Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0013825

Physical Location & Seq

Genomic Coordinates Reverse (-)

2947504 .. 2952411

Gene Structure 4908 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00280390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGGCTTCTTCTTCATCATCCACCACCACCAAACCAATCCCAGTCTTCATCACCACCGATTCCTTACACTCAATCCTCTCTCATCAAACCCTAATCGACCACTTCCACTCTTCCCTCCCCACCGTCTCCTCCTCCCTCTGCTCCCCAATCCGCCAAAGCTACGCCGATTCGCCCACCTCCTCCCTCCTCCTCATGCCCTCCTGGTCCTCCTCCCCCTCCCTCCCCTACCTCGGCGTCAAGCTCGTCACCTACTTCCCTCTCAACTCCGCCGTCAACTTGCCCGGAATCCACGGCAGCTACGTCCTCTTCAGCTCCACCACCGGCCAAACCCTGGCCACCATGGACGGCACTGCTCTCACTCTCTACCGCACCGCCTGCGTCTCCGGCTTGGCTTCCAGAATTCTCTCGAGAAACGACAGTGAGGTTTTGGTCATGATCGGAGCCGGTGCTCTGGCGCCGCATTTGATCAGGGCGCATCTTGCGGCGAGGCCTGGCTTGAAGAGAGTGATCATATGGAACAGGACGGAGGTGAAGGCGAGAGCATTGGCGGAGGAGATGAGGGGAAGCGTGGGAGGTGATGGTATTGAGTTTGAGAGCAATGGGAGCTTGGATGAGGCGGTGGCGATGGGGGACATTCATTCGATGAAGGAGTGTGATGATGAGGCCATAAGGAGGGGGAGGGTGTTTGTGGACAATGAGGCGGCGCTGGTGGAGGCTGGGGAGTTGGTTGGAGCTTTCGAGAGAGGTGTGATCGGGAAGGGGGATGTGTGTGGGATGCTGGTGGAGTTGATCGGAGGAGAGAAGGCTGGGAGGAGAAGTTCCGAGGAGATTACCGTGTTCAAGTCGGTTGGTTCTGCAGTTGTGGACATTCTTGCTGCACAGCTGGTGTATGAAACTTACATGAAGCAGCCTAGTCTAGTTGAGAACAATGCACTACGTTCAGCTAAATCAGAGCTATTCAACTTCATAGTTTACTTCTGCTTTGACTTGGCAGCAAAAAGGACAAGAATTAGAAAAAAGAATATCATTGAGTTGTCTCTCAGCACTATACTCAGAAGTGGCCTGATAAGACAGTATACGGGGCAATCAAAGGCAATGTCACTTTCTAACTTCGGTGAAATAGGCATATTATACTCAGAAGTGGCAGATGGGGCAATCAAAGGCAATCTCATCTCATATGGCTTTCGACGCTCGACGGAGCCTCTTACTATCGTGTTCACGCTTCCCGCGTCGGTTGGTATCGGAGCGGGTATCGCCCGCTTCTTAGCAAACGACGATCCAAGGGAGAAGTTCACTACCACCAACCTCAACGACGCTGGTCGTAGAGTATCTATCAAAGAAAGTTTCGTTGAAGAGGAACATGCCAAGGGATTTGCCCTAGGACAACCTCATCAATCCAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAACATGGAACGTTGGATATTCACAACGCCGGATTACGACGACTTCCGAACTACATGTATCATCAACGACAAGAAGAGGTTACTTGTCATGTGATTGACATGGACGACACTAATGTGCTTTTTGGAAAACCATGGCATAAAAGCGTCAAAGGTGGTTATTGCAAAGACAACACATATTTATTTAGGTGGGAGTCGCACAAAATTAAAATCAAGCCCGGAATGAAGAACATCAAGAATGACCCTCCCGAGGTATGTGAAAAGGAACATGAAGAAGTTACTTTGAAGATTGAAGAGAAACTCATTAAAGACAAGGAAGCTGATTCATTCATCACATCGATACCCATGTCATGCATGCCTAATTGTGTTCAAGATCAACCCAATGAGAAGTCCATGCCCATTCCTTTTCAAGTTGAGGAGTTCAAGTTTCAAGATGCTTATTCTAAACTTGTCTACGGTATTGGATTCATGGTGATACCTTTTAATTTCGAGAATATTGAAGTTGATGGCTTATCATGTTTTATTCCTACTAATGATCGAGCTGCATACAAGAGGAACTCGAGGTCGAGTTCTTATCAAGTGGAGGAGGCTGATGTAGGAAGAGATTTTAGCCAATTTCAACCAAAAATCTCGAAAAGAAAGAAGCGTCTTCACATTAAGAAGAATAATTTGAATATTGGAAATTGGTATTCAAATAGGCTTCTTAATGATGGAATTAATCATAAATTACTCTTTTGGATATATCGGGATTCTCGAGCAAAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002684 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0010112 GO:0016491 GO:0016638 GO:0016639 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044424 GO:0044444 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0055114 GO:0065007 GO:0080134 GO:1901672

