Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0006711

Physical Location & Seq

Genomic Coordinates Forward (+)

12673177 .. 12676164

Gene Structure 2988 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00172430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1329 bp

ATGTCTAATCCTCCCGACTCCTTCATCTTCTTCATCTTCTTCACACTCACGCTCCTCCTCATCGCCACCCGGGCCCACCCACCAGAACAACCCGAACCCGACACTCCCGTCACCCGCTTCCAGAACTACCTCCGGATCAAAACGGCCCACCCGAGCCCGGACTACTACGCCGCCGTCTCTTACCTCAAAGCCCAGGCCGAGTCCATCGGCCTCCACTCCCGCACCCTCCACTTCGCCCCCAACAAGCCCCTCCTCCTCCTCACCTGGCCCGGCTCCGACCCGACCCTCCCTTCCCTCCTCCTCAACTCCCACCTCGACTCCGTCCCCGCCGAGCCCTCCAAGTGGGCCCACCCGCCCTTCTCGGCCCACCGCACCCCCGAAGGCCACATCTTCGCCCGCGGCGCCCAGGACGACAAGTGCATCGCCATCCAGTACCTCGAGGCCATCCGCAACCTCAAAGCCGCAGACTTCAATCCAATCCGCACCGTCCACGTGTCCTACGTCCCCGAGGAGGAGATCGGCGGCCTCGACGGCGCCGCCAAGTTCGCCGTCTCTGACGAGTTCAAGGAACTGAAGGTCGGGTTTGTTTTGGACGAGGGTCAGGCCAGCCCCGGCGATGAGATTCGGGTCTTCTACGCTGATCGGACGCCGTGGAATTTGATCGTCAGGGCGAAGGGGATGCCCGGCCATGGTTCTAGAATGTTCGACAATAGTGCCATGGAGAATCTGATGAAGAGCGTTGAGCTTATGGCGAGGTTCAGGGAGGCTCAGTTCGATGAGGTCAAGGCCGGGAATGCTGCTAATTCGGAGGTCATTTCGGTCAATCCGGTTTATTTCAAATCCGGGATTGTTTCCGGCGATGGATATGCGATGAACATGCAACCTTCTGAGGCTGAGGCAGGGTTTGATATAAGAATTCCGCCTACCGTAGACCCGGAGCTTGTTAGAAAGAGGATTGCTGAGGAATGGGCGCCGGAAGCTAGGAACTTGACTTACAAGCTAATTGAGAAAGGACCCACTAGAGATTACACGGGTCGCCCTTTAATGACCCCAACCGATGATTCCAATCCATGGTGGTCTATTTTCAAGCAAGCTGTCACAGCAGCTGGAGGGAAACTTGCAAAGCCTGAAATCTTGGCTTCAACCACTGATGCACGGTTCATGAGACAGCAAGGCATTCCTACTCTCGGTTTCTCCCCAATGACAAATACTCCAATCTTACTGCACGACCATAATGAGTTCTTAAAAGATACCATATTCTTGAAAGGCATCAAAGTATATGAATCTATAATCAGTGCTTTGAGTTCCTTTGAGGGAGGATCACGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004046 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005615 GO:0016787 GO:0016810 GO:0016811 GO:0031982 GO:0042802 GO:0043226 GO:0043227 GO:0043230 GO:0044421 GO:0070062 GO:1903561

KEGG Pathways

Metabolic & Signaling

ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

M20_dimer Peptidase_M20 Peptidase_M28

Protein Analysis

442

Amino Acids

49.09

Weight (kDa)

5.88

Isoelectric Point (pI)

