1.9e-08	Filament-like plant protein, long coiled-coil
FPP	PF05911	401 - 575	1.7e-23	Filament-like plant protein, long coiled-coil

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001130)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05270 AT3G05270 AT3G05270
fragaria_vesca	FvH4_1g25530 FvH4_1g25530 FvH4_1g25530 FvH4_1g25530 FvH4_1g25530 FvH4_1g25530 FvH4_1g25530 FvH4_1g25530 FvH4_2g26980 FvH4_2g26980 FvH4_2g26980 FvH4_2g26980 FvH4_2g26980
malus_domestica	MD08G1162500.v1.1 MD15G1138800.v1.1 MD15G1348000.v1.1
prunus_persica	Prupe.1G495600_v2.0.a1 Prupe.1G495600_v2.0.a1 Prupe.1G495600_v2.0.a1 Prupe.1G495600_v2.0.a1 Prupe.1G495600_v2.0.a1 Prupe.1G495600_v2.0.a1 Prupe.1G495600_v2.0.a1 Prupe.4G281900_v2.0.a1 Prupe.4G281900_v2.0.a1 Prupe.4G281900_v2.0.a1 Prupe.4G281900_v2.0.a1
pyrus_communis	pycom08g14040 pycom15g12550 pycom15g31180
rosa_chinensis	RchiOBHm_Chr2g0123661 RchiOBHm_Chr6g0295851
rosa_laevigata	RLG00000011762 RLG00000018767
rosa_multiflora	Rmu_sc0003139.1_g000002 Rmu_sc0004915.1_g000004 Rmu_sc0004915.1_g000005
rosa_roxburghii	Rroxscaffold_2G00120460 Rroxscaffold_7G00172110
rosa_rugosa	Rorug02G0247200 Rorug06G0254500 Rorug06G0254600 Rorug06G0254600 Rorug06G0254700 Rorug06G0254800
rosa_samantha	Rh2AG306200 Rh2BG314400 Rh2CG292600 Rh2DG329900 Rh6AG368300 Rh6BG376100 Rh6CG382200 Rh6DG368800
rosa_wichuraiana	Rw2G024550 Rw6G032110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	812, 1600
AciI	CCGC	2 cut(s)	10, 1211
AclWI	GGATC	5 cut(s)	79, 594, 983, 1378, 1437
AcoI	YGGCCR	1 cut(s)	1699
AcsI	RAATTY	3 cut(s)	961, 998, 1664
AcuI	CTGAAG	3 cut(s)	582, 729, 1026
AfaI	GTAC	4 cut(s)	891, 970, 1156, 1609
AfiI	CCNNNNNNNGG	2 cut(s)	812, 1600
AflII	CTTAAG	1 cut(s)	632
AhlI	ACTAGT	1 cut(s)	1610
AjuI	GAANNNNNNNTTGG	4 cut(s)	528, 560, 1002, 1034
Alw21I	GWGCWC	4 cut(s)	403, 698, 1489, 1593
Alw26I	GTCTC	5 cut(s)	50, 295, 654, 1507, 1550
Alw44I	GTGCAC	1 cut(s)	1485
AlwI	GGATC	5 cut(s)	79, 594, 983, 1378, 1437
AlwNI	CAGNNNCTG	3 cut(s)	142, 992, 1315
Ama87I	CYCGRG	1 cut(s)	651
AoxI	GGCC	3 cut(s)	1401, 1536, 1699
ApaLI	GTGCAC	1 cut(s)	1485
ApoI	RAATTY	3 cut(s)	961, 998, 1664
ArsI	GACNNNNNNTTYG	2 cut(s)	49, 81
Asp700I	GAANNNNTTC	1 cut(s)	1341
AsuHPI	GGTGA	4 cut(s)	65, 1115, 1252, 1628
AvaI	CYCGRG	1 cut(s)	651
BaeGI	GKGCMC	1 cut(s)	1489
BalI	TGGCCA	1 cut(s)	1701