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OCD_Mu_crystall

Protein Analysis

731

Amino Acids

81.39

Weight (kDa)

9.11

Isoelectric Point (pI)

49.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OCD_Mu_crystall	PF02423	59 - 212	7.9e-23	Ornithine cyclodeaminase/mu-crystallin family
Shikimate_DH	PF01488	130 - 189	2.5e-06	Shikimate / quinate 5-dehydrogenase
OCD_Mu_crystall	PF02423	211 - 300	7.7e-14	Ornithine cyclodeaminase/mu-crystallin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013825)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52810
fragaria_vesca	FvH4_7g30420
malus_domestica	MD07G1279900.v1.1
prunus_persica	Prupe.2G302000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0378551
rosa_laevigata	RLG00000026423
rosa_multiflora	Rmu_sc0002395.1_g000001 Rmu_sc0002395.1_g000005 Rmu_sc0008712.1_g000005 Rmu_sc0008712.1_g000006 Rmu_sc0008712.1_g000010
rosa_roxburghii	Rroxscaffold_4G00280390
rosa_rugosa	Rorug01G0409700
rosa_samantha	Rh1AG431000 Rh1BG389300 Rh1DG420500
rosa_wichuraiana	Rw1G037750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	454
AccB7I	CCANNNNNTGG	1 cut(s)	331
AccBSI	CCGCTC	1 cut(s)	1247
AccI	GTMKAC	2 cut(s)	1076, 1881
AccII	CGCG	1 cut(s)	1229
AclI	AACGTT	1 cut(s)	1442
AclWI	GGATC	1 cut(s)	1271
AcoI	YGGCCR	2 cut(s)	322, 333
AcsI	RAATTY	1 cut(s)	399
AcuI	CTGAAG	1 cut(s)	292
AcyI	GRCGYC	2 cut(s)	234, 455
AfiI	CCNNNNNNNGG	4 cut(s)	230, 331, 672, 1678
AflIII	ACRYGT	1 cut(s)	1485
AjnI	CCWGG	3 cut(s)	200, 330, 490
AleI	CACNNNNGTG	1 cut(s)	1544
AloI	GAACNNNNNNTCC	2 cut(s)	802, 834
Alw21I	GWGCWC	1 cut(s)	451
Alw26I	GTCTC	3 cut(s)	130, 385, 1041
AlwI	GGATC	1 cut(s)	1271
Ama87I	CYCGRG	4 cut(s)	406, 1676, 1987, 2181
AoxI	GGCC	5 cut(s)	322, 333, 488, 663, 1060
ApeKI	GCWGC	5 cut(s)	294, 875, 907, 992, 1970
ApoI	RAATTY	1 cut(s)	399
ArsI	GACNNNNNNTTYG	2 cut(s)	1082, 1114
AseI	ATTAAT	1 cut(s)	2145
AspA2I	CCTAGG	1 cut(s)	1378
AspLEI	GCGC	3 cut(s)	457, 475, 706
AspS9I	GGNCC	1 cut(s)	204
AsuC2I	CCSGG	2 cut(s)	282, 1647
AsuHPI	GGTGA	6 cut(s)	43, 238, 541, 587, 1127, 1912
AvaI	CYCGRG	4 cut(s)	406, 1676, 1987, 2181
AvaII	GGWCC	1 cut(s)	204
AvrII	CCTAGG	1 cut(s)	1378
BaeI	ACNNNNGTAYC	2 cut(s)	1760, 1793
