Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0001256

Physical Location & Seq

Genomic Coordinates Forward (+)

51536403 .. 51543820

Gene Structure 7418 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0409700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGGCCTTGGTCTCGGCTGTGAGAGGCGGCCGGCTCCCGTCATCATTACATCATCATCATCTGGGTTCGTCTTCGTCTTCGTCTTCATCACTAGGTAGTTGGGGTTCGTTAAGACCATGGAAGCAGATGAATTCTAGCTCAAAGGGCTTCACTCTCTTGGCTCGTTACTCACAAACACAGGACCTTTTCTCCTCTCGCCTTCAAGATAGTATGGAAAACTTGCCTAAACTGGTGGAGGATATTGTCCGGACATCATTAAGTACAGGCCCACGTGGCGCCCTAAGGATGGCTCAAGGTATTCAAGCATTTATTGGTGTTGGTGGGGAGTGGCTTACTGAGGCATCAAAGTCAGCAAATTCATCTACTGGCTTACCAACCCAATTGCAGCTTGGAGTGCTCTCCCCCCTTTACTTGAGGAGATTGTTTGAGCGCATGGGAGCAACTTATATTAAATTGGGCCAGTTCATTGCATCCGCACCAACATTGTTCCCAGCAGACTATGTCGAGGAATTTCAGAACTGCTTTGACAGAGCTCCCGCAATACCTTTTGTGGAGATTCAACAAATATTGCGCCAGGAATTGGGGAGACCAATTGAAAGTGTATTTGAGTATGTTGACCCAACTCCAATTGCTTCGGCCTCAATAGCACAAGTTCACGGTGCAAGGCTAAGAGGGTCCCAAGAAGATGTGGTTATAAAGGTCTTGAAACCCGGAATAGAAGATATGTTGGTTGCAGATCTGAATTTTATTTACATAGTTGCTCGCATTTTGGAGTTCTTGAGTCCTGACATAAGCCGTGCTTCACTGGTTGGTATCGTGAAGGACATACGGGAATCTATGCTTGAAGAGGTTGATTTCTACAAGGAGGCTGCAAATGTTGAGTCCTTCAGGAGATATTTAGAAGCCATGGGACTCACAAGGCAGGCTACAGCTCCAAGAGTGTATCACCAATGCAGCACAAAACGAATTTTAACAATGGAGAGGCTATATGGGGTTCCTCTTACTGACTTAGACTCTATAAGTTCACTTGTTTCTAGTCCGGAGGCCAGTCTCATAACTGCCCTTAATGTGTGGTTTGGCAGTTTACTTGCCTGTGAAAGCTTCCATGCAGATGTGCACGCTGGAAATCTGTGGTTGTTGCGTGATGGCCGTATTGGGTTTCTTGACTTTGGAATCGTAGGTCGTATAGACCCACAAACATGGGCTGCCATGGAAATCTTTTTGGCATCAATTGCAACTGAAGAATATGAATCAATGGCATCTGCGTTGATTCAAATGGGTGCTACAGACACAAATGTTGATGCTAAGGCCTTTGCAAGAGACTTGGAAAAAATGTTCTCATCAATGAAGGAGTTGGATACGGAAATAGTCATAGCAACAGCCAGGGAGCCGGCTACCAATGCAACTGCTGTTTCTGCTAATGTAGTCGTTGATGAGAGACAAATGAATGCACTTTTTCTTGATGTGGTTCGGGTTAGTGAATCGTATGGATTGAAGTTTCCCCGAGAGTTTGCACTTCTCTTGAAGCAGCTCTTGTATTTTGATCGGTACACCCGTTTGTTGGCCCCAAACTTGAATATGCTCCAGGACCAAAGGATTTCAATTGCTTCAAATCGAAGAAGCAACTACAGGGACAATTTCAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002684 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0010112 GO:0016491 GO:0016638 GO:0016639 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044424 GO:0044444 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0055114 GO:0065007 GO:0080134 GO:1901672

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OCD_Mu_crystall

Protein Analysis

548

Amino Acids

60.87

Weight (kDa)

5.76

Isoelectric Point (pI)

