Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0006761

Physical Location & Seq

Genomic Coordinates Forward (+)

8666402 .. 8669383

Gene Structure 2982 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG112100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 732 bp

ATGGACAACAACCCCAACGCCGCCGGCACCGCCATTACCGCCCAGCACCAGCACCAGCACCAGCACCAAGCCCAGTCCGCCACCTACCCTCCCGCCCAGGGCGGCCCGCCGTCCTCCGTCGCGGCGCCGCCCTTTCACCACCTGCTCCAGGCTCAGCAGCAGCAGCTGCAGATGTTCTGGAACTACCAGCGGCAGGAGATCGAGCAGGTCAACGACTTCAAGAACCACCAGCTCCCCTTGGCCCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCAGGATGATCTCAGCCGAGGCCCCCGTCCTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACCATCCGCTCCTGGCTCCACGCCGAGGAGAACAAACGGCGCACTCTTCAGAAAAACGACATTGCGGCCGCCATTACCAGGACCGATATTTTCGATTTCCTCGTCGATATCGTCCCCCGGGATGAGATCAAGGACGAGGCCGGCCTCGGAGGTGTCGGCATGGTGGGGGCCACCGCCAGTGGGGTCCCCTACTACTACCCGCCGATTGGCCAGCCGGCCGGTGCGCCGGGAGGGATGATGATTGGGAGGCCGGCGATGGACCCCACGGGCGTTTATGCGCAGCCCCCGTCGCAGGCGTGGCAGTCGGTGTGGCAGACGGCGGCGGACGATGGGTCCTATGGGAGTGGAGGGAGCAGTGGCCAGGGCAATCTTGATGGCCAGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0005737 GO:0005829 GO:0006109 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009739 GO:0009740 GO:0009755 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010029 GO:0010033 GO:0010099 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010628 GO:0010675 GO:0010677 GO:0016602 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0032870 GO:0032881 GO:0032991 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044798 GO:0045893 GO:0045912 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0080090 GO:0090575 GO:0097305 GO:0097306 GO:0140110 GO:1900140 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000028 GO:2000030 GO:2000112 GO:2000241 GO:2000306 GO:2000904 GO:2000905 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04612 ko05152 map04612 map05152

Pfam Domains

Protein Families

CBFD_NFYB_HMF

Protein Analysis

243

Amino Acids

26.38

Weight (kDa)

5.55

Isoelectric Point (pI)

56.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Histone	PF00125	69 - 140	9.9e-18	Core histone H2A/H2B/H3/H4 domain
CBFD_NFYB_HMF	PF00808	77 - 140	1e-16	Histone-like transcription factor (CBF/NF-Y) and archaeal histone

