Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0013898

Physical Location & Seq

Genomic Coordinates Reverse (-)

11209138 .. 11211828

Gene Structure 2691 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G011540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGAGGAATTTTAGTGTGGTTTCTTTTCTGCTTCTCAAATTGGTAATGTTATGGTGCATAACCGCCAGCCGTTGTCCGGATTGTGGCCGCACCACCGTGCCGTATCCACTGAGCACGGAGCCAAACTGCGGTGACCAGGCATACAAGGTTCAGTGCAATGCAGGAACACTGTGGTTCCACACCCTCAACAACTCCTATCCAGTCACATCCGTTAATCCGCTAACGCAGCGGATTGTGATCCAACCACCAGGAGTGGCAAACAAGAACACATGTGTCGCTGCTGATTTCCAATCTCAGGGAATTTTGCTGGACAACAACCTTCCCTTCAACATTAGTGGCAGCAACACTGTGATAGGCATGAACTGTTCAACTGAAATGCTTACCACCTCCTTAAACTGCTCCTCCAATAGCATATGCCACGACTACGTTAGGCACAATCCAATGGCATCATCAGCTTGTGGGAACTTGTCATTATGTTGTTCATACAAAACTGGTGGATCTTCAAATGCCTACAAAATCAGGGTTAGAAAGGAACGTTGTGTTGCCTATGTGAGTTTTGTGAATTTGGACCCTGCATTGGATGTGAGCAAGTGGCCTCAGCCTGCGGTTGAGATGCAATGGGCAAACTCGGTGTGCTTGCCGGATCCGTCCAGTGCCAAAGAGAGGAAGTGCTTGTGCAAGACTGGGTTCAAATGGGACCCCATCAATGGAATATGTCAAAACATAAAGTGTAAAAAGTTGAGAGGATGCAAACGGAAAAAGTTTGTAGCCCCAGTCGTTGGAGGCTCCGCCTTTGCTGTTGTTGCAATGCTAATTGGAGGATCCTCTGCCTTTATAATTAAGCGACGTGGTCGAAACGTTGCAAGATCAGCAGAGTCTAGCTTGACAAAGTTCAGAGAAGACATACTAAATGCTAACAGTAGTACTGGCAAATCAGCCAAGAATTTCACAGGCAAAGAAATCACAAAAGCAACCAACAACTTCTCCAAAGACAACCTTCTTGGCTCCGGTGGCTTTGGCGATGTCTTCAAGGCCACACTTGACGATGGAACTGTCACAGCAGTGAAGAAAGCCAAGGCTGGAAACATAAAGGGCATCGATCAAATTCTCAACGAAGTTCGAATTCTTTGCCAAGTAAACCACAGAAGCCTAGTCAGATTAATGGGTTGTTGTCTTGAGCTTGAACAACCGCTTTTAATCTACGAGTATGTCCCAAACGGTACCCTTTTTGATCATCTACATGGAAGTTACCACAGTGCCACCAAAAGTGTATCACTAACTTGGGCCACGAGGCTCACCATTGCTCACCAAACTGCTGAAGGACTTGCCTATCTGCACGATTCAGTCGAGCCAAGGATTTACCACCGTGACATAAAGTCGAGCAACATTTTACTCGATGAAAAGCTCAATGCTAAGGTTGCTGATTTTGGTCTGTCGAGGTTGGCCGTGACCGAATCAAGTCACATTACAACATGTGCTCAGGGAACCTTGGGGTACGTAGACCCCGACTATTACTTGAACTTTCAATTGACAGACAAGAGTGATGTCTATAGCTTCGGAGTTGTGTTGTTAGAGCTGTTGACTGGTAAGAAAGCTATTGATTTTAACAGACAAGAAGACGACGTGAACTTGGTGGTTTATGTCAAGAACATTTTAAGGGAAGACAGACTAAGTGATGCCATTGACCCTAAGCTTAAAGAGGAGGCTGGCACAATGGCTCTGGAGACTATGAAGGCATTAGGGTCTCTGGCAGCTGCATGCTTGGATGAGAGGAGGCAAAATCGACCCTCCATGAAAGAAGTTGCTGATGAAATTGAGTACATGATTAGTATCGTTACAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

614

Amino Acids

67.47

