Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0002712

Physical Location & Seq

Genomic Coordinates Forward (+)

19223900 .. 19232808

Gene Structure 8909 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00397540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGTCTGAAGCATCTTCTAGATGGCATCCTTTAAAGCCAATCATAAGTTGGCTGATGGCACTCATTTTGCTCAAAATCAGTTTTGCATCTACAGAGCCTGATGTTGAAGGTGAAGCATTAATCGATTTGCTTAATGCACTGAATGATTCCAATGGCCGAATAACTGATTGGAATAATCATCTTGTGAGCCCATGTTTTAGCTGGTCTCATGTCACTTGTAGAAATGGAAATGTCATATCCCTGAGCCTGGCATCAAATGGATTTTCTGGAACACTTTCTCCTTCCGTTATCAAACTCAAATTTTTGTCCAGCCTGGACTTCCAGGATAATAGTCTAACGGGTCTGTTACCCGTTTATCTTGCCAACTTGACACATCTCCAGAATCTAAACCTTGCAAATAATAACTTCAGAGGTCCTATACCCAATACATGGGGTCAACTTTCCAATCTAAAGCACTTGGTTTTGAGGGGTAATGACATCTCTGGTGACATTCCGGATTCACTTTCTAATATCACAGGGTTGACTGAATTGGATCTTTCATCTAATGATTTAGCGGGAAAAATTCCAATGCAACTCTTCACGGTTCCGACTTTCAATTTTACAGGAACTCATCTTACTTGTGGTTCTAGCTTGAACCAGCCTTGTGCTTCTGGCTCTTCACTTGGTGTTTCAACCAAGAAATCAAAACTTGGAAGAGTTATAACTTTGGCAAGTTGTGGTGTGACAATACTTCTTTTTATCGGGGCTATTTTTGGATATCGTTATTATCACATGCACAGTCTGAAGCATGAGGTGTTTGTTGATGTGTTGGGTGAAGATGACCGTAAAATTTCCTTTGGTCAATTGAGAAGATTTTCTTGGCGTGAAATTCAAATTGCCACAGATAATTTCGATGAGAGTAACATAATTGGACAGGGAGGCTTTGGAAGAGTTTACAGAGGTGTTCTCTCAGACAATGTAAAAATTGCAGTGAAACGCCTTACCGACTATAACAGTCCTGGTGGAGAGGCTGCATTCCTGAGAGAAGTACAACTCATTAGTGTTGCAGTTCATAGGAATCTTTTACGGTTGATTGGCTTTTGTACAACTTCATCTGAGAGGGTCCTTGTTTATCCGTTCATGAAAAACCTGAGTGTTGCGTATCGCTTGAGAGATCTGAAACCAGGAGAGAAAGGCTTGGACTGGCCAACAAGGAAGCGCATTGCTTTTGGTGCAGCCCATGGCTTGGAGTATCTACATGAGTATTGCAATCCTAAGATTATACACCGTGACTTGAAGGCTGCAAACATTCTTCTAGATGATTATTTTGAGCCTGTTCTTGGAGATTTTGGGCTAGCACAGCTGGTCGATACAAAAGCAACTCATGTTACTACTCAAGTGCGTGGTACCATGGGTCATATTGCCCCTGAATATTTGTCCACTGGAAAATCTTCAGAAAAGACTGATGTTTTTGGATATGGTATCACACTGCTCGAACTTGTCACTGGTCAGCGTGCTATAGATTTTGCTCGGCTTGAAGAAGAGGAGGATGTTCTTCTGCTTGACCATATCAAGAAGCTGCTGAAAGAAAATAGACTTGATGACATTGTGGATGGAAATATGAAGACCTATGATGAAAAAGAAGTTGGTACTGTCATTCAGGTTGCATTGCTCTGCACCCAGAGCTCACCTGAGGACCGTCCAACAATGGCTGAAGTGGTTAGATTGCTGCAGGGAGTGGATCTAGCAGAGAGATGGGCTGAGTGGGAGCAACTTGAAGATGTAAGGAGTCGTGAATTCTCACTCCTGTCGCACCAGTTTGCATGGGCTGAGGAGACTACACATGATCAAGTAGCTATACAGTTGTCCATGGCAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

