Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0005562

Physical Location & Seq

Genomic Coordinates Forward (+)

48945736 .. 48955472

Gene Structure 9737 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00428530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGCTGCAACCTCGTTGCCGGCTACTCCACCGCATCGCATCGAGGTCCGTCCGACCCCTAGCCTCCCTCCGGCAACTCGGTGCTGCTCGCTGCGCCATTCGAAGGGCTGATCCTCATCAAACGTGGCGCAGAAAGCACTACTACTGCAAGCAGGTCCCAGTTGTTATCCTGCGGATGGTAGAGGTGGAATGTGGATCTCACATTAGAAGCATGCACTTCCCATTGTTGCACGGCATTGCGAAAGGCTCAAGTAGAATGTCCATGCCAGAAGAACCAAGGTGCTCTAGGAGTAAGTGGTTCTTTACAATACAGGAAATAGAATCCCATTCTCCGTCGCGGAGAGATGGCATAGCGGGAAGAAAGAGCCCCAATTGCAGCGTTCATACTCGTTGTTGCTTCAAGAGATTGGGACGAAGCTTAAAGTCGGTGGTTTTAATTAGAAAGCCTAACATGAACAATAATCAGGATATGCATGAGGATGACTACTACTCGATCAAAGCTGCAAATCTTCATGTGCCTGCTGCAGAAGTAGCATTCACTGCCAAGCTTACCGCTACTTCCAACATGACCCAAAGTTATGTGTTATCATTCAACCACCACCAGCATGATCAGGCGGTTGGAGTGACGTCGTCGCAAGGCCGAAGTGGCGGTGATCATTGCTATAATGGTCACCAACCCTCCTCTGCAGCTTCGCAGCCAAGTTCTCGATGGAATCCAACCCCAGAGCAGTTACGGGTTCTGGATGAGCTGTACGGACATGGATTAAAGACACCGACGGCACAGAAAATCCGACAAGTGACTGCATGGCTTCGACACTTTGGAAAGATTGAAGGCAAGAATGTCTTCTACTGGTTTCAGAACCGCCGAGCGAGGGAGAGACAGAAGAAACAAAGAGAACTCATGTCCATGTGTCCGTATCACTCTAAGGAACAACAAGTTTGGAGTAACAAAGAATCTGCAGGAGGTATTGGTCTTGGGACTGAATTATCTCCAGGGTTGCAAAAGAGGATGAGCATGGTGACGGGTAATTACTCCGGTCAATTGGAGGAGCAAGCCTATTCGGCTATACCGACCTCGGAAGCACGCACAGCTACATTAATATACCCAAAGCTCTTGGACTATCATCATCCCCATTATGATTATGATTACGGTACGGTGTTGAGTGCACCCAATACTTACAAAGGAGCAAAAAGTAGATTAGAAACTCAAACTCTGGAGCTCTTTCCACTTGAGAGCGACAATGTTAAGGGTGTTAATGAATCACCTATGATCAGAACCACAAACACAGACAGTAATGAAGACTTCATGGCTAGCTACTTGCTCGGGAGCTTTGAGAGAGGGGCGTTGGCTAATGGTTTTGATGGCGAGCACCGAAAGACGGCTTGGATGCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0007275 GO:0008150 GO:0009553 GO:0009561 GO:0009653 GO:0009790 GO:0009791 GO:0009889 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0022604 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0040008 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048229 GO:0048314 GO:0048353 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048441 GO:0048444 GO:0048445 GO:0048446 GO:0048465 GO:0048467 GO:0048481 GO:0048482 GO:0048598 GO:0048608 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051171 GO:0051252 GO:0051301 GO:0051510 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

464

Amino Acids

52.78

Weight (kDa)

9.68

Isoelectric Point (pI)

