DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G68990 AT1G68990 |
| fragaria_vesca | FvH4_4g28970 FvH4_4g28970 FvH4_4g28970 FvH4_4g28970 FvH4_4g28970 |
| malus_domestica | MD13G1055100.v1.1 MD16G1054000.v1.1 |
| prunus_persica | Prupe.1G295700_v2.0.a1 Prupe.1G295700_v2.0.a1 |
| pyrus_communis | pycom13g04880 pycom16g04700 |
| rosa_chinensis | RchiOBHm_Chr4g0437111 |
| rosa_laevigata | RLG00000006467 |
| rosa_multiflora | Rmu_co8109606.1_g000001 Rmu_ssc0000006.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00378180 |
| rosa_rugosa | Rorug04G0298100 |
| rosa_samantha | Rh4AG352900 Rh4BG362400 Rh4CG376600 Rh4DG356400 |
| rosa_wichuraiana | Rw4G030900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1843 |
| Acc16I | TGCGCA | 1 cut(s) | 1975 |
| Acc36I | ACCTGC | 1 cut(s) | 1132 |
| Acc65I | GGTACC | 1 cut(s) | 2267 |
| AccB1I | GGYRCC | 3 cut(s) | 523, 1312, 2267 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2035 |
| AccI | GTMKAC | 1 cut(s) | 1956 |
| AccII | CGCG | 3 cut(s) | 138, 2235, 2285 |
| AciI | CCGC | 7 cut(s) | 473, 591, 665, 1151, 1739, 2015, 2298 |
| AclWI | GGATC | 3 cut(s) | 2015, 2495, 2508 |
| AcoI | YGGCCR | 1 cut(s) | 214 |
| AcsI | RAATTY | 4 cut(s) | 209, 529, 1888, 1962 |
| AcuI | CTGAAG | 6 cut(s) | 336, 873, 989, 1599, 2079, 2393 |
| AcyI | GRCGYC | 3 cut(s) | 524, 1818, 1840 |
| AfaI | GTAC | 3 cut(s) | 485, 1500, 2269 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 618, 1482, 1991, 2035, 2080, 2157, 2158 |
| AflII | CTTAAG | 1 cut(s) | 1184 |
| AgsI | TTSAA | 7 cut(s) | 39, 755, 1238, 1850, 1873, 1991, 2351 |
| AjnI | CCWGG | 5 cut(s) | 177, 486, 1455, 1821, 2112 |
| Alw21I | GWGCWC | 1 cut(s) | 2233 |
| Alw26I | GTCTC | 2 cut(s) | 446, 2078 |
| Alw44I | GTGCAC | 1 cut(s) | 2229 |
| AlwI | GGATC | 3 cut(s) | 2015, 2495, 2508 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 520, 2416 |
| AoxI | GGCC | 5 cut(s) | 175, 214, 609, 1452, 1858 |
| ApaLI | GTGCAC | 1 cut(s) | 2229 |
| ApeKI | GCWGC | 7 cut(s) | 26, 379, 758, 2039, 2147, 2312, 2354 |
| ApoI | RAATTY | 4 cut(s) | 209, 529, 1888, 1962 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1949, 1981 |
| AseI | ATTAAT | 1 cut(s) | 2049 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 321, 1566 |
| Asp718I | GGTACC | 1 cut(s) | 2267 |
| AspA2I | CCTAGG | 2 cut(s) | 1424, 2335 |
| AspLEI | GCGC | 5 cut(s) | 140, 191, 526, 1404, 1976 |
| AspS9I | GGNCC | 2 cut(s) | 609, 1453 |
| AsuC2I | CCSGG | 1 cut(s) | 1166 |
| AsuHPI | GGTGA | 5 cut(s) | 785, 2070, 2102, 2194, 2393 |
