Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0013898

Physical Location & Seq

Genomic Coordinates Forward (+)

37369221 .. 37371897

Gene Structure 2677 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00415120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGAGGAATTTTAGTGTGGTTTCTTTTCTGCTCCTCAAATTGGCAATGTTATGGTGCATAACAGCCAGCCGTTGTCCGGATTGTGGCCGCACCACCGTGCCGTATCCACTGAGCACGGAGCCAAACTGCGGCGACCAGGCATACAAGGTTCAGTGCAATGCAGGAACACTGTGGTTCCACACCCTCAACAACTCCTATCCAGTCACATCCGTTAATCCGCTAACGCAGCGGATTGTGATCCAACCACCAGGAGTGGCAAACAAGAACACATGTATCGCTGCTGATTTCCAATCTCAGGGAATTTTGCTGGACAACAACCTTCCCTTCAACATTAGTGGCAGCAACACTGTGATAGGCATGAACTGTTCAACTGAAATGCTTACCACCTCCTTAAACTGCTCCTCCAATAGCATATGCCACGACTACGTTAGGCACAATCCAATGGCAGCATCAGCTTGTGGGAACTTGTCATTATGTTGTTCATACAAAACTGGTGGATCTTCAAATGCCTACAAAATCAGGGTTAGAAAGGAACGTTGTGTTGCCTATGTGAGTTTTGTGAATTTGGACTCTACGTTGGATGTGAGCAAGTGGCCTCAGCCTGCGGTTGAGATGCAATGGGTGTTGCCGGAAGAGCCAGGATGCAAGTTACAAGTAGATTGTGGGGGTTTGGCAAACTCGGTGTGCTTGCCGGATCCGTCTAGTGCCAAAGAGAGGAAGTGCTTGTGCAAGACTGGGTTCAAATGGGACCCCATCAATGGAATATGTCAAAGCTCCGCCTTTGCTGTCGTTGCAATGCTAATTGGAGGATCCTCTGCCTTTATAATTAAGCGACGTGGTCGAAACGTTGCAAGATCAGCACAGTCTAGCTTGACAAAGTTCAGAGAAGACATACTAAATGCTAACAGTAGTACTGGCAAATCAGCCAAGAATTTCACAGGCAAAGAAATCACAAAAGCAACCAACAACTTCTCCAAAGACAACCTTCTTGGCTCTGGTGGCTTTGGCGATGTCTTCAAGGCCACACTTGACGATGGAACTGTCACAGCAGTGAAGAAAGCCAAGGCTGGAAACATAAAGGGCATCGATCAAATTCTCAACGAAGTTCGAATTCTTTGCCAAGTAAACCACAGAAGCCTAGTCAGATTAATGGGTTGTTGTCTTGAGCTTGAACAACCGCTTTTAATCTACGAGTATGTCCCAAACGGTACCCTTTTTGATCATCTACATGGAAGGTACCACAGTGCCACCAAAAGGGTGTCACTAACTTGGGCCACGAGGCTCACCATTGCTCACCAAACTGCTGAAGGACTTGCCTATCTGCACGATTCAGTCGAGCCGAGGATTTACCACCGTGACATAAAGTCGAGCAACATTTTACTCGATGAAAAGCTCAATGCTAAGGTTGCTGATTTTGGTCTGTCGAGGTTGGCCGTGACCGAATCAAGTCACATTACAACATGTGCTCAGGGAACCTTGGGGTACCTAGACCCCGACTATTACTTGAACTTTCAATTGACAGACAAGAGTGATGTCTATAGCTTTGGAGTTGTGTTGTTAGAGCTGTTGACTGGTAAGAAAGCTATTGATTTTAACAGACAAGAAGACGACGTGAACTTGGTGGTTTATGTCAAGAACATTTTAAGGGAAGAGAGACTAAATGATGCCATTGACCCCAAGCTTAAAGAGGAGGCTGGCACAATGGCTTTGGAGACTATGAAGGCATTAGGATCTCTGGCAGCTGCATGCTTGGATGAGAGGAGGCAAAATCGACCCTCCATGAAAGAAGTTGCTGATGAAATTGAGTACATTATTAGTATCGTTACAAATGAGGTTTCAGCAACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