BanII	GRGCYC	1 cut(s)	1593
BauI	CACGAG	1 cut(s)	483
BbsI	GAAGAC	2 cut(s)	635, 1344
Bbv12I	GWGCWC	4 cut(s)	403, 698, 1489, 1593
BccI	CCATC	2 cut(s)	389, 1231
BceAI	ACGGC	1 cut(s)	756
BciVI	GTATCC	1 cut(s)	901
BclI	TGATCA	1 cut(s)	106
BcoDI	GTCTC	5 cut(s)	50, 295, 654, 1507, 1550
BcuI	ACTAGT	1 cut(s)	1610
BfaI	CTAG	4 cut(s)	1175, 1490, 1605, 1611
BfmI	CTRYAG	2 cut(s)	678, 1383
BfrI	CTTAAG	1 cut(s)	632
BfuI	GTATCC	1 cut(s)	901
BlpI	GCTNAGC	1 cut(s)	1587
BmcAI	AGTACT	1 cut(s)	1609
BmeT110I	CYCGRG	1 cut(s)	651
BmiI	GGNNCC	2 cut(s)	933, 1038
BmsI	GCATC	1 cut(s)	1700
BpiI	GAAGAC	2 cut(s)	635, 1344
BpmI	CTGGAG	3 cut(s)	1238, 1337, 1577
Bpu1102I	GCTNAGC	1 cut(s)	1587
BpuEI	CTTGAG	6 cut(s)	362, 533, 623, 1148, 1280, 1489
Bsa29I	ATCGAT	1 cut(s)	74
BsaAI	YACGTR	2 cut(s)	794, 968
BsaBI	GATNNNNATC	2 cut(s)	76, 1053
BsaI	GGTCTC	1 cut(s)	654
BsaJI	CCNNGG	1 cut(s)	786
BsaWI	WCCGGW	2 cut(s)	450, 591
BsaXI	ACNNNNNCTCC	2 cut(s)	1211, 1241
Bsc4I	CCNNNNNNNGG	2 cut(s)	812, 1600
Bse1I	ACTGG	6 cut(s)	897, 955, 1100, 1150, 1221, 1320
Bse8I	GATNNNNATC	2 cut(s)	76, 1053
BseCI	ATCGAT	1 cut(s)	74
BseDI	CCNNGG	1 cut(s)	786
BseGI	GGATG	2 cut(s)	833, 1069
BseJI	GATNNNNATC	2 cut(s)	76, 1053
BseLI	CCNNNNNNNGG	2 cut(s)	812, 1600
BseMII	CTCAG	8 cut(s)	51, 306, 756, 852, 1153, 1419, 1551, 1578
BseNI	ACTGG	6 cut(s)	897, 955, 1100, 1150, 1221, 1320
BseSI	GKGCMC	1 cut(s)	1489
BseYI	CCCAGC	1 cut(s)	297
BshFI	GGCC	3 cut(s)	1403, 1538, 1701
BshVI	ATCGAT	1 cut(s)	74
BsiHKAI	GWGCWC	4 cut(s)	403, 698, 1489, 1593
BsiHKCI	CYCGRG	1 cut(s)	651
BsiSI	CCGG	2 cut(s)	451, 592
BslFI	GGGAC	1 cut(s)	211
BslI	CCNNNNNNNGG	2 cut(s)	812, 1600
BsmAI	GTCTC	5 cut(s)	50, 295, 654, 1507, 1550
BsmFI	GGGAC	1 cut(s)	211
BsmI	GAATGC	2 cut(s)	116, 132
BsnI	GGCC	3 cut(s)	1403, 1538, 1701
Bso31I	GGTCTC	1 cut(s)	654
BsoBI	CYCGRG	1 cut(s)	651
Bsp1286I	GDGCHC	4 cut(s)	403, 698, 1489, 1593
Bsp143I	GATC	8 cut(s)	71, 106, 529, 586, 988, 1142, 1370, 1442
Bsp1720I	GCTNAGC	1 cut(s)	1587
BspACI	CCGC	2 cut(s)	10, 1211
BspANI	GGCC	3 cut(s)	1403, 1538, 1701
BspCNI	CTCAG	8 cut(s)	52, 305, 757, 851, 1152, 1420, 1552, 1579
BspDI	ATCGAT	1 cut(s)	74
BspLI	GGNNCC	2 cut(s)	933, 1038
BspMAI	CTGCAG	1 cut(s)	1387
BspPI	GGATC	5 cut(s)	79, 594, 983, 1378, 1437
BspQI	GCTCTTC	2 cut(s)	231, 435
BspTI	CTTAAG	1 cut(s)	632
BspTNI	GGTCTC	1 cut(s)	654
