Rroxscaffold_3G00256540

Subtilase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
50897686 .. 50907194
9509 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00256540.1

Sequence Viewer

Length: 2289 bp
ATGACCACTCATTTCCTTCTATACACATTATTTCTTACAGCATTTGCTCTATCTTGCCATGGCGAAGAGAGGAAGGTTCACATTGTATACATGGGAGAGCGGCACCATGGAGATTTTTCAGCTCGATCCACACACTATTCAGTGCTACAAAACGTACTTGGAAGCTTCAAGTCGGCCAAAGAGTCCCTGATCTATAGTTATGGGAAGAGCTTTAATGGGTTTGCTGCAAAGTTGTCGGATGAAGAAGTTGCAGAGTTGGAAGACATGGAAGGTATAGCTTCAGTGATTCCAAACCACAGACTAAAGCTTCACACAACAAGGTCGTGGGACTTCATGGGGTTCAGCAAAGCCCAACTTGGAGCATCTGTAGGAGGAGAGGTTGTGATAGGGCTTCTAGACACAGGAATCTGGCCGGAATCTGATAGCTTCAGTGATGATGGCTTTGGCCCTCCACCCAAGAAATGGAAAGGCAAATGCAAAGGTGCCAACTTCACCTGCAACAACAAAGTTATTGGAGCCCGCTACTACAACAGTGATGGCTCCTATGACCCCACTGACATCCAGTCCCCAAGAGATTCCGACGGACATGGAAGCCACACTGCTTCAACTGCTGCAGGCCGCGAGGTGCCAGCCAGTTACTTGGGGTCGTTAGCTTCTGGAACTGCAAGAGGTGGAGTCCCAAATGCTAGGATTGCTGTCTACAAAGTTTGCTGGGCATCTGGATGTTATTCTTCAGATGTCCTTGCAGCATTCGATGATGCAATAGCAGATGGAGTTGATATTTTATCGGTCTCACTTGGCAGTTACTTCCCACTCCAATACTTAAAAGACCCCATTGCTATTGGGTCTTTCCATGCCATGAAATATGGTATAGTGACCTCAACTTCTGCTGGAAACTCTGGCCCTGATCCATTATCAGTTTGTAATCATGCACCATGGATAATGACCGTTGCGGCCAGCACCATTGACAGAAAATTTGTGGCAAAAGCAGTTCTTGGCAATGGAGAAGTCTATAGTGGACTTTCAATTAATAATTTTGACCTGAATGGAAAGTCATATCCCCTAATATGGGGAGGAGATGCTGCTAATTTCTCCGCTGGAGCTAACTCGGAGATTGCAAGCTTTTGTCCAAATGGAGCCCTGAATTCACACAGAGTAAAGGGAAAGATTGTTTTCTGTGAAACCATAGACGATGGTACGGGTGTTCTACTAGCCAATGGTGTTGGTACAATTATGGCTGATTCATCTAACTCTGATTTGGCATTTAATTACCCGTTAGCAGCAACTGTGGTTACAATAGGAGATGGACAGAGAATTATGAACTATATCAGATCAACAGCGAATCCAAATGCAACAATTCTTGTTGGCGAGACGGACATGGATATCATGGCACCTGTTGTTGTGTCATTTTCTTCTAGAGGACCCAACCCTATAACCCCACATATCCTCAAGCCTGATCTGACCGCCCCTGGTGTTGACATACTTGCTGCTTGGTCTCCAGTGGCACCGCCTTCCAGTTACGAAGATGACACCAGGAGTGTCGAATTTAATGTTATCTCCGGGACATCCATGTCCTGCCCTCATGCTAGTGGTGCTGCAGCTTATGTCAAGGCTGCACATCCAAATTGGTCTCCTGCTGCAATCAAATCTGCACTCATGACAACAGCTCATGTCCTTGACCCAAAGAAGCATGAAGACCTCGAATTCGCTTATGGGTCTGGTCACATCAACCCTCTGAAAGCAGTAGACCCCGGGCTTGTTTTTGATGCACATGTAGCAGACTATGTACATTTCCTCTGCAAGCAGGGTTACAATACCACCACTTTGAAGCTCATCACTGGTGACAACAGCAGTACTTGTGGCAGGACAAAGCCAGGAAGAGCTTGGGATCTTAACTATCCATCGTTCTCCCTAGCAGTTGAAGATGGCCAGCATATCAATGCTGTCTTTACTAGAACAGTCACAAATGTGGGATCACCAAACTCAACCTATACTATTAAGGCGCACACACCCTCCTCAAGTGTTTCGGTAAAACCATCAACCATTTCTTTCTCTTCTGTCGGTGAGAAGAAATCCTTCACAGTCAAGGTAATTGGTCCGCCGATTGCACAGCAGCCGATCATGTCCGGTGCAATCGTGTTGACTGATGGGATCCATCTGGTGAGAAGCCCTCTCGTTATCTACACAATCCTCCCTGGTGCTGCACGTTCGTACTCCATAGCTGAGAAAAAACCAAGTTTTAAAGGATCTTCCTTGTACCACAGAAATGGGATCTTCAGACACAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

762

Amino Acids

81.07

Weight (kDa)

6.6

Isoelectric Point (pI)

26.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 26 - 104 1.3e-17 Peptidase inhibitor I9
Peptidase_S8 PF00082 125 - 574 6.9e-44 Subtilase family
fn3_6 PF17766 630 - 727 1.9e-24 Fibronectin type-III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012611)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 503
AasI GACNNNNNNGTC 1 cut(s) 1570
Acc36I ACCTGC 1 cut(s) 503
AccB1I GGYRCC 5 cut(s) 102, 482, 625, 1390, 1504
AccB7I CCANNNNNTGG 1 cut(s) 462
AccBSI CCGCTC 1 cut(s) 100
AccI GTMKAC 3 cut(s) 87, 699, 1746
AccII CGCG 1 cut(s) 621
AciI CCGC 8 cut(s) 100, 520, 619, 953, 1095, 1464, 1508, 2099
AclWI GGATC 8 cut(s) 120, 902, 1896, 1981, 2146, 2159, 2254, 2279
AcoI YGGCCR 4 cut(s) 174, 410, 954, 1927
AcsI RAATTY 4 cut(s) 974, 1144, 1544, 1703
AcuI CTGAAG 4 cut(s) 264, 412, 717, 2260
AfaI GTAC 7 cut(s) 156, 1198, 1228, 1788, 1855, 2213, 2258
AfiI CCNNNNNNNGG 3 cut(s) 462, 1068, 1069
AflIII ACRYGT 1 cut(s) 1771
AgsI TTSAA 5 cut(s) 169, 606, 1026, 1828, 1922
AhdI GACNNNNNGTC 1 cut(s) 562
AjnI CCWGG 4 cut(s) 1468, 1532, 1873, 2194
AleI CACNNNNGTG 1 cut(s) 1967
Alw26I GTCTC 4 cut(s) 796, 1364, 1500, 1635
AlwI GGATC 8 cut(s) 120, 902, 1896, 1981, 2146, 2159, 2254, 2279
AlwNI CAGNNNCTG 1 cut(s) 1286
Ama87I CYCGRG 1 cut(s) 1751
AoxI GGCC 7 cut(s) 174, 410, 445, 616, 901, 954, 1927
ApoI RAATTY 4 cut(s) 974, 1144, 1544, 1703
ArsI GACNNNNNNTTYG 4 cut(s) 959, 991, 1688, 1720
AseI ATTAAT 1 cut(s) 1029
Asp700I GAANNNNTTC 1 cut(s) 2075
AspLEI GCGC 1 cut(s) 2005
AspS9I GGNCC 4 cut(s) 446, 902, 1421, 2096
AsuC2I CCSGG 3 cut(s) 1561, 1752, 1753
AsuHPI GGTGA 5 cut(s) 484, 1853, 1968, 2075, 2173
AvaI CYCGRG 1 cut(s) 1751
AvaII GGWCC 2 cut(s) 1421, 2096