59.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	235 - 294	2.9e-13	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005562)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr3g0450741 RchiOBHm_Chr3g0450831 RchiOBHm_Chr3g0450921 RchiOBHm_Chr3g0450931
rosa_laevigata	RLG00000025699 RLG00000025703 RLG00000025706
rosa_multiflora	Rmu_sc0000078.1_g000007
rosa_roxburghii	Rroxscaffold_6G00428400 Rroxscaffold_6G00428530 Rroxscaffold_7G00179190
rosa_rugosa	Rorug02G0630300 Rorug02G0630700
rosa_samantha	Rh3AG031000 Rh3AG031300 Rh3AG032100 Rh3AG033000 Rh3BG031400 Rh3BG031800 Rh3BG032500 Rh3BG033300 Rh3CG030200 Rh3CG030600 Rh3CG031200 Rh3CG032100 Rh3DG031200 Rh3DG031500 Rh3DG032100 Rh3DG033100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	629
Acc36I	ACCTGC	1 cut(s)	142
AccII	CGCG	1 cut(s)	337
AciI	CCGC	9 cut(s)	31, 172, 337, 353, 552, 614, 648, 862, 1390
AclWI	GGATC	2 cut(s)	104, 202
AcyI	GRCGYC	1 cut(s)	626
AfaI	GTAC	2 cut(s)	752, 1153
AfiI	CCNNNNNNNGG	5 cut(s)	69, 102, 175, 871, 1378
AgsI	TTSAA	3 cut(s)	400, 592, 830
AjnI	CCWGG	1 cut(s)	991
AjuI	GAANNNNNNNTTGG	1 cut(s)	1366
Alw21I	GWGCWC	4 cut(s)	284, 1168, 1221, 1371
Alw26I	GTCTC	1 cut(s)	871
Alw44I	GTGCAC	1 cut(s)	1164
AlwI	GGATC	2 cut(s)	104, 202
Ama87I	CYCGRG	1 cut(s)	1322
AoxI	GGCC	1 cut(s)	637
ApaLI	GTGCAC	1 cut(s)	1164
ApeKI	GCWGC	8 cut(s)	4, 83, 90, 375, 500, 521, 686, 694
AseI	ATTAAT	1 cut(s)	1097
Asp700I	GAANNNNTTC	1 cut(s)	842
AspLEI	GCGC	2 cut(s)	95, 129
AspS9I	GGNCC	2 cut(s)	45, 154
AsuHPI	GGTGA	4 cut(s)	662, 662, 1030, 1254
AsuII	TTCGAA	1 cut(s)	100
AsuNHI	GCTAGC	1 cut(s)	1310
AvaI	CYCGRG	1 cut(s)	1322
AvaII	GGWCC	2 cut(s)	45, 154
BaeGI	GKGCMC	1 cut(s)	1168
BanII	GRGCYC	2 cut(s)	368, 1221
BbsI	GAAGAC	2 cut(s)	835, 1305
Bbv12I	GWGCWC	4 cut(s)	284, 1168, 1221, 1371
BbvI	GCAGC	7 cut(s)	70, 77, 387, 487, 508, 698, 706
BccI	CCATC	4 cut(s)	169, 338, 702, 1355
BceAI	ACGGC	2 cut(s)	247, 792
BciT130I	CCWGG	1 cut(s)	993
BclI	TGATCA	3 cut(s)	607, 652, 1269
BcoDI	GTCTC	1 cut(s)	871
BfaI	CTAG	3 cut(s)	59, 285, 1311
BfmI	CTRYAG	3 cut(s)	522, 684, 957
BfuAI	ACCTGC	1 cut(s)	142
BglI	GCCNNNNNGGC	2 cut(s)	645, 1061
BisI	GCNGC	8 cut(s)	5, 84, 91, 376, 501, 522, 687, 695
BlsI	GCNGC	8 cut(s)	6, 85, 92, 377, 502, 523, 688, 696
Bme1390I	CCNGG	1 cut(s)	993
Bme18I	GGWCC	2 cut(s)	45, 154