BsrI	ACTGG	6 cut(s)	897, 955, 1100, 1150, 1221, 1320
BssECI	CCNNGG	1 cut(s)	786
BssMI	GATC	8 cut(s)	71, 106, 529, 586, 988, 1142, 1370, 1442
BssSI	CACGAG	1 cut(s)	483
BssT1I	CCWWGG	1 cut(s)	786
Bst2BI	CACGAG	1 cut(s)	483
Bst4CI	ACNGT	4 cut(s)	236, 1121, 1353, 1707
Bst6I	CTCTTC	2 cut(s)	231, 435
BstAFI	CTTAAG	1 cut(s)	632
BstAPI	GCANNNNNTGC	1 cut(s)	1655
BstBAI	YACGTR	2 cut(s)	794, 968
BstC8I	GCNNGC	5 cut(s)	267, 521, 525, 1515, 1647
BstF5I	GGATG	2 cut(s)	833, 1069
BstKTI	GATC	8 cut(s)	74, 109, 532, 589, 991, 1145, 1373, 1445
BstMAI	GTCTC	5 cut(s)	50, 295, 654, 1507, 1550
BstMBI	GATC	8 cut(s)	71, 106, 529, 586, 988, 1142, 1370, 1442
BstMWI	GCNNNNNNNGC	9 cut(s)	16, 275, 284, 626, 710, 713, 797, 1523, 1655
BstNSI	RCATGY	1 cut(s)	269
BstSFI	CTRYAG	2 cut(s)	678, 1383
BstSLI	GKGCMC	1 cut(s)	1489
BstV2I	GAAGAC	2 cut(s)	635, 1344
BstX2I	RGATCY	3 cut(s)	586, 988, 1442
BstYI	RGATCY	3 cut(s)	586, 988, 1442
Bsu15I	ATCGAT	1 cut(s)	74
BsuI	GTATCC	1 cut(s)	901
BsuRI	GGCC	3 cut(s)	1403, 1538, 1701
BsuTUI	ATCGAT	1 cut(s)	74
BtsCI	GGATG	2 cut(s)	833, 1069
BtsI	GCAGTG	1 cut(s)	175
BtsIMutI	CAGTG	3 cut(s)	175, 401, 1157
Cac8I	GCNNGC	5 cut(s)	267, 521, 525, 1515, 1647
CaiI	CAGNNNCTG	3 cut(s)	142, 992, 1315
ClaI	ATCGAT	1 cut(s)	74
Csp6I	GTAC	4 cut(s)	890, 969, 1155, 1608
CviAII	CATG	4 cut(s)	266, 1060, 1195, 1580
CviQI	GTAC	4 cut(s)	890, 969, 1155, 1608
DpnI	GATC	8 cut(s)	73, 108, 531, 588, 990, 1144, 1372, 1444
DpnII	GATC	8 cut(s)	71, 106, 529, 586, 988, 1142, 1370, 1442
DraI	TTTAAA	1 cut(s)	1476
EaeI	YGGCCR	1 cut(s)	1699
Eam1104I	CTCTTC	2 cut(s)	231, 435
EarI	CTCTTC	2 cut(s)	231, 435
EciI	GGCGGA	1 cut(s)	25
Ecl136II	GAGCTC	1 cut(s)	1591
Eco130I	CCWWGG	1 cut(s)	786
Eco147I	AGGCCT	1 cut(s)	1403
Eco24I	GRGCYC	1 cut(s)	1593
Eco31I	GGTCTC	1 cut(s)	654
Eco32I	GATATC	2 cut(s)	78, 1051
Eco53kI	GAGCTC	1 cut(s)	1591
Eco57I	CTGAAG	3 cut(s)	582, 729, 1026
Eco88I	CYCGRG	1 cut(s)	651
EcoICRI	GAGCTC	1 cut(s)	1591
EcoRV	GATATC	2 cut(s)	78, 1051
EcoT14I	CCWWGG	1 cut(s)	786
EcoT38I	GRGCYC	1 cut(s)	1593
ErhI	CCWWGG	1 cut(s)	786
FaeI	CATG	4 cut(s)	269, 1063, 1198, 1583
FalI	AAGNNNNNCTT	4 cut(s)	528, 560, 1242, 1274
FaqI	GGGAC	1 cut(s)	211
FatI	CATG	4 cut(s)	265, 1059, 1194, 1579
FbaI	TGATCA	1 cut(s)	106
FokI	GGATG	2 cut(s)	820, 1076
FriOI	GRGCYC	1 cut(s)	1593
FspBI	CTAG	4 cut(s)	1175, 1490, 1605, 1611