41.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC1	PF03109	175 - 421	2.3e-59	ABC1 atypical kinase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21510
fragaria_vesca	FvH4_3g01870 FvH4_3g01870 FvH4_4g16820 FvH4_6g04970 FvH4_6g18230
malus_domestica	MD04G1212100.v1.1 MD12G1226800.v1.1 MD13G1176300.v1.1 MD14G1019100.v1.1 MD16G1178100.v1.1
prunus_persica	Prupe.1G145400_v2.0.a1 Prupe.6G332500_v2.0.a1
pyrus_communis	pycom04g18820 pycom12g21130 pycom13g15210 pycom16g14960
rosa_chinensis	RchiOBHm_Chr3g0453481 RchiOBHm_Chr3g0472651 RchiOBHm_Chr4g0420371
rosa_laevigata	RLG00000003639 RLG00000007769 RLG00000020144 RLG00000020856 RLG00000024066 RLG00000025510 RLG00000036750
rosa_multiflora	Rmu_sc0000510.1_g000011 Rmu_sc0003510.1_g000016 Rmu_sc0030670.1_g000001
rosa_roxburghii	Rroxscaffold_5G00363010 Rroxscaffold_6G00408750 Rroxscaffold_6G00430450
rosa_rugosa	Rorug01G0409700 Rorug02G0649400 Rorug03G0126900 Rorug04G0163500
rosa_samantha	Rh1CG265000 Rh3AG052200 Rh3AG179600 Rh3BG205500 Rh3CG053000 Rh3CG202600 Rh3DG053800 Rh3DG260200 Rh4BG227800 Rh4DG223300 Rh5AG521500 Rh6CG246900 Rh7DG248500
rosa_wichuraiana	Rw1G024970 Rw2G050090 Rw3G004030 Rw3G016310 Rw4G019410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	695
AccB1I	GGYRCC	1 cut(s)	275
AccB7I	CCANNNNNTGG	1 cut(s)	580
AccIII	TCCGGA	2 cut(s)	246, 1039
AciI	CCGC	3 cut(s)	27, 474, 537
AcoI	YGGCCR	2 cut(s)	28, 1147
AcsI	RAATTY	5 cut(s)	130, 355, 509, 742, 966
AcuI	CTGAAG	2 cut(s)	871, 1260
AcvI	CACGTG	1 cut(s)	272
AcyI	GRCGYC	1 cut(s)	276
AfaI	GTAC	2 cut(s)	262, 1550
AfiI	CCNNNNNNNGG	3 cut(s)	286, 580, 1561
AjnI	CCWGG	3 cut(s)	573, 1382, 1584
AloI	GAACNNNNNNTCC	2 cut(s)	1319, 1351
AluBI	AGCT	7 cut(s)	138, 388, 533, 932, 1101, 1531, 1644
AluI	AGCT	7 cut(s)	138, 388, 533, 932, 1101, 1531, 1644
Alw21I	GWGCWC	3 cut(s)	399, 535, 1119
Alw26I	GTCTC	5 cut(s)	16, 580, 1055, 1314, 1432
Alw44I	GTGCAC	1 cut(s)	1115
Ama87I	CYCGRG	1 cut(s)	1503
Aor13HI	TCCGGA	2 cut(s)	246, 1039
AoxI	GGCC	9 cut(s)	3, 28, 265, 457, 636, 1044, 1147, 1308, 1563
ApaLI	GTGCAC	1 cut(s)	1115
ApeKI	GCWGC	5 cut(s)	385, 869, 954, 1205, 1528
ApoI	RAATTY	5 cut(s)	130, 355, 509, 742, 966
ArsI	GACNNNNNNTTYG	2 cut(s)	866, 898
AspLEI	GCGC	3 cut(s)	278, 432, 573
AspS9I	GGNCC	6 cut(s)	181, 266, 457, 675, 1564, 1588
AsuC2I	CCSGG	1 cut(s)	711
