Rmu_sc0003510.1_g000016

histidine-containing phosphotransfer protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003510.1
Physical Location & Seq
Forward (+)
56680 .. 59618
2939 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003510.1_g000016.1.cds

Sequence Viewer

Length: 1389 bp
atgaggctgcacatgaagaaaattctctctcaatcaagattaggagttgaggggaagcataaaatggctctccaccctagccgccttaggctgaggcttcaatggcgatgtttatcatcaatcactttctcaatctatgccaactctttacccgttggggagaaaggtggacactaccaagaaggcgtcggcggcagacctccaaggacgagcctcgtgcactttcctccaagcggcaacggtggcttgctcctagaagcgggtaaagtttgcggcaattggcggtatggtgctcttgcatccgccgtttctgatgaatcggatctccgacttggctcaagatgggggcggataggaggctggccctcgggtttgaacttgaggaggccttgttctggcatcatcgagctctgggatctgaggaaaatggtgaggccgacggttcatcgccgaagcaaacttgtaaaggaagaagagtctgatgacggtggtcggtctcggccacgtcgggggagtctcaaggtggatgaaagtcttgatgattctcggtgttggattagagttttgcgagatctgaattgggttgtggatccgggtcggagacgagatggcctacatcttgtatgtgcggcgaaggtggaggccgtgacagtgatcggagcaagagtcaagtttgcagcccaattctgggaagctttgggtgcccagatcattttgggtgctcaaaatagattgggtgtcaagtttgtggattttggccaagtttggaccaaacaggcaggctccggcttactagggtttcggttatgggatcctggtggagggtatgggctcataaggcttttctttagccttcctttgaagtcttttatgtactatgcttatttactatgcaatcgtttcgatcatggtaagataggcctatttagaataagtgagcatggatgttcgttgcatcttgtatgtgcggcgaaggtggagaccgtgacagtgatcggagcaagagtagcccaattctgggaagctttgggtgcccagatcattttgggtgctcaaaatagattgggtgtcaagtttgtggattttggccaagtttggaccaaacaggcaggctccggcttactagggtttcggttatgggatcctggtggaggcattggagcatatcaaatgcgtcttgctactgttgaccttgttaaagctgttgatgaaaaggacaaggaaaagtccttggaggccttgaagaaagtcacacatgagtacctgagaatacagtacaaattgcagaccattattcagctggagaacaagatgtgtgatattgaatccaaaccactattacacgatggaaattgtgcagcagggccttcatatacaaaagatatataa

Protein Analysis

462

Amino Acids

51.43

Weight (kDa)

9.79

Isoelectric Point (pI)