615

Amino Acids

67.53

Weight (kDa)

8.07

Isoelectric Point (pI)

34.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	25 - 80	1.4e-07	Wall-associated receptor kinase galacturonan-binding
Pkinase	PF00069	325 - 598	1.2e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	327 - 600	9.4e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53840
malus_domestica	MD12G1149600.v1.1
prunus_persica	Prupe.6G261100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0465331 RchiOBHm_Chr3g0465341
rosa_laevigata	RLG00000024646
rosa_multiflora	Rmu_co8329097.1_g000001 Rmu_co8386781.1_g000001
rosa_roxburghii	Rroxscaffold_6G00415120
rosa_rugosa	Rorug03G0076200 Rorug03G0076300
rosa_samantha	Rh3BG141100 Rh3CG142000 Rh3CG142100 Rh3DG142100 Rh3DG142200
rosa_wichuraiana	Rw3G011540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	824
Acc65I	GGTACC	3 cut(s)	1208, 1236, 1482
AccB1I	GGYRCC	3 cut(s)	1208, 1236, 1482
AccIII	TCCGGA	1 cut(s)	76
AciI	CCGC	7 cut(s)	88, 129, 218, 229, 605, 777, 1178
AclI	AACGTT	2 cut(s)	535, 846
AclWI	GGATC	7 cut(s)	232, 505, 689, 702, 804, 817, 1738
AcoI	YGGCCR	2 cut(s)	85, 1431
AcsI	RAATTY	6 cut(s)	7, 300, 562, 931, 1092, 1110
AcuI	CTGAAG	1 cut(s)	1326
AfaI	GTAC	5 cut(s)	913, 1210, 1238, 1484, 1808
AfiI	CCNNNNNNNGG	8 cut(s)	40, 76, 83, 128, 295, 714, 758, 1254
AflIII	ACRYGT	2 cut(s)	269, 1460
AgsI	TTSAA	8 cut(s)	328, 369, 504, 742, 1018, 1172, 1507, 1514
AhdI	GACNNNNNGTC	1 cut(s)	1363
AjiI	CACGTC	2 cut(s)	836, 1612
AjnI	CCWGG	3 cut(s)	135, 247, 637
AleI	CACNNNNGTG	2 cut(s)	95, 1049
Alw21I	GWGCWC	2 cut(s)	116, 1468
Alw26I	GTCTC	2 cut(s)	1648, 1706
AlwI	GGATC	7 cut(s)	232, 505, 689, 702, 804, 817, 1738
Aor13HI	TCCGGA	1 cut(s)	76
AoxI	GGCC	5 cut(s)	85, 593, 1020, 1272, 1431
ApeKI	GCWGC	6 cut(s)	226, 278, 339, 446, 1739, 1742
ApoI	RAATTY	6 cut(s)	7, 300, 562, 931, 1092, 1110
AseI	ATTAAT	1 cut(s)	1148
Asp718I	GGTACC	3 cut(s)	1208, 1236, 1482
AspS9I	GGNCC	2 cut(s)	748, 1272
AsuHPI	GGTGA	2 cut(s)	1276, 1286
AsuII	TTCGAA	1 cut(s)	1108
AvaII	GGWCC	1 cut(s)	748
BaeI	ACNNNNGTAYC	4 cut(s)	256, 289, 1228, 1261
