Rh3DG260200

histidine-containing phosphotransfer protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Reverse (-)
25782180 .. 25785843
3664 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG260200.1

Sequence Viewer

Length: 309 bp
ATGGCTGGTGTGTCTCAGTTGCAGAAGCAGTTTGTTGACTACAAAGCCTCACTCTTTCAAGAGGGGGTTCTGGATGAACAGTTTGACCAACTTCAGGGACTACAAGATGAGAGCAACCCAAATTTTGTGGTTGAAGTGGTGTCTCTCTTCTTTCAAGATTCTGAGAGGCTTCTCAATGACCTGACCAAGACTCTAAACCAGCAGGGTGTTGACTTCAAAAAGGTCGGTGCCAATGTTCATCAGTTGAAGGGTAGCAGCTCCAGAAGTGGAGTGCTATTGCAGGAGCATGACTATCAAAAAATTTTCTGA

Protein Analysis

102

Amino Acids

11.57

Weight (kDa)

4.8

Isoelectric Point (pI)

41.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hpt PF01627 45 - 87 7.6e-07 Hpt domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 227
AcsI RAATTY 2 cut(s) 121, 300
AcuI CTGAAG 1 cut(s) 77
AfiI CCNNNNNNNGG 1 cut(s) 94
AgsI TTSAA 5 cut(s) 59, 134, 155, 217, 247
AluBI AGCT 1 cut(s) 258
AluI AGCT 1 cut(s) 258
Alw26I GTCTC 2 cut(s) 18, 147
ApeKI GCWGC 1 cut(s) 255
ApoI RAATTY 2 cut(s) 121, 300
BanI GGYRCC 1 cut(s) 227
BbvI GCAGC 1 cut(s) 267
BcoDI GTCTC 2 cut(s) 18, 147
BisI GCNGC 1 cut(s) 256
BlsI GCNGC 1 cut(s) 257
BmiI GGNNCC 1 cut(s) 229
BpmI CTGGAG 1 cut(s) 244
Bsc4I CCNNNNNNNGG 1 cut(s) 94
BseGI GGATG 1 cut(s) 79
BseLI CCNNNNNNNGG 1 cut(s) 94
BseMII CTCAG 2 cut(s) 29, 153
BseXI GCAGC 1 cut(s) 267
BshNI GGYRCC 1 cut(s) 227
BslFI GGGAC 1 cut(s) 111
BslI CCNNNNNNNGG 1 cut(s) 94
BsmAI GTCTC 2 cut(s) 18, 147
BsmFI GGGAC 1 cut(s) 111
BspCNI CTCAG 2 cut(s) 28, 154
BspLI GGNNCC 1 cut(s) 229
BspT107I GGYRCC 1 cut(s) 227
Bst4CI ACNGT 1 cut(s) 81
Bst6I CTCTTC 1 cut(s) 152
BstDEI CTNAG 2 cut(s) 15, 162
BstF5I GGATG 1 cut(s) 79
BstMAI GTCTC 2 cut(s) 18, 147
BstV1I GCAGC 1 cut(s) 267
BtsCI GGATG 1 cut(s) 79
CspCI CAANNNNNGTGG 2 cut(s) 108, 143
CviAII CATG 1 cut(s) 287
CviJI RGCY 4 cut(s) 5, 47, 169, 258
CviKI_1 RGCY 4 cut(s) 5, 47, 169, 258
DdeI CTNAG 2 cut(s) 15, 162
Eam1104I CTCTTC 1 cut(s) 152
EarI CTCTTC 1 cut(s) 152
Eco57I CTGAAG 1 cut(s) 77
FaeI CATG 1 cut(s) 290
FaiI YATR 1 cut(s) 288
FaqI GGGAC 1 cut(s) 111
FatI CATG 1 cut(s) 286
Fnu4HI GCNGC 1 cut(s) 256
FokI GGATG 1 cut(s) 86
Fsp4HI GCNGC 1 cut(s) 256
GluI GCNGC 1 cut(s) 256
GsuI CTGGAG 1 cut(s) 244
Hin1II CATG 1 cut(s) 290
HincII GTYRAC 2 cut(s) 37, 211
HindII GTYRAC 2 cut(s) 37, 211
HinfI GANTC 2 cut(s) 158, 190
Hpy166II GTNNAC 2 cut(s) 37, 211
Hpy188I TCNGA 2 cut(s) 163, 308
Hpy188III TCNNGA 4 cut(s) 59, 71, 155, 261
Hpy8I GTNNAC 2 cut(s) 37, 211
HpyAV CCTTC 1 cut(s) 241
HpyCH4III ACNGT 1 cut(s) 81
HpyCH4V TGCA 2 cut(s) 22, 280
HpyF3I CTNAG 2 cut(s) 15, 162
Hsp92II CATG 1 cut(s) 290
LmnI GCTCC 2 cut(s) 263, 283
LpnPI CCDG 7 cut(s) 56, 80, 188, 194, 212, 266, 274
Lsp1109I GCAGC 1 cut(s) 267
MboII GAAGA 1 cut(s) 139
MluCI AATT 2 cut(s) 121, 300
MlyI GAGTC 1 cut(s) 184
MnlI CCTC 3 cut(s) 55, 58, 159
NlaIII CATG 1 cut(s) 290
NlaIV GGNNCC 1 cut(s) 229
PfeI GAWTC 1 cut(s) 158
PkrI GCNGC 1 cut(s) 257
PleI GAGTC 1 cut(s) 184
PpsI GAGTC 1 cut(s) 184
PspN4I GGNNCC 1 cut(s) 229
SatI GCNGC 1 cut(s) 256
SchI GAGTC 1 cut(s) 184
SetI ASST 3 cut(s) 183, 225, 260
Sse9I AATT 2 cut(s) 121, 300
TaaI ACNGT 1 cut(s) 81
TasI AATT 2 cut(s) 121, 300
TfiI GAWTC 1 cut(s) 158
TseI GCWGC 1 cut(s) 255
TspDTI ATGAA 2 cut(s) 90, 227
XapI RAATTY 2 cut(s) 121, 300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.