BalI	TGGCCA	1 cut(s)	335
BanI	GGYRCC	1 cut(s)	454
BbsI	GAAGAC	2 cut(s)	37, 2069
Bbv12I	GWGCWC	1 cut(s)	451
BbvI	GCAGC	5 cut(s)	306, 862, 919, 1004, 1957
BccI	CCATC	5 cut(s)	572, 619, 1142, 1928, 2132
BceAI	ACGGC	3 cut(s)	254, 307, 361
BciT130I	CCWGG	3 cut(s)	202, 332, 492
BclI	TGATCA	2 cut(s)	465, 507
BcnI	CCSGG	2 cut(s)	282, 1647
BcoDI	GTCTC	3 cut(s)	130, 385, 1041
BfaI	CTAG	3 cut(s)	912, 917, 1379
BfmI	CTRYAG	1 cut(s)	855
BfoI	RGCGCY	2 cut(s)	458, 707
BisI	GCNGC	8 cut(s)	295, 458, 483, 702, 876, 908, 993, 1971
BlnI	CCTAGG	1 cut(s)	1378
BlsI	GCNGC	8 cut(s)	296, 459, 484, 703, 877, 909, 994, 1972
Bme1390I	CCNGG	5 cut(s)	202, 282, 332, 492, 1647
Bme18I	GGWCC	1 cut(s)	204
BmeT110I	CYCGRG	4 cut(s)	406, 1676, 1987, 2181
BmgT120I	GGNCC	1 cut(s)	204
BmiI	GGNNCC	3 cut(s)	442, 456, 1200
BmrFI	CCNGG	5 cut(s)	202, 282, 332, 492, 1647
BmrI	ACTGGG	1 cut(s)	35
BmsI	GCATC	3 cut(s)	484, 765, 1852
BmuI	ACTGGG	1 cut(s)	35
BoxI	GACNNNNGTC	1 cut(s)	1317
BpiI	GAAGAC	2 cut(s)	37, 2069
BpuMI	CCSGG	2 cut(s)	282, 1647
Bsa29I	ATCGAT	1 cut(s)	1766
BsaHI	GRCGYC	2 cut(s)	234, 455
BsaXI	ACNNNNNCTCC	4 cut(s)	802, 832, 1838, 1868
Bsc4I	CCNNNNNNNGG	4 cut(s)	230, 331, 672, 1678
Bse118I	RCCGGY	2 cut(s)	320, 443
Bse1I	ACTGG	1 cut(s)	41
Bse3DI	GCAATG	2 cut(s)	604, 1101
BseBI	CCWGG	3 cut(s)	202, 332, 492
BseCI	ATCGAT	1 cut(s)	1766
BseGI	GGATG	4 cut(s)	17, 616, 769, 780
BseLI	CCNNNNNNNGG	4 cut(s)	230, 331, 672, 1678
BseMI	GCAATG	2 cut(s)	604, 1101
BseMII	CTCAG	3 cut(s)	1054, 1066, 1149
BseNI	ACTGG	1 cut(s)	41
BseXI	GCAGC	5 cut(s)	306, 862, 919, 1004, 1957
BseYI	CCCAGC	2 cut(s)	716, 806
BsgI	GTGCAG	1 cut(s)	861
Bsh1236I	CGCG	1 cut(s)	1229
BshFI	GGCC	5 cut(s)	324, 335, 490, 665, 1062
BshNI	GGYRCC	1 cut(s)	454
BshVI	ATCGAT	1 cut(s)	1766
BsiHKAI	GWGCWC	1 cut(s)	451
BsiHKCI	CYCGRG	4 cut(s)	406, 1676, 1987, 2181
BsiSI	CCGG	6 cut(s)	282, 321, 384, 444, 1461, 1647
BslFI	GGGAC	1 cut(s)	644
BslI	CCNNNNNNNGG	4 cut(s)	230, 331, 672, 1678
BsmAI	GTCTC	3 cut(s)	130, 385, 1041
BsmBI	CGTCTC	2 cut(s)	130, 385
BsmFI	GGGAC	1 cut(s)	644
BsnI	GGCC	5 cut(s)	324, 335, 490, 665, 1062
BsoBI	CYCGRG	4 cut(s)	406, 1676, 1987, 2181
Bsp1286I	GDGCHC	1 cut(s)	451
Bsp143I	GATC	8 cut(s)	435, 465, 507, 750, 789, 1276, 1801, 1963
