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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0025378.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00015130 Rroxscaffold_3G00265680 Rroxscaffold_5G00352540 |
| rosa_rugosa | Rorug03G0071900 Rorug03G0072000 |
| rosa_samantha | Rh1AG000200 Rh1AG207500 Rh1CG192300 Rh4AG243600 Rh4BG248500 Rh4BG248600 Rh5AG178200 Rh5AG456300 Rh6CG011200 Rh6CG320600 Rh6DG012500 Rh6DG305900 Rh7DG283100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 172, 278, 319 |
| AfaI | GTAC | 1 cut(s) | 86 |
| AgsI | TTSAA | 2 cut(s) | 33, 373 |
| AjnI | CCWGG | 1 cut(s) | 132 |
| AluBI | AGCT | 1 cut(s) | 92 |
| AluI | AGCT | 1 cut(s) | 92 |
| ApeKI | GCWGC | 2 cut(s) | 39, 92 |
| ApoI | RAATTY | 3 cut(s) | 172, 278, 319 |
| AsuC2I | CCSGG | 1 cut(s) | 208 |
| AsuHPI | GGTGA | 1 cut(s) | 149 |
| BbsI | GAAGAC | 2 cut(s) | 86, 126 |
| BbvI | GCAGC | 2 cut(s) | 51, 79 |
| BccI | CCATC | 1 cut(s) | 11 |
| BciT130I | CCWGG | 1 cut(s) | 134 |
| BcnI | CCSGG | 1 cut(s) | 208 |
| BfaI | CTAG | 1 cut(s) | 324 |
| BisI | GCNGC | 2 cut(s) | 40, 93 |
| BlsI | GCNGC | 2 cut(s) | 41, 94 |
| Bme1390I | CCNGG | 2 cut(s) | 134, 208 |
| BmrFI | CCNGG | 2 cut(s) | 134, 208 |
| BpiI | GAAGAC | 2 cut(s) | 86, 126 |
| BpuMI | CCSGG | 1 cut(s) | 208 |
| BsaJI | CCNNGG | 1 cut(s) | 133 |
| BseBI | CCWGG | 1 cut(s) | 134 |
| BseDI | CCNNGG | 1 cut(s) | 133 |
| BseXI | GCAGC | 2 cut(s) | 51, 79 |
| Bsh1285I | CGRYCG | 2 cut(s) | 276, 338 |
| BsiEI | CGRYCG | 2 cut(s) | 276, 338 |
| BsiSI | CCGG | 1 cut(s) | 207 |
| BslFI | GGGAC | 2 cut(s) | 40, 223 |
| BsmFI | GGGAC | 2 cut(s) | 40, 223 |
| Bsp143I | GATC | 1 cut(s) | 269 |
| BssECI | CCNNGG | 1 cut(s) | 133 |
| BssMI | GATC | 1 cut(s) | 269 |
| Bst2UI | CCWGG | 1 cut(s) | 134 |
| BstDEI | CTNAG | 1 cut(s) | 88 |
| BstKTI | GATC | 1 cut(s) | 272 |
| BstMBI | GATC | 1 cut(s) | 269 |
| BstMCI | CGRYCG | 2 cut(s) | 276, 338 |
| BstNI | CCWGG | 1 cut(s) | 134 |
| BstNSI | RCATGY | 1 cut(s) | 39 |
| BstSCI | CCNGG | 2 cut(s) | 132, 206 |
| BstV1I | GCAGC | 2 cut(s) | 51, 79 |
| BstV2I | GAAGAC | 2 cut(s) | 86, 126 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 56 |
| CseI | GACGC | 1 cut(s) | 95 |
| Csp6I | GTAC | 1 cut(s) | 85 |
| CviAII | CATG | 2 cut(s) | 14, 36 |
| CviJI | RGCY | 4 cut(s) | 92, 132, 260, 365 |
| CviKI_1 | RGCY | 4 cut(s) | 92, 132, 260, 365 |
| CviQI | GTAC | 1 cut(s) | 85 |
| DdeI | CTNAG | 1 cut(s) | 88 |
| DpnI | GATC | 1 cut(s) | 271 |
| DpnII | GATC | 1 cut(s) | 269 |
| EcoRI | GAATTC | 1 cut(s) | 319 |
| EcoRII | CCWGG | 1 cut(s) | 132 |
| FaeI | CATG | 2 cut(s) | 17, 39 |
| FaiI | YATR | 6 cut(s) | 15, 37, 162, 233, 245, 368 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 71, 103 |
| FaqI | GGGAC | 2 cut(s) | 40, 223 |
| FatI | CATG | 2 cut(s) | 13, 35 |