AsuHPI	GGTGA	1 cut(s)	938
AvaI	CYCGRG	1 cut(s)	1503
AvaII	GGWCC	3 cut(s)	181, 675, 1588
AxyI	CCTNAGG	1 cut(s)	281
BaeGI	GKGCMC	1 cut(s)	1119
BaeI	ACNNNNGTAYC	2 cut(s)	1540, 1573
BanI	GGYRCC	1 cut(s)	275
BanII	GRGCYC	1 cut(s)	535
BbrPI	CACGTG	1 cut(s)	272
BbsI	GAAGAC	3 cut(s)	63, 69, 75
Bbv12I	GWGCWC	3 cut(s)	399, 535, 1119
BbvI	GCAGC	5 cut(s)	397, 856, 966, 1192, 1540
BccI	CCATC	2 cut(s)	280, 1139
BceAI	ACGGC	2 cut(s)	780, 1134
BciT130I	CCWGG	3 cut(s)	575, 1384, 1586
BciVI	GTATCC	1 cut(s)	1351
BcnI	CCSGG	1 cut(s)	711
BcoDI	GTCTC	5 cut(s)	16, 580, 1055, 1314, 1432
BfaI	CTAG	3 cut(s)	92, 135, 1035
BfmI	CTRYAG	3 cut(s)	927, 1284, 1627
BfoI	RGCGCY	1 cut(s)	279
BfuI	GTATCC	1 cut(s)	1351
BglI	GCCNNNNNGGC	1 cut(s)	273
BglII	AGATCT	1 cut(s)	736
BisI	GCNGC	6 cut(s)	28, 386, 870, 955, 1206, 1529
BlsI	GCNGC	6 cut(s)	29, 387, 871, 956, 1207, 1530
Bme1390I	CCNGG	4 cut(s)	575, 711, 1384, 1586
Bme18I	GGWCC	3 cut(s)	181, 675, 1588
BmeT110I	CYCGRG	1 cut(s)	1503
BmgT120I	GGNCC	6 cut(s)	181, 266, 457, 675, 1564, 1588
BmiI	GGNNCC	7 cut(s)	35, 277, 676, 677, 996, 1389, 1566
BmrFI	CCNGG	4 cut(s)	575, 711, 1384, 1586
BmsI	GCATC	5 cut(s)	350, 479, 1235, 1268, 1291
BpiI	GAAGAC	3 cut(s)	63, 69, 75
BpmI	CTGGAG	1 cut(s)	1568
Bpu10I	CCTNAGC	1 cut(s)	1305
BpuEI	CTTGAG	3 cut(s)	276, 433, 799
BpuMI	CCSGG	1 cut(s)	711
BsaAI	YACGTR	1 cut(s)	272
BsaHI	GRCGYC	1 cut(s)	276
BsaI	GGTCTC	2 cut(s)	16, 580
BsaJI	CCNNGG	5 cut(s)	6, 116, 906, 1209, 1383
BsaWI	WCCGGW	2 cut(s)	246, 1039
BsaXI	ACNNNNNCTCC	2 cut(s)	173, 203
Bsc4I	CCNNNNNNNGG	3 cut(s)	286, 580, 1561
Bse118I	RCCGGY	2 cut(s)	30, 1390
Bse1I	ACTGG	5 cut(s)	234, 370, 460, 810, 1047
Bse21I	CCTNAGG	1 cut(s)	281
Bse3DI	GCAATG	1 cut(s)	465
BseAI	TCCGGA	2 cut(s)	246, 1039
BseBI	CCWGG	3 cut(s)	575, 1384, 1586
BseDI	CCNNGG	5 cut(s)	6, 116, 906, 1209, 1383
BseGI	GGATG	2 cut(s)	291, 470
BseLI	CCNNNNNNNGG	3 cut(s)	286, 580, 1561
BseMI	GCAATG	1 cut(s)	465
BseMII	CTCAG	1 cut(s)	327
BseNI	ACTGG	5 cut(s)	234, 370, 460, 810, 1047
BseRI	GAGGAG	2 cut(s)	181, 430
BseSI	GKGCMC	1 cut(s)	1119
BseX3I	CGGCCG	1 cut(s)	28
BseXI	GCAGC	5 cut(s)	397, 856, 966, 1192, 1540
BseYI	CCCAGC	1 cut(s)	490
Bsh1285I	CGRYCG	1 cut(s)	31
BshFI	GGCC	9 cut(s)	5, 30, 267, 459, 638, 1046, 1149, 1310, 1565
BshNI	GGYRCC	1 cut(s)	275
BsiEI	CGRYCG	1 cut(s)	31
