Polyketide cyclase / dehydrase and lipid transport
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G02475 AT4G01883 AT4G01883 AT4G01883 |
| fragaria_vesca | FvH4_1g26710 FvH4_1g26710 FvH4_1g26710 FvH4_1g26710 FvH4_1g26710 FvH4_1g26710 FvH4_1g26710 FvH4_1g26710 FvH4_1g26710 |
| malus_domestica | MD09G1287000.v1.1 MD17G1279300.v1.1 |
| prunus_persica | Prupe.3G006200_v2.0.a1 Prupe.3G006200_v2.0.a1 Prupe.3G006200_v2.0.a1 |
| pyrus_communis | pycom09g19410 pycom17g27720 |
| rosa_chinensis | RchiOBHm_Chr3g0486891 |
| rosa_laevigata | RLG00000023048 |
| rosa_multiflora | Rmu_sc0003470.1_g000011 |
| rosa_roxburghii | Rroxscaffold_6G00395420 |
| rosa_rugosa | Rorug03G0228600 Rorug03G0228600 Rorug03G0228600 |
| rosa_samantha | Rh3AG277800 Rh3BG313600 Rh3CG311900 Rh3DG308400 |
| rosa_wichuraiana | Rw3G024670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 21 |
| AcsI | RAATTY | 1 cut(s) | 389 |
| AcyI | GRCGYC | 1 cut(s) | 563 |
| AfaI | GTAC | 2 cut(s) | 55, 72 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 202, 470 |
| AflII | CTTAAG | 1 cut(s) | 359 |
| AgsI | TTSAA | 2 cut(s) | 133, 389 |
| AjiI | CACGTC | 1 cut(s) | 602 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 484, 516, 579, 611 |
| AluBI | AGCT | 4 cut(s) | 87, 165, 371, 636 |
| AluI | AGCT | 4 cut(s) | 87, 165, 371, 636 |
| Alw26I | GTCTC | 2 cut(s) | 117, 532 |
| AoxI | GGCC | 1 cut(s) | 282 |
| ApeKI | GCWGC | 4 cut(s) | 8, 29, 63, 415 |
| ApoI | RAATTY | 1 cut(s) | 389 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 88, 459 |
| AspLEI | GCGC | 1 cut(s) | 476 |
| AspS9I | GGNCC | 1 cut(s) | 497 |
| AvaII | GGWCC | 1 cut(s) | 497 |
| BbsI | GAAGAC | 3 cut(s) | 163, 336, 452 |
| BbvI | GCAGC | 3 cut(s) | 41, 75, 427 |
| BccI | CCATC | 1 cut(s) | 345 |
| BceAI | ACGGC | 1 cut(s) | 94 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 524, 558 |
| BcoDI | GTCTC | 2 cut(s) | 117, 532 |
| BfaI | CTAG | 1 cut(s) | 42 |
| BfmI | CTRYAG | 1 cut(s) | 24 |
| BfoI | RGCGCY | 1 cut(s) | 477 |
| BfrI | CTTAAG | 1 cut(s) | 359 |
| BglII | AGATCT | 1 cut(s) | 446 |
| BisI | GCNGC | 4 cut(s) | 9, 30, 64, 416 |
| BlsI | GCNGC | 4 cut(s) | 10, 31, 65, 417 |
| Bme18I | GGWCC | 1 cut(s) | 497 |
| BmgBI | CACGTC | 1 cut(s) | 602 |
| BmgT120I | GGNCC | 1 cut(s) | 497 |
| BmiI | GGNNCC | 1 cut(s) | 555 |
| BmrI | ACTGGG | 1 cut(s) | 286 |
| BmsI | GCATC | 2 cut(s) | 132, 288 |
| BmuI | ACTGGG | 1 cut(s) | 286 |
| BpiI | GAAGAC | 3 cut(s) | 163, 336, 452 |