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48590
fragaria_vesca	FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391 FvH4_5g08391
malus_domestica	MD06G1141200.v1.1 MD14G1156400.v1.1
prunus_persica	Prupe.5G150400_v2.0.a1
pyrus_communis	pycom06g13120
rosa_chinensis	RchiOBHm_Chr7g0190051
rosa_laevigata	RLG00000004568
rosa_multiflora	Rmu_sc0004886.1_g000006
rosa_roxburghii	Rroxscaffold_3G00264920
rosa_rugosa	Rorug06G0502000
rosa_samantha	Rh7AG107500 Rh7BG109800 Rh7CG112100 Rh7DG110500
rosa_wichuraiana	Rw7G009280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	150
AasI	GACNNNNNNGTC	1 cut(s)	275
AatII	GACGTC	1 cut(s)	279
Acc16I	TGCGCA	1 cut(s)	624
Acc36I	ACCTGC	2 cut(s)	150, 196
AccB1I	GGYRCC	2 cut(s)	26, 124
AccBSI	CCGCTC	1 cut(s)	354
AccII	CGCG	1 cut(s)	122
AcoI	YGGCCR	5 cut(s)	411, 553, 561, 703, 721
AcuI	CTGAAG	1 cut(s)	377
AcyI	GRCGYC	2 cut(s)	125, 276
AfiI	CCNNNNNNNGG	8 cut(s)	98, 148, 193, 370, 423, 525, 551, 637
AgsI	TTSAA	1 cut(s)	220
AhdI	GACNNNNNGTC	1 cut(s)	676
AjnI	CCWGG	5 cut(s)	96, 147, 356, 422, 705
AluBI	AGCT	4 cut(s)	166, 232, 328, 343
AluI	AGCT	4 cut(s)	166, 232, 328, 343
Alw21I	GWGCWC	2 cut(s)	330, 345
AlwNI	CAGNNNCTG	1 cut(s)	166
Ama87I	CYCGRG	2 cut(s)	338, 462
ApeKI	GCWGC	5 cut(s)	157, 160, 163, 166, 625
AspLEI	GCGC	4 cut(s)	127, 387, 571, 625
AspS9I	GGNCC	8 cut(s)	104, 241, 298, 426, 513, 529, 604, 678
AsuC2I	CCSGG	3 cut(s)	463, 464, 573
AsuHPI	GGTGA	2 cut(s)	128, 337
AvaI	CYCGRG	2 cut(s)	338, 462
AvaII	GGWCC	4 cut(s)	426, 529, 604, 678
BalI	TGGCCA	3 cut(s)	555, 705, 723
BanI	GGYRCC	2 cut(s)	26, 124
BanII	GRGCYC	2 cut(s)	330, 345
Bbv12I	GWGCWC	2 cut(s)	330, 345
BbvI	GCAGC	5 cut(s)	153, 169, 172, 175, 637
BccI	CCATC	4 cut(s)	356, 595, 668, 713
BceAI	ACGGC	3 cut(s)	94, 398, 678
BciT130I	CCWGG	5 cut(s)	98, 149, 358, 424, 707
BcnI	CCSGG	3 cut(s)	463, 464, 573
BfmI	CTRYAG	1 cut(s)	167
BfoI	RGCGCY	1 cut(s)	128
BfuAI	ACCTGC	2 cut(s)	150, 196
BlpI	GCTNAGC	1 cut(s)	153
Bme1390I	CCNGG	8 cut(s)	98, 149, 358, 424, 463, 464, 573, 707
Bme18I	GGWCC	4 cut(s)	426, 529, 604, 678
BmeRI	GACNNNNNGTC	1 cut(s)	676
BmeT110I	CYCGRG	2 cut(s)	338, 462
BmgT120I	GGNCC	8 cut(s)	104, 241, 298, 426, 513, 529, 604, 678
BmiI	GGNNCC	9 cut(s)	28, 126, 300, 362, 514, 530, 531, 606, 679