BamHI	GGATCC	2 cut(s)	694, 809
BanI	GGYRCC	3 cut(s)	1208, 1236, 1482
BauI	CACGAG	1 cut(s)	1276
BbsI	GAAGAC	3 cut(s)	894, 1006, 1611
Bbv12I	GWGCWC	2 cut(s)	116, 1468
BbvCI	CCTCAGC	1 cut(s)	597
BbvI	GCAGC	6 cut(s)	238, 265, 351, 458, 1729, 1751
BccI	CCATC	2 cut(s)	761, 1028
BceAI	ACGGC	3 cut(s)	54, 85, 1418
BcgI	CGANNNNNNTGC	2 cut(s)	1098, 1132
BciT130I	CCWGG	3 cut(s)	137, 249, 639
BciVI	GTATCC	1 cut(s)	114
BclI	TGATCA	1 cut(s)	1219
BcoDI	GTCTC	2 cut(s)	1648, 1706
BfaI	CTAG	4 cut(s)	702, 867, 1139, 1487
BfmI	CTRYAG	1 cut(s)	1537
BfuI	GTATCC	1 cut(s)	114
BisI	GCNGC	8 cut(s)	88, 130, 227, 279, 340, 447, 1740, 1743
BlsI	GCNGC	8 cut(s)	89, 131, 228, 280, 341, 448, 1741, 1744
BmcAI	AGTACT	1 cut(s)	913
Bme1390I	CCNGG	3 cut(s)	137, 249, 639
Bme18I	GGWCC	1 cut(s)	748
BmeRI	GACNNNNNGTC	1 cut(s)	1363
BmgBI	CACGTC	2 cut(s)	836, 1612
BmgT120I	GGNCC	2 cut(s)	748, 1272
BmrFI	CCNGG	3 cut(s)	137, 249, 639
BmrI	ACTGGG	1 cut(s)	744
BmsI	GCATC	5 cut(s)	458, 603, 632, 1092, 1654
BmuI	ACTGGG	1 cut(s)	744
BpiI	GAAGAC	3 cut(s)	894, 1006, 1611
Bpu10I	CCTNAGC	3 cut(s)	597, 1401, 1467
Bpu14I	TTCGAA	1 cut(s)	1108
BpuEI	CTTGAG	1 cut(s)	1184
Bsa29I	ATCGAT	1 cut(s)	1086
BsaBI	GATNNNNATC	1 cut(s)	236
BsaJI	CCNNGG	3 cut(s)	1062, 1340, 1476
BsaWI	WCCGGW	1 cut(s)	76
BsaXI	ACNNNNNCTCC	4 cut(s)	386, 416, 956, 986
Bsc4I	CCNNNNNNNGG	8 cut(s)	40, 76, 83, 128, 295, 714, 758, 1254
Bse1I	ACTGG	5 cut(s)	200, 496, 739, 919, 1576
Bse3DI	GCAATG	5 cut(s)	51, 163, 623, 801, 1287
Bse8I	GATNNNNATC	1 cut(s)	236
BseAI	TCCGGA	1 cut(s)	76
BseBI	CCWGG	3 cut(s)	137, 249, 639
BseCI	ATCGAT	1 cut(s)	1086
BseDI	CCNNGG	3 cut(s)	1062, 1340, 1476
BseGI	GGATG	4 cut(s)	206, 586, 647, 1759
BseJI	GATNNNNATC	1 cut(s)	236
BseLI	CCNNNNNNNGG	8 cut(s)	40, 76, 83, 128, 295, 714, 758, 1254
BseMI	GCAATG	5 cut(s)	51, 163, 623, 801, 1287
BseMII	CTCAG	4 cut(s)	101, 308, 611, 1481
BseNI	ACTGG	5 cut(s)	200, 496, 739, 919, 1576
BseRI	GAGGAG	4 cut(s)	23, 391, 1703, 1774
BseXI	GCAGC	6 cut(s)	238, 265, 351, 458, 1729, 1751
BsgI	GTGCAG	1 cut(s)	1307
BshFI	GGCC	5 cut(s)	87, 595, 1022, 1274, 1433
BshNI	GGYRCC	3 cut(s)	1208, 1236, 1482
BshVI	ATCGAT	1 cut(s)	1086
