Paired amphipathic helix protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0025378.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00015130 Rroxscaffold_3G00265680 Rroxscaffold_5G00352540 |
| rosa_rugosa | Rorug03G0071900 Rorug03G0072000 |
| rosa_samantha | Rh1AG000200 Rh1AG207500 Rh1CG192300 Rh4AG243600 Rh4BG248500 Rh4BG248600 Rh5AG178200 Rh5AG456300 Rh6CG011200 Rh6CG320600 Rh6DG012500 Rh6DG305900 Rh7DG283100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 295 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 198 |
| AgsI | TTSAA | 1 cut(s) | 160 |
| AjnI | CCWGG | 1 cut(s) | 255 |
| AluBI | AGCT | 3 cut(s) | 10, 16, 215 |
| AluI | AGCT | 3 cut(s) | 10, 16, 215 |
| ApeKI | GCWGC | 2 cut(s) | 166, 215 |
| ApoI | RAATTY | 1 cut(s) | 295 |
| AsuHPI | GGTGA | 1 cut(s) | 92 |
| BbsI | GAAGAC | 2 cut(s) | 213, 249 |
| BbvI | GCAGC | 2 cut(s) | 178, 202 |
| BccI | CCATC | 1 cut(s) | 137 |
| BciT130I | CCWGG | 1 cut(s) | 257 |
| BisI | GCNGC | 2 cut(s) | 167, 216 |
| BlsI | GCNGC | 2 cut(s) | 168, 217 |
| Bme1390I | CCNGG | 1 cut(s) | 257 |
| BmrFI | CCNGG | 1 cut(s) | 257 |
| BmsI | GCATC | 1 cut(s) | 238 |
| BpiI | GAAGAC | 2 cut(s) | 213, 249 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 252, 284 |
| BsaJI | CCNNGG | 1 cut(s) | 256 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 64, 94 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 198 |
| BseBI | CCWGG | 1 cut(s) | 257 |
| BseDI | CCNNGG | 1 cut(s) | 256 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 198 |
| BseRI | GAGGAG | 1 cut(s) | 112 |
| BseXI | GCAGC | 2 cut(s) | 178, 202 |
| BslFI | GGGAC | 2 cut(s) | 134, 167 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 198 |
| BsmFI | GGGAC | 2 cut(s) | 134, 167 |
| BspHI | TCATGA | 1 cut(s) | 283 |
| BssECI | CCNNGG | 1 cut(s) | 256 |
| Bst2UI | CCWGG | 1 cut(s) | 257 |
| BstDEI | CTNAG | 1 cut(s) | 211 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 73 |
| BstNI | CCWGG | 1 cut(s) | 257 |
| BstNSI | RCATGY | 1 cut(s) | 166 |
| BstSCI | CCNGG | 1 cut(s) | 255 |
| BstV1I | GCAGC | 2 cut(s) | 178, 202 |
| BstV2I | GAAGAC | 2 cut(s) | 213, 249 |
| CciI | TCATGA | 1 cut(s) | 283 |
| CviAII | CATG | 4 cut(s) | 77, 140, 163, 284 |
| CviJI | RGCY | 4 cut(s) | 10, 16, 215, 255 |
| CviKI_1 | RGCY | 4 cut(s) | 10, 16, 215, 255 |
| DdeI | CTNAG | 1 cut(s) | 211 |
| EcoRII | CCWGG | 1 cut(s) | 255 |
| FaeI | CATG | 4 cut(s) | 80, 143, 166, 287 |
| FaiI | YATR | 6 cut(s) | 53, 78, 141, 164, 198, 285 |
| FaqI | GGGAC | 2 cut(s) | 134, 167 |
| FatI | CATG | 4 cut(s) | 76, 139, 162, 283 |
| Fnu4HI | GCNGC | 2 cut(s) | 167, 216 |
| Fsp4HI | GCNGC | 2 cut(s) | 167, 216 |
| GluI | GCNGC | 2 cut(s) | 167, 216 |
| Hin1II | CATG | 4 cut(s) | 80, 143, 166, 287 |
| HphI | GGTGA | 1 cut(s) | 92 |
| Hpy188III | TCNNGA | 1 cut(s) | 284 |
| HpyAV | CCTTC | 1 cut(s) | 56 |
| HpyCH4V | TGCA | 4 cut(s) | 51, 166, 229, 302 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 73 |
| HpyF3I | CTNAG | 1 cut(s) | 211 |
| Hsp92II | CATG | 4 cut(s) | 80, 143, 166, 287 |
| LmnI | GCTCC | 1 cut(s) | 15 |
| LpnPI | CCDG | 4 cut(s) | 26, 112, 242, 269 |
| Lsp1109I | GCAGC | 2 cut(s) | 178, 202 |
| LweI | GCATC | 1 cut(s) | 238 |
| MboII | GAAGA | 3 cut(s) | 218, 254, 270 |
| MfeI | CAATTG | 1 cut(s) | 224 |
| MluCI | AATT | 2 cut(s) | 224, 295 |
| MnlI | CCTC | 4 cut(s) | 47, 66, 90, 97 |
| MseI | TTAA | 1 cut(s) | 135 |
| MslI | CAYNNNNRTG | 2 cut(s) | 201, 234 |
| MspR9I | CCNGG | 1 cut(s) | 257 |
| MunI | CAATTG | 1 cut(s) | 224 |
| MvaI | CCWGG | 1 cut(s) | 257 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 73 |
| NlaIII | CATG | 4 cut(s) | 80, 143, 166, 287 |
| NspI | RCATGY | 1 cut(s) | 166 |
| PagI | TCATGA | 1 cut(s) | 283 |
| PkrI | GCNGC | 2 cut(s) | 168, 217 |
| Psp6I | CCWGG | 1 cut(s) | 255 |
| PspGI | CCWGG | 1 cut(s) | 255 |
| RseI | CAYNNNNRTG | 2 cut(s) | 201, 234 |
| SaqAI | TTAA | 1 cut(s) | 135 |
| SatI | GCNGC | 2 cut(s) | 167, 216 |
| ScrFI | CCNGG | 1 cut(s) | 257 |
| SetI | ASST | 5 cut(s) | 12, 18, 217, 238, 311 |
| SfaNI | GCATC | 1 cut(s) | 238 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 201, 234 |
| Sse9I | AATT | 2 cut(s) | 224, 295 |
| StyD4I | CCNGG | 1 cut(s) | 255 |
| TasI | AATT | 2 cut(s) | 224, 295 |
| Tru1I | TTAA | 1 cut(s) | 135 |
| Tru9I | TTAA | 1 cut(s) | 135 |
| TseI | GCWGC | 2 cut(s) | 166, 215 |
| TspDTI | ATGAA | 2 cut(s) | 264, 264 |
| XapI | RAATTY | 1 cut(s) | 295 |
| XceI | RCATGY | 1 cut(s) | 166 |