BmrFI	CCNGG	8 cut(s)	98, 149, 358, 424, 463, 464, 573, 707
BmrI	ACTGGG	1 cut(s)	67
BmsI	GCATC	1 cut(s)	255
BmuI	ACTGGG	1 cut(s)	67
BpmI	CTGGAG	1 cut(s)	131
Bpu1102I	GCTNAGC	1 cut(s)	153
BpuMI	CCSGG	3 cut(s)	463, 464, 573
BsaHI	GRCGYC	2 cut(s)	125, 276
BsaXI	ACNNNNNCTCC	2 cut(s)	73, 103
Bsc4I	CCNNNNNNNGG	8 cut(s)	98, 148, 193, 370, 423, 525, 551, 637
Bse118I	RCCGGY	5 cut(s)	23, 485, 559, 563, 595
Bse1I	ACTGG	2 cut(s)	73, 522
Bse3DI	GCAATG	1 cut(s)	405
BseBI	CCWGG	5 cut(s)	98, 149, 358, 424, 707
BseGI	GGATG	5 cut(s)	288, 333, 348, 472, 585
BseLI	CCNNNNNNNGG	8 cut(s)	98, 148, 193, 370, 423, 525, 551, 637
BseMI	GCAATG	1 cut(s)	405
BseMII	CTCAG	2 cut(s)	167, 303
BseNI	ACTGG	2 cut(s)	73, 522
BseRI	GAGGAG	1 cut(s)	386
BseX3I	CGGCCG	2 cut(s)	411, 561
BseXI	GCAGC	5 cut(s)	153, 169, 172, 175, 637
BseYI	CCCAGC	1 cut(s)	42
Bsh1236I	CGCG	1 cut(s)	122
Bsh1285I	CGRYCG	2 cut(s)	414, 564
BshNI	GGYRCC	2 cut(s)	26, 124
BsiEI	CGRYCG	2 cut(s)	414, 564
BsiHKAI	GWGCWC	2 cut(s)	330, 345
BsiHKCI	CYCGRG	2 cut(s)	338, 462
BsiSI	CCGG	7 cut(s)	24, 463, 486, 560, 564, 572, 596
BslFI	GGGAC	2 cut(s)	443, 515
BslI	CCNNNNNNNGG	8 cut(s)	98, 148, 193, 370, 423, 525, 551, 637
BsmFI	GGGAC	2 cut(s)	443, 515
BsoBI	CYCGRG	2 cut(s)	338, 462
Bsp1286I	GDGCHC	2 cut(s)	330, 345
Bsp143I	GATC	4 cut(s)	198, 255, 285, 471
Bsp1720I	GCTNAGC	1 cut(s)	153
BspCNI	CTCAG	2 cut(s)	166, 302
BspFNI	CGCG	1 cut(s)	122
BspHI	TCATGA	1 cut(s)	258
BspLI	GGNNCC	9 cut(s)	28, 126, 300, 362, 514, 530, 531, 606, 679
BspMAI	CTGCAG	1 cut(s)	171
BspMI	ACCTGC	2 cut(s)	150, 196
BspQI	GCTCTTC	1 cut(s)	335
BspT107I	GGYRCC	2 cut(s)	26, 124
BsrBI	CCGCTC	1 cut(s)	354
BsrDI	GCAATG	1 cut(s)	405
BsrFI	RCCGGY	5 cut(s)	23, 485, 559, 563, 595
BsrI	ACTGG	2 cut(s)	73, 522
BssAI	RCCGGY	5 cut(s)	23, 485, 559, 563, 595
BssMI	GATC	4 cut(s)	198, 255, 285, 471
BssNI	GRCGYC	2 cut(s)	125, 276
BssT1I	CCWWGG	2 cut(s)	237, 315
Bst2UI	CCWGG	5 cut(s)	98, 149, 358, 424, 707
Bst6I	CTCTTC	2 cut(s)	335, 396
BstACI	GRCGYC	2 cut(s)	125, 276
BstAPI	GCANNNNNTGC	1 cut(s)	166
BstDEI	CTNAG	2 cut(s)	153, 289
BstDSI	CCRYGG	1 cut(s)	609
BstENI	CCTNNNNNAGG	1 cut(s)	146
BstF5I	GGATG	5 cut(s)	288, 333, 348, 472, 585
BstFNI	CGCG	1 cut(s)	122
BstH2I	RGCGCY	1 cut(s)	128
BstHHI	GCGC	4 cut(s)	127, 387, 571, 625
BstKTI	GATC	4 cut(s)	201, 258, 288, 474
