Rorug06G0502000

Nuclear transcription factor Y subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0006761
Physical Location & Seq
Reverse (-)
61663184 .. 61665310
2127 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0502000.1

Sequence Viewer

Length: 1893 bp
ATGGCTGCACCAGCTAGAGCCCTAAACCCATTTCACACGTCTACCAATCACTCTCAAGTGACCTTCATAACCTCCCTTCTGCAAACCCTAAACCCACAGACACCTAACCCCTCAAACCTCAGCTCAGCCCCTCTTAACCAGTTCTCACCTCACCTAAACCCAGCCCTAGTTGTCCAAGTCCTCCACAACCAGACCAATCCCTACCACGCCCTCTTCTTCTTCAAATGGGCATCAAACCCTGACCCCAATCCCAACAACTACTCCCACACCTTCAAATGCTACTCGGCCATCACTGACATCCTCCTCTCCCACTCCCTCTTCTCCTCCGCCTCGTCACTCCTCCAAGAATCCAATCACCTCTCTGATTTTCTGATCGGCAAGTTCATCACAGCTCACGGCCGCCGCCGCGGTGTGAGGGCCGCCATTGATTGGTTTCACAAGGCGAAAGTGATTGAGAATGGGAGGTGCTTGTTTTCTTACAATGCAATTCTGGGTGTGTTGGTTAGAGCACATAGGATTGGTTTAGCTGAGTCAATTTATGATCTGATTTTCAAGGAAGGTCTGGTGAAACCGGATGCGTCGACTTATACCATAATGATTAGAGGGTTTTGTAAAGTGGGTGAGATTGAGAATGCACAGAAGGTGTTCGATGAAATGACTTGTGAGCCGAATTTGATTACTTACAATACTATGATTCATGGGTTCTGCAAGAAGGGTGAGGTTGATAGTGCGAGGAGAGTTTTGGGTCAGATGATGGAGGGTAACGATTGCTTGCCTGATACGGTAACTTATACGACTTTGATTGATGGGTATAGTAAGAAAGGTGAGTTGGGCGAGGCAATGAAGTGTATGGATGAGATGGTGAAACAGGGTTGTGAGCCTAATGTGTTGACGTACAATGCGGTGATTCATGGTTTTTGTTTGAGTGGGAATGTTAATGAGGCAAAGAGGATGATGACGAGGATGAGGTTGAATGGTGTGAAGGATGATATAGCAACGCATACGAGTATATTGAAAGGGCTTTGCATTGCGGGGAAGGCTGATGAAGCTGTTGAGCATCTTAAAGAGATGGCCAGACTTGGGATGAAACTGGATGTGAAAGCATATGGAATTGTTGTCAATGAGTATTGTAAGATGAAAGAACCGGATGGAGCAATTTTGCTTTTAATGGAAATGAGAATGAGAGGCCTGAAGCCAAGTGTTTCGAGCTTTAATGCAGTGCTGAGTGTTCTTCTTGAAAATGGGGAGCTCGAAAGAGCCATTAATCTTGTAAAGCAAATGCCACAAATGGGTTGCTTTCCCAATTTCTTTTCATACAACTCAGTGATATTTAGTCTTTGTAATGTGAGAGGTAGAATGGGGGAAGTTGAAGGGCTTATCCATGACATGCTTCGAAATGGTCATGCCCTTGATGCCACGCTCTGTAGTTGCTTGGTCAAAGGTTATTGTGATGATGGTGATTTGAGAAGCGCAATGCAGGTTTTCTGTGACGCACTTGATCAGAGGTACATTATTAGTTTGGAGAGCTTTTCAGTTTTCGTCAAAGAGTTATGCGCCAAGGGGAAGGCTGTTGAGGCTGAGAGGATGTTTGAGGATATGTGTAAAAGATGCAGTGTGGTTCATATAGATATTTACAGAAAGACATCTTTTATAACAGAGAAGGAGAATCTTTGCCTCTATGGATTTCCAAGCGAGCAGTGGGAAGTTAATTTGCCTGCAGAGGAGGTTCCTCCAGAGCTTCCAGAACCAACACTTGGCATCAACTTTGCCAGAGATGGGATGCAAAAGATGGAGTGGTTATGCTTGGTAGCTCTCTACAGTGATACATGGTTACTTTCTGTGACAATCCGCAATGGATATGATCCGTGTCCTGACTCCGAAAGAAACATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0005737 GO:0005829 GO:0006109 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009739 GO:0009740 GO:0009755 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010029 GO:0010033 GO:0010099 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010628 GO:0010675 GO:0010677 GO:0016602 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0032870 GO:0032881 GO:0032991 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044798 GO:0045893 GO:0045912 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0080090 GO:0090575 GO:0097305 GO:0097306 GO:0140110 GO:1900140 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000028 GO:2000030 GO:2000112 GO:2000241 GO:2000306 GO:2000904 GO:2000905 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04612 ko05152 map04612 map05152
Pfam Domains
Protein Families
CBFD_NFYB_HMF

