Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0006761

Physical Location & Seq

Genomic Coordinates Reverse (-)

58409195 .. 58413652

Gene Structure 4458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00264920.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 738 bp

ATGGACAACAACCCCAACGCCGTCACCACCGCCGCCGCCGCCACCGCCATTACCGCCCAGCACCAGCACCAGCACCAAGCCCAGTCCGCCACCTACCCTCCCGCCCAGGGCCCGCCGTCCTCCGTCGCCGCGCCGCCGTTCCACCACCTGCTCCAGGCCCAGCAGCAGCAGCTGCAGATGTTCTGGAACTACCAGCGGCAGGAGATCGAGCAGGTCAACGACTTCAAGAATCACCAGCTCCCCTTGGCCCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCAGGATGATCTCAGCCGAGGCCCCCGTCCTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACCATCCGCTCCTGGCTCCACGCCGAGGAGAACAAACGCCGCACTCTCCAGAAAAACGACATTGCCGCCGCCATTACCAGGACCGATATTTTCGATTTCCTCGTCGATATTGTCCCCCGGGATGAGATCAAGGACGAGGCCGGCCTCGGAGGTGTCGGCATGGTGGGCACCACCGCCAGTGGGGTCCCCTACTACTACCCGCCGATTGGCCAGCCGGCCGGTGCGCCGGGAGGGATGATGATTGGGAGGCCGGCGATGGACCCCACGGGCGTTTATGGGCAGCCGCCGTCGCAGGCGTGGCAGTCGGTGTGGCAGACGGCGGCGGACGATGGGTCCTATGGGAGTGGAGGGAGCAGTGGCCAGGGCAATCTTGATGGCCAGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0005737 GO:0005829 GO:0006109 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009739 GO:0009740 GO:0009755 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010029 GO:0010033 GO:0010099 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010628 GO:0010675 GO:0010677 GO:0016602 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0032870 GO:0032881 GO:0032991 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044798 GO:0045893 GO:0045912 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0080090 GO:0090575 GO:0097305 GO:0097306 GO:0140110 GO:1900140 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000028 GO:2000030 GO:2000112 GO:2000241 GO:2000306 GO:2000904 GO:2000905 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04612 ko05152 map04612 map05152

Pfam Domains

Protein Families

CBFD_NFYB_HMF

Protein Analysis

245

Amino Acids

26.53

Weight (kDa)

5.42

Isoelectric Point (pI)

54.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Histone	PF00125	71 - 142	1e-17	Core histone H2A/H2B/H3/H4 domain
CBFD_NFYB_HMF	PF00808	79 - 142	1e-16	Histone-like transcription factor (CBF/NF-Y) and archaeal histone