619

Amino Acids

68.92

Weight (kDa)

5.86

Isoelectric Point (pI)

30.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	36 - 73	3e-09	Leucine rich repeat N-terminal domain
LRR_14	PF23598	91 - 182	1.9e-06	Leucine-rich repeat region
LRR_8	PF13855	145 - 184	1.9e-06	Leucine rich repeat
LRR_4	PF12799	149 - 184	4.9e-06	Leucine Rich repeats (2 copies)
Pkinase	PF00069	298 - 567	2e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	301 - 569	3e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63710 AT5G63710 AT5G63710 AT5G63710
fragaria_vesca	FvH4_1g25740 FvH4_1g25740 FvH4_1g25740 FvH4_1g25740 FvH4_1g25740 FvH4_1g25740 FvH4_1g25740 FvH4_1g25740 FvH4_1g25740 FvH4_1g25740 FvH4_1g25740 FvH4_1g25740
malus_domestica	MD15G1139900.v1.1
prunus_persica	Prupe.4G284100_v2.0.a1 Prupe.4G284400_v2.0.a1 Prupe.4G284400_v2.0.a1 Prupe.4G285600_v2.0.a1 Prupe.4G285600_v2.0.a1 Prupe.4G285600_v2.0.a1
pyrus_communis	pycom15g12640
rosa_chinensis	RchiOBHm_Chr3g0484651
rosa_laevigata	RLG00000023209
rosa_multiflora	Rmu_sc0005467.1_g000001 Rmu_sc0006192.1_g000001
rosa_roxburghii	Rroxscaffold_6G00397540
rosa_rugosa	Rorug03G0212900 Rorug03G0213000 Rorug03G0213100 Rorug03G0213200
rosa_samantha	Rh3AG263000 Rh3AG263200 Rh3BG298600 Rh3CG295700 Rh3CG295900 Rh3DG291900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	701
Acc65I	GGTACC	1 cut(s)	1385
AccB1I	GGYRCC	1 cut(s)	1385
AccB7I	CCANNNNNTGG	2 cut(s)	429, 1225
AccIII	TCCGGA	1 cut(s)	493
AciI	CCGC	1 cut(s)	554
AclWI	GGATC	2 cut(s)	540, 1728
AcoI	YGGCCR	2 cut(s)	154, 1184
AcsI	RAATTY	5 cut(s)	299, 561, 828, 867, 1775
AcuI	CTGAAG	5 cut(s)	27, 391, 803, 1416, 1713
AdeI	CACNNNGTG	1 cut(s)	665
AfaI	GTAC	4 cut(s)	1029, 1084, 1387, 1630
AfiI	CCNNNNNNNGG	4 cut(s)	247, 429, 1225, 1319
AgsI	TTSAA	8 cut(s)	107, 595, 634, 672, 872, 1276, 1517, 1757
AjnI	CCWGG	5 cut(s)	246, 312, 321, 997, 1162
AjuI	GAANNNNNNNTTGG	6 cut(s)	151, 183, 841, 873, 1608, 1640
AloI	GAACNNNNNNTCC	2 cut(s)	262, 294
AluBI	AGCT	6 cut(s)	201, 630, 1342, 1558, 1665, 1835
AluI	AGCT	6 cut(s)	201, 630, 1342, 1558, 1665, 1835
Alw21I	GWGCWC	1 cut(s)	1667
Alw26I	GTCTC	2 cut(s)	210, 1808
AlwI	GGATC	2 cut(s)	540, 1728
