Paired amphipathic helix protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0025378.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00015130 Rroxscaffold_3G00265680 Rroxscaffold_5G00352540 |
| rosa_rugosa | Rorug03G0071900 Rorug03G0072000 |
| rosa_samantha | Rh1AG000200 Rh1AG207500 Rh1CG192300 Rh4AG243600 Rh4BG248500 Rh4BG248600 Rh5AG178200 Rh5AG456300 Rh6CG011200 Rh6CG320600 Rh6DG012500 Rh6DG305900 Rh7DG283100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 167 |
| AcsI | RAATTY | 1 cut(s) | 133 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 36 |
| AjnI | CCWGG | 1 cut(s) | 93 |
| AluBI | AGCT | 1 cut(s) | 53 |
| AluI | AGCT | 1 cut(s) | 53 |
| AlwI | GGATC | 1 cut(s) | 167 |
| ApeKI | GCWGC | 2 cut(s) | 4, 53 |
| ApoI | RAATTY | 1 cut(s) | 133 |
| BbsI | GAAGAC | 2 cut(s) | 51, 87 |
| BbvI | GCAGC | 2 cut(s) | 16, 40 |
| BciT130I | CCWGG | 1 cut(s) | 95 |
| BisI | GCNGC | 2 cut(s) | 5, 54 |
| BlsI | GCNGC | 2 cut(s) | 6, 55 |
| Bme1390I | CCNGG | 1 cut(s) | 95 |
| BmrFI | CCNGG | 1 cut(s) | 95 |
| BmsI | GCATC | 1 cut(s) | 76 |
| BpiI | GAAGAC | 2 cut(s) | 51, 87 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 90, 122 |
| BsaJI | CCNNGG | 1 cut(s) | 94 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 36 |
| BseBI | CCWGG | 1 cut(s) | 95 |
| BseDI | CCNNGG | 1 cut(s) | 94 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 36 |
| BseXI | GCAGC | 2 cut(s) | 16, 40 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 36 |
| Bsp143I | GATC | 1 cut(s) | 172 |
| BspHI | TCATGA | 1 cut(s) | 121 |
| BspPI | GGATC | 1 cut(s) | 167 |
| BssECI | CCNNGG | 1 cut(s) | 94 |
| BssMI | GATC | 1 cut(s) | 172 |
| Bst2UI | CCWGG | 1 cut(s) | 95 |
| BstDEI | CTNAG | 1 cut(s) | 49 |
| BstKTI | GATC | 1 cut(s) | 175 |
| BstMBI | GATC | 1 cut(s) | 172 |
| BstNI | CCWGG | 1 cut(s) | 95 |
| BstSCI | CCNGG | 1 cut(s) | 93 |
| BstV1I | GCAGC | 2 cut(s) | 16, 40 |
| BstV2I | GAAGAC | 2 cut(s) | 51, 87 |
| CciI | TCATGA | 1 cut(s) | 121 |
| CviAII | CATG | 1 cut(s) | 122 |
| CviJI | RGCY | 2 cut(s) | 53, 93 |
| CviKI_1 | RGCY | 2 cut(s) | 53, 93 |
| DdeI | CTNAG | 1 cut(s) | 49 |
| DpnI | GATC | 1 cut(s) | 174 |
| DpnII | GATC | 1 cut(s) | 172 |
| EcoRII | CCWGG | 1 cut(s) | 93 |
| FaeI | CATG | 1 cut(s) | 125 |
| FaiI | YATR | 2 cut(s) | 36, 123 |
| FatI | CATG | 1 cut(s) | 121 |
| Fnu4HI | GCNGC | 2 cut(s) | 5, 54 |
| Fsp4HI | GCNGC | 2 cut(s) | 5, 54 |
| GluI | GCNGC | 2 cut(s) | 5, 54 |
| Hin1II | CATG | 1 cut(s) | 125 |
| Hpy188III | TCNNGA | 1 cut(s) | 122 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 67, 140 |
| HpyF3I | CTNAG | 1 cut(s) | 49 |
| Hsp92II | CATG | 1 cut(s) | 125 |
| Kzo9I | GATC | 1 cut(s) | 172 |
| LpnPI | CCDG | 2 cut(s) | 80, 107 |
| Lsp1109I | GCAGC | 2 cut(s) | 16, 40 |
| LweI | GCATC | 1 cut(s) | 76 |
| MalI | GATC | 1 cut(s) | 174 |
| MboI | GATC | 1 cut(s) | 172 |
| MboII | GAAGA | 3 cut(s) | 56, 92, 108 |
| MfeI | CAATTG | 1 cut(s) | 62 |
| MluCI | AATT | 2 cut(s) | 62, 133 |
| MslI | CAYNNNNRTG | 2 cut(s) | 39, 72 |
| MspR9I | CCNGG | 1 cut(s) | 95 |
| MunI | CAATTG | 1 cut(s) | 62 |
| MvaI | CCWGG | 1 cut(s) | 95 |
| NdeII | GATC | 1 cut(s) | 172 |
| NlaIII | CATG | 1 cut(s) | 125 |
| PagI | TCATGA | 1 cut(s) | 121 |
| PkrI | GCNGC | 2 cut(s) | 6, 55 |
| Psp6I | CCWGG | 1 cut(s) | 93 |
| PspGI | CCWGG | 1 cut(s) | 93 |
| RseI | CAYNNNNRTG | 2 cut(s) | 39, 72 |
| SatI | GCNGC | 2 cut(s) | 5, 54 |
| Sau3AI | GATC | 1 cut(s) | 172 |
| ScrFI | CCNGG | 1 cut(s) | 95 |
| SetI | ASST | 2 cut(s) | 55, 76 |
| SfaNI | GCATC | 1 cut(s) | 76 |
| SgeI | CNNG | 4 cut(s) | 83, 106, 107, 134 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 39, 72 |
| Sse9I | AATT | 2 cut(s) | 62, 133 |
| StyD4I | CCNGG | 1 cut(s) | 93 |
| TasI | AATT | 2 cut(s) | 62, 133 |
| TseI | GCWGC | 2 cut(s) | 4, 53 |
| TspDTI | ATGAA | 2 cut(s) | 102, 102 |
| XapI | RAATTY | 1 cut(s) | 133 |