GsaI	CCCAGC	1 cut(s)	301
GsuI	CTGGAG	3 cut(s)	1238, 1337, 1577
HaeIII	GGCC	3 cut(s)	1403, 1538, 1701
HapII	CCGG	2 cut(s)	451, 592
Hin1II	CATG	4 cut(s)	269, 1063, 1198, 1583
HindIII	AAGCTT	3 cut(s)	599, 635, 755
HinfI	GANTC	8 cut(s)	13, 654, 851, 947, 1137, 1198, 1291, 1430
HpaII	CCGG	2 cut(s)	451, 592
HphI	GGTGA	4 cut(s)	65, 1115, 1252, 1628
Hpy166II	GTNNAC	2 cut(s)	1155, 1487
Hpy188I	TCNGA	8 cut(s)	40, 91, 103, 310, 357, 874, 1142, 1296
Hpy188III	TCNNGA	8 cut(s)	69, 230, 392, 485, 651, 992, 1073, 1175
Hpy8I	GTNNAC	2 cut(s)	1155, 1487
HpyAV	CCTTC	4 cut(s)	199, 1050, 1181, 1352
HpyCH4III	ACNGT	4 cut(s)	236, 1121, 1353, 1707
HpyCH4IV	ACGT	2 cut(s)	793, 967
HpyF10VI	GCNNNNNNNGC	9 cut(s)	16, 275, 284, 626, 710, 713, 797, 1523, 1655
HpySE526I	ACGT	2 cut(s)	793, 967
Hsp92II	CATG	4 cut(s)	269, 1063, 1198, 1583
Ksp22I	TGATCA	1 cut(s)	106
Kzo9I	GATC	8 cut(s)	71, 106, 529, 586, 988, 1142, 1370, 1442
LguI	GCTCTTC	2 cut(s)	231, 435
LmnI	GCTCC	5 cut(s)	398, 661, 931, 1510, 1596
LweI	GCATC	1 cut(s)	1700
MaeI	CTAG	4 cut(s)	1175, 1490, 1605, 1611
MaeII	ACGT	2 cut(s)	793, 967
MaeIII	GTNAC	7 cut(s)	148, 815, 923, 1102, 1121, 1240, 1431
MalI	GATC	8 cut(s)	73, 108, 531, 588, 990, 1144, 1372, 1444
MboI	GATC	8 cut(s)	71, 106, 529, 586, 988, 1142, 1370, 1442
MfeI	CAATTG	2 cut(s)	897, 1686
MflI	RGATCY	3 cut(s)	586, 988, 1442
MhlI	GDGCHC	4 cut(s)	403, 698, 1489, 1593
MlsI	TGGCCA	1 cut(s)	1701
MluCI	AATT	8 cut(s)	251, 669, 897, 961, 998, 1664, 1686, 1740
MluNI	TGGCCA	1 cut(s)	1701
MlyI	GAGTC	4 cut(s)	22, 663, 1131, 1439
MmeI	TCCRAC	3 cut(s)	885, 1000, 1314
Mox20I	TGGCCA	1 cut(s)	1701
MroXI	GAANNNNTTC	1 cut(s)	1341
MscI	TGGCCA	1 cut(s)	1701
MslI	CAYNNNNRTG	1 cut(s)	393
Msp20I	TGGCCA	1 cut(s)	1701
MspA1I	CMGCKG	1 cut(s)	221
MspCI	CTTAAG	1 cut(s)	632
MspI	CCGG	2 cut(s)	451, 592
MunI	CAATTG	2 cut(s)	897, 1686
Mva1269I	GAATGC	2 cut(s)	116, 132
MwoI	GCNNNNNNNGC	9 cut(s)	16, 275, 284, 626, 710, 713, 797, 1523, 1655
NdeII	GATC	8 cut(s)	71, 106, 529, 586, 988, 1142, 1370, 1442
NlaIII	CATG	4 cut(s)	269, 1063, 1198, 1583
NlaIV	GGNNCC	2 cut(s)	933, 1038
NmuCI	GTSAC	6 cut(s)	148, 815, 923, 1121, 1240, 1431
NspI	RCATGY	1 cut(s)	269
PaeI	GCATGC	1 cut(s)	269
PaeR7I	CTCGAG	1 cut(s)	651
PceI	AGGCCT	1 cut(s)	1403
PciSI	GCTCTTC	2 cut(s)	231, 435
PctI	GAATGC	2 cut(s)	116, 132