Protein Analysis

630

Amino Acids

70.61

Weight (kDa)

6.16

Isoelectric Point (pI)

28.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 157 - 205 2.6e-09 PPR repeat family
PPR_1 PF12854 189 - 220 7e-12 PPR repeat
PPR_3 PF13812 189 - 234 1.4e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 191 - 220 2.3e-07 PPR repeat family
PPR PF01535 194 - 220 2.9e-07 PPR repeat
PPR_1 PF12854 220 - 251 4.4e-14 PPR repeat
PPR_2 PF13041 223 - 270 1.6e-14 PPR repeat family
PPR PF01535 226 - 253 2.3e-07 PPR repeat
PPR_3 PF13812 252 - 304 2.5e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 256 - 288 5.4e-11 PPR repeat
PPR_2 PF13041 259 - 307 6.5e-20 PPR repeat family
PPR PF01535 262 - 292 3.2e-09 PPR repeat
PPR_1 PF12854 291 - 323 3.3e-12 PPR repeat
PPR_2 PF13041 294 - 342 5.4e-12 PPR repeat family
TPR_24 PF23276 298 - 385 1e-06 Fungal tetratrico peptide repeats
PPR_long PF17177 313 - 418 7.3e-06 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 325 - 357 6.8e-06 PPR repeat
PPR_2 PF13041 330 - 378 1.7e-07 PPR repeat family
PPR_3 PF13812 354 - 411 1.4e-06 Pentatricopeptide repeat domain
PPR_3 PF13812 388 - 443 6.9e-09 Pentatricopeptide repeat domain
PPR_2 PF13041 399 - 448 7.7e-11 PPR repeat family
Alfin PF12165 552 - 617 1.1e-31 Alfin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1652
Acc36I ACCTGC 1 cut(s) 1468
AccB7I CCANNNNNTGG 2 cut(s) 429, 1754
AccI GTMKAC 2 cut(s) 41, 581
AccII CGCG 1 cut(s) 408
AciI CCGC 9 cut(s) 327, 400, 403, 406, 408, 420, 902, 1031, 1849
AclWI GGATC 1 cut(s) 1856
AcoI YGGCCR 3 cut(s) 285, 397, 1071
AcsI RAATTY 1 cut(s) 670
AcuI CTGAAG 1 cut(s) 1211
AfaI GTAC 2 cut(s) 896, 1508
AfiI CCNNNNNNNGG 5 cut(s) 429, 1080, 1289, 1754, 1776
AflIII ACRYGT 2 cut(s) 36, 1887
AgsI TTSAA 7 cut(s) 223, 274, 553, 973, 1015, 1238, 1370
AjiI CACGTC 1 cut(s) 39
AjuI GAANNNNNNNTTGG 4 cut(s) 812, 844, 1737, 1769
Alw21I GWGCWC 2 cut(s) 511, 1251
AlwI GGATC 1 cut(s) 1856
AoxI GGCC 5 cut(s) 285, 397, 417, 1071, 1186
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 670
AseI ATTAAT 1 cut(s) 1263
Asp700I GAANNNNTTC 1 cut(s) 644
AspLEI GCGC 2 cut(s) 1472, 1556
AspS9I GGNCC 1 cut(s) 417
AsuII TTCGAA 1 cut(s) 1393
BalI TGGCCA 1 cut(s) 1073