BaeI ACNNNNGTAYC 2 cut(s) 1188, 1221
BalI TGGCCA 1 cut(s) 1929
BamHI GGATCC 1 cut(s) 2151
BanI GGYRCC 5 cut(s) 102, 482, 625, 1390, 1504
BanII GRGCYC 2 cut(s) 520, 1141
BbsI GAAGAC 2 cut(s) 267, 1701
BcgI CGANNNNNNTGC 2 cut(s) 216, 250
BciT130I CCWGG 4 cut(s) 1470, 1534, 1875, 2196
BcnI CCSGG 3 cut(s) 1561, 1752, 1753
BcoDI GTCTC 4 cut(s) 796, 1364, 1500, 1635
BfaI CTAG 7 cut(s) 395, 687, 1211, 1416, 1587, 1913, 1953
BfmI CTRYAG 5 cut(s) 193, 366, 612, 1012, 1596
BfuAI ACCTGC 1 cut(s) 503
BmcAI AGTACT 1 cut(s) 1855
Bme1390I CCNGG 7 cut(s) 1470, 1534, 1561, 1752, 1753, 1875, 2196
Bme18I GGWCC 2 cut(s) 1421, 2096
BmeRI GACNNNNNGTC 1 cut(s) 562
BmeT110I CYCGRG 1 cut(s) 1751
BmgT120I GGNCC 4 cut(s) 446, 902, 1421, 2096
BmrFI CCNGG 7 cut(s) 1470, 1534, 1561, 1752, 1753, 1875, 2196
BmsI GCATC 5 cut(s) 371, 725, 748, 1069, 1756
BpiI GAAGAC 2 cut(s) 267, 1701
BplI GAGNNNNNCTC 2 cut(s) 2155, 2187
BpmI CTGGAG 2 cut(s) 1119, 1482
BpuEI CTTGAG 2 cut(s) 1433, 2002
BpuMI CCSGG 3 cut(s) 1561, 1752, 1753
BsaI GGTCTC 3 cut(s) 796, 1500, 1635
BsaJI CCNNGG 7 cut(s) 58, 106, 935, 1468, 1750, 1751, 2194
BsaWI WCCGGW 1 cut(s) 2126
BsaXI ACNNNNNCTCC 8 cut(s) 351, 363, 366, 381, 393, 396, 1997, 2027
Bsc4I CCNNNNNNNGG 3 cut(s) 462, 1068, 1069
Bse1I ACTGG 5 cut(s) 562, 633, 1499, 1515, 1843
Bse3DI GCAATG 2 cut(s) 834, 1006
BseBI CCWGG 4 cut(s) 1470, 1534, 1875, 2196
BseDI CCNNGG 7 cut(s) 58, 106, 935, 1468, 1750, 1751, 2194
BseGI GGATG 5 cut(s) 244, 558, 728, 1565, 1618
BseLI CCNNNNNNNGG 3 cut(s) 462, 1068, 1069
BseMI GCAATG 2 cut(s) 834, 1006
BseMII CTCAG 1 cut(s) 2214
BseNI ACTGG 5 cut(s) 562, 633, 1499, 1515, 1843
BseRI GAGGAG 3 cut(s) 387, 1089, 2005
BseYI CCCAGC 1 cut(s) 711
BsgI GTGCAG 3 cut(s) 1599, 1635, 2187
Bsh1236I CGCG 1 cut(s) 621
BshFI GGCC 7 cut(s) 176, 412, 447, 618, 903, 956, 1929
BshNI GGYRCC 5 cut(s) 102, 482, 625, 1390, 1504
BsiHKCI CYCGRG 1 cut(s) 1751
BsiSI CCGG 4 cut(s) 413, 1560, 1752, 2127
BslFI GGGAC 5 cut(s) 169, 341, 550, 662, 1576
BslI CCNNNNNNNGG 3 cut(s) 462, 1068, 1069
BsmAI GTCTC 4 cut(s) 796, 1364, 1500, 1635
BsmBI CGTCTC 1 cut(s) 1364
BsmFI GGGAC 5 cut(s) 169, 341, 550, 662, 1576