Weight (kDa)

8.71

Isoelectric Point (pI)

33.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	25 - 80	1.4e-07	Wall-associated receptor kinase galacturonan-binding
Pkinase	PF00069	329 - 602	1.4e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	331 - 604	2.2e-43	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53840
malus_domestica	MD12G1149600.v1.1
prunus_persica	Prupe.6G261100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0465331 RchiOBHm_Chr3g0465341
rosa_laevigata	RLG00000024646
rosa_multiflora	Rmu_co8329097.1_g000001 Rmu_co8386781.1_g000001
rosa_roxburghii	Rroxscaffold_6G00415120
rosa_rugosa	Rorug03G0076200 Rorug03G0076300
rosa_samantha	Rh3BG141100 Rh3CG142000 Rh3CG142100 Rh3DG142100 Rh3DG142200
rosa_wichuraiana	Rw3G011540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	836
Acc65I	GGTACC	1 cut(s)	1220
AccB1I	GGYRCC	1 cut(s)	1220
AccB7I	CCANNNNNTGG	1 cut(s)	779
AccI	GTMKAC	1 cut(s)	1500
AccIII	TCCGGA	1 cut(s)	76
AciI	CCGC	8 cut(s)	63, 88, 129, 218, 229, 605, 789, 1190
AclI	AACGTT	2 cut(s)	535, 858
AclWI	GGATC	6 cut(s)	232, 505, 638, 651, 816, 829
AcoI	YGGCCR	2 cut(s)	85, 1443
AcsI	RAATTY	6 cut(s)	7, 300, 562, 943, 1104, 1122
AcuI	CTGAAG	1 cut(s)	1338
AfaI	GTAC	4 cut(s)	925, 1222, 1496, 1820
AfiI	CCNNNNNNNGG	8 cut(s)	76, 83, 128, 295, 577, 663, 707, 779
AflIII	ACRYGT	2 cut(s)	269, 1472
AgsI	TTSAA	8 cut(s)	328, 369, 504, 691, 1030, 1184, 1519, 1526
AhdI	GACNNNNNGTC	1 cut(s)	1375
AjiI	CACGTC	2 cut(s)	848, 1624
AjnI	CCWGG	2 cut(s)	135, 247
AleI	CACNNNNGTG	2 cut(s)	95, 1061
AluBI	AGCT	9 cut(s)	455, 882, 1180, 1405, 1554, 1576, 1595, 1693, 1754
AluI	AGCT	9 cut(s)	455, 882, 1180, 1405, 1554, 1576, 1595, 1693, 1754
Alw21I	GWGCWC	2 cut(s)	116, 1480
Alw26I	GTCTC	2 cut(s)	1718, 1749
AlwI	GGATC	6 cut(s)	232, 505, 638, 651, 816, 829
Aor13HI	TCCGGA	1 cut(s)	76
AoxI	GGCC	5 cut(s)	85, 593, 1032, 1284, 1443
ApeKI	GCWGC	5 cut(s)	226, 278, 339, 1751, 1754
ApoI	RAATTY	6 cut(s)	7, 300, 562, 943, 1104, 1122
AseI	ATTAAT	1 cut(s)	1160
Asp718I	GGTACC	1 cut(s)	1220
AspS9I	GGNCC	3 cut(s)	568, 697, 1284
AsuHPI	GGTGA	3 cut(s)	143, 1288, 1298
AsuII	TTCGAA	1 cut(s)	1120
AvaII	GGWCC	2 cut(s)	568, 697
BamHI	GGATCC	2 cut(s)	643, 821
BanI	GGYRCC	1 cut(s)	1220