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48590
fragaria_vesca	FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391
malus_domestica	MD06G1141200.v1.1 MD14G1156400.v1.1
prunus_persica	Prupe.5G150400_v2.0.a1
pyrus_communis	pycom06g13120
rosa_chinensis	RchiOBHm_Chr7g0190051
rosa_laevigata	RLG00000004568
rosa_multiflora	Rmu_sc0004886.1_g000006
rosa_roxburghii	Rroxscaffold_3G00264920
rosa_rugosa	Rorug06G0502000
rosa_samantha	Rh7AG107500 Rh7BG109800 Rh7CG112100 Rh7DG110500
rosa_wichuraiana	Rw7G009280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	156
AasI	GACNNNNNNGTC	1 cut(s)	281
AatII	GACGTC	1 cut(s)	285
Acc36I	ACCTGC	2 cut(s)	156, 202
AccB1I	GGYRCC	1 cut(s)	518
AccBSI	CCGCTC	1 cut(s)	360
AccII	CGCG	1 cut(s)	131
AcoI	YGGCCR	4 cut(s)	559, 567, 709, 727
AcyI	GRCGYC	1 cut(s)	282
AfiI	CCNNNNNNNGG	7 cut(s)	107, 154, 199, 376, 429, 531, 557
AgsI	TTSAA	1 cut(s)	226
AhdI	GACNNNNNGTC	1 cut(s)	682
AjnI	CCWGG	5 cut(s)	105, 153, 362, 428, 711
AluBI	AGCT	4 cut(s)	172, 238, 334, 349
AluI	AGCT	4 cut(s)	172, 238, 334, 349
Alw21I	GWGCWC	2 cut(s)	336, 351
AlwNI	CAGNNNCTG	1 cut(s)	172
Ama87I	CYCGRG	2 cut(s)	344, 468
ApaI	GGGCCC	1 cut(s)	113
ApeKI	GCWGC	5 cut(s)	163, 166, 169, 172, 631
AspLEI	GCGC	2 cut(s)	133, 577
AspS9I	GGNCC	9 cut(s)	109, 110, 157, 247, 304, 432, 535, 610, 684
AsuC2I	CCSGG	3 cut(s)	469, 470, 579
AsuHPI	GGTGA	3 cut(s)	16, 224, 343
AvaI	CYCGRG	2 cut(s)	344, 468
AvaII	GGWCC	4 cut(s)	432, 535, 610, 684
BaeGI	GKGCMC	2 cut(s)	113, 521
BalI	TGGCCA	3 cut(s)	561, 711, 729
BanI	GGYRCC	1 cut(s)	518
BanII	GRGCYC	3 cut(s)	113, 336, 351
Bbv12I	GWGCWC	2 cut(s)	336, 351
BbvI	GCAGC	5 cut(s)	159, 175, 178, 181, 643
BccI	CCATC	4 cut(s)	362, 601, 674, 719
BceAI	ACGGC	5 cut(s)	5, 100, 121, 622, 684
BciT130I	CCWGG	5 cut(s)	107, 155, 364, 430, 713
BcnI	CCSGG	3 cut(s)	469, 470, 579
BfmI	CTRYAG	1 cut(s)	173
BfuAI	ACCTGC	2 cut(s)	156, 202
Bme1390I	CCNGG	8 cut(s)	107, 155, 364, 430, 469, 470, 579, 713
Bme18I	GGWCC	4 cut(s)	432, 535, 610, 684
BmeRI	GACNNNNNGTC	1 cut(s)	682
BmeT110I	CYCGRG	2 cut(s)	344, 468
BmgT120I	GGNCC	9 cut(s)	109, 110, 157, 247, 304, 432, 535, 610, 684
BmiI	GGNNCC	8 cut(s)	111, 306, 368, 520, 536, 537, 612, 685