Bsp19I	CCATGG	2 cut(s)	339, 1562
BspANI	GGCC	5 cut(s)	324, 335, 490, 665, 1062
BspCNI	CTCAG	3 cut(s)	1053, 1065, 1148
BspDI	ATCGAT	1 cut(s)	1766
BspFNI	CGCG	1 cut(s)	1229
BspHI	TCATGA	1 cut(s)	432
BspLI	GGNNCC	3 cut(s)	442, 456, 1200
BspMAI	CTGCAG	1 cut(s)	859
BspPI	GGATC	1 cut(s)	1271
BspT107I	GGYRCC	1 cut(s)	454
BsrBI	CCGCTC	1 cut(s)	1247
BsrDI	GCAATG	2 cut(s)	604, 1101
BsrFI	RCCGGY	2 cut(s)	320, 443
BsrI	ACTGG	1 cut(s)	41
BssAI	RCCGGY	2 cut(s)	320, 443
BssMI	GATC	8 cut(s)	435, 465, 507, 750, 789, 1276, 1801, 1963
BssNAI	GTATAC	1 cut(s)	1077
BssNI	GRCGYC	2 cut(s)	234, 455
BssT1I	CCWWGG	5 cut(s)	339, 1280, 1365, 1378, 1562
Bst1107I	GTATAC	1 cut(s)	1077
Bst2UI	CCWGG	3 cut(s)	202, 332, 492
Bst4CI	ACNGT	5 cut(s)	124, 419, 835, 1074, 1886
Bst6I	CTCTTC	7 cut(s)	115, 311, 494, 1347, 1500, 1716, 2023
BstACI	GRCGYC	2 cut(s)	234, 455
BstAPI	GCANNNNNTGC	1 cut(s)	375
BstC8I	GCNNGC	3 cut(s)	376, 1258, 1784
BstDEI	CTNAG	4 cut(s)	1040, 1052, 1135, 1264
BstDSI	CCRYGG	3 cut(s)	289, 339, 1562
BstF5I	GGATG	4 cut(s)	17, 616, 769, 780
BstFNI	CGCG	1 cut(s)	1229
BstH2I	RGCGCY	2 cut(s)	458, 707
BstHHI	GCGC	3 cut(s)	457, 475, 706
BstKTI	GATC	8 cut(s)	438, 468, 510, 753, 792, 1279, 1804, 1966
BstMAI	GTCTC	3 cut(s)	130, 385, 1041
BstMBI	GATC	8 cut(s)	435, 465, 507, 750, 789, 1276, 1801, 1963
BstMWI	GCNNNNNNNGC	7 cut(s)	375, 384, 479, 603, 1151, 1188, 1253
BstNI	CCWGG	3 cut(s)	202, 332, 492
BstNSI	RCATGY	3 cut(s)	1364, 1489, 1786
BstPAI	GACNNNNGTC	1 cut(s)	1317
BstSCI	CCNGG	5 cut(s)	200, 280, 330, 490, 1645
BstSFI	CTRYAG	1 cut(s)	855
BstUI	CGCG	1 cut(s)	1229
BstV1I	GCAGC	5 cut(s)	306, 862, 919, 1004, 1957
BstV2I	GAAGAC	2 cut(s)	37, 2069
BstZ17I	GTATAC	1 cut(s)	1077
Bsu15I	ATCGAT	1 cut(s)	1766
BsuRI	GGCC	5 cut(s)	324, 335, 490, 665, 1062
BsuTUI	ATCGAT	1 cut(s)	1766
BtgI	CCRYGG	3 cut(s)	289, 339, 1562
BtgZI	GCGATG	1 cut(s)	638
BtsCI	GGATG	4 cut(s)	17, 616, 769, 780
BtsI	GCAGTG	1 cut(s)	348
BtsIMutI	CAGTG	2 cut(s)	348, 424
Cac8I	GCNNGC	3 cut(s)	376, 1258, 1784
CciI	TCATGA	1 cut(s)	432
CfoI	GCGC	3 cut(s)	457, 475, 706
Cfr10I	RCCGGY	2 cut(s)	320, 443
Cfr13I	GGNCC	1 cut(s)	204
ClaI	ATCGAT	1 cut(s)	1766