| AsuII | TTCGAA | 1 cut(s) | 654 |
| AvrII | CCTAGG | 2 cut(s) | 1424, 2335 |
| BaeGI | GKGCMC | 1 cut(s) | 2233 |
| BamHI | GGATCC | 1 cut(s) | 2500 |
| BanI | GGYRCC | 3 cut(s) | 523, 1312, 2267 |
| BbsI | GAAGAC | 3 cut(s) | 150, 824, 1217 |
| Bbv12I | GWGCWC | 1 cut(s) | 2233 |
| BbvI | GCAGC | 7 cut(s) | 13, 391, 745, 2051, 2134, 2299, 2341 |
| BccI | CCATC | 9 cut(s) | 255, 670, 697, 1096, 1258, 1372, 1800, 2111, 2491 |
| BceAI | ACGGC | 2 cut(s) | 1054, 2471 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 269, 303 |
| BciT130I | CCWGG | 5 cut(s) | 179, 488, 1457, 1823, 2114 |
| BciVI | GTATCC | 1 cut(s) | 1453 |
| BclI | TGATCA | 1 cut(s) | 1132 |
| BcnI | CCSGG | 1 cut(s) | 1166 |
| BcoDI | GTCTC | 2 cut(s) | 446, 2078 |
| BfaI | CTAG | 7 cut(s) | 14, 270, 938, 1425, 1527, 2316, 2336 |
| BfmI | CTRYAG | 2 cut(s) | 142, 1698 |
| BfoI | RGCGCY | 2 cut(s) | 527, 1405 |
| BfrI | CTTAAG | 1 cut(s) | 1184 |
| BfuAI | ACCTGC | 1 cut(s) | 1132 |
| BfuI | GTATCC | 1 cut(s) | 1453 |
| BlnI | CCTAGG | 2 cut(s) | 1424, 2335 |
| Bme1390I | CCNGG | 6 cut(s) | 179, 488, 1166, 1457, 1823, 2114 |
| BmgT120I | GGNCC | 2 cut(s) | 609, 1453 |
| BmiI | GGNNCC | 5 cut(s) | 525, 1314, 1801, 2269, 2502 |
| BmrFI | CCNGG | 6 cut(s) | 179, 488, 1166, 1457, 1823, 2114 |
| BmrI | ACTGGG | 1 cut(s) | 216 |
| BmsI | GCATC | 6 cut(s) | 200, 460, 571, 1135, 2277, 2309 |
| BmuI | ACTGGG | 1 cut(s) | 216 |
| BpiI | GAAGAC | 3 cut(s) | 150, 824, 1217 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1649, 1681 |
| BpmI | CTGGAG | 3 cut(s) | 131, 356, 1844 |
| Bpu14I | TTCGAA | 1 cut(s) | 654 |
| BpuEI | CTTGAG | 3 cut(s) | 68, 78, 803 |
| BpuMI | CCSGG | 1 cut(s) | 1166 |
| BsaHI | GRCGYC | 3 cut(s) | 524, 1818, 1840 |
| BsaJI | CCNNGG | 8 cut(s) | 279, 294, 1049, 1424, 1455, 1756, 2152, 2335 |
| BsaWI | WCCGGW | 1 cut(s) | 2080 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1213, 1243, 1901, 1931 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 618, 1482, 1991, 2035, 2080, 2157, 2158 |
| Bse118I | RCCGGY | 1 cut(s) | 611 |
| Bse1I | ACTGG | 2 cut(s) | 222, 1331 |
| Bse3DI | GCAATG | 1 cut(s) | 585 |
| BseBI | CCWGG | 5 cut(s) | 179, 488, 1457, 1823, 2114 |
| BseDI | CCNNGG | 8 cut(s) | 279, 294, 1049, 1424, 1455, 1756, 2152, 2335 |
| BseGI | GGATG | 5 cut(s) | 304, 586, 1269, 1364, 2122 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 618, 1482, 1991, 2035, 2080, 2157, 2158 |
| BseMI | GCAATG | 1 cut(s) | 585 |
| BseMII | CTCAG | 2 cut(s) | 419, 956 |
| BseNI | ACTGG | 2 cut(s) | 222, 1331 |