39.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 701, 1031
AclWI GGATC 8 cut(s) 330, 423, 584, 597, 806, 819, 1136, 1149
AcoI YGGCCR 3 cut(s) 500, 757, 1087
AcsI RAATTY 1 cut(s) 21
AcyI GRCGYC 1 cut(s) 186
AfaI GTAC 3 cut(s) 875, 1262, 1277
AgsI TTSAA 5 cut(s) 101, 376, 862, 1243, 1325
AjiI CACGTC 1 cut(s) 506
AjnI CCWGG 2 cut(s) 814, 1144
AloI GAACNNNNNNTCC 2 cut(s) 376, 408
AluBI AGCT 5 cut(s) 409, 695, 1025, 1202, 1300
AluI AGCT 5 cut(s) 409, 695, 1025, 1202, 1300
Alw21I GWGCWC 5 cut(s) 222, 295, 411, 724, 1054
Alw26I GTCTC 4 cut(s) 501, 521, 595, 974
Alw44I GTGCAC 1 cut(s) 218
AlwI GGATC 8 cut(s) 330, 423, 584, 597, 806, 819, 1136, 1149
Ama87I CYCGRG 1 cut(s) 367
ApaLI GTGCAC 1 cut(s) 218
ApeKI GCWGC 3 cut(s) 7, 677, 1358
ApoI RAATTY 1 cut(s) 21
AspS9I GGNCC 4 cut(s) 363, 768, 1098, 1364
AsuC2I CCSGG 1 cut(s) 594
AsuHPI GGTGA 1 cut(s) 442
AvaI CYCGRG 1 cut(s) 367
AvaII GGWCC 2 cut(s) 768, 1098
AxyI CCTNAGG 1 cut(s) 86
BaeGI GKGCMC 3 cut(s) 222, 706, 1036
BaeI ACNNNNGTAYC 2 cut(s) 1244, 1277
BalI TGGCCA 2 cut(s) 759, 1089
BamHI GGATCC 3 cut(s) 589, 811, 1141
BanI GGYRCC 2 cut(s) 701, 1031
BanII GRGCYC 2 cut(s) 411, 834
BauI CACGAG 1 cut(s) 215
Bbv12I GWGCWC 5 cut(s) 222, 295, 411, 724, 1054
BbvCI CCTCAGC 1 cut(s) 92
BbvI GCAGC 2 cut(s) 689, 1370
BccI CCATC 3 cut(s) 336, 602, 1340
BceAI ACGGC 2 cut(s) 290, 629
BcgI CGANNNNNNTGC 4 cut(s) 199, 233, 883, 917
BciT130I CCWGG 2 cut(s) 816, 1146
BcnI CCSGG 1 cut(s) 594
BcoDI GTCTC 4 cut(s) 501, 521, 595, 974
BfaI CTAG 4 cut(s) 78, 254, 794, 1124
BglII AGATCT 1 cut(s) 571
BisI GCNGC 9 cut(s) 8, 82, 193, 235, 274, 630, 678, 969, 1359
BlsI GCNGC 9 cut(s) 9, 83, 194, 236, 275, 631, 679, 970, 1360
Bme1390I CCNGG 3 cut(s) 594, 816, 1146
Bme18I GGWCC 2 cut(s) 768, 1098
BmeT110I CYCGRG 1 cut(s) 367
BmgBI CACGTC 1 cut(s) 506
BmgT120I GGNCC 4 cut(s) 363, 768, 1098, 1364
BmiI GGNNCC 7 cut(s) 591, 703, 784, 813, 1033, 1114, 1143
BmrFI CCNGG 3 cut(s) 594, 816, 1146
BmsI GCATC 3 cut(s) 308, 408, 964
BoxI GACNNNNGTC 1 cut(s) 489
BpmI CTGGAG 1 cut(s) 1322
Bpu10I CCTNAGC 1 cut(s) 92
BpuEI CTTGAG 3 cut(s) 322, 400, 503
BpuMI CCSGG 1 cut(s) 594
BsaBI GATNNNNATC 1 cut(s) 112
BsaHI GRCGYC 1 cut(s) 186
BsaI GGTCTC 2 cut(s) 501, 974
BsaJI CCNNGG 3 cut(s) 203, 366, 1230
BsaXI ACNNNNNCTCC 6 cut(s) 376, 406, 651, 681, 990, 1020
Bse21I CCTNAGG 1 cut(s) 86
Bse8I GATNNNNATC 1 cut(s) 112
BseBI CCWGG 2 cut(s) 816, 1146
BseDI CCNNGG 3 cut(s) 203, 366, 1230