BmeT110I	CYCGRG	1 cut(s)	1322
BmgT120I	GGNCC	2 cut(s)	45, 154
BmiI	GGNNCC	1 cut(s)	156
BmrFI	CCNGG	1 cut(s)	993
BmrI	ACTGGG	1 cut(s)	152
BmsI	GCATC	3 cut(s)	42, 47, 1377
BmtI	GCTAGC	1 cut(s)	1314
BmuI	ACTGGG	1 cut(s)	152
BpiI	GAAGAC	2 cut(s)	835, 1305
BpmI	CTGGAG	2 cut(s)	975, 1235
Bpu14I	TTCGAA	1 cut(s)	100
BpuEI	CTTGAG	2 cut(s)	232, 1250
BsaBI	GATNNNNATC	1 cut(s)	114
BsaHI	GRCGYC	1 cut(s)	626
BsaJI	CCNNGG	3 cut(s)	275, 992, 1074
BsaWI	WCCGGW	1 cut(s)	1034
BsaXI	ACNNNNNCTCC	2 cut(s)	662, 692
Bsc4I	CCNNNNNNNGG	5 cut(s)	69, 102, 175, 871, 1378
Bse118I	RCCGGY	1 cut(s)	18
Bse1I	ACTGG	2 cut(s)	158, 854
Bse3DI	GCAATG	2 cut(s)	234, 655
Bse8I	GATNNNNATC	1 cut(s)	114
BseBI	CCWGG	1 cut(s)	993
BseDI	CCNNGG	3 cut(s)	275, 992, 1074
BseGI	GGATG	6 cut(s)	180, 484, 748, 1014, 1126, 1392
BseJI	GATNNNNATC	1 cut(s)	114
BseLI	CCNNNNNNNGG	5 cut(s)	69, 102, 175, 871, 1378
BseMI	GCAATG	2 cut(s)	234, 655
BseNI	ACTGG	2 cut(s)	158, 854
BseRI	GAGGAG	2 cut(s)	670, 1061
BseSI	GKGCMC	1 cut(s)	1168
BseXI	GCAGC	7 cut(s)	70, 77, 387, 487, 508, 698, 706
Bsh1236I	CGCG	1 cut(s)	337
BshFI	GGCC	1 cut(s)	639
BsiHKAI	GWGCWC	4 cut(s)	284, 1168, 1221, 1371
BsiHKCI	CYCGRG	1 cut(s)	1322
BsiSI	CCGG	3 cut(s)	19, 70, 1035
BslFI	GGGAC	3 cut(s)	140, 423, 991
BslI	CCNNNNNNNGG	5 cut(s)	69, 102, 175, 871, 1378
BsmAI	GTCTC	1 cut(s)	871
BsmFI	GGGAC	3 cut(s)	140, 423, 991
BsmI	GAATGC	1 cut(s)	533
BsnI	GGCC	1 cut(s)	639
BsoBI	CYCGRG	1 cut(s)	1322
Bsp119I	TTCGAA	1 cut(s)	100
Bsp1286I	GDGCHC	5 cut(s)	284, 368, 1168, 1221, 1371
Bsp143I	GATC	6 cut(s)	109, 194, 492, 607, 652, 1269
BspACI	CCGC	9 cut(s)	31, 172, 337, 353, 552, 614, 648, 862, 1390
BspANI	GGCC	1 cut(s)	639
BspFNI	CGCG	1 cut(s)	337
BspLI	GGNNCC	1 cut(s)	156
BspMAI	CTGCAG	3 cut(s)	526, 688, 961
BspMI	ACCTGC	1 cut(s)	142
BspOI	GCTAGC	1 cut(s)	1314
BspPI	GGATC	2 cut(s)	104, 202
BspT104I	TTCGAA	1 cut(s)	100
BsrDI	GCAATG	2 cut(s)	234, 655
BsrFI	RCCGGY	1 cut(s)	18
BsrI	ACTGG	2 cut(s)	158, 854
BssAI	RCCGGY	1 cut(s)	18
BssECI	CCNNGG	3 cut(s)	275, 992, 1074
BssMI	GATC	6 cut(s)	109, 194, 492, 607, 652, 1269
BssNI	GRCGYC	1 cut(s)	626
BssT1I	CCWWGG	1 cut(s)	275
Bst2UI	CCWGG	1 cut(s)	993
Bst4CI	ACNGT	3 cut(s)	1151, 1156, 1292
BstACI	GRCGYC	1 cut(s)	626
BstAPI	GCANNNNNTGC	1 cut(s)	539
BstBI	TTCGAA	1 cut(s)	100