| BseSI | GKGCMC | 1 cut(s) | 2233 |
| BseX3I | CGGCCG | 1 cut(s) | 214 |
| BseXI | GCAGC | 7 cut(s) | 13, 391, 745, 2051, 2134, 2299, 2341 |
| BseYI | CCCAGC | 1 cut(s) | 635 |
| BsgI | GTGCAG | 2 cut(s) | 1110, 1831 |
| Bsh1236I | CGCG | 3 cut(s) | 138, 2235, 2285 |
| Bsh1285I | CGRYCG | 2 cut(s) | 217, 2173 |
| BshFI | GGCC | 5 cut(s) | 177, 216, 611, 1454, 1860 |
| BshNI | GGYRCC | 3 cut(s) | 523, 1312, 2267 |
| BsiEI | CGRYCG | 2 cut(s) | 217, 2173 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2233 |
| BsiSI | CCGG | 4 cut(s) | 612, 668, 1166, 2081 |
| BslFI | GGGAC | 3 cut(s) | 181, 1851, 2174 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 618, 1482, 1991, 2035, 2080, 2157, 2158 |
| BsmAI | GTCTC | 2 cut(s) | 446, 2078 |
| BsmBI | CGTCTC | 1 cut(s) | 446 |
| BsmFI | GGGAC | 3 cut(s) | 181, 1851, 2174 |
| BsmI | GAATGC | 3 cut(s) | 423, 1169, 1244 |
| BsnI | GGCC | 5 cut(s) | 177, 216, 611, 1454, 1860 |
| Bsp119I | TTCGAA | 1 cut(s) | 654 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2233 |
| Bsp143I | GATC | 6 cut(s) | 1132, 1927, 2020, 2170, 2236, 2500 |
| Bsp19I | CCATGG | 1 cut(s) | 1049 |
| BspACI | CCGC | 7 cut(s) | 473, 591, 665, 1151, 1739, 2015, 2298 |
| BspANI | GGCC | 5 cut(s) | 177, 216, 611, 1454, 1860 |
| BspCNI | CTCAG | 2 cut(s) | 420, 957 |
| BspFNI | CGCG | 3 cut(s) | 138, 2235, 2285 |
| BspLI | GGNNCC | 5 cut(s) | 525, 1314, 1801, 2269, 2502 |
| BspMAI | CTGCAG | 1 cut(s) | 146 |
| BspMI | ACCTGC | 1 cut(s) | 1132 |
| BspPI | GGATC | 3 cut(s) | 2015, 2495, 2508 |
| BspQI | GCTCTTC | 1 cut(s) | 824 |
| BspT104I | TTCGAA | 1 cut(s) | 654 |
| BspT107I | GGYRCC | 3 cut(s) | 523, 1312, 2267 |
| BspTI | CTTAAG | 1 cut(s) | 1184 |
| BsrDI | GCAATG | 1 cut(s) | 585 |
| BsrFI | RCCGGY | 1 cut(s) | 611 |
| BsrI | ACTGG | 2 cut(s) | 222, 1331 |
| BssAI | RCCGGY | 1 cut(s) | 611 |
| BssECI | CCNNGG | 8 cut(s) | 279, 294, 1049, 1424, 1455, 1756, 2152, 2335 |
| BssMI | GATC | 6 cut(s) | 1132, 1927, 2020, 2170, 2236, 2500 |
| BssNI | GRCGYC | 3 cut(s) | 524, 1818, 1840 |
| BssT1I | CCWWGG | 3 cut(s) | 1049, 1424, 2335 |
| Bst2UI | CCWGG | 5 cut(s) | 179, 488, 1457, 1823, 2114 |
| Bst4CI | ACNGT | 4 cut(s) | 660, 725, 1559, 2194 |
| Bst6I | CTCTTC | 3 cut(s) | 312, 824, 2243 |
| BstACI | GRCGYC | 3 cut(s) | 524, 1818, 1840 |
| BstAFI | CTTAAG | 1 cut(s) | 1184 |
| BstBI | TTCGAA | 1 cut(s) | 654 |
| BstC8I | GCNNGC | 7 cut(s) | 122, 136, 142, 522, 600, 2044, 2233 |
| BstDEI | CTNAG | 2 cut(s) | 428, 965 |