CseI	GACGC	7 cut(s)	223, 367, 1197, 1218, 1322, 1564, 2063
DdeI	CTNAG	4 cut(s)	1040, 1052, 1135, 1264
DinI	GGCGCC	1 cut(s)	456
DpnI	GATC	8 cut(s)	437, 467, 509, 752, 791, 1278, 1803, 1965
DpnII	GATC	8 cut(s)	435, 465, 507, 750, 789, 1276, 1801, 1963
EaeI	YGGCCR	2 cut(s)	322, 333
Eam1104I	CTCTTC	7 cut(s)	115, 311, 494, 1347, 1500, 1716, 2023
EarI	CTCTTC	7 cut(s)	115, 311, 494, 1347, 1500, 1716, 2023
EciI	GGCGGA	3 cut(s)	140, 256, 563
Eco130I	CCWWGG	5 cut(s)	339, 1280, 1365, 1378, 1562
Eco147I	AGGCCT	1 cut(s)	490
Eco47I	GGWCC	1 cut(s)	204
Eco57I	CTGAAG	1 cut(s)	292
Eco88I	CYCGRG	4 cut(s)	406, 1676, 1987, 2181
EcoRI	GAATTC	1 cut(s)	399
EcoRII	CCWGG	3 cut(s)	200, 330, 490
EcoT14I	CCWWGG	5 cut(s)	339, 1280, 1365, 1378, 1562
EcoT22I	ATGCAT	1 cut(s)	1784
EgeI	GGCGCC	1 cut(s)	456
EheI	GGCGCC	1 cut(s)	456
ErhI	CCWWGG	5 cut(s)	339, 1280, 1365, 1378, 1562
Esp3I	CGTCTC	2 cut(s)	130, 385
FaqI	GGGAC	1 cut(s)	644
FauI	CCCGC	3 cut(s)	1234, 1240, 1265
FauNDI	CATATG	2 cut(s)	512, 1177
FbaI	TGATCA	2 cut(s)	465, 507
FblI	GTMKAC	2 cut(s)	1076, 1881
Fnu4HI	GCNGC	8 cut(s)	295, 458, 483, 702, 876, 908, 993, 1971
FokI	GGATG	4 cut(s)	4, 623, 776, 787
Fsp4HI	GCNGC	8 cut(s)	295, 458, 483, 702, 876, 908, 993, 1971
FspBI	CTAG	3 cut(s)	912, 917, 1379
GlaI	GCGC	3 cut(s)	456, 474, 705
GluI	GCNGC	8 cut(s)	295, 458, 483, 702, 876, 908, 993, 1971
GsaI	CCCAGC	2 cut(s)	720, 810
HaeII	RGCGCY	2 cut(s)	458, 707
HaeIII	GGCC	5 cut(s)	324, 335, 490, 665, 1062
HapII	CCGG	6 cut(s)	282, 321, 384, 444, 1461, 1647
HgaI	GACGC	7 cut(s)	223, 367, 1197, 1218, 1322, 1564, 2063
HhaI	GCGC	3 cut(s)	457, 475, 706
Hin1I	GRCGYC	2 cut(s)	234, 455
Hin6I	GCGC	3 cut(s)	455, 473, 704
HinP1I	GCGC	3 cut(s)	455, 473, 704
HincII	GTYRAC	1 cut(s)	274
HindII	GTYRAC	1 cut(s)	274
HinfI	GANTC	7 cut(s)	59, 167, 285, 1622, 1751, 1893, 2177
HpaII	CCGG	6 cut(s)	282, 321, 384, 444, 1461, 1647
HphI	GGTGA	6 cut(s)	43, 238, 541, 587, 1127, 1912
Hpy166II	GTNNAC	8 cut(s)	274, 691, 865, 973, 1077, 1218, 1293, 1882
Hpy188I	TCNGA	8 cut(s)	440, 794, 823, 952, 1055, 1138, 1244, 1479
Hpy8I	GTNNAC	8 cut(s)	274, 691, 865, 973, 1077, 1218, 1293, 1882
Hpy99I	CGWCG	6 cut(s)	1191, 1198, 1234, 1277, 1316, 1473
HpyAV	CCTTC	4 cut(s)	526, 640, 751, 796