BanII GRGCYC 2 cut(s) 22, 1251
Bbv12I GWGCWC 2 cut(s) 511, 1251
BbvCI CCTCAGC 1 cut(s) 119
BccI CCATC 9 cut(s) 296, 748, 800, 853, 1063, 1142, 1448, 1769, 1783
BceAI ACGGC 1 cut(s) 412
BclI TGATCA 1 cut(s) 1498
BfaI CTAG 2 cut(s) 15, 167
BfmI CTRYAG 3 cut(s) 1423, 1716, 1816
BfuAI ACCTGC 1 cut(s) 1468
BisI GCNGC 5 cut(s) 6, 400, 403, 406, 420
BlpI GCTNAGC 1 cut(s) 124
BlsI GCNGC 5 cut(s) 7, 401, 404, 407, 421
BmgBI CACGTC 1 cut(s) 39
BmgT120I GGNCC 1 cut(s) 417
BmiI GGNNCC 1 cut(s) 1728
BmsI GCATC 7 cut(s) 239, 565, 1066, 1402, 1598, 1767, 1770
BpmI CTGGAG 1 cut(s) 1716
Bpu10I CCTNAGC 1 cut(s) 119
Bpu1102I GCTNAGC 1 cut(s) 124
Bpu14I TTCGAA 1 cut(s) 1393
BpuEI CTTGAG 1 cut(s) 39
BsaJI CCNNGG 2 cut(s) 406, 1557
BsaWI WCCGGW 2 cut(s) 571, 1144
BsaXI ACNNNNNCTCC 2 cut(s) 245, 275
Bsc4I CCNNNNNNNGG 5 cut(s) 429, 1080, 1289, 1754, 1776
Bse1I ACTGG 2 cut(s) 139, 1095
Bse3DI GCAATG 4 cut(s) 846, 1026, 1479, 1858
BseDI CCNNGG 2 cut(s) 406, 1557
BseLI CCNNNNNNNGG 5 cut(s) 429, 1080, 1289, 1754, 1776
BseMI GCAATG 4 cut(s) 846, 1026, 1479, 1858
BseMII CTCAG 6 cut(s) 133, 138, 519, 1214, 1335, 1569
BseNI ACTGG 2 cut(s) 139, 1095
BseRI GAGGAG 5 cut(s) 293, 313, 329, 748, 1736
BseX3I CGGCCG 1 cut(s) 397
BseYI CCCAGC 1 cut(s) 160
Bsh1236I CGCG 1 cut(s) 408
Bsh1285I CGRYCG 1 cut(s) 400
BshFI GGCC 5 cut(s) 287, 399, 419, 1073, 1188
BsiEI CGRYCG 1 cut(s) 400
BsiHKAI GWGCWC 2 cut(s) 511, 1251
BsiSI CCGG 2 cut(s) 572, 1145
BslI CCNNNNNNNGG 5 cut(s) 429, 1080, 1289, 1754, 1776
BsmI GAATGC 1 cut(s) 637
BsnI GGCC 5 cut(s) 287, 399, 419, 1073, 1188
Bsp119I TTCGAA 1 cut(s) 1393
Bsp1286I GDGCHC 3 cut(s) 22, 511, 1251
Bsp143I GATC 4 cut(s) 372, 541, 1498, 1861
Bsp1720I GCTNAGC 1 cut(s) 124
BspACI CCGC 9 cut(s) 327, 400, 403, 406, 408, 420, 902, 1031, 1849
BspANI GGCC 5 cut(s) 287, 399, 419, 1073, 1188
BspCNI CTCAG 6 cut(s) 132, 137, 520, 1215, 1334, 1570
BspFNI CGCG 1 cut(s) 408
BspLI GGNNCC 1 cut(s) 1728
BspMAI CTGCAG 1 cut(s) 1720
BspMI ACCTGC 1 cut(s) 1468
BspPI GGATC 1 cut(s) 1856
BspT104I TTCGAA 1 cut(s) 1393
BsrDI GCAATG 4 cut(s) 846, 1026, 1479, 1858
BsrI ACTGG 2 cut(s) 139, 1095
BssECI CCNNGG 2 cut(s) 406, 1557
BssMI GATC 4 cut(s) 372, 541, 1498, 1861
BssT1I CCWWGG 1 cut(s) 1557