BauI	CACGAG	1 cut(s)	1288
BbsI	GAAGAC	4 cut(s)	906, 1018, 1623, 1668
Bbv12I	GWGCWC	2 cut(s)	116, 1480
BbvCI	CCTCAGC	1 cut(s)	597
BbvI	GCAGC	5 cut(s)	238, 265, 351, 1741, 1763
BccI	CCATC	2 cut(s)	710, 1040
BceAI	ACGGC	3 cut(s)	54, 85, 1430
BcgI	CGANNNNNNTGC	2 cut(s)	1110, 1144
BciT130I	CCWGG	2 cut(s)	137, 249
BciVI	GTATCC	1 cut(s)	114
BclI	TGATCA	1 cut(s)	1231
BcoDI	GTCTC	2 cut(s)	1718, 1749
BfaI	CTAG	2 cut(s)	879, 1151
BfmI	CTRYAG	1 cut(s)	1549
BfuI	GTATCC	1 cut(s)	114
BisI	GCNGC	6 cut(s)	88, 227, 279, 340, 1752, 1755
BlsI	GCNGC	6 cut(s)	89, 228, 280, 341, 1753, 1756
BmcAI	AGTACT	1 cut(s)	925
Bme1390I	CCNGG	2 cut(s)	137, 249
Bme18I	GGWCC	2 cut(s)	568, 697
BmeRI	GACNNNNNGTC	1 cut(s)	1375
BmgBI	CACGTC	2 cut(s)	848, 1624
BmgT120I	GGNCC	3 cut(s)	568, 697, 1284
BmrFI	CCNGG	2 cut(s)	137, 249
BmrI	ACTGGG	2 cut(s)	693, 767
BmsI	GCATC	5 cut(s)	455, 603, 737, 1104, 1666
BmuI	ACTGGG	2 cut(s)	693, 767
BpiI	GAAGAC	4 cut(s)	906, 1018, 1623, 1668
BpmI	CTGGAG	1 cut(s)	1742
Bpu10I	CCTNAGC	4 cut(s)	597, 1413, 1479, 1689
Bpu14I	TTCGAA	1 cut(s)	1120
BpuEI	CTTGAG	1 cut(s)	1196
Bsa29I	ATCGAT	1 cut(s)	1098
BsaAI	YACGTR	1 cut(s)	1498
BsaBI	GATNNNNATC	2 cut(s)	236, 1829
BsaI	GGTCTC	1 cut(s)	1749
BsaJI	CCNNGG	3 cut(s)	1074, 1352, 1488
BsaWI	WCCGGW	2 cut(s)	76, 1007
BsaXI	ACNNNNNCTCC	4 cut(s)	386, 416, 968, 998
Bsc4I	CCNNNNNNNGG	8 cut(s)	76, 83, 128, 295, 577, 663, 707, 779
Bse1I	ACTGG	7 cut(s)	200, 496, 651, 688, 773, 931, 1588
Bse3DI	GCAATG	4 cut(s)	163, 623, 813, 1299
Bse8I	GATNNNNATC	2 cut(s)	236, 1829
BseAI	TCCGGA	1 cut(s)	76
BseBI	CCWGG	2 cut(s)	137, 249
BseCI	ATCGAT	1 cut(s)	1098
BseDI	CCNNGG	3 cut(s)	1074, 1352, 1488
BseGI	GGATG	4 cut(s)	206, 586, 752, 1771
BseJI	GATNNNNATC	2 cut(s)	236, 1829
BseLI	CCNNNNNNNGG	8 cut(s)	76, 83, 128, 295, 577, 663, 707, 779
BseMI	GCAATG	4 cut(s)	163, 623, 813, 1299
BseMII	CTCAG	4 cut(s)	101, 308, 611, 1493
BseNI	ACTGG	7 cut(s)	200, 496, 651, 688, 773, 931, 1588
BseRI	GAGGAG	3 cut(s)	391, 1715, 1786
BseXI	GCAGC	5 cut(s)	238, 265, 351, 1741, 1763
BsgI	GTGCAG	1 cut(s)	1319
BshFI	GGCC	5 cut(s)	87, 595, 1034, 1286, 1445
BshNI	GGYRCC	1 cut(s)	1220
BshVI	ATCGAT	1 cut(s)	1098
BsiHKAI	GWGCWC	2 cut(s)	116, 1480
BsiSI	CCGG	3 cut(s)	77, 641, 1008