BstC8I	GCNNGC	9 cut(s)	20, 88, 149, 212, 519, 1053, 1084, 1312, 1367
BstDEI	CTNAG	1 cut(s)	924
BstEII	GGTNACC	1 cut(s)	668
BstF5I	GGATG	6 cut(s)	180, 484, 748, 1014, 1126, 1392
BstFNI	CGCG	1 cut(s)	337
BstHHI	GCGC	2 cut(s)	95, 129
BstKTI	GATC	6 cut(s)	112, 197, 495, 610, 655, 1272
BstMAI	GTCTC	1 cut(s)	871
BstMBI	GATC	6 cut(s)	109, 194, 492, 607, 652, 1269
BstMWI	GCNNNNNNNGC	8 cut(s)	92, 133, 372, 530, 539, 645, 1061, 1088
BstNI	CCWGG	1 cut(s)	993
BstNSI	RCATGY	1 cut(s)	214
BstPI	GGTNACC	1 cut(s)	668
BstSCI	CCNGG	1 cut(s)	991
BstSFI	CTRYAG	3 cut(s)	522, 684, 957
BstSLI	GKGCMC	1 cut(s)	1168
BstUI	CGCG	1 cut(s)	337
BstV1I	GCAGC	7 cut(s)	70, 77, 387, 487, 508, 698, 706
BstV2I	GAAGAC	2 cut(s)	835, 1305
BstX2I	RGATCY	1 cut(s)	194
BstYI	RGATCY	1 cut(s)	194
BsuRI	GGCC	1 cut(s)	639
BtgZI	GCGATG	1 cut(s)	19
BtsCI	GGATG	6 cut(s)	180, 484, 748, 1014, 1126, 1392
BtsI	GCAGTG	1 cut(s)	537
BtsIMutI	CAGTG	1 cut(s)	537
BveI	ACCTGC	1 cut(s)	142
Cac8I	GCNNGC	9 cut(s)	20, 88, 149, 212, 519, 1053, 1084, 1312, 1367
CfoI	GCGC	2 cut(s)	95, 129
Cfr10I	RCCGGY	1 cut(s)	18
Cfr13I	GGNCC	2 cut(s)	45, 154
Csp6I	GTAC	2 cut(s)	751, 1152
CviQI	GTAC	2 cut(s)	751, 1152
DdeI	CTNAG	1 cut(s)	924
DpnI	GATC	6 cut(s)	111, 196, 494, 609, 654, 1271
DpnII	GATC	6 cut(s)	109, 194, 492, 607, 652, 1269
Ecl136II	GAGCTC	1 cut(s)	1219
Eco130I	CCWWGG	1 cut(s)	275
Eco24I	GRGCYC	2 cut(s)	368, 1221
Eco47I	GGWCC	2 cut(s)	45, 154
Eco53kI	GAGCTC	1 cut(s)	1219
Eco88I	CYCGRG	1 cut(s)	1322
Eco91I	GGTNACC	1 cut(s)	668
EcoICRI	GAGCTC	1 cut(s)	1219
EcoO109I	RGGNCCY	1 cut(s)	154
EcoO65I	GGTNACC	1 cut(s)	668
EcoRII	CCWGG	1 cut(s)	991
EcoT14I	CCWWGG	1 cut(s)	275
EcoT22I	ATGCAT	1 cut(s)	474
EcoT38I	GRGCYC	2 cut(s)	368, 1221
ErhI	CCWWGG	1 cut(s)	275
FalI	AAGNNNNNCTT	4 cut(s)	284, 316, 827, 859
FaqI	GGGAC	3 cut(s)	140, 423, 991
FauI	CCCGC	1 cut(s)	346
FbaI	TGATCA	3 cut(s)	607, 652, 1269
Fnu4HI	GCNGC	8 cut(s)	5, 84, 91, 376, 501, 522, 687, 695
FokI	GGATG	5 cut(s)	187, 491, 755, 1021, 1113
FriOI	GRGCYC	2 cut(s)	368, 1221
Fsp4HI	GCNGC	8 cut(s)	5, 84, 91, 376, 501, 522, 687, 695
FspBI	CTAG	3 cut(s)	59, 285, 1311
GlaI	GCGC	2 cut(s)	94, 128
GluI	GCNGC	8 cut(s)	5, 84, 91, 376, 501, 522, 687, 695
GsuI	CTGGAG	2 cut(s)	975, 1235
HaeIII	GGCC	1 cut(s)	639
HapII	CCGG	3 cut(s)	19, 70, 1035
HhaI	GCGC	2 cut(s)	95, 129