BstMBI	GATC	4 cut(s)	198, 255, 285, 471
BstMCI	CGRYCG	2 cut(s)	414, 564
BstMWI	GCNNNNNNNGC	7 cut(s)	29, 38, 77, 163, 166, 634, 643
BstNI	CCWGG	5 cut(s)	98, 149, 358, 424, 707
BstSCI	CCNGG	8 cut(s)	96, 147, 356, 422, 461, 462, 571, 705
BstSFI	CTRYAG	1 cut(s)	167
BstUI	CGCG	1 cut(s)	122
BstV1I	GCAGC	5 cut(s)	153, 169, 172, 175, 637
BstZI	CGGCCG	2 cut(s)	411, 561
BtgI	CCRYGG	1 cut(s)	609
BtgZI	GCGATG	1 cut(s)	614
BtsCI	GGATG	5 cut(s)	288, 333, 348, 472, 585
BtsI	GCAGTG	1 cut(s)	706
BtsIMutI	CAGTG	2 cut(s)	529, 706
BveI	ACCTGC	2 cut(s)	150, 196
CaiI	CAGNNNCTG	1 cut(s)	166
CciI	TCATGA	1 cut(s)	258
CciNI	GCGGCCGC	1 cut(s)	411
CfoI	GCGC	4 cut(s)	127, 387, 571, 625
Cfr10I	RCCGGY	5 cut(s)	23, 485, 559, 563, 595
Cfr13I	GGNCC	8 cut(s)	104, 241, 298, 426, 513, 529, 604, 678
Cfr9I	CCCGGG	1 cut(s)	462
CviAII	CATG	2 cut(s)	259, 505
DdeI	CTNAG	2 cut(s)	153, 289
DinI	GGCGCC	1 cut(s)	126
DpnI	GATC	4 cut(s)	200, 257, 287, 473
DpnII	GATC	4 cut(s)	198, 255, 285, 471
DrdI	GACNNNNNNGTC	1 cut(s)	275
DriI	GACNNNNNGTC	1 cut(s)	676
DseDI	GACNNNNNNGTC	1 cut(s)	275
EaeI	YGGCCR	5 cut(s)	411, 553, 561, 703, 721
EagI	CGGCCG	2 cut(s)	411, 561
Eam1104I	CTCTTC	2 cut(s)	335, 396
Eam1105I	GACNNNNNGTC	1 cut(s)	676
EarI	CTCTTC	2 cut(s)	335, 396
EciI	GGCGGA	2 cut(s)	67, 683
Ecl136II	GAGCTC	2 cut(s)	328, 343
EclXI	CGGCCG	2 cut(s)	411, 561
Eco130I	CCWWGG	2 cut(s)	237, 315
Eco147I	AGGCCT	1 cut(s)	320
Eco24I	GRGCYC	2 cut(s)	330, 345
Eco32I	GATATC	1 cut(s)	454
Eco47I	GGWCC	4 cut(s)	426, 529, 604, 678
Eco52I	CGGCCG	2 cut(s)	411, 561
Eco53kI	GAGCTC	2 cut(s)	328, 343
Eco57I	CTGAAG	1 cut(s)	377
Eco88I	CYCGRG	2 cut(s)	338, 462
EcoICRI	GAGCTC	2 cut(s)	328, 343
EcoNI	CCTNNNNNAGG	1 cut(s)	146
EcoO109I	RGGNCCY	3 cut(s)	298, 529, 678
EcoRII	CCWGG	5 cut(s)	96, 147, 356, 422, 705
EcoRV	GATATC	1 cut(s)	454
EcoT14I	CCWWGG	2 cut(s)	237, 315
EcoT38I	GRGCYC	2 cut(s)	330, 345
EgeI	GGCGCC	1 cut(s)	126
EheI	GGCGCC	1 cut(s)	126
ErhI	CCWWGG	2 cut(s)	237, 315
FaeI	CATG	2 cut(s)	262, 508
FaiI	YATR	4 cut(s)	260, 506, 621, 684
FaqI	GGGAC	2 cut(s)	443, 515
FatI	CATG	2 cut(s)	258, 504
FauI	CCCGC	4 cut(s)	100, 114, 251, 552
FokI	GGATG	5 cut(s)	295, 320, 335, 479, 592
FriOI	GRGCYC	2 cut(s)	330, 345
FseI	GGCCGGCC	1 cut(s)	489
FspI	TGCGCA	1 cut(s)	624
