MD14G1019100.v1.1

histidine-containing phosphotransfer protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
1804629 .. 1805852
1224 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1019100.v1.1.491

Sequence Viewer

Length: 420 bp
ATGGTTGTTTCCTTGTTTAGTACCTCGAATCTTTGTTTTTCAATTAGGGTTTGTTTTTGTTTTTCAGATTCTAAGATTGTGATTAACATGGCGTTACCTGGACTCAAGGCACAAATCAAAATTTTAGTCCAATCCATGCTTCATGAGGGTATGTTGGACTACCAGTTTACTCAACTACAAGAGTTGCAAGATTCAAACAATCCCAATTTTGTTGCTGAAATAATCAAGTTGTTTTGTGACAACACAGAACAGGTTATCACAGAGTTAGAGAAATATTTATGTGAAGATGTTGACTTTTGCAAGTTGACTCCTTTTGTTCTTCAACTCCAAGGAAGTAGCTCTAGCATTGGCGCACGGCAAATGACACTAGCTTGTGCTGATCTTCGCCAGGCTTCTGATGACAAAAACAAGGAAGGGTGA

Protein Analysis

140

Amino Acids

15.6

Weight (kDa)

4.64

Isoelectric Point (pI)

42.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 120
AfaI GTAC 1 cut(s) 22
AgsI TTSAA 3 cut(s) 42, 195, 323
AjnI CCWGG 2 cut(s) 97, 387
AjuI GAANNNNNNNTTGG 2 cut(s) 123, 155
AluBI AGCT 2 cut(s) 339, 371
AluI AGCT 2 cut(s) 339, 371
ApoI RAATTY 1 cut(s) 120
ArsI GACNNNNNNTTYG 2 cut(s) 111, 143
AspLEI GCGC 1 cut(s) 353
BceAI ACGGC 1 cut(s) 371
BciT130I CCWGG 2 cut(s) 99, 389
BfaI CTAG 2 cut(s) 342, 368
Bme1390I CCNGG 2 cut(s) 99, 389
BmrFI CCNGG 2 cut(s) 99, 389
BpuEI CTTGAG 1 cut(s) 89
BsaJI CCNNGG 1 cut(s) 328
Bse1I ACTGG 1 cut(s) 163
BseBI CCWGG 2 cut(s) 99, 389
BseDI CCNNGG 1 cut(s) 328
BseNI ACTGG 1 cut(s) 163
Bsp143I GATC 1 cut(s) 379
BspHI TCATGA 1 cut(s) 142
BsrI ACTGG 1 cut(s) 163
BssECI CCNNGG 1 cut(s) 328
BssMI GATC 1 cut(s) 379
BssT1I CCWWGG 1 cut(s) 328
Bst2UI CCWGG 2 cut(s) 99, 389
BstDEI CTNAG 1 cut(s) 72
BstHHI GCGC 1 cut(s) 353
BstKTI GATC 1 cut(s) 382
BstMBI GATC 1 cut(s) 379
BstNI CCWGG 2 cut(s) 99, 389
BstSCI CCNGG 2 cut(s) 97, 387
CciI TCATGA 1 cut(s) 142
CfoI GCGC 1 cut(s) 353
Csp6I GTAC 1 cut(s) 21
CviAII CATG 3 cut(s) 88, 136, 143
CviJI RGCY 3 cut(s) 339, 371, 392
CviKI_1 RGCY 3 cut(s) 339, 371, 392
CviQI GTAC 1 cut(s) 21
DdeI CTNAG 1 cut(s) 72
DpnI GATC 1 cut(s) 381
DpnII GATC 1 cut(s) 379
Eco130I CCWWGG 1 cut(s) 328
EcoRII CCWGG 2 cut(s) 97, 387
EcoT14I CCWWGG 1 cut(s) 328
ErhI CCWWGG 1 cut(s) 328
FaeI CATG 3 cut(s) 91, 139, 146
FaiI YATR 5 cut(s) 89, 137, 144, 152, 280
FatI CATG 3 cut(s) 87, 135, 142
FspBI CTAG 2 cut(s) 342, 368
GlaI GCGC 1 cut(s) 352
HhaI GCGC 1 cut(s) 353
Hin1II CATG 3 cut(s) 91, 139, 146
Hin6I GCGC 1 cut(s) 351
HinP1I GCGC 1 cut(s) 351
HincII GTYRAC 2 cut(s) 292, 306
HindII GTYRAC 2 cut(s) 292, 306
HinfI GANTC 5 cut(s) 28, 68, 102, 191, 307
Hpy166II GTNNAC 3 cut(s) 168, 292, 306
Hpy188I TCNGA 2 cut(s) 67, 397
Hpy188III TCNNGA 1 cut(s) 143
Hpy8I GTNNAC 3 cut(s) 168, 292, 306
HpyAV CCTTC 1 cut(s) 407
HpyCH4V TGCA 2 cut(s) 187, 300
HpyF3I CTNAG 1 cut(s) 72
Hsp92II CATG 3 cut(s) 91, 139, 146
HspAI GCGC 1 cut(s) 351
Kzo9I GATC 1 cut(s) 379
LpnPI CCDG 6 cut(s) 84, 111, 176, 236, 374, 401
MaeI CTAG 2 cut(s) 342, 368
MaeIII GTNAC 2 cut(s) 93, 236
MalI GATC 1 cut(s) 381
MboI GATC 1 cut(s) 379
MboII GAAGA 3 cut(s) 296, 311, 374
MluCI AATT 3 cut(s) 42, 120, 205
MlyI GAGTC 2 cut(s) 96, 301
MmeI TCCRAC 1 cut(s) 135
MnlI CCTC 2 cut(s) 34, 139
MseI TTAA 1 cut(s) 84
MspR9I CCNGG 2 cut(s) 99, 389
MvaI CCWGG 2 cut(s) 99, 389
NdeII GATC 1 cut(s) 379
NlaIII CATG 3 cut(s) 91, 139, 146
NmuCI GTSAC 1 cut(s) 236
PagI TCATGA 1 cut(s) 142
PfeI GAWTC 3 cut(s) 28, 68, 191
PleI GAGTC 2 cut(s) 96, 301
PpsI GAGTC 2 cut(s) 96, 301
Psp6I CCWGG 2 cut(s) 97, 387
PspGI CCWGG 2 cut(s) 97, 387
RsaI GTAC 1 cut(s) 22
RsaNI GTAC 1 cut(s) 21
SaqAI TTAA 1 cut(s) 84
Sau3AI GATC 1 cut(s) 379
SchI GAGTC 2 cut(s) 96, 301
ScrFI CCNGG 2 cut(s) 99, 389
SetI ASST 5 cut(s) 26, 100, 255, 341, 373
SmlI CTYRAG 1 cut(s) 104
SmoI CTYRAG 1 cut(s) 104
Sse9I AATT 3 cut(s) 42, 120, 205
SspI AATATT 1 cut(s) 275
SspMI CTAG 2 cut(s) 342, 368
StyD4I CCNGG 2 cut(s) 97, 387
StyI CCWWGG 1 cut(s) 328
TaqI TCGA 1 cut(s) 26
TasI AATT 3 cut(s) 42, 120, 205
TfiI GAWTC 3 cut(s) 28, 68, 191
Tru1I TTAA 1 cut(s) 84
Tru9I TTAA 1 cut(s) 84
TseFI GTSAC 1 cut(s) 236
Tsp45I GTSAC 1 cut(s) 236
TspDTI ATGAA 1 cut(s) 131
XapI RAATTY 1 cut(s) 120
XspI CTAG 2 cut(s) 342, 368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.