BsmI GAATGC 1 cut(s) 749
BsnI GGCC 7 cut(s) 176, 412, 447, 618, 903, 956, 1929
Bso31I GGTCTC 3 cut(s) 796, 1500, 1635
BsoBI CYCGRG 1 cut(s) 1751
Bsp1286I GDGCHC 2 cut(s) 520, 1141
Bsp1407I TGTACA 1 cut(s) 1786
Bsp19I CCATGG 3 cut(s) 58, 106, 935
BspACI CCGC 8 cut(s) 100, 520, 619, 953, 1095, 1464, 1508, 2099
BspANI GGCC 7 cut(s) 176, 412, 447, 618, 903, 956, 1929
BspCNI CTCAG 1 cut(s) 2215
BspFNI CGCG 1 cut(s) 621
BspHI TCATGA 1 cut(s) 1656
BspMAI CTGCAG 2 cut(s) 616, 1600
BspMI ACCTGC 1 cut(s) 503
BspPI GGATC 8 cut(s) 120, 902, 1896, 1981, 2146, 2159, 2254, 2279
BspQI GCTCTTC 2 cut(s) 200, 1873
BspT107I GGYRCC 5 cut(s) 102, 482, 625, 1390, 1504
BspTNI GGTCTC 3 cut(s) 796, 1500, 1635
BsrBI CCGCTC 1 cut(s) 100
BsrDI GCAATG 2 cut(s) 834, 1006
BsrGI TGTACA 1 cut(s) 1786
BsrI ACTGG 5 cut(s) 562, 633, 1499, 1515, 1843
BssECI CCNNGG 7 cut(s) 58, 106, 935, 1468, 1750, 1751, 2194
BssNAI GTATAC 1 cut(s) 88
BssT1I CCWWGG 3 cut(s) 58, 106, 935
Bst1107I GTATAC 1 cut(s) 88
Bst2UI CCWGG 4 cut(s) 1470, 1534, 1875, 2196
Bst4CI ACNGT 5 cut(s) 533, 949, 1288, 1960, 2083
Bst6I CTCTTC 4 cut(s) 60, 200, 1873, 2059
BstAUI TGTACA 1 cut(s) 1786
BstC8I GCNNGC 7 cut(s) 520, 616, 630, 958, 1120, 1802, 1931
BstDEI CTNAG 1 cut(s) 2223
BstDSI CCRYGG 3 cut(s) 58, 106, 935
BstF5I GGATG 5 cut(s) 244, 558, 728, 1565, 1618
BstFNI CGCG 1 cut(s) 621
BstHHI GCGC 1 cut(s) 2005
BstMAI GTCTC 4 cut(s) 796, 1364, 1500, 1635
BstMWI GCNNNNNNNGC 4 cut(s) 608, 692, 1592, 1775
BstNI CCWGG 4 cut(s) 1470, 1534, 1875, 2196
BstNSI RCATGY 1 cut(s) 1775
BstSCI CCNGG 7 cut(s) 1468, 1532, 1559, 1750, 1751, 1873, 2194
BstSFI CTRYAG 5 cut(s) 193, 366, 612, 1012, 1596
BstUI CGCG 1 cut(s) 621
BstV2I GAAGAC 2 cut(s) 267, 1701
BstX2I RGATCY 4 cut(s) 1888, 2151, 2246, 2271
BstXI CCANNNNNNTGG 2 cut(s) 640, 2267
BstYI RGATCY 4 cut(s) 1888, 2151, 2246, 2271
BstZ17I GTATAC 1 cut(s) 88
BsuRI GGCC 7 cut(s) 176, 412, 447, 618, 903, 956, 1929
BtgI CCRYGG 3 cut(s) 58, 106, 935
BtsCI GGATG 5 cut(s) 244, 558, 728, 1565, 1618
BtsI GCAGTG 1 cut(s) 597
BtsIMutI CAGTG 8 cut(s) 147, 288, 436, 538, 552, 597, 1506, 1836
BveI ACCTGC 1 cut(s) 503
Cac8I GCNNGC 7 cut(s) 520, 616, 630, 958, 1120, 1802, 1931