AlwNI	CAGNNNCTG	1 cut(s)	98
Aor13HI	TCCGGA	1 cut(s)	493
AoxI	GGCC	2 cut(s)	154, 1184
ApeKI	GCWGC	5 cut(s)	1010, 1214, 1280, 1558, 1708
ApoI	RAATTY	5 cut(s)	299, 561, 828, 867, 1775
AseI	ATTAAT	1 cut(s)	119
Asp700I	GAANNNNTTC	3 cut(s)	274, 853, 1429
Asp718I	GGTACC	1 cut(s)	1385
AspLEI	GCGC	1 cut(s)	1200
AspS9I	GGNCC	3 cut(s)	413, 1102, 1675
AsuHPI	GGTGA	4 cut(s)	122, 497, 824, 1659
AsuNHI	GCTAGC	1 cut(s)	1333
AvaII	GGWCC	3 cut(s)	413, 1102, 1675
AxyI	CCTNAGG	1 cut(s)	1671
BalI	TGGCCA	1 cut(s)	1186
BanI	GGYRCC	1 cut(s)	1385
BanII	GRGCYC	2 cut(s)	191, 1667
BbsI	GAAGAC	1 cut(s)	1610
Bbv12I	GWGCWC	1 cut(s)	1667
BbvCI	CCTCAGC	1 cut(s)	1809
BbvI	GCAGC	5 cut(s)	997, 1226, 1267, 1545, 1695
BccI	CCATC	4 cut(s)	15, 49, 1586, 1728
BciT130I	CCWGG	5 cut(s)	248, 314, 323, 999, 1164
BclI	TGATCA	1 cut(s)	1825
BcoDI	GTCTC	2 cut(s)	210, 1808
BfaI	CTAG	5 cut(s)	18, 627, 1295, 1334, 1724
BfmI	CTRYAG	3 cut(s)	90, 1497, 1709
BglII	AGATCT	1 cut(s)	1153
BisI	GCNGC	5 cut(s)	1011, 1215, 1281, 1559, 1709
BlsI	GCNGC	5 cut(s)	1012, 1216, 1282, 1560, 1710
Bme1390I	CCNGG	5 cut(s)	248, 314, 323, 999, 1164
Bme18I	GGWCC	3 cut(s)	413, 1102, 1675
BmgT120I	GGNCC	3 cut(s)	413, 1102, 1675
BmiI	GGNNCC	3 cut(s)	585, 1103, 1387
BmrFI	CCNGG	5 cut(s)	248, 314, 323, 999, 1164
BmsI	GCATC	4 cut(s)	20, 34, 95, 260
BmtI	GCTAGC	1 cut(s)	1337
BpiI	GAAGAC	1 cut(s)	1610
BplI	GAGNNNNNCTC	2 cut(s)	930, 962
BpmI	CTGGAG	1 cut(s)	362
Bpu10I	CCTNAGC	2 cut(s)	242, 1809
BpuEI	CTTGAG	2 cut(s)	1168, 1359
Bsa29I	ATCGAT	1 cut(s)	123
BsaI	GGTCTC	1 cut(s)	210
BsaJI	CCNNGG	3 cut(s)	1219, 1389, 1848
BsaWI	WCCGGW	1 cut(s)	493
BsaXI	ACNNNNNCTCC	2 cut(s)	262, 292
Bsc4I	CCNNNNNNNGG	4 cut(s)	247, 429, 1225, 1319
Bse1I	ACTGG	4 cut(s)	1187, 1426, 1489, 1795
Bse21I	CCTNAGG	1 cut(s)	1671
Bse3DI	GCAATG	2 cut(s)	1200, 1646
BseAI	TCCGGA	1 cut(s)	493
BseBI	CCWGG	5 cut(s)	248, 314, 323, 999, 1164
BseCI	ATCGAT	1 cut(s)	123
BseDI	CCNNGG	3 cut(s)	1219, 1389, 1848
BseGI	GGATG	3 cut(s)	25, 1534, 1597
BseLI	CCNNNNNNNGG	4 cut(s)	247, 429, 1225, 1319
BseMI	GCAATG	2 cut(s)	1200, 1646
BseMII	CTCAG	8 cut(s)	233, 963, 1010, 1086, 1121, 1662, 1731, 1800
BseNI	ACTGG	4 cut(s)	1187, 1426, 1489, 1795