BslFI	GGGAC	2 cut(s)	710, 1196
BslI	CCNNNNNNNGG	8 cut(s)	76, 83, 128, 295, 577, 663, 707, 779
BsmAI	GTCTC	2 cut(s)	1718, 1749
BsmFI	GGGAC	2 cut(s)	710, 1196
BsnI	GGCC	5 cut(s)	87, 595, 1034, 1286, 1445
Bso31I	GGTCTC	1 cut(s)	1749
Bsp119I	TTCGAA	1 cut(s)	1120
Bsp1286I	GDGCHC	2 cut(s)	116, 1480
Bsp13I	TCCGGA	1 cut(s)	76
Bsp143I	GATC	7 cut(s)	237, 497, 643, 821, 866, 1099, 1231
BspACI	CCGC	8 cut(s)	63, 88, 129, 218, 229, 605, 789, 1190
BspANI	GGCC	5 cut(s)	87, 595, 1034, 1286, 1445
BspCNI	CTCAG	4 cut(s)	102, 307, 610, 1492
BspDI	ATCGAT	1 cut(s)	1098
BspEI	TCCGGA	1 cut(s)	76
BspPI	GGATC	6 cut(s)	232, 505, 638, 651, 816, 829
BspT104I	TTCGAA	1 cut(s)	1120
BspT107I	GGYRCC	1 cut(s)	1220
BspTNI	GGTCTC	1 cut(s)	1749
BsrDI	GCAATG	4 cut(s)	163, 623, 813, 1299
BsrI	ACTGG	7 cut(s)	200, 496, 651, 688, 773, 931, 1588
BssECI	CCNNGG	3 cut(s)	1074, 1352, 1488
BssMI	GATC	7 cut(s)	237, 497, 643, 821, 866, 1099, 1231
BssSI	CACGAG	1 cut(s)	1288
BssT1I	CCWWGG	3 cut(s)	1074, 1352, 1488
Bst2BI	CACGAG	1 cut(s)	1288
Bst2UI	CCWGG	2 cut(s)	137, 249
Bst4CI	ACNGT	9 cut(s)	97, 171, 349, 365, 920, 1054, 1220, 1256, 1367
BstBAI	YACGTR	1 cut(s)	1498
BstBI	TTCGAA	1 cut(s)	1120
BstC8I	GCNNGC	5 cut(s)	67, 603, 638, 1708, 1759
BstDEI	CTNAG	7 cut(s)	110, 294, 597, 1413, 1479, 1670, 1689
BstEII	GGTNACC	1 cut(s)	131
BstF5I	GGATG	4 cut(s)	206, 586, 752, 1771
BstKTI	GATC	7 cut(s)	240, 500, 646, 824, 869, 1102, 1234
BstMAI	GTCTC	2 cut(s)	1718, 1749
BstMBI	GATC	7 cut(s)	237, 497, 643, 821, 866, 1099, 1231
BstMWI	GCNNNNNNNGC	6 cut(s)	226, 452, 803, 869, 1011, 1418
BstNI	CCWGG	2 cut(s)	137, 249
BstNSI	RCATGY	3 cut(s)	273, 1476, 1761
BstPI	GGTNACC	1 cut(s)	131
BstSCI	CCNGG	2 cut(s)	135, 247
BstSFI	CTRYAG	1 cut(s)	1549
BstSNI	TACGTA	1 cut(s)	1498
BstV1I	GCAGC	5 cut(s)	238, 265, 351, 1741, 1763
BstV2I	GAAGAC	4 cut(s)	906, 1018, 1623, 1668
BstX2I	RGATCY	3 cut(s)	497, 643, 821
BstYI	RGATCY	3 cut(s)	497, 643, 821
Bsu15I	ATCGAT	1 cut(s)	1098
BsuI	GTATCC	1 cut(s)	114
BsuRI	GGCC	5 cut(s)	87, 595, 1034, 1286, 1445
BsuTUI	ATCGAT	1 cut(s)	1098
BtgZI	GCGATG	1 cut(s)	1035
BtrI	CACGTC	2 cut(s)	848, 1624
BtsCI	GGATG	4 cut(s)	206, 586, 752, 1771
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	7 cut(s)	107, 158, 167, 345, 658, 1068, 1261