| BstDSI | CCRYGG | 3 cut(s) | 294, 1049, 1756 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1989 |
| BstF5I | GGATG | 5 cut(s) | 304, 586, 1269, 1364, 2122 |
| BstFNI | CGCG | 3 cut(s) | 138, 2235, 2285 |
| BstH2I | RGCGCY | 2 cut(s) | 527, 1405 |
| BstHHI | GCGC | 5 cut(s) | 140, 191, 526, 1404, 1976 |
| BstKTI | GATC | 6 cut(s) | 1135, 1930, 2023, 2173, 2239, 2503 |
| BstMAI | GTCTC | 2 cut(s) | 446, 2078 |
| BstMBI | GATC | 6 cut(s) | 1132, 1927, 2020, 2170, 2236, 2500 |
| BstMCI | CGRYCG | 2 cut(s) | 217, 2173 |
| BstNI | CCWGG | 5 cut(s) | 179, 488, 1457, 1823, 2114 |
| BstNSI | RCATGY | 1 cut(s) | 2046 |
| BstSCI | CCNGG | 6 cut(s) | 177, 486, 1164, 1455, 1821, 2112 |
| BstSFI | CTRYAG | 2 cut(s) | 142, 1698 |
| BstSLI | GKGCMC | 1 cut(s) | 2233 |
| BstUI | CGCG | 3 cut(s) | 138, 2235, 2285 |
| BstV1I | GCAGC | 7 cut(s) | 13, 391, 745, 2051, 2134, 2299, 2341 |
| BstV2I | GAAGAC | 3 cut(s) | 150, 824, 1217 |
| BstX2I | RGATCY | 2 cut(s) | 2020, 2500 |
| BstXI | CCANNNNNNTGG | 5 cut(s) | 109, 185, 391, 606, 1326 |
| BstYI | RGATCY | 2 cut(s) | 2020, 2500 |
| BstZI | CGGCCG | 1 cut(s) | 214 |
| BsuI | GTATCC | 1 cut(s) | 1453 |
| BsuRI | GGCC | 5 cut(s) | 177, 216, 611, 1454, 1860 |
| BtgI | CCRYGG | 3 cut(s) | 294, 1049, 1756 |
| BtgZI | GCGATG | 1 cut(s) | 2300 |
| BtsCI | GGATG | 5 cut(s) | 304, 586, 1269, 1364, 2122 |
| BtsIMutI | CAGTG | 2 cut(s) | 730, 2055 |
| BveI | ACCTGC | 1 cut(s) | 1132 |
| Cac8I | GCNNGC | 7 cut(s) | 122, 136, 142, 522, 600, 2044, 2233 |
| CaiI | CAGNNNCTG | 2 cut(s) | 520, 2416 |
| CfoI | GCGC | 5 cut(s) | 140, 191, 526, 1404, 1976 |
| Cfr10I | RCCGGY | 1 cut(s) | 611 |
| Cfr13I | GGNCC | 2 cut(s) | 609, 1453 |
| CseI | GACGC | 2 cut(s) | 1807, 2291 |
| Csp6I | GTAC | 3 cut(s) | 484, 1499, 2268 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 709, 744 |
| CviQI | GTAC | 3 cut(s) | 484, 1499, 2268 |
| DdeI | CTNAG | 2 cut(s) | 428, 965 |
| DinI | GGCGCC | 1 cut(s) | 525 |
| DpnI | GATC | 6 cut(s) | 1134, 1929, 2022, 2172, 2238, 2502 |
| DpnII | GATC | 6 cut(s) | 1132, 1927, 2020, 2170, 2236, 2500 |
| EaeI | YGGCCR | 1 cut(s) | 214 |
| EagI | CGGCCG | 1 cut(s) | 214 |
| Eam1104I | CTCTTC | 3 cut(s) | 312, 824, 2243 |
| EarI | CTCTTC | 3 cut(s) | 312, 824, 2243 |
| EciI | GGCGGA | 1 cut(s) | 1140 |
| EclXI | CGGCCG | 1 cut(s) | 214 |
| Eco130I | CCWWGG | 3 cut(s) | 1049, 1424, 2335 |
| Eco52I | CGGCCG | 1 cut(s) | 214 |
| Eco57I | CTGAAG | 6 cut(s) | 336, 873, 989, 1599, 2079, 2393 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1989 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1453 |