BmrFI	CCNGG	8 cut(s)	107, 155, 364, 430, 469, 470, 579, 713
BmrI	ACTGGG	1 cut(s)	76
BmsI	GCATC	1 cut(s)	261
BmuI	ACTGGG	1 cut(s)	76
BpmI	CTGGAG	2 cut(s)	137, 383
BpuMI	CCSGG	3 cut(s)	469, 470, 579
BsaHI	GRCGYC	1 cut(s)	282
BsaXI	ACNNNNNCTCC	2 cut(s)	82, 112
Bsc4I	CCNNNNNNNGG	7 cut(s)	107, 154, 199, 376, 429, 531, 557
Bse118I	RCCGGY	4 cut(s)	491, 565, 569, 601
Bse1I	ACTGG	2 cut(s)	82, 528
Bse3DI	GCAATG	1 cut(s)	411
BseBI	CCWGG	5 cut(s)	107, 155, 364, 430, 713
BseGI	GGATG	5 cut(s)	294, 339, 354, 478, 591
BseLI	CCNNNNNNNGG	7 cut(s)	107, 154, 199, 376, 429, 531, 557
BseMI	GCAATG	1 cut(s)	411
BseMII	CTCAG	1 cut(s)	309
BseNI	ACTGG	2 cut(s)	82, 528
BseRI	GAGGAG	1 cut(s)	392
BseSI	GKGCMC	2 cut(s)	113, 521
BseX3I	CGGCCG	1 cut(s)	567
BseXI	GCAGC	5 cut(s)	159, 175, 178, 181, 643
BseYI	CCCAGC	2 cut(s)	57, 159
Bsh1236I	CGCG	1 cut(s)	131
Bsh1285I	CGRYCG	1 cut(s)	570
BshNI	GGYRCC	1 cut(s)	518
BsiEI	CGRYCG	1 cut(s)	570
BsiHKAI	GWGCWC	2 cut(s)	336, 351
BsiHKCI	CYCGRG	2 cut(s)	344, 468
BsiSI	CCGG	6 cut(s)	469, 492, 566, 570, 578, 602
BslFI	GGGAC	2 cut(s)	449, 521
BslI	CCNNNNNNNGG	7 cut(s)	107, 154, 199, 376, 429, 531, 557
BsmFI	GGGAC	2 cut(s)	449, 521
BsoBI	CYCGRG	2 cut(s)	344, 468
Bsp120I	GGGCCC	1 cut(s)	109
Bsp1286I	GDGCHC	4 cut(s)	113, 336, 351, 521
Bsp143I	GATC	4 cut(s)	204, 261, 291, 477
BspCNI	CTCAG	1 cut(s)	308
BspFNI	CGCG	1 cut(s)	131
BspHI	TCATGA	1 cut(s)	264
BspLI	GGNNCC	8 cut(s)	111, 306, 368, 520, 536, 537, 612, 685
BspMAI	CTGCAG	1 cut(s)	177
BspMI	ACCTGC	2 cut(s)	156, 202
BspQI	GCTCTTC	1 cut(s)	341
BspT107I	GGYRCC	1 cut(s)	518
BsrBI	CCGCTC	1 cut(s)	360
BsrDI	GCAATG	1 cut(s)	411
BsrFI	RCCGGY	4 cut(s)	491, 565, 569, 601
BsrI	ACTGG	2 cut(s)	82, 528
BssAI	RCCGGY	4 cut(s)	491, 565, 569, 601
BssMI	GATC	4 cut(s)	204, 261, 291, 477
BssNI	GRCGYC	1 cut(s)	282
BssT1I	CCWWGG	2 cut(s)	243, 321
Bst2UI	CCWGG	5 cut(s)	107, 155, 364, 430, 713
Bst6I	CTCTTC	1 cut(s)	341
BstACI	GRCGYC	1 cut(s)	282
BstAPI	GCANNNNNTGC	1 cut(s)	172
BstC8I	GCNNGC	9 cut(s)	113, 250, 328, 332, 493, 563, 567, 603, 645
BstDEI	CTNAG	1 cut(s)	295
BstDSI	CCRYGG	1 cut(s)	615
BstENI	CCTNNNNNAGG	1 cut(s)	152
BstF5I	GGATG	5 cut(s)	294, 339, 354, 478, 591
BstFNI	CGCG	1 cut(s)	131