33.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M28	PF04389	87 - 225	7e-09	Peptidase family M28
Peptidase_M20	PF01546	100 - 432	1.5e-31	Peptidase family M20/M25/M40
M20_dimer	PF07687	221 - 327	5.2e-06	Peptidase dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006711)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44180 AT1G44180 AT1G44180 AT1G44820
fragaria_vesca	FvH4_2g26640 FvH4_2g26640 FvH4_2g26640
malus_domestica	MD15G1352300.v1.1
prunus_persica	Prupe.1G500800_v2.0.a1
pyrus_communis	pycom15g31580
rosa_chinensis	RchiOBHm_Chr6g0295491
rosa_laevigata	RLG00000000786 RLG00000011796 RLG00000013633 RLG00000018651 RLG00000028911
rosa_multiflora	Rmu_sc0005712.1_g000028 Rmu_sc0012290.1_g000002 Rmu_sc0012865.1_g000005
rosa_roxburghii	Rroxscaffold_7G00172430
rosa_rugosa	Rorug06G0251400
rosa_samantha	Rh6AG364600 Rh6BG373000 Rh6CG379200 Rh6DG365600
rosa_wichuraiana	Rw6G031840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	107
AbsI	CCTCGAGG	1 cut(s)	437
AccB1I	GGYRCC	3 cut(s)	401, 533, 970
AccB7I	CCANNNNNTGG	1 cut(s)	1071
AccI	GTMKAC	1 cut(s)	930
AccII	CGCG	1 cut(s)	399
AccIII	TCCGGA	1 cut(s)	132
AclWI	GGATC	2 cut(s)	143, 1327
AcoI	YGGCCR	1 cut(s)	685
AcsI	RAATTY	2 cut(s)	655, 915
AcuI	CTGAAG	1 cut(s)	593
AcvI	CACGTG	1 cut(s)	493
AcyI	GRCGYC	4 cut(s)	402, 534, 647, 971
AfaI	GTAC	1 cut(s)	434
AfiI	CCNNNNNNNGG	6 cut(s)	157, 342, 511, 689, 1071, 1187
AflIII	ACRYGT	1 cut(s)	492
AgsI	TTSAA	6 cut(s)	472, 565, 838, 1087, 1143, 1264
AjnI	CCWGG	3 cut(s)	192, 263, 405
AjuI	GAANNNNNNNTTGG	2 cut(s)	1045, 1077
AloI	GAACNNNNNNTCC	2 cut(s)	755, 787
AluBI	AGCT	6 cut(s)	745, 940, 980, 1000, 1094, 1106
AluI	AGCT	6 cut(s)	745, 940, 980, 1000, 1094, 1106
Alw26I	GTCTC	3 cut(s)	181, 556, 1159
AlwI	GGATC	2 cut(s)	143, 1327
AlwNI	CAGNNNCTG	1 cut(s)	1106
Ama87I	CYCGRG	4 cut(s)	69, 151, 437, 506
Aor13HI	TCCGGA	1 cut(s)	132
ApaI	GGGCCC	2 cut(s)	76, 349
ApeKI	GCWGC	2 cut(s)	797, 1103
ApoI	RAATTY	2 cut(s)	655, 915
AspLEI	GCGC	3 cut(s)	404, 536, 973
AspS9I	GGNCC	8 cut(s)	72, 73, 145, 267, 345, 346, 364, 1013
AsuC2I	CCSGG	9 cut(s)	70, 71, 158, 270, 612, 684, 790, 844, 935
AsuHPI	GGTGA	2 cut(s)	103, 253
AvaI	CYCGRG	4 cut(s)	69, 151, 437, 506
AvaII	GGWCC	1 cut(s)	1013
BaeGI	GKGCMC	2 cut(s)	76, 349
BanI	GGYRCC	3 cut(s)	401, 533, 970
BanII	GRGCYC	4 cut(s)	76, 158, 336, 349
BbrPI	CACGTG	1 cut(s)	493
BbsI	GAAGAC	1 cut(s)	622
BbvCI	CCTCAGC	2 cut(s)	894, 960
BbvI	GCAGC	2 cut(s)	784, 1115
BccI	CCATC	4 cut(s)	212, 434, 452, 854
