No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000017683 |
| rosa_multiflora | Rmu_sc0000965.1_g000004 Rmu_sc0003887.1_g000007 Rmu_sc0003887.1_g000008 Rmu_sc0005246.1_g000004 Rmu_sc0006007.1_g000004 Rmu_sc0006126.1_g000007 Rmu_sc0023546.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00021520 Rroxscaffold_1G00045370 Rroxscaffold_3G00229580 Rroxscaffold_6G00412900 Rroxscaffold_6G00417010 |
| rosa_rugosa | Rorug02G0373300 |
| rosa_samantha | Rh5DG503600 Rh6AG135700 Rh6DG492500 Rh7DG482400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 75, 170 |
| AciI | CCGC | 4 cut(s) | 73, 89, 174, 190 |
| AcyI | GRCGYC | 1 cut(s) | 76 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 106, 268 |
| AgsI | TTSAA | 1 cut(s) | 55 |
| Alw26I | GTCTC | 1 cut(s) | 194 |
| AoxI | GGCC | 1 cut(s) | 249 |
| ApeKI | GCWGC | 1 cut(s) | 223 |
| AspLEI | GCGC | 2 cut(s) | 78, 209 |
| BamHI | GGATCC | 3 cut(s) | 91, 137, 258 |
| BanI | GGYRCC | 2 cut(s) | 75, 170 |
| BauI | CACGAG | 1 cut(s) | 27 |
| BbvI | GCAGC | 1 cut(s) | 210 |
| BccI | CCATC | 1 cut(s) | 53 |
| BceAI | ACGGC | 2 cut(s) | 63, 161 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 115, 149 |
| BcoDI | GTCTC | 1 cut(s) | 194 |
| BfaI | CTAG | 1 cut(s) | 263 |
| BfoI | RGCGCY | 2 cut(s) | 79, 210 |
| BisI | GCNGC | 3 cut(s) | 74, 174, 224 |
| BlsI | GCNGC | 3 cut(s) | 75, 175, 225 |
| BmiI | GGNNCC | 5 cut(s) | 77, 93, 139, 172, 260 |
| BmsI | GCATC | 1 cut(s) | 225 |
| BsaHI | GRCGYC | 1 cut(s) | 76 |
| BsaJI | CCNNGG | 1 cut(s) | 211 |
| BsaWI | WCCGGW | 1 cut(s) | 268 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 106, 268 |
| BseDI | CCNNGG | 1 cut(s) | 211 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 106, 268 |
| BseXI | GCAGC | 1 cut(s) | 210 |
| BshFI | GGCC | 1 cut(s) | 251 |
| BshNI | GGYRCC | 2 cut(s) | 75, 170 |
| BsiSI | CCGG | 1 cut(s) | 269 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 106, 268 |
| BsmAI | GTCTC | 1 cut(s) | 194 |
| BsmBI | CGTCTC | 1 cut(s) | 194 |
| BsnI | GGCC | 1 cut(s) | 251 |
| BspACI | CCGC | 4 cut(s) | 73, 89, 174, 190 |
| BspANI | GGCC | 1 cut(s) | 251 |
| BspLI | GGNNCC | 5 cut(s) | 77, 93, 139, 172, 260 |
| BspT107I | GGYRCC | 2 cut(s) | 75, 170 |
| BssECI | CCNNGG | 1 cut(s) | 211 |
| BssNI | GRCGYC | 1 cut(s) | 76 |
| BssSI | CACGAG | 1 cut(s) | 27 |
| Bst2BI | CACGAG | 1 cut(s) | 27 |
| BstACI | GRCGYC | 1 cut(s) | 76 |
| BstH2I | RGCGCY | 2 cut(s) | 79, 210 |
| BstHHI | GCGC | 2 cut(s) | 78, 209 |
| BstMAI | GTCTC | 1 cut(s) | 194 |
| BstV1I | GCAGC | 1 cut(s) | 210 |
| BstX2I | RGATCY | 5 cut(s) | 91, 137, 215, 258, 265 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 167 |