Cac8I	GCNNGC	5 cut(s)	67, 603, 638, 1708, 1759
Cfr13I	GGNCC	3 cut(s)	568, 697, 1284
ClaI	ATCGAT	1 cut(s)	1098
Csp6I	GTAC	4 cut(s)	924, 1221, 1495, 1819
CspCI	CAANNNNNGTGG	4 cut(s)	316, 351, 475, 510
CviAII	CATG	7 cut(s)	270, 358, 1241, 1473, 1758, 1792, 1822
CviQI	GTAC	4 cut(s)	924, 1221, 1495, 1819
DdeI	CTNAG	7 cut(s)	110, 294, 597, 1413, 1479, 1670, 1689
DpnI	GATC	7 cut(s)	239, 499, 645, 823, 868, 1101, 1233
DpnII	GATC	7 cut(s)	237, 497, 643, 821, 866, 1099, 1231
DriI	GACNNNNNGTC	1 cut(s)	1375
EaeI	YGGCCR	2 cut(s)	85, 1443
Eam1105I	GACNNNNNGTC	1 cut(s)	1375
EciI	GGCGGA	1 cut(s)	778
Eco105I	TACGTA	1 cut(s)	1498
Eco130I	CCWWGG	3 cut(s)	1074, 1352, 1488
Eco31I	GGTCTC	1 cut(s)	1749
Eco47I	GGWCC	2 cut(s)	568, 697
Eco57I	CTGAAG	1 cut(s)	1338
Eco91I	GGTNACC	1 cut(s)	131
EcoO109I	RGGNCCY	1 cut(s)	697
EcoO65I	GGTNACC	1 cut(s)	131
EcoRI	GAATTC	1 cut(s)	1122
EcoRII	CCWGG	2 cut(s)	135, 247
EcoT14I	CCWWGG	3 cut(s)	1074, 1352, 1488
ErhI	CCWWGG	3 cut(s)	1074, 1352, 1488
FaeI	CATG	7 cut(s)	273, 361, 1244, 1476, 1761, 1795, 1825
FalI	AAGNNNNNCTT	2 cut(s)	981, 1013
FaqI	GGGAC	2 cut(s)	710, 1196
FatI	CATG	7 cut(s)	269, 357, 1240, 1472, 1757, 1791, 1821
FauNDI	CATATG	1 cut(s)	413
FbaI	TGATCA	1 cut(s)	1231
FblI	GTMKAC	1 cut(s)	1500
Fnu4HI	GCNGC	6 cut(s)	88, 227, 279, 340, 1752, 1755
FokI	GGATG	4 cut(s)	193, 593, 759, 1778
Fsp4HI	GCNGC	6 cut(s)	88, 227, 279, 340, 1752, 1755
FspBI	CTAG	2 cut(s)	879, 1151
GluI	GCNGC	6 cut(s)	88, 227, 279, 340, 1752, 1755
GsuI	CTGGAG	1 cut(s)	1742
HaeIII	GGCC	5 cut(s)	87, 595, 1034, 1286, 1445
HapII	CCGG	3 cut(s)	77, 641, 1008
Hin1II	CATG	7 cut(s)	273, 361, 1244, 1476, 1761, 1795, 1825
HincII	GTYRAC	1 cut(s)	1581
HindII	GTYRAC	1 cut(s)	1581
HindIII	AAGCTT	1 cut(s)	1691
HinfI	GANTC	3 cut(s)	875, 1340, 1454
HpaII	CCGG	3 cut(s)	77, 641, 1008
HphI	GGTGA	3 cut(s)	143, 1288, 1298
Hpy166II	GTNNAC	4 cut(s)	1138, 1501, 1581, 1627
Hpy188I	TCNGA	3 cut(s)	896, 1157, 1559
Hpy188III	TCNNGA	4 cut(s)	77, 1175, 1645, 1721
Hpy8I	GTNNAC	4 cut(s)	1138, 1501, 1581, 1627
Hpy99I	CGWCG	2 cut(s)	849, 1625
HpyAV	CCTTC	5 cut(s)	329, 334, 1007, 1313, 1726
HpyCH4III	ACNGT	9 cut(s)	97, 171, 349, 365, 920, 1054, 1220, 1256, 1367
HpyCH4IV	ACGT	6 cut(s)	426, 535, 847, 858, 1497, 1623