| BpmI | CTGGAG | 2 cut(s) | 463, 540 |
| BsaAI | YACGTR | 1 cut(s) | 70 |
| BsaHI | GRCGYC | 1 cut(s) | 563 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 202, 470 |
| Bse1I | ACTGG | 5 cut(s) | 57, 181, 292, 446, 557 |
| BseGI | GGATG | 1 cut(s) | 303 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 202, 470 |
| BseNI | ACTGG | 5 cut(s) | 57, 181, 292, 446, 557 |
| BseXI | GCAGC | 3 cut(s) | 41, 75, 427 |
| BsgI | GTGCAG | 2 cut(s) | 202, 528 |
| BshFI | GGCC | 1 cut(s) | 284 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 202, 470 |
| BsmAI | GTCTC | 2 cut(s) | 117, 532 |
| BsmBI | CGTCTC | 1 cut(s) | 117 |
| BsnI | GGCC | 1 cut(s) | 284 |
| Bsp143I | GATC | 2 cut(s) | 274, 446 |
| BspACI | CCGC | 1 cut(s) | 21 |
| BspANI | GGCC | 1 cut(s) | 284 |
| BspLI | GGNNCC | 1 cut(s) | 555 |
| BspQI | GCTCTTC | 1 cut(s) | 94 |
| BspTI | CTTAAG | 1 cut(s) | 359 |
| BsrI | ACTGG | 5 cut(s) | 57, 181, 292, 446, 557 |
| BssMI | GATC | 2 cut(s) | 274, 446 |
| BssNI | GRCGYC | 1 cut(s) | 563 |
| Bst4CI | ACNGT | 5 cut(s) | 53, 223, 316, 526, 655 |
| Bst6I | CTCTTC | 1 cut(s) | 94 |
| BstACI | GRCGYC | 1 cut(s) | 563 |
| BstAFI | CTTAAG | 1 cut(s) | 359 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 626 |
| BstBAI | YACGTR | 1 cut(s) | 70 |
| BstC8I | GCNNGC | 1 cut(s) | 402 |
| BstDEI | CTNAG | 1 cut(s) | 98 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 468 |
| BstF5I | GGATG | 1 cut(s) | 303 |
| BstH2I | RGCGCY | 1 cut(s) | 477 |
| BstHHI | GCGC | 1 cut(s) | 476 |
| BstKTI | GATC | 2 cut(s) | 277, 449 |
| BstMAI | GTCTC | 2 cut(s) | 117, 532 |
| BstMBI | GATC | 2 cut(s) | 274, 446 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 14, 29, 551, 560, 626 |
| BstSFI | CTRYAG | 1 cut(s) | 24 |
| BstV1I | GCAGC | 3 cut(s) | 41, 75, 427 |
| BstV2I | GAAGAC | 3 cut(s) | 163, 336, 452 |
| BstX2I | RGATCY | 1 cut(s) | 446 |
| BstYI | RGATCY | 1 cut(s) | 446 |
| BsuRI | GGCC | 1 cut(s) | 284 |
| BtrI | CACGTC | 1 cut(s) | 602 |
| BtsCI | GGATG | 1 cut(s) | 303 |
| BtsI | GCAGTG | 1 cut(s) | 569 |
| BtsIMutI | CAGTG | 5 cut(s) | 174, 299, 439, 564, 569 |
| Cac8I | GCNNGC | 1 cut(s) | 402 |
| CfoI | GCGC | 1 cut(s) | 476 |
| Cfr13I | GGNCC | 1 cut(s) | 497 |
| CseI | GACGC | 1 cut(s) | 552 |
| Csp6I | GTAC | 2 cut(s) | 54, 71 |
| CviAII | CATG | 3 cut(s) | 144, 396, 507 |
| CviQI | GTAC | 2 cut(s) | 54, 71 |
| DdeI | CTNAG | 1 cut(s) | 98 |
| DpnI | GATC | 2 cut(s) | 276, 448 |
| DpnII | GATC | 2 cut(s) | 274, 446 |