BsiHKAI	GWGCWC	2 cut(s)	116, 1468
BsiSI	CCGG	3 cut(s)	77, 629, 692
BslFI	GGGAC	2 cut(s)	761, 1184
BslI	CCNNNNNNNGG	8 cut(s)	40, 76, 83, 128, 295, 714, 758, 1254
BsmAI	GTCTC	2 cut(s)	1648, 1706
BsmFI	GGGAC	2 cut(s)	761, 1184
BsnI	GGCC	5 cut(s)	87, 595, 1022, 1274, 1433
Bsp119I	TTCGAA	1 cut(s)	1108
Bsp1286I	GDGCHC	2 cut(s)	116, 1468
Bsp13I	TCCGGA	1 cut(s)	76
Bsp143I	GATC	8 cut(s)	237, 497, 694, 809, 854, 1087, 1219, 1730
BspACI	CCGC	7 cut(s)	88, 129, 218, 229, 605, 777, 1178
BspANI	GGCC	5 cut(s)	87, 595, 1022, 1274, 1433
BspCNI	CTCAG	4 cut(s)	102, 307, 610, 1480
BspDI	ATCGAT	1 cut(s)	1086
BspEI	TCCGGA	1 cut(s)	76
BspPI	GGATC	7 cut(s)	232, 505, 689, 702, 804, 817, 1738
BspQI	GCTCTTC	1 cut(s)	627
BspT104I	TTCGAA	1 cut(s)	1108
BspT107I	GGYRCC	3 cut(s)	1208, 1236, 1482
BsrDI	GCAATG	5 cut(s)	51, 163, 623, 801, 1287
BsrI	ACTGG	5 cut(s)	200, 496, 739, 919, 1576
BssECI	CCNNGG	3 cut(s)	1062, 1340, 1476
BssMI	GATC	8 cut(s)	237, 497, 694, 809, 854, 1087, 1219, 1730
BssSI	CACGAG	1 cut(s)	1276
BssT1I	CCWWGG	2 cut(s)	1062, 1476
Bst2BI	CACGAG	1 cut(s)	1276
Bst2UI	CCWGG	3 cut(s)	137, 249, 639
Bst6I	CTCTTC	2 cut(s)	627, 1644
BstBI	TTCGAA	1 cut(s)	1108
BstC8I	GCNNGC	5 cut(s)	67, 603, 689, 1696, 1747
BstDEI	CTNAG	6 cut(s)	110, 294, 597, 1401, 1467, 1845
BstF5I	GGATG	4 cut(s)	206, 586, 647, 1759
BstKTI	GATC	8 cut(s)	240, 500, 697, 812, 857, 1090, 1222, 1733
BstMAI	GTCTC	2 cut(s)	1648, 1706
BstMBI	GATC	8 cut(s)	237, 497, 694, 809, 854, 1087, 1219, 1730
BstMWI	GCNNNNNNNGC	7 cut(s)	226, 452, 634, 791, 857, 999, 1406
BstNI	CCWGG	3 cut(s)	137, 249, 639
BstNSI	RCATGY	3 cut(s)	273, 1464, 1749
BstSCI	CCNGG	3 cut(s)	135, 247, 637
BstSFI	CTRYAG	1 cut(s)	1537
BstV1I	GCAGC	6 cut(s)	238, 265, 351, 458, 1729, 1751
BstV2I	GAAGAC	3 cut(s)	894, 1006, 1611
BstX2I	RGATCY	4 cut(s)	497, 694, 809, 1730
BstYI	RGATCY	4 cut(s)	497, 694, 809, 1730
Bsu15I	ATCGAT	1 cut(s)	1086
BsuI	GTATCC	1 cut(s)	114
BsuRI	GGCC	5 cut(s)	87, 595, 1022, 1274, 1433
BsuTUI	ATCGAT	1 cut(s)	1086
BtgZI	GCGATG	1 cut(s)	1023
BtrI	CACGTC	2 cut(s)	836, 1612
BtsCI	GGATG	4 cut(s)	206, 586, 647, 1759
BtsI	GCAGTG	1 cut(s)	1056
BtsIMutI	CAGTG	6 cut(s)	107, 158, 167, 345, 1056, 1249
