Rh3CG053000

histidine-containing phosphotransfer protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Reverse (-)
3662065 .. 3667256
5192 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG053000.1

Sequence Viewer

Length: 339 bp
ATGGCTGGTGTGTCTCAGTTGCAGAAGCAGTTTGGTGACTACAAAGCCTCACTCTTTCAAGAGGGGGTTCTGGATGAACAGTTTGACCAACTTCAGGGACTACAAGATGAGAGCAACCCAAATTTTGTGGTTGAAGTGGTGTCTCTCTTCTTTCAAGATTCTGAGAGGCTTCTCAATGACCTGACCAAGACTCTAAACCAGCAGGGTGTTGACTTCAAAAAGGTCGGTGCCAATGTTCATCAGTTGAAGGGTAGCAGCTCCAGCATTGGTGCTCAGAGGGTTCAGAGAGTCTGCATTGCATTTCGTAACTACGGTGAGGAGCACAACATTGAAGGGTGA

Protein Analysis

112

Amino Acids

12.54

Weight (kDa)

4.87

Isoelectric Point (pI)

43.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hpt PF01627 45 - 104 4.2e-13 Hpt domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 227
AcsI RAATTY 1 cut(s) 121
AcuI CTGAAG 1 cut(s) 77
AfiI CCNNNNNNNGG 1 cut(s) 94
AgsI TTSAA 6 cut(s) 59, 134, 155, 217, 247, 332
AluBI AGCT 1 cut(s) 258
AluI AGCT 1 cut(s) 258
Alw21I GWGCWC 2 cut(s) 274, 324
Alw26I GTCTC 2 cut(s) 18, 147
ApeKI GCWGC 1 cut(s) 255
ApoI RAATTY 1 cut(s) 121
AsuHPI GGTGA 2 cut(s) 47, 326
BanI GGYRCC 1 cut(s) 227
Bbv12I GWGCWC 2 cut(s) 274, 324
BbvI GCAGC 1 cut(s) 267
BcoDI GTCTC 2 cut(s) 18, 147
BisI GCNGC 1 cut(s) 256
BlsI GCNGC 1 cut(s) 257
BmiI GGNNCC 1 cut(s) 229
BpmI CTGGAG 1 cut(s) 244
Bsc4I CCNNNNNNNGG 1 cut(s) 94
Bse3DI GCAATG 1 cut(s) 294
BseGI GGATG 1 cut(s) 79
BseLI CCNNNNNNNGG 1 cut(s) 94
BseMI GCAATG 1 cut(s) 294
BseMII CTCAG 3 cut(s) 29, 153, 287
BseRI GAGGAG 1 cut(s) 332
BseXI GCAGC 1 cut(s) 267
BshNI GGYRCC 1 cut(s) 227
BsiHKAI GWGCWC 2 cut(s) 274, 324
BslFI GGGAC 1 cut(s) 111
BslI CCNNNNNNNGG 1 cut(s) 94
BsmAI GTCTC 2 cut(s) 18, 147
BsmFI GGGAC 1 cut(s) 111
Bsp1286I GDGCHC 2 cut(s) 274, 324
BspCNI CTCAG 3 cut(s) 28, 154, 286
BspLI GGNNCC 1 cut(s) 229
BspT107I GGYRCC 1 cut(s) 227
BsrDI GCAATG 1 cut(s) 294
Bst4CI ACNGT 2 cut(s) 81, 314
Bst6I CTCTTC 1 cut(s) 152
BstDEI CTNAG 3 cut(s) 15, 162, 273
BstF5I GGATG 1 cut(s) 79
BstMAI GTCTC 2 cut(s) 18, 147
BstMWI GCNNNNNNNGC 1 cut(s) 261
BstV1I GCAGC 1 cut(s) 267
BtsCI GGATG 1 cut(s) 79
CspCI CAANNNNNGTGG 2 cut(s) 108, 143
CviJI RGCY 4 cut(s) 5, 47, 169, 258
CviKI_1 RGCY 4 cut(s) 5, 47, 169, 258
DdeI CTNAG 3 cut(s) 15, 162, 273
Eam1104I CTCTTC 1 cut(s) 152
EarI CTCTTC 1 cut(s) 152
Eco57I CTGAAG 1 cut(s) 77
FaqI GGGAC 1 cut(s) 111
Fnu4HI GCNGC 1 cut(s) 256
FokI GGATG 1 cut(s) 86
Fsp4HI GCNGC 1 cut(s) 256
GluI GCNGC 1 cut(s) 256
GsuI CTGGAG 1 cut(s) 244
HincII GTYRAC 1 cut(s) 211
HindII GTYRAC 1 cut(s) 211
HinfI GANTC 3 cut(s) 158, 190, 288
HphI GGTGA 2 cut(s) 47, 326
Hpy166II GTNNAC 1 cut(s) 211
Hpy188I TCNGA 3 cut(s) 163, 276, 285
Hpy188III TCNNGA 3 cut(s) 59, 71, 155
Hpy8I GTNNAC 1 cut(s) 211
HpyAV CCTTC 2 cut(s) 241, 326
HpyCH4III ACNGT 2 cut(s) 81, 314
HpyCH4V TGCA 3 cut(s) 22, 294, 299
HpyF10VI GCNNNNNNNGC 1 cut(s) 261
HpyF3I CTNAG 3 cut(s) 15, 162, 273
LmnI GCTCC 2 cut(s) 263, 319
LpnPI CCDG 6 cut(s) 56, 80, 188, 194, 212, 274
Lsp1109I GCAGC 1 cut(s) 267
MaeIII GTNAC 2 cut(s) 35, 305
MboII GAAGA 1 cut(s) 139
MhlI GDGCHC 2 cut(s) 274, 324
MluCI AATT 1 cut(s) 121
MlyI GAGTC 2 cut(s) 184, 297
MnlI CCTC 5 cut(s) 55, 58, 159, 270, 310
MwoI GCNNNNNNNGC 1 cut(s) 261
NlaIV GGNNCC 1 cut(s) 229
NmuCI GTSAC 1 cut(s) 35
PfeI GAWTC 1 cut(s) 158
PkrI GCNGC 1 cut(s) 257
PleI GAGTC 2 cut(s) 184, 296
PpsI GAGTC 2 cut(s) 184, 296
PspN4I GGNNCC 1 cut(s) 229
SatI GCNGC 1 cut(s) 256
SchI GAGTC 2 cut(s) 184, 297
SduI GDGCHC 2 cut(s) 274, 324
SetI ASST 3 cut(s) 183, 225, 260
Sse9I AATT 1 cut(s) 121
TaaI ACNGT 2 cut(s) 81, 314
TasI AATT 1 cut(s) 121
TfiI GAWTC 1 cut(s) 158
TseFI GTSAC 1 cut(s) 35
TseI GCWGC 1 cut(s) 255
Tsp45I GTSAC 1 cut(s) 35
TspDTI ATGAA 2 cut(s) 90, 227
XapI RAATTY 1 cut(s) 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.