CaiI CAGNNNCTG 1 cut(s) 1286
CciI TCATGA 1 cut(s) 1656
CfoI GCGC 1 cut(s) 2005
Cfr13I GGNCC 4 cut(s) 446, 902, 1421, 2096
Cfr9I CCCGGG 1 cut(s) 1751
Csp6I GTAC 7 cut(s) 155, 1197, 1227, 1787, 1854, 2212, 2257
CviQI GTAC 7 cut(s) 155, 1197, 1227, 1787, 1854, 2212, 2257
DdeI CTNAG 1 cut(s) 2223
DraI TTTAAA 1 cut(s) 2242
DrdI GACNNNNNNGTC 1 cut(s) 1570
DriI GACNNNNNGTC 1 cut(s) 562
DseDI GACNNNNNNGTC 1 cut(s) 1570
EaeI YGGCCR 4 cut(s) 174, 410, 954, 1927
Eam1104I CTCTTC 4 cut(s) 60, 200, 1873, 2059
Eam1105I GACNNNNNGTC 1 cut(s) 562
EarI CTCTTC 4 cut(s) 60, 200, 1873, 2059
EciI GGCGGA 1 cut(s) 2088
Eco130I CCWWGG 3 cut(s) 58, 106, 935
Eco24I GRGCYC 2 cut(s) 520, 1141
Eco31I GGTCTC 3 cut(s) 796, 1500, 1635
Eco32I GATATC 1 cut(s) 1384
Eco47I GGWCC 2 cut(s) 1421, 2096
Eco57I CTGAAG 4 cut(s) 264, 412, 717, 2260
Eco88I CYCGRG 1 cut(s) 1751
EcoO109I RGGNCCY 1 cut(s) 1421
EcoRI GAATTC 2 cut(s) 1144, 1703
EcoRII CCWGG 4 cut(s) 1468, 1532, 1873, 2194
EcoRV GATATC 1 cut(s) 1384
EcoT14I CCWWGG 3 cut(s) 58, 106, 935
EcoT38I GRGCYC 2 cut(s) 520, 1141
ErhI CCWWGG 3 cut(s) 58, 106, 935
Esp3I CGTCTC 1 cut(s) 1364
FalI AAGNNNNNCTT 6 cut(s) 339, 371, 978, 1010, 2060, 2092
FaqI GGGAC 5 cut(s) 169, 341, 550, 662, 1576
FauI CCCGC 1 cut(s) 527
FblI GTMKAC 3 cut(s) 87, 699, 1746
FokI GGATG 5 cut(s) 251, 545, 735, 1552, 1605
FriOI GRGCYC 2 cut(s) 520, 1141
FspBI CTAG 7 cut(s) 395, 687, 1211, 1416, 1587, 1913, 1953
GlaI GCGC 1 cut(s) 2004
GsaI CCCAGC 1 cut(s) 715
GsuI CTGGAG 2 cut(s) 1119, 1482
HaeIII GGCC 7 cut(s) 176, 412, 447, 618, 903, 956, 1929
HapII CCGG 4 cut(s) 413, 1560, 1752, 2127
HhaI GCGC 1 cut(s) 2005
Hin6I GCGC 1 cut(s) 2003
HinP1I GCGC 1 cut(s) 2003
HincII GTYRAC 2 cut(s) 1477, 2142
HindII GTYRAC 2 cut(s) 1477, 2142
HindIII AAGCTT 3 cut(s) 163, 305, 1120
HinfI GANTC 8 cut(s) 182, 286, 405, 416, 575, 675, 1241, 1342
HpaII CCGG 4 cut(s) 413, 1560, 1752, 2127
HphI GGTGA 5 cut(s) 484, 1853, 1968, 2075, 2173
Hpy166II GTNNAC 7 cut(s) 79, 88, 700, 1019, 1477, 1747, 2142
Hpy188III TCNNGA 5 cut(s) 395, 657, 720, 1416, 1657
Hpy8I GTNNAC 7 cut(s) 79, 88, 700, 1019, 1477, 1747, 2142
Hpy99I CGWCG 1 cut(s) 584