BsiHKAI	GWGCWC	3 cut(s)	399, 535, 1119
BsiHKCI	CYCGRG	1 cut(s)	1503
BsiSI	CCGG	5 cut(s)	31, 247, 711, 1040, 1391
BslFI	GGGAC	2 cut(s)	661, 924
BslI	CCNNNNNNNGG	3 cut(s)	286, 580, 1561
BsmAI	GTCTC	5 cut(s)	16, 580, 1055, 1314, 1432
BsmFI	GGGAC	2 cut(s)	661, 924
BsmI	GAATGC	1 cut(s)	1453
BsnI	GGCC	9 cut(s)	5, 30, 267, 459, 638, 1046, 1149, 1310, 1565
Bso31I	GGTCTC	2 cut(s)	16, 580
BsoBI	CYCGRG	1 cut(s)	1503
Bsp1286I	GDGCHC	3 cut(s)	399, 535, 1119
Bsp13I	TCCGGA	2 cut(s)	246, 1039
Bsp143I	GATC	2 cut(s)	736, 1543
Bsp19I	CCATGG	3 cut(s)	116, 906, 1209
BspACI	CCGC	3 cut(s)	27, 474, 537
BspANI	GGCC	9 cut(s)	5, 30, 267, 459, 638, 1046, 1149, 1310, 1565
BspCNI	CTCAG	1 cut(s)	328
BspEI	TCCGGA	2 cut(s)	246, 1039
BspLI	GGNNCC	7 cut(s)	35, 277, 676, 677, 996, 1389, 1566
BspT107I	GGYRCC	1 cut(s)	275
BspTNI	GGTCTC	2 cut(s)	16, 580
BsrDI	GCAATG	1 cut(s)	465
BsrFI	RCCGGY	2 cut(s)	30, 1390
BsrI	ACTGG	5 cut(s)	234, 370, 460, 810, 1047
BssAI	RCCGGY	2 cut(s)	30, 1390
BssECI	CCNNGG	5 cut(s)	6, 116, 906, 1209, 1383
BssMI	GATC	2 cut(s)	736, 1543
BssNI	GRCGYC	1 cut(s)	276
BssT1I	CCWWGG	4 cut(s)	6, 116, 906, 1209
Bst2UI	CCWGG	3 cut(s)	575, 1384, 1586
Bst4CI	ACNGT	1 cut(s)	659
Bst6I	CTCTTC	1 cut(s)	840
BstACI	GRCGYC	1 cut(s)	276
BstAPI	GCANNNNNTGC	1 cut(s)	1232
BstBAI	YACGTR	1 cut(s)	272
BstC8I	GCNNGC	5 cut(s)	32, 763, 924, 1119, 1392
BstDEI	CTNAG	5 cut(s)	281, 336, 668, 1009, 1305
BstDSI	CCRYGG	3 cut(s)	116, 906, 1209
BstF5I	GGATG	2 cut(s)	291, 470
BstH2I	RGCGCY	1 cut(s)	279
BstHHI	GCGC	3 cut(s)	278, 432, 573
BstKTI	GATC	2 cut(s)	739, 1546
BstMAI	GTCTC	5 cut(s)	16, 580, 1055, 1314, 1432
BstMBI	GATC	2 cut(s)	736, 1543
BstMCI	CGRYCG	1 cut(s)	31
BstMWI	GCNNNNNNNGC	7 cut(s)	144, 273, 394, 644, 1232, 1400, 1415
BstNI	CCWGG	3 cut(s)	575, 1384, 1586
BstSCI	CCNGG	4 cut(s)	573, 709, 1382, 1584
BstSFI	CTRYAG	3 cut(s)	927, 1284, 1627
BstSLI	GKGCMC	1 cut(s)	1119
BstV1I	GCAGC	5 cut(s)	397, 856, 966, 1192, 1540
BstV2I	GAAGAC	3 cut(s)	63, 69, 75
BstX2I	RGATCY	1 cut(s)	736
BstXI	CCANNNNNNTGG	1 cut(s)	1200
BstYI	RGATCY	1 cut(s)	736
BstZI	CGGCCG	1 cut(s)	28
Bsu36I	CCTNAGG	1 cut(s)	281
BsuI	GTATCC	1 cut(s)	1351
BsuRI	GGCC	9 cut(s)	5, 30, 267, 459, 638, 1046, 1149, 1310, 1565
BtgI	CCRYGG	3 cut(s)	116, 906, 1209
BtsCI	GGATG	2 cut(s)	291, 470
BtsIMutI	CAGTG	1 cut(s)	803