| Eam1104I | CTCTTC | 1 cut(s) | 94 |
| EarI | CTCTTC | 1 cut(s) | 94 |
| Eco47I | GGWCC | 1 cut(s) | 497 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 468 |
| EcoO109I | RGGNCCY | 1 cut(s) | 497 |
| EcoRI | GAATTC | 1 cut(s) | 389 |
| EcoT22I | ATGCAT | 1 cut(s) | 512 |
| Esp3I | CGTCTC | 1 cut(s) | 117 |
| FaeI | CATG | 3 cut(s) | 147, 399, 510 |
| FaiI | YATR | 9 cut(s) | 145, 203, 259, 261, 366, 397, 413, 508, 512 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 76, 108 |
| FatI | CATG | 3 cut(s) | 143, 395, 506 |
| FauNDI | CATATG | 1 cut(s) | 259 |
| Fnu4HI | GCNGC | 4 cut(s) | 9, 30, 64, 416 |
| FokI | GGATG | 1 cut(s) | 310 |
| Fsp4HI | GCNGC | 4 cut(s) | 9, 30, 64, 416 |
| FspBI | CTAG | 1 cut(s) | 42 |
| GlaI | GCGC | 1 cut(s) | 475 |
| GluI | GCNGC | 4 cut(s) | 9, 30, 64, 416 |
| GsuI | CTGGAG | 2 cut(s) | 463, 540 |
| HaeII | RGCGCY | 1 cut(s) | 477 |
| HaeIII | GGCC | 1 cut(s) | 284 |
| HgaI | GACGC | 1 cut(s) | 552 |
| HhaI | GCGC | 1 cut(s) | 476 |
| Hin1I | GRCGYC | 1 cut(s) | 563 |
| Hin1II | CATG | 3 cut(s) | 147, 399, 510 |
| Hin6I | GCGC | 1 cut(s) | 474 |
| HinP1I | GCGC | 1 cut(s) | 474 |
| HinfI | GANTC | 2 cut(s) | 180, 647 |
| Hpy166II | GTNNAC | 1 cut(s) | 593 |
| Hpy188I | TCNGA | 4 cut(s) | 185, 274, 432, 646 |
| Hpy188III | TCNNGA | 4 cut(s) | 42, 278, 348, 452 |
| Hpy8I | GTNNAC | 1 cut(s) | 593 |
| HpyAV | CCTTC | 2 cut(s) | 449, 510 |
| HpyCH4III | ACNGT | 5 cut(s) | 53, 223, 316, 526, 655 |
| HpyCH4IV | ACGT | 2 cut(s) | 69, 601 |
| HpyCH4V | TGCA | 8 cut(s) | 17, 219, 415, 510, 545, 574, 620, 629 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 14, 29, 551, 560, 626 |
| HpyF3I | CTNAG | 1 cut(s) | 98 |
| HpySE526I | ACGT | 2 cut(s) | 69, 601 |
| Hsp92I | GRCGYC | 1 cut(s) | 563 |
| Hsp92II | CATG | 3 cut(s) | 147, 399, 510 |
| HspAI | GCGC | 1 cut(s) | 474 |
| Kzo9I | GATC | 2 cut(s) | 274, 446 |
| LguI | GCTCTTC | 1 cut(s) | 94 |
| LmnI | GCTCC | 1 cut(s) | 559 |
| Lsp1109I | GCAGC | 3 cut(s) | 41, 75, 427 |
| LweI | GCATC | 2 cut(s) | 132, 288 |
| MaeI | CTAG | 1 cut(s) | 42 |
| MaeII | ACGT | 2 cut(s) | 69, 601 |
| MaeIII | GTNAC | 2 cut(s) | 266, 354 |
| MalI | GATC | 2 cut(s) | 276, 448 |
| MboI | GATC | 2 cut(s) | 274, 446 |
| MboII | GAAGA | 7 cut(s) | 81, 84, 118, 121, 163, 341, 452 |
| MflI | RGATCY | 1 cut(s) | 446 |
| MluCI | AATT | 3 cut(s) | 234, 389, 518 |
| MlyI | GAGTC | 1 cut(s) | 641 |
| MnlI | CCTC | 3 cut(s) | 198, 274, 464 |
| Mph1103I | ATGCAT | 1 cut(s) | 512 |