Cac8I	GCNNGC	5 cut(s)	67, 603, 689, 1696, 1747
Cfr13I	GGNCC	2 cut(s)	748, 1272
ClaI	ATCGAT	1 cut(s)	1086
Csp6I	GTAC	5 cut(s)	912, 1209, 1237, 1483, 1807
CspCI	CAANNNNNGTGG	4 cut(s)	316, 351, 475, 510
CviAII	CATG	6 cut(s)	270, 358, 1229, 1461, 1746, 1780
CviQI	GTAC	5 cut(s)	912, 1209, 1237, 1483, 1807
DdeI	CTNAG	6 cut(s)	110, 294, 597, 1401, 1467, 1845
DpnI	GATC	8 cut(s)	239, 499, 696, 811, 856, 1089, 1221, 1732
DpnII	GATC	8 cut(s)	237, 497, 694, 809, 854, 1087, 1219, 1730
DriI	GACNNNNNGTC	1 cut(s)	1363
EaeI	YGGCCR	2 cut(s)	85, 1431
Eam1104I	CTCTTC	2 cut(s)	627, 1644
Eam1105I	GACNNNNNGTC	1 cut(s)	1363
EarI	CTCTTC	2 cut(s)	627, 1644
EciI	GGCGGA	1 cut(s)	766
Eco130I	CCWWGG	2 cut(s)	1062, 1476
Eco47I	GGWCC	1 cut(s)	748
Eco57I	CTGAAG	1 cut(s)	1326
EcoO109I	RGGNCCY	1 cut(s)	748
EcoRI	GAATTC	1 cut(s)	1110
EcoRII	CCWGG	3 cut(s)	135, 247, 637
EcoT14I	CCWWGG	2 cut(s)	1062, 1476
ErhI	CCWWGG	2 cut(s)	1062, 1476
FaeI	CATG	6 cut(s)	273, 361, 1232, 1464, 1749, 1783
FalI	AAGNNNNNCTT	2 cut(s)	969, 1001
FaqI	GGGAC	2 cut(s)	761, 1184
FatI	CATG	6 cut(s)	269, 357, 1228, 1460, 1745, 1779
FauNDI	CATATG	1 cut(s)	413
FbaI	TGATCA	1 cut(s)	1219
Fnu4HI	GCNGC	8 cut(s)	88, 130, 227, 279, 340, 447, 1740, 1743
FokI	GGATG	4 cut(s)	193, 593, 654, 1766
Fsp4HI	GCNGC	8 cut(s)	88, 130, 227, 279, 340, 447, 1740, 1743
FspBI	CTAG	4 cut(s)	702, 867, 1139, 1487
GluI	GCNGC	8 cut(s)	88, 130, 227, 279, 340, 447, 1740, 1743
HaeIII	GGCC	5 cut(s)	87, 595, 1022, 1274, 1433
HapII	CCGG	3 cut(s)	77, 629, 692
Hin1II	CATG	6 cut(s)	273, 361, 1232, 1464, 1749, 1783
HincII	GTYRAC	1 cut(s)	1569
HindII	GTYRAC	1 cut(s)	1569
HindIII	AAGCTT	1 cut(s)	1679
HinfI	GANTC	3 cut(s)	569, 1328, 1442
HpaII	CCGG	3 cut(s)	77, 629, 692
HphI	GGTGA	2 cut(s)	1276, 1286
Hpy166II	GTNNAC	3 cut(s)	1126, 1569, 1615
Hpy188I	TCNGA	2 cut(s)	884, 1145
Hpy188III	TCNNGA	3 cut(s)	77, 1163, 1633
Hpy8I	GTNNAC	3 cut(s)	1126, 1569, 1615
Hpy99I	CGWCG	2 cut(s)	837, 1613
HpyAV	CCTTC	6 cut(s)	329, 334, 995, 1227, 1301, 1714
HpyCH4IV	ACGT	6 cut(s)	426, 535, 575, 835, 846, 1611
HpyF10VI	GCNNNNNNNGC	7 cut(s)	226, 452, 634, 791, 857, 999, 1406