BseGI GGATG 3 cut(s) 299, 532, 950
BseJI GATNNNNATC 1 cut(s) 112
BseMII CTCAG 3 cut(s) 83, 410, 1256
BseRI GAGGAG 1 cut(s) 397
BseSI GKGCMC 3 cut(s) 222, 706, 1036
BseXI GCAGC 2 cut(s) 689, 1370
BsgI GTGCAG 1 cut(s) 1377
BshNI GGYRCC 2 cut(s) 701, 1031
BsiHKAI GWGCWC 5 cut(s) 222, 295, 411, 724, 1054
BsiHKCI CYCGRG 1 cut(s) 367
BsiSI CCGG 3 cut(s) 593, 786, 1116
BsmAI GTCTC 4 cut(s) 501, 521, 595, 974
BsmBI CGTCTC 1 cut(s) 595
Bso31I GGTCTC 2 cut(s) 501, 974
BsoBI CYCGRG 1 cut(s) 367
Bsp1286I GDGCHC 8 cut(s) 222, 295, 411, 706, 724, 834, 1036, 1054
BspCNI CTCAG 3 cut(s) 84, 411, 1257
BspLI GGNNCC 7 cut(s) 591, 703, 784, 813, 1033, 1114, 1143
BspPI GGATC 8 cut(s) 330, 423, 584, 597, 806, 819, 1136, 1149
BspT107I GGYRCC 2 cut(s) 701, 1031
BspTNI GGTCTC 2 cut(s) 501, 974
BssECI CCNNGG 3 cut(s) 203, 366, 1230
BssNI GRCGYC 1 cut(s) 186
BssSI CACGAG 1 cut(s) 215
BssT1I CCWWGG 2 cut(s) 203, 1230
Bst2BI CACGAG 1 cut(s) 215
Bst2UI CCWGG 2 cut(s) 816, 1146
Bst4CI ACNGT 8 cut(s) 242, 442, 488, 652, 985, 991, 1186, 1275
Bst6I CTCTTC 1 cut(s) 468
BstACI GRCGYC 1 cut(s) 186
BstC8I GCNNGC 4 cut(s) 248, 362, 781, 1111
BstDEI CTNAG 4 cut(s) 86, 92, 419, 1265
BstENI CCTNNNNNAGG 2 cut(s) 819, 1149
BstF5I GGATG 3 cut(s) 299, 532, 950
BstMAI GTCTC 4 cut(s) 501, 521, 595, 974
BstMWI GCNNNNNNNGC 7 cut(s) 103, 192, 243, 701, 838, 1007, 1031
BstNI CCWGG 2 cut(s) 816, 1146
BstPAI GACNNNNGTC 1 cut(s) 489
BstSCI CCNGG 3 cut(s) 592, 814, 1144
BstSLI GKGCMC 3 cut(s) 222, 706, 1036
BstV1I GCAGC 2 cut(s) 689, 1370
BstX2I RGATCY 6 cut(s) 322, 415, 571, 589, 811, 1141
BstYI RGATCY 6 cut(s) 322, 415, 571, 589, 811, 1141
Bsu36I CCTNAGG 1 cut(s) 86
BtgZI GCGATG 2 cut(s) 121, 431
BtrI CACGTC 1 cut(s) 506
BtsCI GGATG 3 cut(s) 299, 532, 950
BtsIMutI CAGTG 2 cut(s) 657, 996
Cac8I GCNNGC 4 cut(s) 248, 362, 781, 1111
Cfr13I GGNCC 4 cut(s) 363, 768, 1098, 1364
CseI GACGC 2 cut(s) 175, 1163
Csp6I GTAC 3 cut(s) 874, 1261, 1276
CviAII CATG 4 cut(s) 13, 908, 941, 1256
CviQI GTAC 3 cut(s) 874, 1261, 1276
DdeI CTNAG 4 cut(s) 86, 92, 419, 1265
EaeI YGGCCR 3 cut(s) 500, 757, 1087
Eam1104I CTCTTC 1 cut(s) 468
EarI CTCTTC 1 cut(s) 468
EciI GGCGGA 2 cut(s) 292, 364
Ecl136II GAGCTC 1 cut(s) 409
Eco130I CCWWGG 2 cut(s) 203, 1230
Eco147I AGGCCT 3 cut(s) 388, 921, 1238
Eco24I GRGCYC 2 cut(s) 411, 834
Eco31I GGTCTC 2 cut(s) 501, 974
Eco47I GGWCC 2 cut(s) 768, 1098
Eco53kI GAGCTC 1 cut(s) 409
Eco81I CCTNAGG 1 cut(s) 86