Cac8I	GCNNGC	5 cut(s)	32, 763, 924, 1119, 1392
CfoI	GCGC	3 cut(s)	278, 432, 573
Cfr10I	RCCGGY	2 cut(s)	30, 1390
Cfr13I	GGNCC	6 cut(s)	181, 266, 457, 675, 1564, 1588
Csp6I	GTAC	2 cut(s)	261, 1549
CviAII	CATG	6 cut(s)	117, 433, 907, 1106, 1200, 1210
CviQI	GTAC	2 cut(s)	261, 1549
DdeI	CTNAG	5 cut(s)	281, 336, 668, 1009, 1305
DinI	GGCGCC	1 cut(s)	277
DpnI	GATC	2 cut(s)	738, 1545
DpnII	GATC	2 cut(s)	736, 1543
EaeI	YGGCCR	2 cut(s)	28, 1147
EagI	CGGCCG	1 cut(s)	28
Eam1104I	CTCTTC	1 cut(s)	840
EarI	CTCTTC	1 cut(s)	840
Ecl136II	GAGCTC	1 cut(s)	533
EclXI	CGGCCG	1 cut(s)	28
Eco130I	CCWWGG	4 cut(s)	6, 116, 906, 1209
Eco147I	AGGCCT	1 cut(s)	1310
Eco24I	GRGCYC	1 cut(s)	535
Eco31I	GGTCTC	2 cut(s)	16, 580
Eco47I	GGWCC	3 cut(s)	181, 675, 1588
Eco52I	CGGCCG	1 cut(s)	28
Eco53kI	GAGCTC	1 cut(s)	533
Eco57I	CTGAAG	2 cut(s)	871, 1260
Eco72I	CACGTG	1 cut(s)	272
Eco81I	CCTNAGG	1 cut(s)	281
Eco88I	CYCGRG	1 cut(s)	1503
EcoICRI	GAGCTC	1 cut(s)	533
EcoO109I	RGGNCCY	2 cut(s)	181, 675
EcoRI	GAATTC	1 cut(s)	130
EcoRII	CCWGG	3 cut(s)	573, 1382, 1584
EcoT14I	CCWWGG	4 cut(s)	6, 116, 906, 1209
EcoT38I	GRGCYC	1 cut(s)	535
EgeI	GGCGCC	1 cut(s)	277
EheI	GGCGCC	1 cut(s)	277
ErhI	CCWWGG	4 cut(s)	6, 116, 906, 1209
FaeI	CATG	6 cut(s)	120, 436, 910, 1109, 1203, 1213
FalI	AAGNNNNNCTT	4 cut(s)	784, 816, 1517, 1549
FaqI	GGGAC	2 cut(s)	661, 924
FatI	CATG	6 cut(s)	116, 432, 906, 1105, 1199, 1209
FauI	CCCGC	1 cut(s)	544
Fnu4HI	GCNGC	6 cut(s)	28, 386, 870, 955, 1206, 1529
FokI	GGATG	2 cut(s)	298, 457
FriOI	GRGCYC	1 cut(s)	535
Fsp4HI	GCNGC	6 cut(s)	28, 386, 870, 955, 1206, 1529
FspBI	CTAG	3 cut(s)	92, 135, 1035
GlaI	GCGC	3 cut(s)	277, 431, 572
GluI	GCNGC	6 cut(s)	28, 386, 870, 955, 1206, 1529
GsaI	CCCAGC	1 cut(s)	494
GsuI	CTGGAG	1 cut(s)	1568
HaeII	RGCGCY	1 cut(s)	279
HaeIII	GGCC	9 cut(s)	5, 30, 267, 459, 638, 1046, 1149, 1310, 1565
HapII	CCGG	5 cut(s)	31, 247, 711, 1040, 1391
HhaI	GCGC	3 cut(s)	278, 432, 573
Hin1I	GRCGYC	1 cut(s)	276
Hin1II	CATG	6 cut(s)	120, 436, 910, 1109, 1203, 1213
Hin6I	GCGC	3 cut(s)	276, 430, 571
HinP1I	GCGC	3 cut(s)	276, 430, 571
HincII	GTYRAC	1 cut(s)	616
HindII	GTYRAC	1 cut(s)	616
HindIII	AAGCTT	1 cut(s)	1099
HpaII	CCGG	5 cut(s)	31, 247, 711, 1040, 1391
HphI	GGTGA	1 cut(s)	938
Hpy166II	GTNNAC	6 cut(s)	616, 655, 1025, 1085, 1117, 1551
Hpy188I	TCNGA	2 cut(s)	516, 741