GlaI	GCGC	4 cut(s)	126, 386, 570, 624
GsaI	CCCAGC	1 cut(s)	46
GsuI	CTGGAG	1 cut(s)	131
HaeII	RGCGCY	1 cut(s)	128
HapII	CCGG	7 cut(s)	24, 463, 486, 560, 564, 572, 596
HhaI	GCGC	4 cut(s)	127, 387, 571, 625
Hin1I	GRCGYC	2 cut(s)	125, 276
Hin1II	CATG	2 cut(s)	262, 508
Hin6I	GCGC	4 cut(s)	125, 385, 569, 623
HinP1I	GCGC	4 cut(s)	125, 385, 569, 623
HincII	GTYRAC	1 cut(s)	211
HindII	GTYRAC	1 cut(s)	211
HpaII	CCGG	7 cut(s)	24, 463, 486, 560, 564, 572, 596
HphI	GGTGA	2 cut(s)	128, 337
Hpy166II	GTNNAC	1 cut(s)	211
Hpy188I	TCNGA	2 cut(s)	396, 494
Hpy188III	TCNNGA	6 cut(s)	178, 220, 250, 259, 280, 716
Hpy8I	GTNNAC	1 cut(s)	211
Hpy99I	CGWCG	4 cut(s)	122, 272, 452, 637
HpyAV	CCTTC	1 cut(s)	256
HpyCH4IV	ACGT	1 cut(s)	276
HpyCH4V	TGCA	1 cut(s)	169
HpyF10VI	GCNNNNNNNGC	7 cut(s)	29, 38, 77, 163, 166, 634, 643
HpyF3I	CTNAG	2 cut(s)	153, 289
HpySE526I	ACGT	1 cut(s)	276
Hsp92I	GRCGYC	2 cut(s)	125, 276
Hsp92II	CATG	2 cut(s)	262, 508
HspAI	GCGC	4 cut(s)	125, 385, 569, 623
KasI	GGCGCC	1 cut(s)	124
KflI	GGGWCCC	1 cut(s)	529
KroI	GCCGGC	4 cut(s)	23, 485, 559, 595
KroNI	GCCGGC	4 cut(s)	25, 487, 561, 597
Kzo9I	GATC	4 cut(s)	198, 255, 285, 471
LguI	GCTCTTC	1 cut(s)	335
LmnI	GCTCC	5 cut(s)	150, 237, 359, 366, 696
Lsp1109I	GCAGC	5 cut(s)	153, 169, 172, 175, 637
LweI	GCATC	1 cut(s)	255
MaeII	ACGT	1 cut(s)	276
MalI	GATC	4 cut(s)	200, 257, 287, 473
MbiI	CCGCTC	1 cut(s)	354
MboI	GATC	4 cut(s)	198, 255, 285, 471
MboII	GAAGA	3 cut(s)	265, 322, 383
MhlI	GDGCHC	2 cut(s)	330, 345
MlsI	TGGCCA	3 cut(s)	555, 705, 723
MluNI	TGGCCA	3 cut(s)	555, 705, 723
Mly113I	GGCGCC	1 cut(s)	125
Mox20I	TGGCCA	3 cut(s)	555, 705, 723
MroNI	GCCGGC	4 cut(s)	23, 485, 559, 595
MscI	TGGCCA	3 cut(s)	555, 705, 723
MseI	TTAA	1 cut(s)	730
Msp20I	TGGCCA	3 cut(s)	555, 705, 723
MspA1I	CMGCKG	2 cut(s)	166, 190
MspI	CCGG	7 cut(s)	24, 463, 486, 560, 564, 572, 596
MspR9I	CCNGG	8 cut(s)	98, 149, 358, 424, 463, 464, 573, 707
MvaI	CCWGG	5 cut(s)	98, 149, 358, 424, 707
MvnI	CGCG	1 cut(s)	122
MwoI	GCNNNNNNNGC	7 cut(s)	29, 38, 77, 163, 166, 634, 643
NaeI	GCCGGC	4 cut(s)	25, 487, 561, 597
NarI	GGCGCC	1 cut(s)	125
NciI	CCSGG	3 cut(s)	463, 464, 573
NdeII	GATC	4 cut(s)	198, 255, 285, 471
NgoMIV	GCCGGC	4 cut(s)	23, 485, 559, 595
NlaIII	CATG	2 cut(s)	262, 508