Eco88I CYCGRG 1 cut(s) 367
EcoICRI GAGCTC 1 cut(s) 409
EcoNI CCTNNNNNAGG 2 cut(s) 819, 1149
EcoO109I RGGNCCY 1 cut(s) 1364
EcoRII CCWGG 2 cut(s) 814, 1144
EcoT14I CCWWGG 2 cut(s) 203, 1230
EcoT38I GRGCYC 2 cut(s) 411, 834
ErhI CCWWGG 2 cut(s) 203, 1230
Esp3I CGTCTC 1 cut(s) 595
FaeI CATG 4 cut(s) 16, 911, 944, 1259
FatI CATG 4 cut(s) 12, 907, 940, 1255
FauI CCCGC 1 cut(s) 253
Fnu4HI GCNGC 9 cut(s) 8, 82, 193, 235, 274, 630, 678, 969, 1359
FokI GGATG 3 cut(s) 286, 539, 957
FriOI GRGCYC 2 cut(s) 411, 834
Fsp4HI GCNGC 9 cut(s) 8, 82, 193, 235, 274, 630, 678, 969, 1359
FspBI CTAG 4 cut(s) 78, 254, 794, 1124
GluI GCNGC 9 cut(s) 8, 82, 193, 235, 274, 630, 678, 969, 1359
GsuI CTGGAG 1 cut(s) 1322
HapII CCGG 3 cut(s) 593, 786, 1116
HgaI GACGC 2 cut(s) 175, 1163
Hin1I GRCGYC 1 cut(s) 186
Hin1II CATG 4 cut(s) 16, 911, 944, 1259
HincII GTYRAC 1 cut(s) 1189
HindII GTYRAC 1 cut(s) 1189
HindIII AAGCTT 2 cut(s) 693, 1023
HinfI GANTC 6 cut(s) 317, 476, 514, 542, 666, 1325
HpaII CCGG 3 cut(s) 593, 786, 1116
HphI GGTGA 1 cut(s) 442
Hpy166II GTNNAC 3 cut(s) 170, 220, 1189
Hpy188I TCNGA 9 cut(s) 313, 322, 329, 420, 481, 576, 600, 659, 998
Hpy188III TCNNGA 3 cut(s) 36, 339, 536
Hpy8I GTNNAC 3 cut(s) 170, 220, 1189
Hpy99I CGWCG 3 cut(s) 191, 442, 510
HpyAV CCTTC 5 cut(s) 176, 628, 863, 967, 1377
HpyCH4III ACNGT 8 cut(s) 242, 442, 488, 652, 985, 991, 1186, 1275
HpyCH4IV ACGT 1 cut(s) 505
HpyCH4V TGCA 8 cut(s) 10, 220, 299, 677, 894, 955, 1285, 1358
HpyF10VI GCNNNNNNNGC 7 cut(s) 103, 192, 243, 701, 838, 1007, 1031
HpyF3I CTNAG 4 cut(s) 86, 92, 419, 1265
HpySE526I ACGT 1 cut(s) 505
Hsp92I GRCGYC 1 cut(s) 186
Hsp92II CATG 4 cut(s) 16, 911, 944, 1259
LmnI GCTCC 6 cut(s) 255, 659, 788, 998, 1118, 1160
Lsp1109I GCAGC 2 cut(s) 689, 1370
LweI GCATC 3 cut(s) 308, 408, 964
MaeI CTAG 4 cut(s) 78, 254, 794, 1124
MaeII ACGT 1 cut(s) 505
MaeIII GTNAC 3 cut(s) 646, 985, 1249
MboII GAAGA 4 cut(s) 28, 482, 485, 1255
MfeI CAATTG 1 cut(s) 277
MflI RGATCY 6 cut(s) 322, 415, 571, 589, 811, 1141
MhlI GDGCHC 8 cut(s) 222, 295, 411, 706, 724, 834, 1036, 1054
MlsI TGGCCA 2 cut(s) 759, 1089
MluCI AATT 7 cut(s) 21, 277, 577, 683, 1013, 1280, 1351
MluNI TGGCCA 2 cut(s) 759, 1089
MlyI GAGTC 3 cut(s) 485, 523, 675
MmeI TCCRAC 3 cut(s) 352, 533, 578
Mox20I TGGCCA 2 cut(s) 759, 1089
MscI TGGCCA 2 cut(s) 759, 1089
MseI TTAA 1 cut(s) 1197
Msp20I TGGCCA 2 cut(s) 759, 1089
MspA1I CMGCKG 1 cut(s) 1300
MspI CCGG 3 cut(s) 593, 786, 1116