HpyF10VI	GCNNNNNNNGC	6 cut(s)	226, 452, 803, 869, 1011, 1418
HpyF3I	CTNAG	7 cut(s)	110, 294, 597, 1413, 1479, 1670, 1689
HpySE526I	ACGT	6 cut(s)	426, 535, 847, 858, 1497, 1623
Hsp92II	CATG	7 cut(s)	273, 361, 1244, 1476, 1761, 1795, 1825
KflI	GGGWCCC	1 cut(s)	697
Kpn2I	TCCGGA	1 cut(s)	76
KpnI	GGTACC	1 cut(s)	1224
Ksp22I	TGATCA	1 cut(s)	1231
Kzo9I	GATC	7 cut(s)	237, 497, 643, 821, 866, 1099, 1231
LmnI	GCTCC	4 cut(s)	118, 404, 791, 1010
Lsp1109I	GCAGC	5 cut(s)	238, 265, 351, 1741, 1763
LweI	GCATC	5 cut(s)	455, 603, 737, 1104, 1666
MaeI	CTAG	2 cut(s)	879, 1151
MaeII	ACGT	6 cut(s)	426, 535, 847, 858, 1497, 1623
MaeIII	GTNAC	8 cut(s)	131, 202, 1054, 1247, 1367, 1447, 1460, 1834
MalI	GATC	7 cut(s)	239, 499, 645, 823, 868, 1101, 1233
MboI	GATC	7 cut(s)	237, 497, 643, 821, 866, 1099, 1231
MboII	GAAGA	6 cut(s)	492, 911, 1018, 1078, 1628, 1673
MfeI	CAATTG	1 cut(s)	1526
MflI	RGATCY	3 cut(s)	497, 643, 821
MhlI	GDGCHC	2 cut(s)	116, 1480
MlyI	GAGTC	1 cut(s)	884
MmeI	TCCRAC	2 cut(s)	265, 760
MroI	TCCGGA	1 cut(s)	76
MseI	TTAA	9 cut(s)	213, 392, 840, 1160, 1196, 1605, 1655, 1695, 1843
MslI	CAYNNNNRTG	3 cut(s)	95, 1061, 1239
MspA1I	CMGCKG	2 cut(s)	229, 1754
MspI	CCGG	3 cut(s)	77, 641, 1008
MspR9I	CCNGG	2 cut(s)	137, 249
MunI	CAATTG	1 cut(s)	1526
MvaI	CCWGG	2 cut(s)	137, 249
MwoI	GCNNNNNNNGC	6 cut(s)	226, 452, 803, 869, 1011, 1418
NdeI	CATATG	1 cut(s)	413
NdeII	GATC	7 cut(s)	237, 497, 643, 821, 866, 1099, 1231
NlaIII	CATG	7 cut(s)	273, 361, 1244, 1476, 1761, 1795, 1825
NmuCI	GTSAC	6 cut(s)	131, 202, 1054, 1367, 1447, 1460
NspI	RCATGY	3 cut(s)	273, 1476, 1761
NspV	TTCGAA	1 cut(s)	1120
OliI	CACNNNNGTG	2 cut(s)	95, 1061
PaeI	GCATGC	1 cut(s)	1761
PciI	ACATGT	2 cut(s)	269, 1472
PcsI	WCGNNNNNNNCGW	2 cut(s)	1344, 1503
PfeI	GAWTC	2 cut(s)	1340, 1454
PflFI	GACNNNGTC	1 cut(s)	849
PflMI	CCANNNNNTGG	1 cut(s)	779
PkrI	GCNGC	6 cut(s)	89, 228, 280, 341, 1753, 1756
PleI	GAGTC	1 cut(s)	883
PpsI	GAGTC	1 cut(s)	883
Ppu21I	YACGTR	1 cut(s)	1498
PpuMI	RGGWCCY	1 cut(s)	697
PscI	ACATGT	2 cut(s)	269, 1472
PshBI	ATTAAT	1 cut(s)	1160
PsiI	TTATAA	1 cut(s)	836
Psp1406I	AACGTT	2 cut(s)	535, 858
Psp5II	RGGWCCY	1 cut(s)	697
Psp6I	CCWGG	2 cut(s)	135, 247
PspEI	GGTNACC	1 cut(s)	131