BceAI	ACGGC	5 cut(s)	158, 159, 533, 547, 634
BcgI	CGANNNNNNTGC	8 cut(s)	661, 695, 695, 729, 848, 859, 882, 893
BciT130I	CCWGG	3 cut(s)	194, 265, 407
BcnI	CCSGG	9 cut(s)	70, 71, 158, 270, 612, 684, 790, 844, 935
BcoDI	GTCTC	3 cut(s)	181, 556, 1159
BfaI	CTAG	3 cut(s)	696, 981, 1020
BfoI	RGCGCY	3 cut(s)	405, 537, 974
BglI	GCCNNNNNGGC	2 cut(s)	71, 531
BisI	GCNGC	7 cut(s)	171, 400, 462, 523, 537, 798, 1104
BlsI	GCNGC	7 cut(s)	172, 401, 463, 524, 538, 799, 1105
Bme18I	GGWCC	1 cut(s)	1013
BmeT110I	CYCGRG	4 cut(s)	69, 151, 437, 506
BmgT120I	GGNCC	8 cut(s)	72, 73, 145, 267, 345, 346, 364, 1013
BmiI	GGNNCC	7 cut(s)	74, 274, 347, 403, 535, 972, 1015
BmsI	GCATC	4 cut(s)	429, 669, 1141, 1278
BoxI	GACNNNNGTC	1 cut(s)	597
BpiI	GAAGAC	1 cut(s)	622
BpmI	CTGGAG	1 cut(s)	1128
Bpu10I	CCTNAGC	2 cut(s)	894, 960
BpuMI	CCSGG	9 cut(s)	70, 71, 158, 270, 612, 684, 790, 844, 935
BsaAI	YACGTR	1 cut(s)	493
BsaBI	GATNNNNATC	1 cut(s)	1065
BsaHI	GRCGYC	4 cut(s)	402, 534, 647, 971
BsaWI	WCCGGW	2 cut(s)	132, 826
BsaXI	ACNNNNNCTCC	8 cut(s)	36, 66, 302, 332, 755, 785, 1195, 1225
Bsc4I	CCNNNNNNNGG	6 cut(s)	157, 342, 511, 689, 1071, 1187
Bse1I	ACTGG	1 cut(s)	430
Bse8I	GATNNNNATC	1 cut(s)	1065
BseAI	TCCGGA	1 cut(s)	132
BseBI	CCWGG	3 cut(s)	194, 265, 407
BseGI	GGATG	3 cut(s)	426, 444, 684
BseJI	GATNNNNATC	1 cut(s)	1065
BseLI	CCNNNNNNNGG	6 cut(s)	157, 342, 511, 689, 1071, 1187
BseMII	CTCAG	4 cut(s)	782, 879, 885, 951
BseNI	ACTGG	1 cut(s)	430
BseRI	GAGGAG	9 cut(s)	44, 47, 242, 245, 248, 287, 290, 524, 527
BseSI	GKGCMC	2 cut(s)	76, 349
BseXI	GCAGC	2 cut(s)	784, 1115
BsgI	GTGCAG	1 cut(s)	1208
Bsh1236I	CGCG	1 cut(s)	399
BshNI	GGYRCC	3 cut(s)	401, 533, 970
BsiHKCI	CYCGRG	4 cut(s)	69, 151, 437, 506
BslFI	GGGAC	2 cut(s)	308, 488
BslI	CCNNNNNNNGG	6 cut(s)	157, 342, 511, 689, 1071, 1187
BsmAI	GTCTC	3 cut(s)	181, 556, 1159
BsmBI	CGTCTC	2 cut(s)	181, 556
BsmFI	GGGAC	2 cut(s)	308, 488
BsmI	GAATGC	2 cut(s)	799, 1176
BsoBI	CYCGRG	4 cut(s)	69, 151, 437, 506
Bsp120I	GGGCCC	2 cut(s)	72, 345
Bsp1286I	GDGCHC	4 cut(s)	76, 158, 336, 349
Bsp13I	TCCGGA	1 cut(s)	132
Bsp143I	GATC	5 cut(s)	135, 516, 640, 660, 1319
Bsp19I	CCATGG	3 cut(s)	688, 717, 1070
BspCNI	CTCAG	4 cut(s)	781, 880, 886, 952
BspEI	TCCGGA	1 cut(s)	132
BspFNI	CGCG	1 cut(s)	399
BspHI	TCATGA	1 cut(s)	1161
BspLI	GGNNCC	7 cut(s)	74, 274, 347, 403, 535, 972, 1015
BspPI	GGATC	2 cut(s)	143, 1327
BspQI	GCTCTTC	1 cut(s)	728
BspT107I	GGYRCC	3 cut(s)	401, 533, 970
BsrI	ACTGG	1 cut(s)	430