PdmI	GAANNNNTTC	1 cut(s)	1341
PfeI	GAWTC	4 cut(s)	851, 947, 1198, 1291
PflMI	CCANNNNNTGG	2 cut(s)	812, 1600
PleI	GAGTC	4 cut(s)	21, 662, 1131, 1438
PpsI	GAGTC	4 cut(s)	21, 662, 1131, 1438
Ppu21I	YACGTR	2 cut(s)	794, 968
Psp124BI	GAGCTC	1 cut(s)	1593
PspFI	CCCAGC	1 cut(s)	297
PspN4I	GGNNCC	2 cut(s)	933, 1038
PstI	CTGCAG	1 cut(s)	1387
PstNI	CAGNNNCTG	3 cut(s)	142, 992, 1315
PsuI	RGATCY	3 cut(s)	586, 988, 1442
PvuII	CAGCTG	1 cut(s)	221
RsaI	GTAC	4 cut(s)	891, 970, 1156, 1609
RsaNI	GTAC	4 cut(s)	890, 969, 1155, 1608
RseI	CAYNNNNRTG	1 cut(s)	393
SacI	GAGCTC	1 cut(s)	1593
SapI	GCTCTTC	2 cut(s)	231, 435
Sau3AI	GATC	8 cut(s)	71, 106, 529, 586, 988, 1142, 1370, 1442
ScaI	AGTACT	1 cut(s)	1609
SchI	GAGTC	4 cut(s)	22, 663, 1131, 1439
SduI	GDGCHC	4 cut(s)	403, 698, 1489, 1593
SfaNI	GCATC	1 cut(s)	1700
SfcI	CTRYAG	2 cut(s)	678, 1383
Sfr274I	CTCGAG	1 cut(s)	651
SlaI	CTCGAG	1 cut(s)	651
SmiMI	CAYNNNNRTG	1 cut(s)	393
SmlI	CTYRAG	8 cut(s)	341, 512, 602, 632, 651, 1127, 1259, 1504
SmoI	CTYRAG	8 cut(s)	341, 512, 602, 632, 651, 1127, 1259, 1504
SpeI	ACTAGT	1 cut(s)	1610
SphI	GCATGC	1 cut(s)	269
Sse9I	AATT	8 cut(s)	251, 669, 897, 961, 998, 1664, 1686, 1740
SseBI	AGGCCT	1 cut(s)	1403
SsiI	CCGC	2 cut(s)	10, 1211
SspI	AATATT	1 cut(s)	1360
SspMI	CTAG	4 cut(s)	1175, 1490, 1605, 1611
SstI	GAGCTC	1 cut(s)	1593
StuI	AGGCCT	1 cut(s)	1403
StyI	CCWWGG	1 cut(s)	786
TaaI	ACNGT	4 cut(s)	236, 1121, 1353, 1707
TaiI	ACGT	2 cut(s)	796, 970
TaqI	TCGA	3 cut(s)	74, 427, 652
TaqII	GACCGA	2 cut(s)	393, 636
TasI	AATT	8 cut(s)	251, 669, 897, 961, 998, 1664, 1686, 1740
TatI	WGTACW	2 cut(s)	1154, 1607
TfiI	GAWTC	4 cut(s)	851, 947, 1198, 1291
TscAI	CASTG	3 cut(s)	175, 408, 1157
TseFI	GTSAC	6 cut(s)	148, 815, 923, 1121, 1240, 1431
Tsp45I	GTSAC	6 cut(s)	148, 815, 923, 1121, 1240, 1431
TspDTI	ATGAA	7 cut(s)	189, 201, 264, 330, 1404, 1589, 1596
TspGWI	ACGGA	1 cut(s)	1435
TspRI	CASTG	3 cut(s)	175, 408, 1157
Van91I	CCANNNNNTGG	2 cut(s)	812, 1600
Vha464I	CTTAAG	1 cut(s)	632
VneI	GTGCAC	1 cut(s)	1485
XapI	RAATTY	3 cut(s)	961, 998, 1664
XbaI	TCTAGA	1 cut(s)	1174
XceI	RCATGY	1 cut(s)	269
XcmI	CCANNNNNNNNNTGG	3 cut(s)	250, 875, 1157
XhoI	CTCGAG	1 cut(s)	651
XmnI	GAANNNNTTC	1 cut(s)	1341
XspI	CTAG	4 cut(s)	1175, 1490, 1605, 1611
ZrmI	AGTACT	1 cut(s)	1609

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.