PspGI	CCWGG	2 cut(s)	135, 247
PspPI	GGNCC	3 cut(s)	568, 697, 1284
PspPPI	RGGWCCY	1 cut(s)	697
PsuI	RGATCY	3 cut(s)	497, 643, 821
PsyI	GACNNNGTC	1 cut(s)	849
PvuII	CAGCTG	1 cut(s)	1754
RsaI	GTAC	4 cut(s)	925, 1222, 1496, 1820
RsaNI	GTAC	4 cut(s)	924, 1221, 1495, 1819
RseI	CAYNNNNRTG	3 cut(s)	95, 1061, 1239
SaqAI	TTAA	9 cut(s)	213, 392, 840, 1160, 1196, 1605, 1655, 1695, 1843
SatI	GCNGC	6 cut(s)	88, 227, 279, 340, 1752, 1755
Sau3AI	GATC	7 cut(s)	237, 497, 643, 821, 866, 1099, 1231
Sau96I	GGNCC	3 cut(s)	568, 697, 1284
ScaI	AGTACT	1 cut(s)	925
SchI	GAGTC	1 cut(s)	884
ScrFI	CCNGG	2 cut(s)	137, 249
SduI	GDGCHC	2 cut(s)	116, 1480
SfaNI	GCATC	5 cut(s)	455, 603, 737, 1104, 1666
SfcI	CTRYAG	1 cut(s)	1549
SfuI	TTCGAA	1 cut(s)	1120
SinI	GGWCC	2 cut(s)	568, 697
SmiMI	CAYNNNNRTG	3 cut(s)	95, 1061, 1239
SmlI	CTYRAG	1 cut(s)	1175
SmoI	CTYRAG	1 cut(s)	1175
SnaBI	TACGTA	1 cut(s)	1498
SphI	GCATGC	1 cut(s)	1761
SsiI	CCGC	8 cut(s)	63, 88, 129, 218, 229, 605, 789, 1190
SspMI	CTAG	2 cut(s)	879, 1151
StyD4I	CCNGG	2 cut(s)	135, 247
StyI	CCWWGG	3 cut(s)	1074, 1352, 1488
TaaI	ACNGT	9 cut(s)	97, 171, 349, 365, 920, 1054, 1220, 1256, 1367
TaiI	ACGT	6 cut(s)	429, 538, 850, 861, 1500, 1626
TaqI	TCGA	8 cut(s)	853, 1098, 1120, 1347, 1379, 1395, 1436, 1783
TaqII	GACCGA	1 cut(s)	1466
TatI	WGTACW	2 cut(s)	923, 1818
TauI	GCSGC	1 cut(s)	90
TfiI	GAWTC	2 cut(s)	1340, 1454
Tru1I	TTAA	9 cut(s)	213, 392, 840, 1160, 1196, 1605, 1655, 1695, 1843
Tru9I	TTAA	9 cut(s)	213, 392, 840, 1160, 1196, 1605, 1655, 1695, 1843
TscAI	CASTG	7 cut(s)	114, 158, 174, 352, 658, 1068, 1261
TseFI	GTSAC	6 cut(s)	131, 202, 1054, 1367, 1447, 1460
TseI	GCWGC	5 cut(s)	226, 278, 339, 1751, 1754
Tsp45I	GTSAC	6 cut(s)	131, 202, 1054, 1367, 1447, 1460
TspDTI	ATGAA	6 cut(s)	374, 471, 1413, 1745, 1808, 1824
TspGWI	ACGGA	4 cut(s)	131, 199, 636, 769
TspRI	CASTG	7 cut(s)	114, 158, 174, 352, 658, 1068, 1261
Tth111I	GACNNNGTC	1 cut(s)	849
Van91I	CCANNNNNTGG	1 cut(s)	779
VpaK11BI	GGWCC	2 cut(s)	568, 697
VspI	ATTAAT	1 cut(s)	1160
XapI	RAATTY	6 cut(s)	7, 300, 562, 943, 1104, 1122
XceI	RCATGY	3 cut(s)	273, 1476, 1761
XmiI	GTMKAC	1 cut(s)	1500
XspI	CTAG	2 cut(s)	879, 1151
ZrmI	AGTACT	1 cut(s)	925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.