Hpy8I	GTNNAC	6 cut(s)	616, 655, 1025, 1085, 1117, 1551
HpyAV	CCTTC	4 cut(s)	209, 814, 895, 1342
HpyCH4III	ACNGT	1 cut(s)	659
HpyCH4IV	ACGT	1 cut(s)	271
HpyF10VI	GCNNNNNNNGC	7 cut(s)	144, 273, 394, 644, 1232, 1400, 1415
HpyF3I	CTNAG	5 cut(s)	281, 336, 668, 1009, 1305
HpySE526I	ACGT	1 cut(s)	271
Hsp92I	GRCGYC	1 cut(s)	276
Hsp92II	CATG	6 cut(s)	120, 436, 910, 1109, 1203, 1213
HspAI	GCGC	3 cut(s)	276, 430, 571
KasI	GGCGCC	1 cut(s)	275
KflI	GGGWCCC	1 cut(s)	675
Kpn2I	TCCGGA	2 cut(s)	246, 1039
KroI	GCCGGC	2 cut(s)	30, 1390
KroNI	GCCGGC	2 cut(s)	32, 1392
Kzo9I	GATC	2 cut(s)	736, 1543
LmnI	GCTCC	6 cut(s)	39, 437, 538, 937, 1387, 1587
Lsp1109I	GCAGC	5 cut(s)	397, 856, 966, 1192, 1540
LweI	GCATC	5 cut(s)	350, 479, 1235, 1268, 1291
MaeI	CTAG	3 cut(s)	92, 135, 1035
MaeII	ACGT	1 cut(s)	271
MaeIII	GTNAC	1 cut(s)	164
MalI	GATC	2 cut(s)	738, 1545
MboI	GATC	2 cut(s)	736, 1543
MboII	GAAGA	8 cut(s)	63, 69, 75, 695, 731, 857, 1253, 1629
MfeI	CAATTG	5 cut(s)	380, 591, 627, 1230, 1602
MflI	RGATCY	1 cut(s)	736
MhlI	GDGCHC	3 cut(s)	399, 535, 1119
Mly113I	GGCGCC	1 cut(s)	276
MlyI	GAGTC	4 cut(s)	790, 890, 906, 1007
MmeI	TCCRAC	1 cut(s)	1335
MroI	TCCGGA	2 cut(s)	246, 1039
MroNI	GCCGGC	2 cut(s)	30, 1390
MseI	TTAA	5 cut(s)	110, 257, 450, 971, 1065
MslI	CAYNNNNRTG	2 cut(s)	1110, 1198
MspA1I	CMGCKG	1 cut(s)	1644
MspI	CCGG	5 cut(s)	31, 247, 711, 1040, 1391
MspR9I	CCNGG	4 cut(s)	575, 711, 1384, 1586
MunI	CAATTG	5 cut(s)	380, 591, 627, 1230, 1602
Mva1269I	GAATGC	1 cut(s)	1453
MvaI	CCWGG	3 cut(s)	575, 1384, 1586
MwoI	GCNNNNNNNGC	7 cut(s)	144, 273, 394, 644, 1232, 1400, 1415
NaeI	GCCGGC	2 cut(s)	32, 1392
NarI	GGCGCC	1 cut(s)	276
NciI	CCSGG	1 cut(s)	711
NcoI	CCATGG	3 cut(s)	116, 906, 1209
NdeII	GATC	2 cut(s)	736, 1543
NgoMIV	GCCGGC	2 cut(s)	30, 1390
NlaIII	CATG	6 cut(s)	120, 436, 910, 1109, 1203, 1213
NlaIV	GGNNCC	7 cut(s)	35, 277, 676, 677, 996, 1389, 1566
PceI	AGGCCT	1 cut(s)	1310
PcsI	WCGNNNNNNNCGW	1 cut(s)	1552
PctI	GAATGC	1 cut(s)	1453
PdiI	GCCGGC	2 cut(s)	32, 1392
PfeI	GAWTC	6 cut(s)	556, 833, 1173, 1250, 1270, 1481
PflFI	GACNNNGTC	1 cut(s)	500
PflMI	CCANNNNNTGG	1 cut(s)	580
PfoI	TCCNGGA	1 cut(s)	1584
PkrI	GCNGC	6 cut(s)	29, 387, 871, 956, 1207, 1530
PleI	GAGTC	4 cut(s)	789, 889, 906, 1007
PluTI	GGCGCC	1 cut(s)	279
PmaCI	CACGTG	1 cut(s)	272
PmlI	CACGTG	1 cut(s)	272