BseRI	GAGGAG	2 cut(s)	1538, 1826
BseXI	GCAGC	5 cut(s)	997, 1226, 1267, 1545, 1695
BsgI	GTGCAG	2 cut(s)	1233, 1639
BshFI	GGCC	2 cut(s)	156, 1186
BshNI	GGYRCC	1 cut(s)	1385
BshVI	ATCGAT	1 cut(s)	123
BsiHKAI	GWGCWC	1 cut(s)	1667
BsiSI	CCGG	1 cut(s)	494
BslI	CCNNNNNNNGG	4 cut(s)	247, 429, 1225, 1319
BsmAI	GTCTC	2 cut(s)	210, 1808
BsmI	GAATGC	1 cut(s)	1013
BsnI	GGCC	2 cut(s)	156, 1186
Bso31I	GGTCTC	1 cut(s)	210
Bsp1286I	GDGCHC	2 cut(s)	191, 1667
Bsp13I	TCCGGA	1 cut(s)	493
Bsp1407I	TGTACA	1 cut(s)	1082
Bsp143I	GATC	4 cut(s)	532, 1153, 1720, 1825
Bsp19I	CCATGG	3 cut(s)	1219, 1389, 1848
BspACI	CCGC	1 cut(s)	554
BspANI	GGCC	2 cut(s)	156, 1186
BspCNI	CTCAG	8 cut(s)	234, 962, 1011, 1087, 1122, 1663, 1732, 1801
BspDI	ATCGAT	1 cut(s)	123
BspEI	TCCGGA	1 cut(s)	493
BspHI	TCATGA	1 cut(s)	1119
BspLI	GGNNCC	3 cut(s)	585, 1103, 1387
BspMAI	CTGCAG	1 cut(s)	1713
BspOI	GCTAGC	1 cut(s)	1337
BspPI	GGATC	2 cut(s)	540, 1728
BspQI	GCTCTTC	1 cut(s)	661
BspT107I	GGYRCC	1 cut(s)	1385
BspTNI	GGTCTC	1 cut(s)	210
BsrDI	GCAATG	2 cut(s)	1200, 1646
BsrGI	TGTACA	1 cut(s)	1082
BsrI	ACTGG	4 cut(s)	1187, 1426, 1489, 1795
BssECI	CCNNGG	3 cut(s)	1219, 1389, 1848
BssMI	GATC	4 cut(s)	532, 1153, 1720, 1825
BssT1I	CCWWGG	3 cut(s)	1219, 1389, 1848
Bst2UI	CCWGG	5 cut(s)	248, 314, 323, 999, 1164
Bst4CI	ACNGT	9 cut(s)	583, 779, 824, 995, 1068, 1268, 1633, 1679, 1842
Bst6I	CTCTTC	5 cut(s)	581, 661, 688, 922, 1515
BstAUI	TGTACA	1 cut(s)	1082
BstC8I	GCNNGC	2 cut(s)	1335, 1494
BstDEI	CTNAG	9 cut(s)	242, 949, 1019, 1095, 1130, 1254, 1671, 1740, 1809
BstDSI	CCRYGG	3 cut(s)	1219, 1389, 1848
BstF5I	GGATG	3 cut(s)	25, 1534, 1597
BstHHI	GCGC	1 cut(s)	1200
BstKTI	GATC	4 cut(s)	535, 1156, 1723, 1828
BstMAI	GTCTC	2 cut(s)	210, 1808
BstMBI	GATC	4 cut(s)	532, 1153, 1720, 1825
BstMWI	GCNNNNNNNGC	3 cut(s)	1211, 1339, 1662
BstNI	CCWGG	5 cut(s)	248, 314, 323, 999, 1164
BstNSI	RCATGY	1 cut(s)	775
BstSCI	CCNGG	5 cut(s)	246, 312, 321, 997, 1162
BstSFI	CTRYAG	3 cut(s)	90, 1497, 1709
BstV1I	GCAGC	5 cut(s)	997, 1226, 1267, 1545, 1695
BstV2I	GAAGAC	1 cut(s)	1610
BstX2I	RGATCY	3 cut(s)	532, 1153, 1720
BstYI	RGATCY	3 cut(s)	532, 1153, 1720
Bsu15I	ATCGAT	1 cut(s)	123
Bsu36I	CCTNAGG	1 cut(s)	1671