| MroXI | GAANNNNTTC | 2 cut(s) | 88, 459 |
| MseI | TTAA | 3 cut(s) | 360, 521, 658 |
| MspA1I | CMGCKG | 1 cut(s) | 23 |
| MspCI | CTTAAG | 1 cut(s) | 359 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 14, 29, 551, 560, 626 |
| NdeI | CATATG | 1 cut(s) | 259 |
| NdeII | GATC | 2 cut(s) | 274, 446 |
| NlaIII | CATG | 3 cut(s) | 147, 399, 510 |
| NlaIV | GGNNCC | 1 cut(s) | 555 |
| NmuCI | GTSAC | 1 cut(s) | 354 |
| NsiI | ATGCAT | 1 cut(s) | 512 |
| PciSI | GCTCTTC | 1 cut(s) | 94 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 227 |
| PdmI | GAANNNNTTC | 2 cut(s) | 88, 459 |
| PfeI | GAWTC | 1 cut(s) | 180 |
| PkrI | GCNGC | 4 cut(s) | 10, 31, 65, 417 |
| PleI | GAGTC | 1 cut(s) | 641 |
| PpsI | GAGTC | 1 cut(s) | 641 |
| Ppu21I | YACGTR | 1 cut(s) | 70 |
| PpuMI | RGGWCCY | 1 cut(s) | 497 |
| Psp5II | RGGWCCY | 1 cut(s) | 497 |
| PspN4I | GGNNCC | 1 cut(s) | 555 |
| PspPI | GGNCC | 1 cut(s) | 497 |
| PspPPI | RGGWCCY | 1 cut(s) | 497 |
| PsuI | RGATCY | 1 cut(s) | 446 |
| RsaI | GTAC | 2 cut(s) | 55, 72 |
| RsaNI | GTAC | 2 cut(s) | 54, 71 |
| SapI | GCTCTTC | 1 cut(s) | 94 |
| SaqAI | TTAA | 3 cut(s) | 360, 521, 658 |
| SatI | GCNGC | 4 cut(s) | 9, 30, 64, 416 |
| Sau3AI | GATC | 2 cut(s) | 274, 446 |
| Sau96I | GGNCC | 1 cut(s) | 497 |
| SchI | GAGTC | 1 cut(s) | 641 |
| SfaNI | GCATC | 2 cut(s) | 132, 288 |
| SfcI | CTRYAG | 1 cut(s) | 24 |
| SinI | GGWCC | 1 cut(s) | 497 |
| SmlI | CTYRAG | 1 cut(s) | 359 |
| SmoI | CTYRAG | 1 cut(s) | 359 |
| Sse9I | AATT | 3 cut(s) | 234, 389, 518 |
| SsiI | CCGC | 1 cut(s) | 21 |
| SspMI | CTAG | 1 cut(s) | 42 |
| TaaI | ACNGT | 5 cut(s) | 53, 223, 316, 526, 655 |
| TaiI | ACGT | 2 cut(s) | 72, 604 |
| TaqI | TCGA | 1 cut(s) | 406 |
| TaqII | GACCGA | 1 cut(s) | 157 |
| TasI | AATT | 3 cut(s) | 234, 389, 518 |
| TfiI | GAWTC | 1 cut(s) | 180 |
| Tru1I | TTAA | 3 cut(s) | 360, 521, 658 |
| Tru9I | TTAA | 3 cut(s) | 360, 521, 658 |
| TscAI | CASTG | 5 cut(s) | 181, 299, 446, 564, 576 |
| TseFI | GTSAC | 1 cut(s) | 354 |
| TseI | GCWGC | 4 cut(s) | 8, 29, 63, 415 |
| Tsp45I | GTSAC | 1 cut(s) | 354 |
| TspRI | CASTG | 5 cut(s) | 181, 299, 446, 564, 576 |
| Vha464I | CTTAAG | 1 cut(s) | 359 |
| VpaK11BI | GGWCC | 1 cut(s) | 497 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 468 |
| XapI | RAATTY | 1 cut(s) | 389 |
| XbaI | TCTAGA | 1 cut(s) | 41 |
| XmnI | GAANNNNTTC | 2 cut(s) | 88, 459 |
| XspI | CTAG | 1 cut(s) | 42 |
| Zsp2I | ATGCAT | 1 cut(s) | 512 |