| EcoRI | GAATTC | 1 cut(s) | 209 |
| EcoRII | CCWGG | 5 cut(s) | 177, 486, 1455, 1821, 2112 |
| EcoT14I | CCWWGG | 3 cut(s) | 1049, 1424, 2335 |
| EcoT22I | ATGCAT | 2 cut(s) | 696, 2048 |
| EgeI | GGCGCC | 1 cut(s) | 525 |
| EheI | GGCGCC | 1 cut(s) | 525 |
| ErhI | CCWWGG | 3 cut(s) | 1049, 1424, 2335 |
| Esp3I | CGTCTC | 1 cut(s) | 446 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 876, 908 |
| FaqI | GGGAC | 3 cut(s) | 181, 1851, 2174 |
| FauNDI | CATATG | 1 cut(s) | 2100 |
| FbaI | TGATCA | 1 cut(s) | 1132 |
| FblI | GTMKAC | 1 cut(s) | 1956 |
| FokI | GGATG | 5 cut(s) | 311, 593, 1276, 1351, 2129 |
| FspBI | CTAG | 7 cut(s) | 14, 270, 938, 1425, 1527, 2316, 2336 |
| FspI | TGCGCA | 1 cut(s) | 1975 |
| GlaI | GCGC | 5 cut(s) | 139, 190, 525, 1403, 1975 |
| GsaI | CCCAGC | 1 cut(s) | 639 |
| GsuI | CTGGAG | 3 cut(s) | 131, 356, 1844 |
| HaeII | RGCGCY | 2 cut(s) | 527, 1405 |
| HaeIII | GGCC | 5 cut(s) | 177, 216, 611, 1454, 1860 |
| HapII | CCGG | 4 cut(s) | 612, 668, 1166, 2081 |
| HgaI | GACGC | 2 cut(s) | 1807, 2291 |
| HhaI | GCGC | 5 cut(s) | 140, 191, 526, 1404, 1976 |
| Hin1I | GRCGYC | 3 cut(s) | 524, 1818, 1840 |
| Hin6I | GCGC | 5 cut(s) | 138, 189, 524, 1402, 1974 |
| HinP1I | GCGC | 5 cut(s) | 138, 189, 524, 1402, 1974 |
| HincII | GTYRAC | 2 cut(s) | 1555, 1909 |
| HindII | GTYRAC | 2 cut(s) | 1555, 1909 |
| HindIII | AAGCTT | 2 cut(s) | 50, 1001 |
| HinfI | GANTC | 8 cut(s) | 98, 232, 305, 322, 365, 860, 1090, 1420 |
| HpaII | CCGG | 4 cut(s) | 612, 668, 1166, 2081 |
| HphI | GGTGA | 5 cut(s) | 785, 2070, 2102, 2194, 2393 |
| Hpy166II | GTNNAC | 8 cut(s) | 1513, 1555, 1909, 1957, 2110, 2135, 2231, 2487 |
| Hpy188I | TCNGA | 7 cut(s) | 237, 316, 429, 632, 865, 1804, 2156 |
| Hpy188III | TCNNGA | 8 cut(s) | 95, 110, 326, 782, 1058, 1748, 1847, 1988 |
| Hpy8I | GTNNAC | 8 cut(s) | 1513, 1555, 1909, 1957, 2110, 2135, 2231, 2487 |
| Hpy99I | CGWCG | 1 cut(s) | 1845 |
| HpyAV | CCTTC | 8 cut(s) | 1021, 1488, 1708, 1718, 1985, 1989, 2151, 2417 |
| HpyCH4III | ACNGT | 4 cut(s) | 660, 725, 1559, 2194 |
| HpyCH4IV | ACGT | 1 cut(s) | 1840 |
| HpyF3I | CTNAG | 2 cut(s) | 428, 965 |
| HpySE526I | ACGT | 1 cut(s) | 1840 |
| Hsp92I | GRCGYC | 3 cut(s) | 524, 1818, 1840 |
| HspAI | GCGC | 5 cut(s) | 138, 189, 524, 1402, 1974 |
| KasI | GGCGCC | 1 cut(s) | 523 |
| KpnI | GGTACC | 1 cut(s) | 2271 |
| Ksp22I | TGATCA | 1 cut(s) | 1132 |
| Kzo9I | GATC | 6 cut(s) | 1132, 1927, 2020, 2170, 2236, 2500 |
| LguI | GCTCTTC | 1 cut(s) | 824 |