BsuRI	GGCC	2 cut(s)	156, 1186
BsuTUI	ATCGAT	1 cut(s)	123
BtgI	CCRYGG	3 cut(s)	1219, 1389, 1848
BtsCI	GGATG	3 cut(s)	25, 1534, 1597
BtsI	GCAGTG	2 cut(s)	975, 1466
BtsIMutI	CAGTG	5 cut(s)	137, 975, 1419, 1466, 1482
Cac8I	GCNNGC	2 cut(s)	1335, 1494
CaiI	CAGNNNCTG	1 cut(s)	98
CciI	TCATGA	1 cut(s)	1119
CfoI	GCGC	1 cut(s)	1200
Cfr13I	GGNCC	3 cut(s)	413, 1102, 1675
ClaI	ATCGAT	1 cut(s)	123
Csp6I	GTAC	4 cut(s)	1028, 1083, 1386, 1629
CviQI	GTAC	4 cut(s)	1028, 1083, 1386, 1629
DdeI	CTNAG	9 cut(s)	242, 949, 1019, 1095, 1130, 1254, 1671, 1740, 1809
DpnI	GATC	4 cut(s)	534, 1155, 1722, 1827
DpnII	GATC	4 cut(s)	532, 1153, 1720, 1825
DraI	TTTAAA	1 cut(s)	33
DraIII	CACNNNGTG	1 cut(s)	665
EaeI	YGGCCR	2 cut(s)	154, 1184
Eam1104I	CTCTTC	5 cut(s)	581, 661, 688, 922, 1515
EarI	CTCTTC	5 cut(s)	581, 661, 688, 922, 1515
Ecl136II	GAGCTC	1 cut(s)	1665
Eco130I	CCWWGG	3 cut(s)	1219, 1389, 1848
Eco24I	GRGCYC	2 cut(s)	191, 1667
Eco31I	GGTCTC	1 cut(s)	210
Eco32I	GATATC	1 cut(s)	758
Eco47I	GGWCC	3 cut(s)	413, 1102, 1675
Eco53kI	GAGCTC	1 cut(s)	1665
Eco57I	CTGAAG	5 cut(s)	27, 391, 803, 1416, 1713
Eco81I	CCTNAGG	1 cut(s)	1671
EcoICRI	GAGCTC	1 cut(s)	1665
EcoO109I	RGGNCCY	2 cut(s)	413, 1102
EcoRI	GAATTC	1 cut(s)	1775
EcoRII	CCWGG	5 cut(s)	246, 312, 321, 997, 1162
EcoRV	GATATC	1 cut(s)	758
EcoT14I	CCWWGG	3 cut(s)	1219, 1389, 1848
EcoT38I	GRGCYC	2 cut(s)	191, 1667
ErhI	CCWWGG	3 cut(s)	1219, 1389, 1848
FalI	AAGNNNNNCTT	2 cut(s)	841, 873
FauI	CCCGC	1 cut(s)	547
FbaI	TGATCA	1 cut(s)	1825
Fnu4HI	GCNGC	5 cut(s)	1011, 1215, 1281, 1559, 1709
FokI	GGATG	3 cut(s)	12, 1541, 1604
FriOI	GRGCYC	2 cut(s)	191, 1667
Fsp4HI	GCNGC	5 cut(s)	1011, 1215, 1281, 1559, 1709
FspBI	CTAG	5 cut(s)	18, 627, 1295, 1334, 1724
GlaI	GCGC	1 cut(s)	1199
GluI	GCNGC	5 cut(s)	1011, 1215, 1281, 1559, 1709
GsuI	CTGGAG	1 cut(s)	362
HaeIII	GGCC	2 cut(s)	156, 1186
HapII	CCGG	1 cut(s)	494
HhaI	GCGC	1 cut(s)	1200
Hin6I	GCGC	1 cut(s)	1198
HinP1I	GCGC	1 cut(s)	1198
HincII	GTYRAC	2 cut(s)	437, 522
HindII	GTYRAC	2 cut(s)	437, 522
HinfI	GANTC	5 cut(s)	146, 382, 497, 1057, 1768
HpaII	CCGG	1 cut(s)	494
HphI	GGTGA	4 cut(s)	122, 497, 824, 1659
Hpy166II	GTNNAC	4 cut(s)	437, 522, 934, 1419
Hpy188I	TCNGA	8 cut(s)	7, 410, 588, 783, 952, 1096, 1158, 1435