MspR9I CCNGG 3 cut(s) 594, 816, 1146
MunI CAATTG 1 cut(s) 277
MvaI CCWGG 2 cut(s) 816, 1146
MwoI GCNNNNNNNGC 7 cut(s) 103, 192, 243, 701, 838, 1007, 1031
NciI CCSGG 1 cut(s) 594
NlaIII CATG 4 cut(s) 16, 911, 944, 1259
NlaIV GGNNCC 7 cut(s) 591, 703, 784, 813, 1033, 1114, 1143
NmeAIII GCCGAG 1 cut(s) 478
NmuCI GTSAC 3 cut(s) 646, 985, 1249
PceI AGGCCT 3 cut(s) 388, 921, 1238
PfeI GAWTC 3 cut(s) 317, 542, 1325
PkrI GCNGC 9 cut(s) 9, 83, 194, 236, 275, 631, 679, 970, 1360
PleI GAGTC 3 cut(s) 484, 522, 674
PpsI GAGTC 3 cut(s) 484, 522, 674
PshAI GACNNNNGTC 1 cut(s) 489
Psp124BI GAGCTC 1 cut(s) 411
Psp6I CCWGG 2 cut(s) 814, 1144
PspGI CCWGG 2 cut(s) 814, 1144
PspN4I GGNNCC 7 cut(s) 591, 703, 784, 813, 1033, 1114, 1143
PspPI GGNCC 4 cut(s) 363, 768, 1098, 1364
PsuI RGATCY 6 cut(s) 322, 415, 571, 589, 811, 1141
PvuII CAGCTG 1 cut(s) 1300
RsaI GTAC 3 cut(s) 875, 1262, 1277
RsaNI GTAC 3 cut(s) 874, 1261, 1276
SacI GAGCTC 1 cut(s) 411
SaqAI TTAA 1 cut(s) 1197
SatI GCNGC 9 cut(s) 8, 82, 193, 235, 274, 630, 678, 969, 1359
Sau96I GGNCC 4 cut(s) 363, 768, 1098, 1364
SchI GAGTC 3 cut(s) 485, 523, 675
ScrFI CCNGG 3 cut(s) 594, 816, 1146
SduI GDGCHC 8 cut(s) 222, 295, 411, 706, 724, 834, 1036, 1054
SfaNI GCATC 3 cut(s) 308, 408, 964
SinI GGWCC 2 cut(s) 768, 1098
SmlI CTYRAG 3 cut(s) 337, 379, 518
SmoI CTYRAG 3 cut(s) 337, 379, 518
Sse9I AATT 7 cut(s) 21, 277, 577, 683, 1013, 1280, 1351
SseBI AGGCCT 3 cut(s) 388, 921, 1238
SspMI CTAG 4 cut(s) 78, 254, 794, 1124
SstI GAGCTC 1 cut(s) 411
StuI AGGCCT 3 cut(s) 388, 921, 1238
StyD4I CCNGG 3 cut(s) 592, 814, 1144
StyI CCWWGG 2 cut(s) 203, 1230
TaaI ACNGT 8 cut(s) 242, 442, 488, 652, 985, 991, 1186, 1275
TaiI ACGT 1 cut(s) 508
TaqI TCGA 2 cut(s) 405, 903
TaqII GACCGA 1 cut(s) 483
TasI AATT 7 cut(s) 21, 277, 577, 683, 1013, 1280, 1351
TatI WGTACW 2 cut(s) 873, 1275
TauI GCSGC 6 cut(s) 84, 195, 237, 276, 632, 971
TfiI GAWTC 3 cut(s) 317, 542, 1325
Tru1I TTAA 1 cut(s) 1197
Tru9I TTAA 1 cut(s) 1197
TscAI CASTG 2 cut(s) 657, 996
TseFI GTSAC 3 cut(s) 646, 985, 1249
TseI GCWGC 3 cut(s) 7, 677, 1358
Tsp45I GTSAC 3 cut(s) 646, 985, 1249
TspDTI ATGAA 6 cut(s) 29, 330, 434, 543, 1224, 1359
TspRI CASTG 2 cut(s) 657, 996
VneI GTGCAC 1 cut(s) 218
VpaK11BI GGWCC 2 cut(s) 768, 1098
XagI CCTNNNNNAGG 2 cut(s) 819, 1149
XapI RAATTY 1 cut(s) 21
XcmI CCANNNNNNNNNTGG 1 cut(s) 1297
XspI CTAG 4 cut(s) 78, 254, 794, 1124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.