HpyF3I	CTNAG	6 cut(s)	110, 294, 597, 1401, 1467, 1845
HpySE526I	ACGT	6 cut(s)	426, 535, 575, 835, 846, 1611
Hsp92II	CATG	6 cut(s)	273, 361, 1232, 1464, 1749, 1783
KflI	GGGWCCC	1 cut(s)	748
Kpn2I	TCCGGA	1 cut(s)	76
KpnI	GGTACC	3 cut(s)	1212, 1240, 1486
Ksp22I	TGATCA	1 cut(s)	1219
Kzo9I	GATC	8 cut(s)	237, 497, 694, 809, 854, 1087, 1219, 1730
LguI	GCTCTTC	1 cut(s)	627
LmnI	GCTCC	4 cut(s)	36, 118, 404, 779
Lsp1109I	GCAGC	6 cut(s)	238, 265, 351, 458, 1729, 1751
LweI	GCATC	5 cut(s)	458, 603, 632, 1092, 1654
MaeI	CTAG	4 cut(s)	702, 867, 1139, 1487
MaeII	ACGT	6 cut(s)	426, 535, 575, 835, 846, 1611
MaeIII	GTNAC	8 cut(s)	202, 648, 1042, 1260, 1355, 1435, 1448, 1822
MalI	GATC	8 cut(s)	239, 499, 696, 811, 856, 1089, 1221, 1732
MboI	GATC	8 cut(s)	237, 497, 694, 809, 854, 1087, 1219, 1730
MboII	GAAGA	7 cut(s)	492, 644, 899, 1006, 1066, 1616, 1661
MfeI	CAATTG	1 cut(s)	1514
MflI	RGATCY	4 cut(s)	497, 694, 809, 1730
MhlI	GDGCHC	2 cut(s)	116, 1468
MlyI	GAGTC	1 cut(s)	563
MmeI	TCCRAC	2 cut(s)	265, 558
MroI	TCCGGA	1 cut(s)	76
MseI	TTAA	8 cut(s)	213, 392, 828, 1148, 1184, 1593, 1643, 1683
MslI	CAYNNNNRTG	3 cut(s)	95, 1049, 1227
MspA1I	CMGCKG	2 cut(s)	229, 1742
MspI	CCGG	3 cut(s)	77, 629, 692
MspR9I	CCNGG	3 cut(s)	137, 249, 639
MunI	CAATTG	1 cut(s)	1514
MvaI	CCWGG	3 cut(s)	137, 249, 639
MwoI	GCNNNNNNNGC	7 cut(s)	226, 452, 634, 791, 857, 999, 1406
NdeI	CATATG	1 cut(s)	413
NdeII	GATC	8 cut(s)	237, 497, 694, 809, 854, 1087, 1219, 1730
NlaIII	CATG	6 cut(s)	273, 361, 1232, 1464, 1749, 1783
NmeAIII	GCCGAG	1 cut(s)	1365
NmuCI	GTSAC	6 cut(s)	202, 1042, 1260, 1355, 1435, 1448
NspI	RCATGY	3 cut(s)	273, 1464, 1749
NspV	TTCGAA	1 cut(s)	1108
OliI	CACNNNNGTG	2 cut(s)	95, 1049
PaeI	GCATGC	1 cut(s)	1749
PciI	ACATGT	2 cut(s)	269, 1460
PciSI	GCTCTTC	1 cut(s)	627
PcsI	WCGNNNNNNNCGW	1 cut(s)	1332
PfeI	GAWTC	2 cut(s)	1328, 1442
PflFI	GACNNNGTC	1 cut(s)	837
PkrI	GCNGC	8 cut(s)	89, 131, 228, 280, 341, 448, 1741, 1744
PleI	GAGTC	1 cut(s)	563
PpsI	GAGTC	1 cut(s)	563
PpuMI	RGGWCCY	1 cut(s)	748
PscI	ACATGT	2 cut(s)	269, 1460
PshBI	ATTAAT	1 cut(s)	1148
PsiI	TTATAA	1 cut(s)	824
Psp1406I	AACGTT	2 cut(s)	535, 846
Psp5II	RGGWCCY	1 cut(s)	748