Hpy188III	TCNNGA	9 cut(s)	18, 267, 379, 494, 1018, 1120, 1295, 1552, 1772
Hpy8I	GTNNAC	4 cut(s)	437, 522, 934, 1419
HpyAV	CCTTC	3 cut(s)	101, 291, 1270
HpyCH4III	ACNGT	9 cut(s)	583, 779, 824, 995, 1068, 1268, 1633, 1679, 1842
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1211, 1339, 1662
HpyF3I	CTNAG	9 cut(s)	242, 949, 1019, 1095, 1130, 1254, 1671, 1740, 1809
HspAI	GCGC	1 cut(s)	1198
Kpn2I	TCCGGA	1 cut(s)	493
KpnI	GGTACC	1 cut(s)	1389
Ksp22I	TGATCA	1 cut(s)	1825
Kzo9I	GATC	4 cut(s)	532, 1153, 1720, 1825
LguI	GCTCTTC	1 cut(s)	661
LmnI	GCTCC	1 cut(s)	1747
Lsp1109I	GCAGC	5 cut(s)	997, 1226, 1267, 1545, 1695
LweI	GCATC	4 cut(s)	20, 34, 95, 260
MaeI	CTAG	5 cut(s)	18, 627, 1295, 1334, 1724
MaeIII	GTNAC	8 cut(s)	211, 345, 485, 721, 899, 1268, 1366, 1480
MalI	GATC	4 cut(s)	534, 1155, 1722, 1827
MboI	GATC	4 cut(s)	532, 1153, 1720, 1825
MfeI	CAATTG	1 cut(s)	842
MflI	RGATCY	3 cut(s)	532, 1153, 1720
MhlI	GDGCHC	2 cut(s)	191, 1667
MlsI	TGGCCA	1 cut(s)	1186
MluNI	TGGCCA	1 cut(s)	1186
MlyI	GAGTC	1 cut(s)	1777
MmeI	TCCRAC	2 cut(s)	611, 1706
Mox20I	TGGCCA	1 cut(s)	1186
MroI	TCCGGA	1 cut(s)	493
MroXI	GAANNNNTTC	3 cut(s)	274, 853, 1429
MscI	TGGCCA	1 cut(s)	1186
MseI	TTAA	3 cut(s)	32, 119, 132
Msp20I	TGGCCA	1 cut(s)	1186
MspA1I	CMGCKG	1 cut(s)	1342
MspI	CCGG	1 cut(s)	494
MspR9I	CCNGG	5 cut(s)	248, 314, 323, 999, 1164
MunI	CAATTG	1 cut(s)	842
Mva1269I	GAATGC	1 cut(s)	1013
MvaI	CCWGG	5 cut(s)	248, 314, 323, 999, 1164
MwoI	GCNNNNNNNGC	3 cut(s)	1211, 1339, 1662
NcoI	CCATGG	3 cut(s)	1219, 1389, 1848
NdeII	GATC	4 cut(s)	532, 1153, 1720, 1825
NheI	GCTAGC	1 cut(s)	1333
NlaIV	GGNNCC	3 cut(s)	585, 1103, 1387
NmeAIII	GCCGAG	1 cut(s)	1489
NmuCI	GTSAC	5 cut(s)	211, 485, 721, 1268, 1480
NspI	RCATGY	1 cut(s)	775
PagI	TCATGA	1 cut(s)	1119
PciSI	GCTCTTC	1 cut(s)	661
PctI	GAATGC	1 cut(s)	1013
PdmI	GAANNNNTTC	3 cut(s)	274, 853, 1429
PfeI	GAWTC	4 cut(s)	146, 382, 497, 1057
PflMI	CCANNNNNTGG	2 cut(s)	429, 1225
PfoI	TCCNGGA	1 cut(s)	321
PkrI	GCNGC	5 cut(s)	1012, 1216, 1282, 1560, 1710
PleI	GAGTC	1 cut(s)	1776
PpsI	GAGTC	1 cut(s)	1776
PpuMI	RGGWCCY	2 cut(s)	413, 1102
PshBI	ATTAAT	1 cut(s)	119
PsiI	TTATAA	1 cut(s)	701