HpyCH4III	ACNGT	5 cut(s)	124, 419, 835, 1074, 1886
HpyCH4IV	ACGT	3 cut(s)	300, 937, 1442
HpyCH4V	TGCA	6 cut(s)	857, 878, 932, 1593, 1782, 1973
HpyF10VI	GCNNNNNNNGC	7 cut(s)	375, 384, 479, 603, 1151, 1188, 1253
HpyF3I	CTNAG	4 cut(s)	1040, 1052, 1135, 1264
HpySE526I	ACGT	3 cut(s)	300, 937, 1442
Hsp92I	GRCGYC	2 cut(s)	234, 455
HspAI	GCGC	3 cut(s)	455, 473, 704
KasI	GGCGCC	1 cut(s)	454
Ksp22I	TGATCA	2 cut(s)	465, 507
Kzo9I	GATC	8 cut(s)	435, 465, 507, 750, 789, 1276, 1801, 1963
LmnI	GCTCC	7 cut(s)	146, 317, 440, 603, 731, 1198, 1244
Lsp1109I	GCAGC	5 cut(s)	306, 862, 919, 1004, 1957
LweI	GCATC	3 cut(s)	484, 765, 1852
MaeI	CTAG	3 cut(s)	912, 917, 1379
MaeII	ACGT	3 cut(s)	300, 937, 1442
MaeIII	GTNAC	4 cut(s)	244, 1098, 1510, 1705
MalI	GATC	8 cut(s)	437, 467, 509, 752, 791, 1278, 1803, 1965
MbiI	CCGCTC	1 cut(s)	1247
MboI	GATC	8 cut(s)	435, 465, 507, 750, 789, 1276, 1801, 1963
MhlI	GDGCHC	1 cut(s)	451
MlsI	TGGCCA	1 cut(s)	335
MluNI	TGGCCA	1 cut(s)	335
Mly113I	GGCGCC	1 cut(s)	455
MlyI	GAGTC	1 cut(s)	1631
MmeI	TCCRAC	2 cut(s)	709, 1425
Mox20I	TGGCCA	1 cut(s)	335
Mph1103I	ATGCAT	1 cut(s)	1784
MscI	TGGCCA	1 cut(s)	335
MseI	TTAA	6 cut(s)	1635, 1734, 1911, 2085, 2133, 2145
MslI	CAYNNNNRTG	1 cut(s)	1544
Msp20I	TGGCCA	1 cut(s)	335
MspA1I	CMGCKG	1 cut(s)	883
MspI	CCGG	6 cut(s)	282, 321, 384, 444, 1461, 1647
MspR9I	CCNGG	5 cut(s)	202, 282, 332, 492, 1647
MvaI	CCWGG	3 cut(s)	202, 332, 492
MvnI	CGCG	1 cut(s)	1229
MwoI	GCNNNNNNNGC	7 cut(s)	375, 384, 479, 603, 1151, 1188, 1253
NarI	GGCGCC	1 cut(s)	455
NciI	CCSGG	2 cut(s)	282, 1647
NcoI	CCATGG	2 cut(s)	339, 1562
NdeI	CATATG	2 cut(s)	512, 1177
NdeII	GATC	8 cut(s)	435, 465, 507, 750, 789, 1276, 1801, 1963
NlaIV	GGNNCC	3 cut(s)	442, 456, 1200
NmeAIII	GCCGAG	1 cut(s)	210
NmuCI	GTSAC	2 cut(s)	244, 1098
NsiI	ATGCAT	1 cut(s)	1784
NspI	RCATGY	3 cut(s)	1364, 1489, 1786
OliI	CACNNNNGTG	1 cut(s)	1544
PaeI	GCATGC	1 cut(s)	1786
PaeR7I	CTCGAG	3 cut(s)	406, 1987, 2181
PagI	TCATGA	1 cut(s)	432
PceI	AGGCCT	1 cut(s)	490
PciI	ACATGT	1 cut(s)	1485
PcsI	WCGNNNNNNNCGW	3 cut(s)	297, 1226, 2179
PfeI	GAWTC	6 cut(s)	59, 167, 285, 1751, 1893, 2177
PflMI	CCANNNNNTGG	1 cut(s)	331
PkrI	GCNGC	8 cut(s)	296, 459, 484, 703, 877, 909, 994, 1972