BstHHI	GCGC	2 cut(s)	133, 577
BstKTI	GATC	4 cut(s)	207, 264, 294, 480
BstMBI	GATC	4 cut(s)	204, 261, 291, 477
BstMCI	CGRYCG	1 cut(s)	570
BstMWI	GCNNNNNNNGC	9 cut(s)	38, 44, 53, 86, 169, 172, 516, 640, 649
BstNI	CCWGG	5 cut(s)	107, 155, 364, 430, 713
BstSCI	CCNGG	8 cut(s)	105, 153, 362, 428, 467, 468, 577, 711
BstSFI	CTRYAG	1 cut(s)	173
BstSLI	GKGCMC	2 cut(s)	113, 521
BstUI	CGCG	1 cut(s)	131
BstV1I	GCAGC	5 cut(s)	159, 175, 178, 181, 643
BstZI	CGGCCG	1 cut(s)	567
BtgI	CCRYGG	1 cut(s)	615
BtgZI	GCGATG	1 cut(s)	620
BtsCI	GGATG	5 cut(s)	294, 339, 354, 478, 591
BtsI	GCAGTG	1 cut(s)	712
BtsIMutI	CAGTG	2 cut(s)	535, 712
BveI	ACCTGC	2 cut(s)	156, 202
Cac8I	GCNNGC	9 cut(s)	113, 250, 328, 332, 493, 563, 567, 603, 645
CaiI	CAGNNNCTG	1 cut(s)	172
CciI	TCATGA	1 cut(s)	264
CfoI	GCGC	2 cut(s)	133, 577
Cfr10I	RCCGGY	4 cut(s)	491, 565, 569, 601
Cfr13I	GGNCC	9 cut(s)	109, 110, 157, 247, 304, 432, 535, 610, 684
Cfr9I	CCCGGG	1 cut(s)	468
CviAII	CATG	2 cut(s)	265, 511
DdeI	CTNAG	1 cut(s)	295
DpnI	GATC	4 cut(s)	206, 263, 293, 479
DpnII	GATC	4 cut(s)	204, 261, 291, 477
DrdI	GACNNNNNNGTC	1 cut(s)	281
DriI	GACNNNNNGTC	1 cut(s)	682
DseDI	GACNNNNNNGTC	1 cut(s)	281
EaeI	YGGCCR	4 cut(s)	559, 567, 709, 727
EagI	CGGCCG	1 cut(s)	567
Eam1104I	CTCTTC	1 cut(s)	341
Eam1105I	GACNNNNNGTC	1 cut(s)	682
EarI	CTCTTC	1 cut(s)	341
EciI	GGCGGA	2 cut(s)	76, 689
Ecl136II	GAGCTC	2 cut(s)	334, 349
EclXI	CGGCCG	1 cut(s)	567
Eco130I	CCWWGG	2 cut(s)	243, 321
Eco147I	AGGCCT	1 cut(s)	326
Eco24I	GRGCYC	3 cut(s)	113, 336, 351
Eco47I	GGWCC	4 cut(s)	432, 535, 610, 684
Eco52I	CGGCCG	1 cut(s)	567
Eco53kI	GAGCTC	2 cut(s)	334, 349
Eco88I	CYCGRG	2 cut(s)	344, 468
EcoICRI	GAGCTC	2 cut(s)	334, 349
EcoNI	CCTNNNNNAGG	1 cut(s)	152
EcoO109I	RGGNCCY	4 cut(s)	109, 304, 535, 684
EcoRII	CCWGG	5 cut(s)	105, 153, 362, 428, 711
EcoT14I	CCWWGG	2 cut(s)	243, 321
EcoT38I	GRGCYC	3 cut(s)	113, 336, 351
ErhI	CCWWGG	2 cut(s)	243, 321
FaeI	CATG	2 cut(s)	268, 514
FaiI	YATR	4 cut(s)	266, 512, 627, 690
FaqI	GGGAC	2 cut(s)	449, 521
FatI	CATG	2 cut(s)	264, 510
FauI	CCCGC	4 cut(s)	109, 120, 257, 558
FokI	GGATG	5 cut(s)	301, 326, 341, 485, 598
FriOI	GRGCYC	3 cut(s)	113, 336, 351
FseI	GGCCGGCC	1 cut(s)	495