Psp124BI	GAGCTC	1 cut(s)	1667
Psp5II	RGGWCCY	2 cut(s)	413, 1102
Psp6I	CCWGG	5 cut(s)	246, 312, 321, 997, 1162
PspGI	CCWGG	5 cut(s)	246, 312, 321, 997, 1162
PspN4I	GGNNCC	3 cut(s)	585, 1103, 1387
PspPI	GGNCC	3 cut(s)	413, 1102, 1675
PspPPI	RGGWCCY	2 cut(s)	413, 1102
PsrI	GAACNNNNNNTAC	2 cut(s)	598, 630
PstI	CTGCAG	1 cut(s)	1713
PstNI	CAGNNNCTG	1 cut(s)	98
PsuI	RGATCY	3 cut(s)	532, 1153, 1720
PvuII	CAGCTG	1 cut(s)	1342
RsaI	GTAC	4 cut(s)	1029, 1084, 1387, 1630
RsaNI	GTAC	4 cut(s)	1028, 1083, 1386, 1629
SacI	GAGCTC	1 cut(s)	1667
SapI	GCTCTTC	1 cut(s)	661
SaqAI	TTAA	3 cut(s)	32, 119, 132
SatI	GCNGC	5 cut(s)	1011, 1215, 1281, 1559, 1709
Sau3AI	GATC	4 cut(s)	532, 1153, 1720, 1825
Sau96I	GGNCC	3 cut(s)	413, 1102, 1675
SchI	GAGTC	1 cut(s)	1777
ScrFI	CCNGG	5 cut(s)	248, 314, 323, 999, 1164
SduI	GDGCHC	2 cut(s)	191, 1667
SfaNI	GCATC	4 cut(s)	20, 34, 95, 260
SfcI	CTRYAG	3 cut(s)	90, 1497, 1709
SinI	GGWCC	3 cut(s)	413, 1102, 1675
SmlI	CTYRAG	2 cut(s)	1147, 1374
SmoI	CTYRAG	2 cut(s)	1147, 1374
SsiI	CCGC	1 cut(s)	554
SspI	AATATT	1 cut(s)	1412
SspMI	CTAG	5 cut(s)	18, 627, 1295, 1334, 1724
SstI	GAGCTC	1 cut(s)	1667
StyD4I	CCNGG	5 cut(s)	246, 312, 321, 997, 1162
StyI	CCWWGG	3 cut(s)	1219, 1389, 1848
TaaI	ACNGT	9 cut(s)	583, 779, 824, 995, 1068, 1268, 1633, 1679, 1842
TaqI	TCGA	4 cut(s)	123, 891, 1347, 1473
TatI	WGTACW	2 cut(s)	1027, 1082
TfiI	GAWTC	4 cut(s)	146, 382, 497, 1057
Tru1I	TTAA	3 cut(s)	32, 119, 132
Tru9I	TTAA	3 cut(s)	32, 119, 132
TscAI	CASTG	5 cut(s)	144, 975, 1426, 1473, 1489
TseFI	GTSAC	5 cut(s)	211, 485, 721, 1268, 1480
TseI	GCWGC	5 cut(s)	1010, 1214, 1280, 1558, 1708
Tsp45I	GTSAC	5 cut(s)	211, 485, 721, 1268, 1480
TspDTI	ATGAA	7 cut(s)	528, 1040, 1080, 1108, 1136, 1616, 1629
TspGWI	ACGGA	2 cut(s)	274, 1104
TspRI	CASTG	5 cut(s)	144, 975, 1426, 1473, 1489
Van91I	CCANNNNNTGG	2 cut(s)	429, 1225
VpaK11BI	GGWCC	3 cut(s)	413, 1102, 1675
VspI	ATTAAT	1 cut(s)	119
XapI	RAATTY	5 cut(s)	299, 561, 828, 867, 1775
XbaI	TCTAGA	2 cut(s)	17, 1294
XceI	RCATGY	1 cut(s)	775
XcmI	CCANNNNNNNNNTGG	2 cut(s)	45, 198
XmnI	GAANNNNTTC	3 cut(s)	274, 853, 1429
XspI	CTAG	5 cut(s)	18, 627, 1295, 1334, 1724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.