HpyAV CCTTC 5 cut(s) 26, 67, 263, 1521, 2086
HpyCH4III ACNGT 5 cut(s) 533, 949, 1288, 1960, 2083
HpyCH4IV ACGT 2 cut(s) 153, 2206
HpyF10VI GCNNNNNNNGC 4 cut(s) 608, 692, 1592, 1775
HpyF3I CTNAG 1 cut(s) 2223
HpySE526I ACGT 2 cut(s) 153, 2206
HspAI GCGC 1 cut(s) 2003
LguI GCTCTTC 2 cut(s) 200, 1873
LmnI GCTCC 5 cut(s) 359, 515, 545, 1100, 1136
LweI GCATC 5 cut(s) 371, 725, 748, 1069, 1756
MaeI CTAG 7 cut(s) 395, 687, 1211, 1416, 1587, 1913, 1953
MaeII ACGT 2 cut(s) 153, 2206
MaeIII GTNAC 9 cut(s) 635, 803, 874, 1291, 1517, 1721, 1808, 1841, 1960
MbiI CCGCTC 1 cut(s) 100
MflI RGATCY 4 cut(s) 1888, 2151, 2246, 2271
MhlI GDGCHC 2 cut(s) 520, 1141
MlsI TGGCCA 1 cut(s) 1929
MluNI TGGCCA 1 cut(s) 1929
MlyI GAGTC 2 cut(s) 191, 684
MmeI TCCRAC 3 cut(s) 216, 237, 603
Mox20I TGGCCA 1 cut(s) 1929
MroXI GAANNNNTTC 1 cut(s) 2075
MscI TGGCCA 1 cut(s) 1929
MseI TTAA 8 cut(s) 213, 824, 1029, 1266, 1548, 1893, 1998, 2241
MslI CAYNNNNRTG 5 cut(s) 721, 1587, 1938, 1967, 2265
Msp20I TGGCCA 1 cut(s) 1929
MspA1I CMGCKG 1 cut(s) 1097
MspI CCGG 4 cut(s) 413, 1560, 1752, 2127
MspR9I CCNGG 7 cut(s) 1470, 1534, 1561, 1752, 1753, 1875, 2196
Mva1269I GAATGC 1 cut(s) 749
MvaI CCWGG 4 cut(s) 1470, 1534, 1875, 2196
MvnI CGCG 1 cut(s) 621
MwoI GCNNNNNNNGC 4 cut(s) 608, 692, 1592, 1775
NciI CCSGG 3 cut(s) 1561, 1752, 1753
NcoI CCATGG 3 cut(s) 58, 106, 935
NmuCI GTSAC 4 cut(s) 874, 1721, 1841, 1960
NspI RCATGY 1 cut(s) 1775
OliI CACNNNNGTG 1 cut(s) 1967
PagI TCATGA 1 cut(s) 1656
PaqCI CACCTGC 1 cut(s) 503
PciI ACATGT 1 cut(s) 1771
PciSI GCTCTTC 2 cut(s) 200, 1873
PctI GAATGC 1 cut(s) 749
PdmI GAANNNNTTC 1 cut(s) 2075
PfeI GAWTC 6 cut(s) 286, 405, 416, 575, 1241, 1342
PflMI CCANNNNNTGG 1 cut(s) 462
PfoI TCCNGGA 1 cut(s) 1559
PleI GAGTC 2 cut(s) 190, 683
PpsI GAGTC 2 cut(s) 190, 683
PpuMI RGGWCCY 1 cut(s) 1421
PscI ACATGT 1 cut(s) 1771
PshBI ATTAAT 1 cut(s) 1029
Psp5II RGGWCCY 1 cut(s) 1421
Psp6I CCWGG 4 cut(s) 1468, 1532, 1873, 2194
PspFI CCCAGC 1 cut(s) 711
PspGI CCWGG 4 cut(s) 1468, 1532, 1873, 2194
PspPI GGNCC 4 cut(s) 446, 902, 1421, 2096
PspPPI RGGWCCY 1 cut(s) 1421
PstI CTGCAG 2 cut(s) 616, 1600
PstNI CAGNNNCTG 1 cut(s) 1286
PsuI RGATCY 4 cut(s) 1888, 2151, 2246, 2271