Bst4CI ACNGT 2 cut(s) 784, 1820
Bst6I CTCTTC 2 cut(s) 218, 323
BstBI TTCGAA 1 cut(s) 1393
BstC8I GCNNGC 3 cut(s) 773, 1694, 1716
BstDEI CTNAG 6 cut(s) 119, 124, 528, 1223, 1321, 1578
BstDSI CCRYGG 1 cut(s) 406
BstFNI CGCG 1 cut(s) 408
BstHHI GCGC 2 cut(s) 1472, 1556
BstKTI GATC 4 cut(s) 375, 544, 1501, 1864
BstMBI GATC 4 cut(s) 372, 541, 1498, 1861
BstMCI CGRYCG 1 cut(s) 400
BstMWI GCNNNNNNNGC 6 cut(s) 11, 405, 1037, 1046, 1412, 1574
BstNSI RCATGY 2 cut(s) 1390, 1891
BstSFI CTRYAG 3 cut(s) 1423, 1716, 1816
BstUI CGCG 1 cut(s) 408
BstZI CGGCCG 1 cut(s) 397
BsuRI GGCC 5 cut(s) 287, 399, 419, 1073, 1188
BtgI CCRYGG 1 cut(s) 406
BtrI CACGTC 1 cut(s) 39
BtsI GCAGTG 3 cut(s) 1224, 1618, 1703
BtsIMutI CAGTG 6 cut(s) 291, 1224, 1329, 1618, 1703, 1825
BveI ACCTGC 1 cut(s) 1468
Cac8I GCNNGC 3 cut(s) 773, 1694, 1716
CfoI GCGC 2 cut(s) 1472, 1556
Cfr13I GGNCC 1 cut(s) 417
Cfr42I CCGCGG 1 cut(s) 409
CseI GACGC 2 cut(s) 567, 1499
Csp6I GTAC 2 cut(s) 895, 1507
CviAII CATG 7 cut(s) 698, 911, 1382, 1387, 1403, 1827, 1888
CviQI GTAC 2 cut(s) 895, 1507
DdeI CTNAG 6 cut(s) 119, 124, 528, 1223, 1321, 1578
DpnI GATC 4 cut(s) 374, 543, 1500, 1863
DpnII GATC 4 cut(s) 372, 541, 1498, 1861
EaeI YGGCCR 3 cut(s) 285, 397, 1071
EagI CGGCCG 1 cut(s) 397
Eam1104I CTCTTC 2 cut(s) 218, 323
EarI CTCTTC 2 cut(s) 218, 323
EciI GGCGGA 1 cut(s) 316
Ecl136II GAGCTC 1 cut(s) 1249
EclXI CGGCCG 1 cut(s) 397
Eco130I CCWWGG 1 cut(s) 1557
Eco147I AGGCCT 1 cut(s) 1188
Eco24I GRGCYC 2 cut(s) 22, 1251
Eco52I CGGCCG 1 cut(s) 397
Eco53kI GAGCTC 1 cut(s) 1249
Eco57I CTGAAG 1 cut(s) 1211
EcoICRI GAGCTC 1 cut(s) 1249
EcoT14I CCWWGG 1 cut(s) 1557
EcoT38I GRGCYC 2 cut(s) 22, 1251
ErhI CCWWGG 1 cut(s) 1557
FaeI CATG 7 cut(s) 701, 914, 1385, 1390, 1406, 1830, 1891
FatI CATG 7 cut(s) 697, 910, 1381, 1386, 1402, 1826, 1887
FauI CCCGC 1 cut(s) 1024
FauNDI CATATG 1 cut(s) 1105
FbaI TGATCA 1 cut(s) 1498
FblI GTMKAC 2 cut(s) 41, 581
Fnu4HI GCNGC 5 cut(s) 6, 400, 403, 406, 420
FriOI GRGCYC 2 cut(s) 22, 1251
Fsp4HI GCNGC 5 cut(s) 6, 400, 403, 406, 420
FspBI CTAG 2 cut(s) 15, 167
GlaI GCGC 2 cut(s) 1471, 1555
GluI GCNGC 5 cut(s) 6, 400, 403, 406, 420
GsaI CCCAGC 1 cut(s) 164
GsuI CTGGAG 1 cut(s) 1716