| LmnI | GCTCC | 9 cut(s) | 407, 490, 649, 907, 934, 1153, 1346, 1388, 2260 |
| Lsp1109I | GCAGC | 7 cut(s) | 13, 391, 745, 2051, 2134, 2299, 2341 |
| LweI | GCATC | 6 cut(s) | 200, 460, 571, 1135, 2277, 2309 |
| MaeI | CTAG | 7 cut(s) | 14, 270, 938, 1425, 1527, 2316, 2336 |
| MaeII | ACGT | 1 cut(s) | 1840 |
| MaeIII | GTNAC | 5 cut(s) | 239, 871, 976, 1639, 2215 |
| MalI | GATC | 6 cut(s) | 1134, 1929, 2022, 2172, 2238, 2502 |
| MboI | GATC | 6 cut(s) | 1132, 1927, 2020, 2170, 2236, 2500 |
| MfeI | CAATTG | 1 cut(s) | 768 |
| MflI | RGATCY | 2 cut(s) | 2020, 2500 |
| MhlI | GDGCHC | 1 cut(s) | 2233 |
| Mly113I | GGCGCC | 1 cut(s) | 524 |
| MlyI | GAGTC | 2 cut(s) | 374, 1414 |
| Mph1103I | ATGCAT | 2 cut(s) | 696, 2048 |
| MroXI | GAANNNNTTC | 2 cut(s) | 321, 1566 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2115 |
| MspCI | CTTAAG | 1 cut(s) | 1184 |
| MspI | CCGG | 4 cut(s) | 612, 668, 1166, 2081 |
| MspR9I | CCNGG | 6 cut(s) | 179, 488, 1166, 1457, 1823, 2114 |
| MunI | CAATTG | 1 cut(s) | 768 |
| Mva1269I | GAATGC | 3 cut(s) | 423, 1169, 1244 |
| MvaI | CCWGG | 5 cut(s) | 179, 488, 1457, 1823, 2114 |
| MvnI | CGCG | 3 cut(s) | 138, 2235, 2285 |
| NarI | GGCGCC | 1 cut(s) | 524 |
| NciI | CCSGG | 1 cut(s) | 1166 |
| NcoI | CCATGG | 1 cut(s) | 1049 |
| NdeI | CATATG | 1 cut(s) | 2100 |
| NdeII | GATC | 6 cut(s) | 1132, 1927, 2020, 2170, 2236, 2500 |
| NlaIV | GGNNCC | 5 cut(s) | 525, 1314, 1801, 2269, 2502 |
| NmeAIII | GCCGAG | 2 cut(s) | 304, 619 |
| NmuCI | GTSAC | 2 cut(s) | 871, 1639 |
| NsbI | TGCGCA | 1 cut(s) | 1975 |
| NsiI | ATGCAT | 2 cut(s) | 696, 2048 |
| NspI | RCATGY | 1 cut(s) | 2046 |
| NspV | TTCGAA | 1 cut(s) | 654 |
| PaeI | GCATGC | 1 cut(s) | 2046 |
| PciSI | GCTCTTC | 1 cut(s) | 824 |
| PctI | GAATGC | 3 cut(s) | 423, 1169, 1244 |
| PdmI | GAANNNNTTC | 2 cut(s) | 321, 1566 |
| PfeI | GAWTC | 6 cut(s) | 98, 232, 305, 322, 860, 1090 |
| PflFI | GACNNNGTC | 3 cut(s) | 1842, 2165, 2441 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2035 |
| PfoI | TCCNGGA | 1 cut(s) | 1821 |
| Ple19I | CGATCG | 1 cut(s) | 2173 |
| PleI | GAGTC | 2 cut(s) | 373, 1414 |
| PluTI | GGCGCC | 1 cut(s) | 527 |
| PpsI | GAGTC | 2 cut(s) | 373, 1414 |
| PshBI | ATTAAT | 1 cut(s) | 2049 |
| Psp6I | CCWGG | 5 cut(s) | 177, 486, 1455, 1821, 2112 |
| PspFI | CCCAGC | 1 cut(s) | 635 |
| PspGI | CCWGG | 5 cut(s) | 177, 486, 1455, 1821, 2112 |
| PspN4I | GGNNCC | 5 cut(s) | 525, 1314, 1801, 2269, 2502 |
| PspPI | GGNCC | 2 cut(s) | 609, 1453 |
| PstI | CTGCAG | 1 cut(s) | 146 |