| BstYI | RGATCY | 5 cut(s) | 91, 137, 215, 258, 265 |
| BsuRI | GGCC | 1 cut(s) | 251 |
| CfoI | GCGC | 2 cut(s) | 78, 209 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 43, 78 |
| CviAII | CATG | 1 cut(s) | 161 |
| CviJI | RGCY | 1 cut(s) | 251 |
| CviKI_1 | RGCY | 1 cut(s) | 251 |
| DinI | GGCGCC | 1 cut(s) | 77 |
| EgeI | GGCGCC | 1 cut(s) | 77 |
| EheI | GGCGCC | 1 cut(s) | 77 |
| Esp3I | CGTCTC | 1 cut(s) | 194 |
| FaeI | CATG | 1 cut(s) | 164 |
| FaiI | YATR | 1 cut(s) | 162 |
| FatI | CATG | 1 cut(s) | 160 |
| Fnu4HI | GCNGC | 3 cut(s) | 74, 174, 224 |
| Fsp4HI | GCNGC | 3 cut(s) | 74, 174, 224 |
| FspBI | CTAG | 1 cut(s) | 263 |
| GlaI | GCGC | 2 cut(s) | 77, 208 |
| GluI | GCNGC | 3 cut(s) | 74, 174, 224 |
| HaeII | RGCGCY | 2 cut(s) | 79, 210 |
| HaeIII | GGCC | 1 cut(s) | 251 |
| HapII | CCGG | 1 cut(s) | 269 |
| HhaI | GCGC | 2 cut(s) | 78, 209 |
| Hin1I | GRCGYC | 1 cut(s) | 76 |
| Hin1II | CATG | 1 cut(s) | 164 |
| Hin6I | GCGC | 2 cut(s) | 76, 207 |
| HinP1I | GCGC | 2 cut(s) | 76, 207 |
| HpaII | CCGG | 1 cut(s) | 269 |
| Hpy188I | TCNGA | 2 cut(s) | 137, 215 |
| HpyAV | CCTTC | 2 cut(s) | 24, 190 |
| HpyCH4IV | ACGT | 1 cut(s) | 131 |
| HpyCH4V | TGCA | 1 cut(s) | 44 |
| HpySE526I | ACGT | 1 cut(s) | 131 |
| Hsp92I | GRCGYC | 1 cut(s) | 76 |
| Hsp92II | CATG | 1 cut(s) | 164 |
| HspAI | GCGC | 2 cut(s) | 76, 207 |
| KasI | GGCGCC | 1 cut(s) | 75 |
| Lsp1109I | GCAGC | 1 cut(s) | 210 |
| LweI | GCATC | 1 cut(s) | 225 |
| MaeI | CTAG | 1 cut(s) | 263 |
| MaeII | ACGT | 1 cut(s) | 131 |
| MboII | GAAGA | 1 cut(s) | 210 |
| MflI | RGATCY | 5 cut(s) | 91, 137, 215, 258, 265 |
| Mly113I | GGCGCC | 1 cut(s) | 76 |
| MmeI | TCCRAC | 1 cut(s) | 223 |
| MnlI | CCTC | 3 cut(s) | 62, 151, 221 |
| MspI | CCGG | 1 cut(s) | 269 |
| NarI | GGCGCC | 1 cut(s) | 76 |
| NlaIII | CATG | 1 cut(s) | 164 |
| NlaIV | GGNNCC | 5 cut(s) | 77, 93, 139, 172, 260 |
| PkrI | GCNGC | 3 cut(s) | 75, 175, 225 |
| PluTI | GGCGCC | 1 cut(s) | 79 |
| PspN4I | GGNNCC | 5 cut(s) | 77, 93, 139, 172, 260 |
| PsuI | RGATCY | 5 cut(s) | 91, 137, 215, 258, 265 |
| SatI | GCNGC | 3 cut(s) | 74, 174, 224 |
| SetI | ASST | 1 cut(s) | 134 |
| SfaNI | GCATC | 1 cut(s) | 225 |
| SfoI | GGCGCC | 1 cut(s) | 77 |
| SsiI | CCGC | 4 cut(s) | 73, 89, 174, 190 |
| SspDI | GGCGCC | 1 cut(s) | 75 |
| SspMI | CTAG | 1 cut(s) | 263 |
| TaiI | ACGT | 1 cut(s) | 134 |
| TaqI | TCGA | 1 cut(s) | 233 |
| TauI | GCSGC | 2 cut(s) | 76, 176 |
| TseI | GCWGC | 1 cut(s) | 223 |
| TspGWI | ACGGA | 1 cut(s) | 135 |
| XspI | CTAG | 1 cut(s) | 263 |