NlaIV	GGNNCC	9 cut(s)	28, 126, 300, 362, 514, 530, 531, 606, 679
NmeAIII	GCCGAG	2 cut(s)	319, 394
NotI	GCGGCCGC	1 cut(s)	411
NsbI	TGCGCA	1 cut(s)	624
PaeR7I	CTCGAG	1 cut(s)	338
PagI	TCATGA	1 cut(s)	258
PaqCI	CACCTGC	1 cut(s)	150
PasI	CCCWGGG	1 cut(s)	97
PceI	AGGCCT	1 cut(s)	320
PciSI	GCTCTTC	1 cut(s)	335
PcsI	WCGNNNNNNNCGW	2 cut(s)	444, 453
PdiI	GCCGGC	4 cut(s)	25, 487, 561, 597
PluTI	GGCGCC	1 cut(s)	128
PpuMI	RGGWCCY	2 cut(s)	529, 678
Psp124BI	GAGCTC	2 cut(s)	330, 345
Psp5II	RGGWCCY	2 cut(s)	529, 678
Psp6I	CCWGG	5 cut(s)	96, 147, 356, 422, 705
PspFI	CCCAGC	1 cut(s)	42
PspGI	CCWGG	5 cut(s)	96, 147, 356, 422, 705
PspN4I	GGNNCC	9 cut(s)	28, 126, 300, 362, 514, 530, 531, 606, 679
PspPI	GGNCC	8 cut(s)	104, 241, 298, 426, 513, 529, 604, 678
PspPPI	RGGWCCY	2 cut(s)	529, 678
PspXI	VCTCGAGB	1 cut(s)	338
PstI	CTGCAG	1 cut(s)	171
PstNI	CAGNNNCTG	1 cut(s)	166
PvuII	CAGCTG	1 cut(s)	166
RigI	GGCCGGCC	1 cut(s)	489
SacI	GAGCTC	2 cut(s)	330, 345
SapI	GCTCTTC	1 cut(s)	335
SaqAI	TTAA	1 cut(s)	730
Sau3AI	GATC	4 cut(s)	198, 255, 285, 471
Sau96I	GGNCC	8 cut(s)	104, 241, 298, 426, 513, 529, 604, 678
ScrFI	CCNGG	8 cut(s)	98, 149, 358, 424, 463, 464, 573, 707
SduI	GDGCHC	2 cut(s)	330, 345
SetI	ASST	9 cut(s)	86, 144, 168, 210, 234, 279, 330, 345, 499
SfaNI	GCATC	1 cut(s)	255
SfcI	CTRYAG	1 cut(s)	167
SfoI	GGCGCC	1 cut(s)	126
Sfr274I	CTCGAG	1 cut(s)	338
SinI	GGWCC	4 cut(s)	426, 529, 604, 678
SlaI	CTCGAG	1 cut(s)	338
SmaI	CCCGGG	1 cut(s)	464
SmlI	CTYRAG	1 cut(s)	338
SmoI	CTYRAG	1 cut(s)	338
SseBI	AGGCCT	1 cut(s)	320
SspDI	GGCGCC	1 cut(s)	124
SstI	GAGCTC	2 cut(s)	330, 345
StuI	AGGCCT	1 cut(s)	320
StyD4I	CCNGG	8 cut(s)	96, 147, 356, 422, 461, 462, 571, 705
StyI	CCWWGG	2 cut(s)	237, 315
TaiI	ACGT	1 cut(s)	279
TaqI	TCGA	4 cut(s)	201, 339, 438, 450
TaqII	GACCGA	1 cut(s)	443
TauI	GCSGC	8 cut(s)	23, 105, 125, 130, 193, 413, 416, 668
Tru1I	TTAA	1 cut(s)	730
Tru9I	TTAA	1 cut(s)	730
TscAI	CASTG	2 cut(s)	529, 706
TseI	GCWGC	5 cut(s)	157, 160, 163, 166, 625
TspDTI	ATGAA	2 cut(s)	275, 322
TspGWI	ACGGA	1 cut(s)	106
TspMI	CCCGGG	1 cut(s)	462
TspRI	CASTG	2 cut(s)	529, 706
VpaK11BI	GGWCC	4 cut(s)	426, 529, 604, 678
XagI	CCTNNNNNAGG	1 cut(s)	146
XhoI	CTCGAG	1 cut(s)	338
XmaI	CCCGGG	1 cut(s)	462
ZraI	GACGTC	1 cut(s)	277

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.