GlaI	GCGC	2 cut(s)	132, 576
GsaI	CCCAGC	2 cut(s)	61, 163
GsuI	CTGGAG	2 cut(s)	137, 383
HapII	CCGG	6 cut(s)	469, 492, 566, 570, 578, 602
HhaI	GCGC	2 cut(s)	133, 577
Hin1I	GRCGYC	1 cut(s)	282
Hin1II	CATG	2 cut(s)	268, 514
Hin6I	GCGC	2 cut(s)	131, 575
HinP1I	GCGC	2 cut(s)	131, 575
HincII	GTYRAC	1 cut(s)	217
HindII	GTYRAC	1 cut(s)	217
HinfI	GANTC	1 cut(s)	229
HpaII	CCGG	6 cut(s)	469, 492, 566, 570, 578, 602
HphI	GGTGA	3 cut(s)	16, 224, 343
Hpy166II	GTNNAC	1 cut(s)	217
Hpy188I	TCNGA	1 cut(s)	500
Hpy188III	TCNNGA	7 cut(s)	184, 226, 256, 265, 286, 400, 722
Hpy8I	GTNNAC	1 cut(s)	217
Hpy99I	CGWCG	4 cut(s)	128, 278, 458, 643
HpyAV	CCTTC	1 cut(s)	262
HpyCH4IV	ACGT	1 cut(s)	282
HpyCH4V	TGCA	1 cut(s)	175
HpyF10VI	GCNNNNNNNGC	9 cut(s)	38, 44, 53, 86, 169, 172, 516, 640, 649
HpyF3I	CTNAG	1 cut(s)	295
HpySE526I	ACGT	1 cut(s)	282
Hsp92I	GRCGYC	1 cut(s)	282
Hsp92II	CATG	2 cut(s)	268, 514
HspAI	GCGC	2 cut(s)	131, 575
KflI	GGGWCCC	1 cut(s)	535
KroI	GCCGGC	3 cut(s)	491, 565, 601
KroNI	GCCGGC	3 cut(s)	493, 567, 603
Kzo9I	GATC	4 cut(s)	204, 261, 291, 477
LguI	GCTCTTC	1 cut(s)	341
LmnI	GCTCC	5 cut(s)	156, 243, 365, 372, 702
Lsp1109I	GCAGC	5 cut(s)	159, 175, 178, 181, 643
LweI	GCATC	1 cut(s)	261
MaeII	ACGT	1 cut(s)	282
MaeIII	GTNAC	1 cut(s)	22
MalI	GATC	4 cut(s)	206, 263, 293, 479
MbiI	CCGCTC	1 cut(s)	360
MboI	GATC	4 cut(s)	204, 261, 291, 477
MboII	GAAGA	2 cut(s)	271, 328
MhlI	GDGCHC	4 cut(s)	113, 336, 351, 521
MlsI	TGGCCA	3 cut(s)	561, 711, 729
MluNI	TGGCCA	3 cut(s)	561, 711, 729
Mox20I	TGGCCA	3 cut(s)	561, 711, 729
MroNI	GCCGGC	3 cut(s)	491, 565, 601
MscI	TGGCCA	3 cut(s)	561, 711, 729
MseI	TTAA	1 cut(s)	736
Msp20I	TGGCCA	3 cut(s)	561, 711, 729
MspA1I	CMGCKG	2 cut(s)	172, 196
MspI	CCGG	6 cut(s)	469, 492, 566, 570, 578, 602
MspR9I	CCNGG	8 cut(s)	107, 155, 364, 430, 469, 470, 579, 713
MvaI	CCWGG	5 cut(s)	107, 155, 364, 430, 713
MvnI	CGCG	1 cut(s)	131
MwoI	GCNNNNNNNGC	9 cut(s)	38, 44, 53, 86, 169, 172, 516, 640, 649
NaeI	GCCGGC	3 cut(s)	493, 567, 603
NciI	CCSGG	3 cut(s)	469, 470, 579
NdeII	GATC	4 cut(s)	204, 261, 291, 477
NgoMIV	GCCGGC	3 cut(s)	491, 565, 601
NlaIII	CATG	2 cut(s)	268, 514
NlaIV	GGNNCC	8 cut(s)	111, 306, 368, 520, 536, 537, 612, 685
NmeAIII	GCCGAG	2 cut(s)	325, 400