| PstNI | CAGNNNCTG | 2 cut(s) | 520, 2416 |
| PsuI | RGATCY | 2 cut(s) | 2020, 2500 |
| PsyI | GACNNNGTC | 3 cut(s) | 1842, 2165, 2441 |
| PvuI | CGATCG | 1 cut(s) | 2173 |
| RsaI | GTAC | 3 cut(s) | 485, 1500, 2269 |
| RsaNI | GTAC | 3 cut(s) | 484, 1499, 2268 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2115 |
| SapI | GCTCTTC | 1 cut(s) | 824 |
| Sau3AI | GATC | 6 cut(s) | 1132, 1927, 2020, 2170, 2236, 2500 |
| Sau96I | GGNCC | 2 cut(s) | 609, 1453 |
| SchI | GAGTC | 2 cut(s) | 374, 1414 |
| ScrFI | CCNGG | 6 cut(s) | 179, 488, 1166, 1457, 1823, 2114 |
| SduI | GDGCHC | 1 cut(s) | 2233 |
| SfaNI | GCATC | 6 cut(s) | 200, 460, 571, 1135, 2277, 2309 |
| SfcI | CTRYAG | 2 cut(s) | 142, 1698 |
| SfoI | GGCGCC | 1 cut(s) | 525 |
| SfuI | TTCGAA | 1 cut(s) | 654 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2115 |
| SmlI | CTYRAG | 4 cut(s) | 83, 93, 782, 1184 |
| SmoI | CTYRAG | 4 cut(s) | 83, 93, 782, 1184 |
| SphI | GCATGC | 1 cut(s) | 2046 |
| SsiI | CCGC | 7 cut(s) | 473, 591, 665, 1151, 1739, 2015, 2298 |
| SspDI | GGCGCC | 1 cut(s) | 523 |
| SspMI | CTAG | 7 cut(s) | 14, 270, 938, 1425, 1527, 2316, 2336 |
| StyD4I | CCNGG | 6 cut(s) | 177, 486, 1164, 1455, 1821, 2112 |
| StyI | CCWWGG | 3 cut(s) | 1049, 1424, 2335 |
| TaaI | ACNGT | 4 cut(s) | 660, 725, 1559, 2194 |
| TaiI | ACGT | 1 cut(s) | 1843 |
| TaqI | TCGA | 6 cut(s) | 654, 1084, 1418, 1705, 1930, 2169 |
| TauI | GCSGC | 4 cut(s) | 476, 593, 667, 2300 |
| TfiI | GAWTC | 6 cut(s) | 98, 232, 305, 322, 860, 1090 |
| TscAI | CASTG | 2 cut(s) | 730, 2062 |
| TseFI | GTSAC | 2 cut(s) | 871, 1639 |
| TseI | GCWGC | 7 cut(s) | 26, 379, 758, 2039, 2147, 2312, 2354 |
| Tsp45I | GTSAC | 2 cut(s) | 871, 1639 |
| TspDTI | ATGAA | 3 cut(s) | 894, 1727, 2112 |
| TspGWI | ACGGA | 5 cut(s) | 57, 311, 470, 1745, 1958 |
| TspRI | CASTG | 2 cut(s) | 730, 2062 |
| Tth111I | GACNNNGTC | 3 cut(s) | 1842, 2165, 2441 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2035 |
| Vha464I | CTTAAG | 1 cut(s) | 1184 |
| VneI | GTGCAC | 1 cut(s) | 2229 |
| VspI | ATTAAT | 1 cut(s) | 2049 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1989 |
| XapI | RAATTY | 4 cut(s) | 209, 529, 1888, 1962 |
| XceI | RCATGY | 1 cut(s) | 2046 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2494 |
| XmaJI | CCTAGG | 2 cut(s) | 1424, 2335 |
| XmiI | GTMKAC | 1 cut(s) | 1956 |
| XmnI | GAANNNNTTC | 2 cut(s) | 321, 1566 |
| XspI | CTAG | 7 cut(s) | 14, 270, 938, 1425, 1527, 2316, 2336 |
| ZraI | GACGTC | 1 cut(s) | 1841 |
| Zsp2I | ATGCAT | 2 cut(s) | 696, 2048 |