Hin1I	GRCGYC	1 cut(s)	626
Hin6I	GCGC	2 cut(s)	93, 127
HinP1I	GCGC	2 cut(s)	93, 127
HindIII	AAGCTT	2 cut(s)	415, 545
HinfI	GANTC	4 cut(s)	320, 712, 953, 1259
HpaII	CCGG	3 cut(s)	19, 70, 1035
HphI	GGTGA	4 cut(s)	662, 662, 1030, 1254
Hpy166II	GTNNAC	1 cut(s)	1166
Hpy188I	TCNGA	5 cut(s)	53, 791, 858, 1078, 1274
Hpy188III	TCNNGA	6 cut(s)	400, 464, 705, 740, 1214, 1324
Hpy8I	GTNNAC	1 cut(s)	1166
Hpy99I	CGWCG	4 cut(s)	337, 631, 634, 778
HpyAV	CCTTC	2 cut(s)	96, 824
HpyCH4III	ACNGT	3 cut(s)	1151, 1156, 1292
HpyCH4IV	ACGT	2 cut(s)	122, 626
HpyF10VI	GCNNNNNNNGC	8 cut(s)	92, 133, 372, 530, 539, 645, 1061, 1088
HpyF3I	CTNAG	1 cut(s)	924
HpySE526I	ACGT	2 cut(s)	122, 626
Hsp92I	GRCGYC	1 cut(s)	626
HspAI	GCGC	2 cut(s)	93, 127
KroI	GCCGGC	1 cut(s)	18
KroNI	GCCGGC	1 cut(s)	20
Ksp22I	TGATCA	3 cut(s)	607, 652, 1269
Kzo9I	GATC	6 cut(s)	109, 194, 492, 607, 652, 1269
LmnI	GCTCC	4 cut(s)	1048, 1184, 1216, 1326
Lsp1109I	GCAGC	7 cut(s)	70, 77, 387, 487, 508, 698, 706
LweI	GCATC	3 cut(s)	42, 47, 1377
MaeI	CTAG	3 cut(s)	59, 285, 1311
MaeII	ACGT	2 cut(s)	122, 626
MaeIII	GTNAC	6 cut(s)	622, 668, 729, 796, 944, 1018
MalI	GATC	6 cut(s)	111, 196, 494, 609, 654, 1271
MboI	GATC	6 cut(s)	109, 194, 492, 607, 652, 1269
MboII	GAAGA	6 cut(s)	281, 369, 500, 835, 895, 1310
MfeI	CAATTG	2 cut(s)	370, 1040
MflI	RGATCY	1 cut(s)	194
MhlI	GDGCHC	5 cut(s)	284, 368, 1168, 1221, 1371
MluCI	AATT	5 cut(s)	370, 435, 983, 1027, 1040
MmeI	TCCRAC	5 cut(s)	76, 585, 598, 740, 814
Mph1103I	ATGCAT	1 cut(s)	474
MroNI	GCCGGC	1 cut(s)	18
MroXI	GAANNNNTTC	1 cut(s)	842
MseI	TTAA	6 cut(s)	419, 434, 764, 1097, 1245, 1254
MslI	CAYNNNNRTG	3 cut(s)	477, 603, 905
MspI	CCGG	3 cut(s)	19, 70, 1035
MspR9I	CCNGG	1 cut(s)	993
MunI	CAATTG	2 cut(s)	370, 1040
Mva1269I	GAATGC	1 cut(s)	533
MvaI	CCWGG	1 cut(s)	993
MvnI	CGCG	1 cut(s)	337
MwoI	GCNNNNNNNGC	8 cut(s)	92, 133, 372, 530, 539, 645, 1061, 1088
NaeI	GCCGGC	1 cut(s)	20
NdeII	GATC	6 cut(s)	109, 194, 492, 607, 652, 1269
NgoMIV	GCCGGC	1 cut(s)	18
NheI	GCTAGC	1 cut(s)	1310
NlaIV	GGNNCC	1 cut(s)	156
NmeAIII	GCCGAG	1 cut(s)	890
NmuCI	GTSAC	4 cut(s)	622, 668, 796, 1018
NsiI	ATGCAT	1 cut(s)	474
NspI	RCATGY	1 cut(s)	214
NspV	TTCGAA	1 cut(s)	100
PaeI	GCATGC	1 cut(s)	214
PcsI	WCGNNNNNNNCGW	1 cut(s)	1067
PctI	GAATGC	1 cut(s)	533
PdiI	GCCGGC	1 cut(s)	20
PdmI	GAANNNNTTC	1 cut(s)	842