PleI	GAGTC	1 cut(s)	1630
PluTI	GGCGCC	1 cut(s)	458
PpsI	GAGTC	1 cut(s)	1630
PscI	ACATGT	1 cut(s)	1485
PshAI	GACNNNNGTC	1 cut(s)	1317
PshBI	ATTAAT	1 cut(s)	2145
Psp1406I	AACGTT	1 cut(s)	1442
Psp6I	CCWGG	3 cut(s)	200, 330, 490
PspFI	CCCAGC	2 cut(s)	716, 806
PspGI	CCWGG	3 cut(s)	200, 330, 490
PspN4I	GGNNCC	3 cut(s)	442, 456, 1200
PspPI	GGNCC	1 cut(s)	204
PspXI	VCTCGAGB	1 cut(s)	1987
PstI	CTGCAG	1 cut(s)	859
PvuII	CAGCTG	1 cut(s)	883
RseI	CAYNNNNRTG	1 cut(s)	1544
SaqAI	TTAA	6 cut(s)	1635, 1734, 1911, 2085, 2133, 2145
SatI	GCNGC	8 cut(s)	295, 458, 483, 702, 876, 908, 993, 1971
Sau3AI	GATC	8 cut(s)	435, 465, 507, 750, 789, 1276, 1801, 1963
Sau96I	GGNCC	1 cut(s)	204
SchI	GAGTC	1 cut(s)	1631
ScrFI	CCNGG	5 cut(s)	202, 282, 332, 492, 1647
SduI	GDGCHC	1 cut(s)	451
SfaNI	GCATC	3 cut(s)	484, 765, 1852
SfcI	CTRYAG	1 cut(s)	855
SfoI	GGCGCC	1 cut(s)	456
Sfr274I	CTCGAG	3 cut(s)	406, 1987, 2181
SinI	GGWCC	1 cut(s)	204
SlaI	CTCGAG	3 cut(s)	406, 1987, 2181
SmiMI	CAYNNNNRTG	1 cut(s)	1544
SmlI	CTYRAG	3 cut(s)	406, 1987, 2181
SmoI	CTYRAG	3 cut(s)	406, 1987, 2181
SphI	GCATGC	1 cut(s)	1786
SseBI	AGGCCT	1 cut(s)	490
SspDI	GGCGCC	1 cut(s)	454
SspI	AATATT	2 cut(s)	1924, 2104
SspMI	CTAG	3 cut(s)	912, 917, 1379
StuI	AGGCCT	1 cut(s)	490
StyD4I	CCNGG	5 cut(s)	200, 280, 330, 490, 1645
StyI	CCWWGG	5 cut(s)	339, 1280, 1365, 1378, 1562
TaaI	ACNGT	5 cut(s)	124, 419, 835, 1074, 1886
TaiI	ACGT	3 cut(s)	303, 940, 1445
TauI	GCSGC	3 cut(s)	460, 485, 704
TfiI	GAWTC	6 cut(s)	59, 167, 285, 1751, 1893, 2177
Tru1I	TTAA	6 cut(s)	1635, 1734, 1911, 2085, 2133, 2145
Tru9I	TTAA	6 cut(s)	1635, 1734, 1911, 2085, 2133, 2145
TscAI	CASTG	2 cut(s)	355, 424
TseFI	GTSAC	2 cut(s)	244, 1098
TseI	GCWGC	5 cut(s)	294, 875, 907, 992, 1970
Tsp45I	GTSAC	2 cut(s)	244, 1098
TspGWI	ACGGA	2 cut(s)	539, 1211
TspRI	CASTG	2 cut(s)	355, 424
Van91I	CCANNNNNTGG	1 cut(s)	331
VpaK11BI	GGWCC	1 cut(s)	204
VspI	ATTAAT	1 cut(s)	2145
XapI	RAATTY	1 cut(s)	399
XceI	RCATGY	3 cut(s)	1364, 1489, 1786
XhoI	CTCGAG	3 cut(s)	406, 1987, 2181
XmaJI	CCTAGG	1 cut(s)	1378
XmiI	GTMKAC	2 cut(s)	1076, 1881
XspI	CTAG	3 cut(s)	912, 917, 1379
Zsp2I	ATGCAT	1 cut(s)	1784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.