Psp6I	CCWGG	3 cut(s)	135, 247, 637
PspGI	CCWGG	3 cut(s)	135, 247, 637
PspPI	GGNCC	2 cut(s)	748, 1272
PspPPI	RGGWCCY	1 cut(s)	748
PsuI	RGATCY	4 cut(s)	497, 694, 809, 1730
PsyI	GACNNNGTC	1 cut(s)	837
PvuII	CAGCTG	1 cut(s)	1742
RsaI	GTAC	5 cut(s)	913, 1210, 1238, 1484, 1808
RsaNI	GTAC	5 cut(s)	912, 1209, 1237, 1483, 1807
RseI	CAYNNNNRTG	3 cut(s)	95, 1049, 1227
SapI	GCTCTTC	1 cut(s)	627
SaqAI	TTAA	8 cut(s)	213, 392, 828, 1148, 1184, 1593, 1643, 1683
SatI	GCNGC	8 cut(s)	88, 130, 227, 279, 340, 447, 1740, 1743
Sau3AI	GATC	8 cut(s)	237, 497, 694, 809, 854, 1087, 1219, 1730
Sau96I	GGNCC	2 cut(s)	748, 1272
ScaI	AGTACT	1 cut(s)	913
SchI	GAGTC	1 cut(s)	563
ScrFI	CCNGG	3 cut(s)	137, 249, 639
SduI	GDGCHC	2 cut(s)	116, 1468
SfaNI	GCATC	5 cut(s)	458, 603, 632, 1092, 1654
SfcI	CTRYAG	1 cut(s)	1537
SfuI	TTCGAA	1 cut(s)	1108
SinI	GGWCC	1 cut(s)	748
SmiMI	CAYNNNNRTG	3 cut(s)	95, 1049, 1227
SmlI	CTYRAG	1 cut(s)	1163
SmoI	CTYRAG	1 cut(s)	1163
SphI	GCATGC	1 cut(s)	1749
SsiI	CCGC	7 cut(s)	88, 129, 218, 229, 605, 777, 1178
SspMI	CTAG	4 cut(s)	702, 867, 1139, 1487
StyD4I	CCNGG	3 cut(s)	135, 247, 637
StyI	CCWWGG	2 cut(s)	1062, 1476
TaiI	ACGT	6 cut(s)	429, 538, 578, 838, 849, 1614
TaqI	TCGA	8 cut(s)	841, 1086, 1108, 1335, 1367, 1383, 1424, 1771
TaqII	GACCGA	1 cut(s)	1454
TatI	WGTACW	2 cut(s)	911, 1806
TauI	GCSGC	2 cut(s)	90, 132
TfiI	GAWTC	2 cut(s)	1328, 1442
Tru1I	TTAA	8 cut(s)	213, 392, 828, 1148, 1184, 1593, 1643, 1683
Tru9I	TTAA	8 cut(s)	213, 392, 828, 1148, 1184, 1593, 1643, 1683
TscAI	CASTG	6 cut(s)	114, 158, 174, 352, 1056, 1249
TseFI	GTSAC	6 cut(s)	202, 1042, 1260, 1355, 1435, 1448
TseI	GCWGC	6 cut(s)	226, 278, 339, 446, 1739, 1742
Tsp45I	GTSAC	6 cut(s)	202, 1042, 1260, 1355, 1435, 1448
TspDTI	ATGAA	6 cut(s)	374, 471, 1401, 1733, 1796, 1812
TspGWI	ACGGA	3 cut(s)	131, 199, 687
TspRI	CASTG	6 cut(s)	114, 158, 174, 352, 1056, 1249
Tth111I	GACNNNGTC	1 cut(s)	837
VpaK11BI	GGWCC	1 cut(s)	748
VspI	ATTAAT	1 cut(s)	1148
XapI	RAATTY	6 cut(s)	7, 300, 562, 931, 1092, 1110
XceI	RCATGY	3 cut(s)	273, 1464, 1749
XspI	CTAG	4 cut(s)	702, 867, 1139, 1487
ZrmI	AGTACT	1 cut(s)	913

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.