HaeIII GGCC 5 cut(s) 287, 399, 419, 1073, 1188
HapII CCGG 2 cut(s) 572, 1145
HgaI GACGC 2 cut(s) 567, 1499
HhaI GCGC 2 cut(s) 1472, 1556
Hin1II CATG 7 cut(s) 701, 914, 1385, 1390, 1406, 1830, 1891
Hin6I GCGC 2 cut(s) 1470, 1554
HinP1I GCGC 2 cut(s) 1470, 1554
HincII GTYRAC 2 cut(s) 582, 891
HindII GTYRAC 2 cut(s) 582, 891
HinfI GANTC 6 cut(s) 347, 530, 694, 907, 1666, 1874
HpaII CCGG 2 cut(s) 572, 1145
Hpy166II GTNNAC 3 cut(s) 42, 582, 891
Hpy188I TCNGA 6 cut(s) 364, 372, 546, 750, 1503, 1879
Hpy188III TCNNGA 4 cut(s) 1235, 1733, 1742, 1871
Hpy8I GTNNAC 3 cut(s) 42, 582, 891
Hpy99I CGWCG 1 cut(s) 583
HpyCH4III ACNGT 2 cut(s) 784, 1820
HpyCH4IV ACGT 2 cut(s) 38, 893
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 405, 1037, 1046, 1412, 1574
HpyF3I CTNAG 6 cut(s) 119, 124, 528, 1223, 1321, 1578
HpySE526I ACGT 2 cut(s) 38, 893
Hsp92II CATG 7 cut(s) 701, 914, 1385, 1390, 1406, 1830, 1891
HspAI GCGC 2 cut(s) 1470, 1554
Ksp22I TGATCA 1 cut(s) 1498
KspI CCGCGG 1 cut(s) 409
Kzo9I GATC 4 cut(s) 372, 541, 1498, 1861
LmnI GCTCC 2 cut(s) 1151, 1246
LweI GCATC 7 cut(s) 239, 565, 1066, 1402, 1598, 1767, 1770
MaeI CTAG 2 cut(s) 15, 167
MaeII ACGT 2 cut(s) 38, 893
MaeIII GTNAC 7 cut(s) 58, 333, 761, 784, 1487, 1830, 1840
MalI GATC 4 cut(s) 374, 543, 1500, 1863
MboI GATC 4 cut(s) 372, 541, 1498, 1861
MboII GAAGA 5 cut(s) 205, 208, 211, 310, 1223
MhlI GDGCHC 3 cut(s) 22, 511, 1251
MlsI TGGCCA 1 cut(s) 1073
MluCI AATT 7 cut(s) 486, 534, 670, 1110, 1155, 1303, 1708
MluNI TGGCCA 1 cut(s) 1073
MlyI GAGTC 2 cut(s) 539, 1868
Mox20I TGGCCA 1 cut(s) 1073
MroXI GAANNNNTTC 1 cut(s) 644
MscI TGGCCA 1 cut(s) 1073
MseI TTAA 7 cut(s) 135, 936, 1062, 1166, 1212, 1263, 1707
Msp20I TGGCCA 1 cut(s) 1073
MspA1I CMGCKG 1 cut(s) 408
MspI CCGG 2 cut(s) 572, 1145
Mva1269I GAATGC 1 cut(s) 637
MvnI CGCG 1 cut(s) 408
MwoI GCNNNNNNNGC 6 cut(s) 11, 405, 1037, 1046, 1412, 1574
NdeI CATATG 1 cut(s) 1105
NdeII GATC 4 cut(s) 372, 541, 1498, 1861
NlaIII CATG 7 cut(s) 701, 914, 1385, 1390, 1406, 1830, 1891
NlaIV GGNNCC 1 cut(s) 1728
NmeAIII GCCGAG 1 cut(s) 263
NmuCI GTSAC 4 cut(s) 58, 333, 1487, 1840
NspI RCATGY 2 cut(s) 1390, 1891
NspV TTCGAA 1 cut(s) 1393
PceI AGGCCT 1 cut(s) 1188
PciI ACATGT 1 cut(s) 1887