| Fnu4HI | GCNGC | 2 cut(s) | 40, 93 |
| Fsp4HI | GCNGC | 2 cut(s) | 40, 93 |
| FspBI | CTAG | 1 cut(s) | 324 |
| GluI | GCNGC | 2 cut(s) | 40, 93 |
| HapII | CCGG | 1 cut(s) | 207 |
| HgaI | GACGC | 1 cut(s) | 95 |
| Hin1II | CATG | 2 cut(s) | 17, 39 |
| HinfI | GANTC | 1 cut(s) | 340 |
| HpaII | CCGG | 1 cut(s) | 207 |
| HphI | GGTGA | 1 cut(s) | 149 |
| Hpy166II | GTNNAC | 1 cut(s) | 140 |
| Hpy188I | TCNGA | 1 cut(s) | 300 |
| Hpy8I | GTNNAC | 1 cut(s) | 140 |
| HpyAV | CCTTC | 2 cut(s) | 17, 355 |
| HpyCH4IV | ACGT | 1 cut(s) | 83 |
| HpyCH4V | TGCA | 2 cut(s) | 39, 179 |
| HpyF3I | CTNAG | 1 cut(s) | 88 |
| HpySE526I | ACGT | 1 cut(s) | 83 |
| Hsp92II | CATG | 2 cut(s) | 17, 39 |
| Kzo9I | GATC | 1 cut(s) | 269 |
| LpnPI | CCDG | 3 cut(s) | 119, 146, 220 |
| Lsp1109I | GCAGC | 2 cut(s) | 51, 79 |
| MaeI | CTAG | 1 cut(s) | 324 |
| MaeII | ACGT | 1 cut(s) | 83 |
| MaeIII | GTNAC | 1 cut(s) | 329 |
| MalI | GATC | 1 cut(s) | 271 |
| MboI | GATC | 1 cut(s) | 269 |
| MboII | GAAGA | 3 cut(s) | 91, 131, 147 |
| MfeI | CAATTG | 1 cut(s) | 101 |
| MluCI | AATT | 7 cut(s) | 101, 172, 190, 278, 319, 345, 373 |
| MseI | TTAA | 2 cut(s) | 9, 219 |
| MslI | CAYNNNNRTG | 1 cut(s) | 54 |
| MspI | CCGG | 1 cut(s) | 207 |
| MspR9I | CCNGG | 2 cut(s) | 134, 208 |
| MunI | CAATTG | 1 cut(s) | 101 |
| MvaI | CCWGG | 1 cut(s) | 134 |
| NciI | CCSGG | 1 cut(s) | 208 |
| NdeII | GATC | 1 cut(s) | 269 |
| NlaIII | CATG | 2 cut(s) | 17, 39 |
| NmuCI | GTSAC | 1 cut(s) | 329 |
| NspI | RCATGY | 1 cut(s) | 39 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 233 |
| PfeI | GAWTC | 1 cut(s) | 340 |
| PfoI | TCCNGGA | 1 cut(s) | 206 |
| PkrI | GCNGC | 2 cut(s) | 41, 94 |
| Psp6I | CCWGG | 1 cut(s) | 132 |
| PspGI | CCWGG | 1 cut(s) | 132 |
| RsaI | GTAC | 1 cut(s) | 86 |
| RsaNI | GTAC | 1 cut(s) | 85 |
| RseI | CAYNNNNRTG | 1 cut(s) | 54 |
| SaqAI | TTAA | 2 cut(s) | 9, 219 |
| SatI | GCNGC | 2 cut(s) | 40, 93 |
| Sau3AI | GATC | 1 cut(s) | 269 |
| ScrFI | CCNGG | 2 cut(s) | 134, 208 |
| SetI | ASST | 3 cut(s) | 86, 94, 115 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 54 |
| Sse9I | AATT | 7 cut(s) | 101, 172, 190, 278, 319, 345, 373 |
| SspMI | CTAG | 1 cut(s) | 324 |
| StyD4I | CCNGG | 2 cut(s) | 132, 206 |
| TaiI | ACGT | 1 cut(s) | 86 |
| TaqI | TCGA | 1 cut(s) | 276 |
| TaqII | GACCGA | 3 cut(s) | 262, 348, 352 |
| TasI | AATT | 7 cut(s) | 101, 172, 190, 278, 319, 345, 373 |
| TfiI | GAWTC | 1 cut(s) | 340 |
| Tru1I | TTAA | 2 cut(s) | 9, 219 |
| Tru9I | TTAA | 2 cut(s) | 9, 219 |
| TseFI | GTSAC | 1 cut(s) | 329 |
| TseI | GCWGC | 2 cut(s) | 39, 92 |
| Tsp45I | GTSAC | 1 cut(s) | 329 |
| TspDTI | ATGAA | 3 cut(s) | 141, 141, 327 |
| XapI | RAATTY | 3 cut(s) | 172, 278, 319 |
| XceI | RCATGY | 1 cut(s) | 39 |
| XspI | CTAG | 1 cut(s) | 324 |