RsaI GTAC 7 cut(s) 156, 1198, 1228, 1788, 1855, 2213, 2258
RsaNI GTAC 7 cut(s) 155, 1197, 1227, 1787, 1854, 2212, 2257
RseI CAYNNNNRTG 5 cut(s) 721, 1587, 1938, 1967, 2265
SapI GCTCTTC 2 cut(s) 200, 1873
SaqAI TTAA 8 cut(s) 213, 824, 1029, 1266, 1548, 1893, 1998, 2241
Sau96I GGNCC 4 cut(s) 446, 902, 1421, 2096
ScaI AGTACT 1 cut(s) 1855
SchI GAGTC 2 cut(s) 191, 684
ScrFI CCNGG 7 cut(s) 1470, 1534, 1561, 1752, 1753, 1875, 2196
SduI GDGCHC 2 cut(s) 520, 1141
SfaNI GCATC 5 cut(s) 371, 725, 748, 1069, 1756
SfcI CTRYAG 5 cut(s) 193, 366, 612, 1012, 1596
SinI GGWCC 2 cut(s) 1421, 2096
SmaI CCCGGG 1 cut(s) 1753
SmiMI CAYNNNNRTG 5 cut(s) 721, 1587, 1938, 1967, 2265
SmlI CTYRAG 2 cut(s) 1448, 2017
SmoI CTYRAG 2 cut(s) 1448, 2017
SsiI CCGC 8 cut(s) 100, 520, 619, 953, 1095, 1464, 1508, 2099
SspMI CTAG 7 cut(s) 395, 687, 1211, 1416, 1587, 1913, 1953
StyD4I CCNGG 7 cut(s) 1468, 1532, 1559, 1750, 1751, 1873, 2194
StyI CCWWGG 3 cut(s) 58, 106, 935
TaaI ACNGT 5 cut(s) 533, 949, 1288, 1960, 2083
TaiI ACGT 2 cut(s) 156, 2209
TaqI TCGA 4 cut(s) 124, 753, 1542, 1701
TaqII GACCGA 1 cut(s) 778
TatI WGTACW 2 cut(s) 1786, 1853
TauI GCSGC 3 cut(s) 103, 621, 956
TfiI GAWTC 6 cut(s) 286, 405, 416, 575, 1241, 1342
Tru1I TTAA 8 cut(s) 213, 824, 1029, 1266, 1548, 1893, 1998, 2241
Tru9I TTAA 8 cut(s) 213, 824, 1029, 1266, 1548, 1893, 1998, 2241
TscAI CASTG 8 cut(s) 147, 288, 436, 538, 559, 604, 1506, 1843
TseFI GTSAC 4 cut(s) 874, 1721, 1841, 1960
Tsp45I GTSAC 4 cut(s) 874, 1721, 1841, 1960
TspDTI ATGAA 6 cut(s) 255, 322, 875, 1233, 1334, 1707
TspGWI ACGGA 2 cut(s) 597, 1388
TspMI CCCGGG 1 cut(s) 1751
TspRI CASTG 8 cut(s) 147, 288, 436, 538, 559, 604, 1506, 1843
Van91I CCANNNNNTGG 1 cut(s) 462
VpaK11BI GGWCC 2 cut(s) 1421, 2096
VspI ATTAAT 1 cut(s) 1029
XapI RAATTY 4 cut(s) 974, 1144, 1544, 1703
XbaI TCTAGA 2 cut(s) 394, 1415
XceI RCATGY 1 cut(s) 1775
XcmI CCANNNNNNNNNTGG 2 cut(s) 459, 1881
XmaI CCCGGG 1 cut(s) 1751
XmiI GTMKAC 3 cut(s) 87, 699, 1746
XmnI GAANNNNTTC 1 cut(s) 2075
XspI CTAG 7 cut(s) 395, 687, 1211, 1416, 1587, 1913, 1953
ZrmI AGTACT 1 cut(s) 1855
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.