BssMI	GATC	5 cut(s)	135, 516, 640, 660, 1319
BssNI	GRCGYC	4 cut(s)	402, 534, 647, 971
BssT1I	CCWWGG	3 cut(s)	688, 717, 1070
Bst2UI	CCWGG	3 cut(s)	194, 265, 407
Bst4CI	ACNGT	3 cut(s)	487, 928, 1158
Bst6I	CTCTTC	1 cut(s)	728
BstACI	GRCGYC	4 cut(s)	402, 534, 647, 971
BstBAI	YACGTR	1 cut(s)	493
BstC8I	GCNNGC	3 cut(s)	397, 607, 1092
BstDEI	CTNAG	4 cut(s)	768, 888, 894, 960
BstDSI	CCRYGG	5 cut(s)	397, 650, 688, 717, 1070
BstF5I	GGATG	3 cut(s)	426, 444, 684
BstFNI	CGCG	1 cut(s)	399
BstH2I	RGCGCY	3 cut(s)	405, 537, 974
BstHHI	GCGC	3 cut(s)	404, 536, 973
BstKTI	GATC	5 cut(s)	138, 519, 643, 663, 1322
BstMAI	GTCTC	3 cut(s)	181, 556, 1159
BstMBI	GATC	5 cut(s)	135, 516, 640, 660, 1319
BstMWI	GCNNNNNNNGC	7 cut(s)	71, 401, 531, 545, 794, 977, 1100
BstNI	CCWGG	3 cut(s)	194, 265, 407
BstNSI	RCATGY	1 cut(s)	880
BstPAI	GACNNNNGTC	1 cut(s)	597
BstSLI	GKGCMC	2 cut(s)	76, 349
BstUI	CGCG	1 cut(s)	399
BstV1I	GCAGC	2 cut(s)	784, 1115
BstV2I	GAAGAC	1 cut(s)	622
BtgI	CCRYGG	5 cut(s)	397, 650, 688, 717, 1070
BtgZI	GCGATG	5 cut(s)	46, 406, 630, 873, 884
BtsCI	GGATG	3 cut(s)	426, 444, 684
BtsIMutI	CAGTG	2 cut(s)	1146, 1300
Cac8I	GCNNGC	3 cut(s)	397, 607, 1092
CaiI	CAGNNNCTG	1 cut(s)	1106
CciI	TCATGA	1 cut(s)	1161
CfoI	GCGC	3 cut(s)	404, 536, 973
Cfr13I	GGNCC	8 cut(s)	72, 73, 145, 267, 345, 346, 364, 1013
Cfr42I	CCGCGG	1 cut(s)	400
Cfr9I	CCCGGG	1 cut(s)	69
CseI	GACGC	1 cut(s)	655
Csp6I	GTAC	1 cut(s)	433
CviAII	CATG	5 cut(s)	689, 718, 877, 1071, 1162
CviQI	GTAC	1 cut(s)	433
DdeI	CTNAG	4 cut(s)	768, 888, 894, 960
DinI	GGCGCC	3 cut(s)	403, 535, 972
DpnI	GATC	5 cut(s)	137, 518, 642, 662, 1321
DpnII	GATC	5 cut(s)	135, 516, 640, 660, 1319
DrdI	GACNNNNNNGTC	1 cut(s)	107
DseDI	GACNNNNNNGTC	1 cut(s)	107
EaeI	YGGCCR	1 cut(s)	685
Eam1104I	CTCTTC	1 cut(s)	728
EarI	CTCTTC	1 cut(s)	728
EciI	GGCGGA	1 cut(s)	909
Eco130I	CCWWGG	3 cut(s)	688, 717, 1070
Eco24I	GRGCYC	4 cut(s)	76, 158, 336, 349
Eco47I	GGWCC	1 cut(s)	1013
Eco57I	CTGAAG	1 cut(s)	593
Eco72I	CACGTG	1 cut(s)	493
Eco88I	CYCGRG	4 cut(s)	69, 151, 437, 506
EcoO109I	RGGNCCY	1 cut(s)	1013
EcoRI	GAATTC	1 cut(s)	915
EcoRII	CCWGG	3 cut(s)	192, 263, 405
EcoT14I	CCWWGG	3 cut(s)	688, 717, 1070
EcoT38I	GRGCYC	4 cut(s)	76, 158, 336, 349
EgeI	GGCGCC	3 cut(s)	403, 535, 972
EheI	GGCGCC	3 cut(s)	403, 535, 972
ErhI	CCWWGG	3 cut(s)	688, 717, 1070
Esp3I	CGTCTC	2 cut(s)	181, 556
FaeI	CATG	5 cut(s)	692, 721, 880, 1074, 1165
FaqI	GGGAC	2 cut(s)	308, 488
FatI	CATG	5 cut(s)	688, 717, 876, 1070, 1161