NmuCI	GTSAC	1 cut(s)	22
PaeR7I	CTCGAG	1 cut(s)	344
PagI	TCATGA	1 cut(s)	264
PaqCI	CACCTGC	1 cut(s)	156
PasI	CCCWGGG	1 cut(s)	106
PceI	AGGCCT	1 cut(s)	326
PciSI	GCTCTTC	1 cut(s)	341
PcsI	WCGNNNNNNNCGW	1 cut(s)	450
PdiI	GCCGGC	3 cut(s)	493, 567, 603
PfeI	GAWTC	1 cut(s)	229
PpuMI	RGGWCCY	2 cut(s)	535, 684
Psp124BI	GAGCTC	2 cut(s)	336, 351
Psp5II	RGGWCCY	2 cut(s)	535, 684
Psp6I	CCWGG	5 cut(s)	105, 153, 362, 428, 711
PspFI	CCCAGC	2 cut(s)	57, 159
PspGI	CCWGG	5 cut(s)	105, 153, 362, 428, 711
PspN4I	GGNNCC	8 cut(s)	111, 306, 368, 520, 536, 537, 612, 685
PspOMI	GGGCCC	1 cut(s)	109
PspPI	GGNCC	9 cut(s)	109, 110, 157, 247, 304, 432, 535, 610, 684
PspPPI	RGGWCCY	2 cut(s)	535, 684
PspXI	VCTCGAGB	1 cut(s)	344
PstI	CTGCAG	1 cut(s)	177
PstNI	CAGNNNCTG	1 cut(s)	172
PvuII	CAGCTG	1 cut(s)	172
RigI	GGCCGGCC	1 cut(s)	495
SacI	GAGCTC	2 cut(s)	336, 351
SapI	GCTCTTC	1 cut(s)	341
SaqAI	TTAA	1 cut(s)	736
Sau3AI	GATC	4 cut(s)	204, 261, 291, 477
Sau96I	GGNCC	9 cut(s)	109, 110, 157, 247, 304, 432, 535, 610, 684
ScrFI	CCNGG	8 cut(s)	107, 155, 364, 430, 469, 470, 579, 713
SduI	GDGCHC	4 cut(s)	113, 336, 351, 521
SetI	ASST	9 cut(s)	95, 150, 174, 216, 240, 285, 336, 351, 505
SfaNI	GCATC	1 cut(s)	261
SfcI	CTRYAG	1 cut(s)	173
Sfr274I	CTCGAG	1 cut(s)	344
SinI	GGWCC	4 cut(s)	432, 535, 610, 684
SlaI	CTCGAG	1 cut(s)	344
SmaI	CCCGGG	1 cut(s)	470
SmlI	CTYRAG	1 cut(s)	344
SmoI	CTYRAG	1 cut(s)	344
SseBI	AGGCCT	1 cut(s)	326
SstI	GAGCTC	2 cut(s)	336, 351
StuI	AGGCCT	1 cut(s)	326
StyD4I	CCNGG	8 cut(s)	105, 153, 362, 428, 467, 468, 577, 711
StyI	CCWWGG	2 cut(s)	243, 321
TaiI	ACGT	1 cut(s)	285
TaqI	TCGA	4 cut(s)	207, 345, 444, 456
TaqII	GACCGA	1 cut(s)	449
TfiI	GAWTC	1 cut(s)	229
Tru1I	TTAA	1 cut(s)	736
Tru9I	TTAA	1 cut(s)	736
TscAI	CASTG	2 cut(s)	535, 712
TseFI	GTSAC	1 cut(s)	22
TseI	GCWGC	5 cut(s)	163, 166, 169, 172, 631
Tsp45I	GTSAC	1 cut(s)	22
TspDTI	ATGAA	2 cut(s)	281, 328
TspGWI	ACGGA	1 cut(s)	112
TspMI	CCCGGG	1 cut(s)	468
TspRI	CASTG	2 cut(s)	535, 712
VpaK11BI	GGWCC	4 cut(s)	432, 535, 610, 684
XagI	CCTNNNNNAGG	1 cut(s)	152
XhoI	CTCGAG	1 cut(s)	344
XmaI	CCCGGG	1 cut(s)	468
ZraI	GACGTC	1 cut(s)	283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.