PpsI	GAGTC	4 cut(s)	789, 889, 906, 1007
Ppu21I	YACGTR	1 cut(s)	272
PpuMI	RGGWCCY	2 cut(s)	181, 675
PsiI	TTATAA	1 cut(s)	695
Psp124BI	GAGCTC	1 cut(s)	535
Psp5II	RGGWCCY	2 cut(s)	181, 675
Psp6I	CCWGG	3 cut(s)	573, 1382, 1584
PspCI	CACGTG	1 cut(s)	272
PspFI	CCCAGC	1 cut(s)	490
PspGI	CCWGG	3 cut(s)	573, 1382, 1584
PspN4I	GGNNCC	7 cut(s)	35, 277, 676, 677, 996, 1389, 1566
PspPI	GGNCC	6 cut(s)	181, 266, 457, 675, 1564, 1588
PspPPI	RGGWCCY	2 cut(s)	181, 675
PsrI	GAACNNNNNNTAC	2 cut(s)	88, 120
PsuI	RGATCY	1 cut(s)	736
PsyI	GACNNNGTC	1 cut(s)	500
PvuII	CAGCTG	1 cut(s)	1644
RsaI	GTAC	2 cut(s)	262, 1550
RsaNI	GTAC	2 cut(s)	261, 1549
RseI	CAYNNNNRTG	2 cut(s)	1110, 1198
SacI	GAGCTC	1 cut(s)	535
SaqAI	TTAA	5 cut(s)	110, 257, 450, 971, 1065
SatI	GCNGC	6 cut(s)	28, 386, 870, 955, 1206, 1529
Sau3AI	GATC	2 cut(s)	736, 1543
Sau96I	GGNCC	6 cut(s)	181, 266, 457, 675, 1564, 1588
SchI	GAGTC	4 cut(s)	790, 890, 906, 1007
ScrFI	CCNGG	4 cut(s)	575, 711, 1384, 1586
SduI	GDGCHC	3 cut(s)	399, 535, 1119
SfaNI	GCATC	5 cut(s)	350, 479, 1235, 1268, 1291
SfcI	CTRYAG	3 cut(s)	927, 1284, 1627
SfoI	GGCGCC	1 cut(s)	277
SinI	GGWCC	3 cut(s)	181, 675, 1588
SmiMI	CAYNNNNRTG	2 cut(s)	1110, 1198
SmlI	CTYRAG	3 cut(s)	291, 412, 778
SmoI	CTYRAG	3 cut(s)	291, 412, 778
SseBI	AGGCCT	1 cut(s)	1310
SsiI	CCGC	3 cut(s)	27, 474, 537
SspDI	GGCGCC	1 cut(s)	275
SspI	AATATT	1 cut(s)	567
SspMI	CTAG	3 cut(s)	92, 135, 1035
SstI	GAGCTC	1 cut(s)	535
StuI	AGGCCT	1 cut(s)	1310
StyD4I	CCNGG	4 cut(s)	573, 709, 1382, 1584
StyI	CCWWGG	4 cut(s)	6, 116, 906, 1209
TaaI	ACNGT	1 cut(s)	659
TaiI	ACGT	1 cut(s)	274
TaqI	TCGA	2 cut(s)	504, 1615
TatI	WGTACW	1 cut(s)	260
TauI	GCSGC	1 cut(s)	30
TfiI	GAWTC	6 cut(s)	556, 833, 1173, 1250, 1270, 1481
Tru1I	TTAA	5 cut(s)	110, 257, 450, 971, 1065
Tru9I	TTAA	5 cut(s)	110, 257, 450, 971, 1065
TscAI	CASTG	1 cut(s)	810
TseI	GCWGC	5 cut(s)	385, 869, 954, 1205, 1528
TspDTI	ATGAA	7 cut(s)	75, 143, 348, 454, 1263, 1361, 1460
TspGWI	ACGGA	1 cut(s)	1376
TspRI	CASTG	1 cut(s)	810
Tth111I	GACNNNGTC	1 cut(s)	500
Van91I	CCANNNNNTGG	1 cut(s)	580
VneI	GTGCAC	1 cut(s)	1115
VpaK11BI	GGWCC	3 cut(s)	181, 675, 1588
XapI	RAATTY	5 cut(s)	130, 355, 509, 742, 966
XcmI	CCANNNNNNNNNTGG	1 cut(s)	386
XspI	CTAG	3 cut(s)	92, 135, 1035

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.