PfeI	GAWTC	4 cut(s)	320, 712, 953, 1259
PflFI	GACNNNGTC	1 cut(s)	628
PkrI	GCNGC	8 cut(s)	6, 85, 92, 377, 502, 523, 688, 696
PpuMI	RGGWCCY	1 cut(s)	154
PshBI	ATTAAT	1 cut(s)	1097
Psp124BI	GAGCTC	1 cut(s)	1221
Psp5II	RGGWCCY	1 cut(s)	154
Psp6I	CCWGG	1 cut(s)	991
PspEI	GGTNACC	1 cut(s)	668
PspGI	CCWGG	1 cut(s)	991
PspN4I	GGNNCC	1 cut(s)	156
PspPI	GGNCC	2 cut(s)	45, 154
PspPPI	RGGWCCY	1 cut(s)	154
PstI	CTGCAG	3 cut(s)	526, 688, 961
PsuI	RGATCY	1 cut(s)	194
PsyI	GACNNNGTC	1 cut(s)	628
RsaI	GTAC	2 cut(s)	752, 1153
RsaNI	GTAC	2 cut(s)	751, 1152
RseI	CAYNNNNRTG	3 cut(s)	477, 603, 905
SacI	GAGCTC	1 cut(s)	1221
SaqAI	TTAA	6 cut(s)	419, 434, 764, 1097, 1245, 1254
SatI	GCNGC	8 cut(s)	5, 84, 91, 376, 501, 522, 687, 695
Sau3AI	GATC	6 cut(s)	109, 194, 492, 607, 652, 1269
Sau96I	GGNCC	2 cut(s)	45, 154
ScrFI	CCNGG	1 cut(s)	993
SduI	GDGCHC	5 cut(s)	284, 368, 1168, 1221, 1371
SfaNI	GCATC	3 cut(s)	42, 47, 1377
SfcI	CTRYAG	3 cut(s)	522, 684, 957
SfuI	TTCGAA	1 cut(s)	100
SinI	GGWCC	2 cut(s)	45, 154
SmiMI	CAYNNNNRTG	3 cut(s)	477, 603, 905
SmlI	CTYRAG	2 cut(s)	247, 1229
SmoI	CTYRAG	2 cut(s)	247, 1229
SphI	GCATGC	1 cut(s)	214
Sse9I	AATT	5 cut(s)	370, 435, 983, 1027, 1040
SsiI	CCGC	9 cut(s)	31, 172, 337, 353, 552, 614, 648, 862, 1390
SspMI	CTAG	3 cut(s)	59, 285, 1311
SstI	GAGCTC	1 cut(s)	1221
StyD4I	CCNGG	1 cut(s)	991
StyI	CCWWGG	1 cut(s)	275
TaaI	ACNGT	3 cut(s)	1151, 1156, 1292
TaiI	ACGT	2 cut(s)	125, 629
TaqI	TCGA	5 cut(s)	41, 100, 491, 706, 811
TasI	AATT	5 cut(s)	370, 435, 983, 1027, 1040
TfiI	GAWTC	4 cut(s)	320, 712, 953, 1259
Tru1I	TTAA	6 cut(s)	419, 434, 764, 1097, 1245, 1254
Tru9I	TTAA	6 cut(s)	419, 434, 764, 1097, 1245, 1254
TscAI	CASTG	1 cut(s)	544
TseFI	GTSAC	4 cut(s)	622, 668, 796, 1018
TseI	GCWGC	8 cut(s)	4, 83, 90, 375, 500, 521, 686, 694
Tsp45I	GTSAC	4 cut(s)	622, 668, 796, 1018
TspDTI	ATGAA	6 cut(s)	371, 467, 500, 1272, 1294, 1311
TspGWI	ACGGA	4 cut(s)	37, 321, 768, 903
TspRI	CASTG	1 cut(s)	544
Tth111I	GACNNNGTC	1 cut(s)	628
VneI	GTGCAC	1 cut(s)	1164
VpaK11BI	GGWCC	2 cut(s)	45, 154
VspI	ATTAAT	1 cut(s)	1097
XceI	RCATGY	1 cut(s)	214
XcmI	CCANNNNNNNNNTGG	1 cut(s)	705
XmnI	GAANNNNTTC	1 cut(s)	842
XspI	CTAG	3 cut(s)	59, 285, 1311
ZraI	GACGTC	1 cut(s)	627
Zsp2I	ATGCAT	1 cut(s)	474

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.