PctI GAATGC 1 cut(s) 637
PdmI GAANNNNTTC 1 cut(s) 644
PfeI GAWTC 4 cut(s) 347, 694, 907, 1666
PflMI CCANNNNNTGG 2 cut(s) 429, 1754
PkrI GCNGC 5 cut(s) 7, 401, 404, 407, 421
PleI GAGTC 2 cut(s) 538, 1868
PpsI GAGTC 2 cut(s) 538, 1868
PscI ACATGT 1 cut(s) 1887
PshBI ATTAAT 1 cut(s) 1263
PsiI TTATAA 1 cut(s) 1652
Psp124BI GAGCTC 1 cut(s) 1251
PspFI CCCAGC 1 cut(s) 160
PspN4I GGNNCC 1 cut(s) 1728
PspPI GGNCC 1 cut(s) 417
PstI CTGCAG 1 cut(s) 1720
RsaI GTAC 2 cut(s) 896, 1508
RsaNI GTAC 2 cut(s) 895, 1507
SacI GAGCTC 1 cut(s) 1251
SacII CCGCGG 1 cut(s) 409
SalI GTCGAC 1 cut(s) 580
SaqAI TTAA 7 cut(s) 135, 936, 1062, 1166, 1212, 1263, 1707
SatI GCNGC 5 cut(s) 6, 400, 403, 406, 420
Sau3AI GATC 4 cut(s) 372, 541, 1498, 1861
Sau96I GGNCC 1 cut(s) 417
SchI GAGTC 2 cut(s) 539, 1868
SduI GDGCHC 3 cut(s) 22, 511, 1251
SfaNI GCATC 7 cut(s) 239, 565, 1066, 1402, 1598, 1767, 1770
SfcI CTRYAG 3 cut(s) 1423, 1716, 1816
Sfr303I CCGCGG 1 cut(s) 409
SfuI TTCGAA 1 cut(s) 1393
SgrBI CCGCGG 1 cut(s) 409
SmlI CTYRAG 1 cut(s) 54
SmoI CTYRAG 1 cut(s) 54
Sse9I AATT 7 cut(s) 486, 534, 670, 1110, 1155, 1303, 1708
SseBI AGGCCT 1 cut(s) 1188
SsiI CCGC 9 cut(s) 327, 400, 403, 406, 408, 420, 902, 1031, 1849
SspMI CTAG 2 cut(s) 15, 167
SstI GAGCTC 1 cut(s) 1251
StuI AGGCCT 1 cut(s) 1188
StyI CCWWGG 1 cut(s) 1557
TaaI ACNGT 2 cut(s) 784, 1820
TaiI ACGT 2 cut(s) 41, 896
TaqI TCGA 5 cut(s) 581, 648, 1205, 1251, 1393
TasI AATT 7 cut(s) 486, 534, 670, 1110, 1155, 1303, 1708
TauI GCSGC 4 cut(s) 402, 405, 408, 422
TfiI GAWTC 4 cut(s) 347, 694, 907, 1666
Tru1I TTAA 7 cut(s) 135, 936, 1062, 1166, 1212, 1263, 1707
Tru9I TTAA 7 cut(s) 135, 936, 1062, 1166, 1212, 1263, 1707
TscAI CASTG 6 cut(s) 298, 1224, 1329, 1618, 1703, 1825
TseFI GTSAC 4 cut(s) 58, 333, 1487, 1840
TseI GCWGC 1 cut(s) 5
Tsp45I GTSAC 4 cut(s) 58, 333, 1487, 1840
TspGWI ACGGA 1 cut(s) 1854
TspRI CASTG 6 cut(s) 298, 1224, 1329, 1618, 1703, 1825
Van91I CCANNNNNTGG 2 cut(s) 429, 1754
VspI ATTAAT 1 cut(s) 1263
XapI RAATTY 1 cut(s) 670
XceI RCATGY 2 cut(s) 1390, 1891
XcmI CCANNNNNNNNNTGG 1 cut(s) 1695
XmiI GTMKAC 2 cut(s) 41, 581
XmnI GAANNNNTTC 1 cut(s) 644
XspI CTAG 2 cut(s) 15, 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.