FauI	CCCGC	5 cut(s)	122, 227, 334, 360, 404
FblI	GTMKAC	1 cut(s)	930
Fnu4HI	GCNGC	7 cut(s)	171, 400, 462, 523, 537, 798, 1104
FokI	GGATG	3 cut(s)	413, 431, 691
FriOI	GRGCYC	4 cut(s)	76, 158, 336, 349
Fsp4HI	GCNGC	7 cut(s)	171, 400, 462, 523, 537, 798, 1104
FspBI	CTAG	3 cut(s)	696, 981, 1020
GlaI	GCGC	3 cut(s)	403, 535, 972
GluI	GCNGC	7 cut(s)	171, 400, 462, 523, 537, 798, 1104
GsuI	CTGGAG	1 cut(s)	1128
HaeII	RGCGCY	3 cut(s)	405, 537, 974
HgaI	GACGC	1 cut(s)	655
HhaI	GCGC	3 cut(s)	404, 536, 973
Hin1I	GRCGYC	4 cut(s)	402, 534, 647, 971
Hin1II	CATG	5 cut(s)	692, 721, 880, 1074, 1165
Hin6I	GCGC	3 cut(s)	402, 534, 971
HinP1I	GCGC	3 cut(s)	402, 534, 971
HinfI	GANTC	7 cut(s)	17, 200, 317, 622, 724, 1061, 1283
HphI	GGTGA	2 cut(s)	103, 253
Hpy166II	GTNNAC	2 cut(s)	490, 931
Hpy188I	TCNGA	6 cut(s)	277, 556, 645, 729, 808, 889
Hpy188III	TCNNGA	6 cut(s)	14, 121, 133, 696, 1162, 1261
Hpy8I	GTNNAC	2 cut(s)	490, 931
Hpy99I	CGWCG	1 cut(s)	533
HpyAV	CCTTC	7 cut(s)	31, 300, 367, 374, 568, 667, 894
HpyCH4III	ACNGT	3 cut(s)	487, 928, 1158
HpyCH4IV	ACGT	3 cut(s)	492, 501, 1324
HpyCH4V	TGCA	5 cut(s)	420, 880, 1121, 1154, 1225
HpyF10VI	GCNNNNNNNGC	7 cut(s)	71, 401, 531, 545, 794, 977, 1100
HpyF3I	CTNAG	4 cut(s)	768, 888, 894, 960
HpySE526I	ACGT	3 cut(s)	492, 501, 1324
Hsp92I	GRCGYC	4 cut(s)	402, 534, 647, 971
Hsp92II	CATG	5 cut(s)	692, 721, 880, 1074, 1165
HspAI	GCGC	3 cut(s)	402, 534, 971
KasI	GGCGCC	3 cut(s)	401, 533, 970
Kpn2I	TCCGGA	1 cut(s)	132
KspI	CCGCGG	1 cut(s)	400
Kzo9I	GATC	5 cut(s)	135, 516, 640, 660, 1319
LguI	GCTCTTC	1 cut(s)	728
LmnI	GCTCC	3 cut(s)	57, 278, 937
Lsp1109I	GCAGC	2 cut(s)	784, 1115
LweI	GCATC	4 cut(s)	429, 669, 1141, 1278
MaeI	CTAG	3 cut(s)	696, 981, 1020
MaeII	ACGT	3 cut(s)	492, 501, 1324
MaeIII	GTNAC	2 cut(s)	109, 1096
MalI	GATC	5 cut(s)	137, 518, 642, 662, 1321
MboI	GATC	5 cut(s)	135, 516, 640, 660, 1319
MboII	GAAGA	7 cut(s)	19, 22, 28, 31, 382, 622, 745
MhlI	GDGCHC	4 cut(s)	76, 158, 336, 349
MluCI	AATT	4 cut(s)	655, 802, 915, 1002
Mly113I	GGCGCC	3 cut(s)	402, 534, 971
MlyI	GAGTC	3 cut(s)	11, 209, 311
MmeI	TCCRAC	1 cut(s)	300
MroI	TCCGGA	1 cut(s)	132
MseI	TTAA	2 cut(s)	1043, 1244
MspA1I	CMGCKG	2 cut(s)	399, 1106
Mva1269I	GAATGC	2 cut(s)	799, 1176
MvaI	CCWGG	3 cut(s)	194, 265, 407
MvnI	CGCG	1 cut(s)	399
MwoI	GCNNNNNNNGC	7 cut(s)	71, 401, 531, 545, 794, 977, 1100
NarI	GGCGCC	3 cut(s)	402, 534, 971
NciI	CCSGG	9 cut(s)	70, 71, 158, 270, 612, 684, 790, 844, 935
NcoI	CCATGG	3 cut(s)	688, 717, 1070
NdeII	GATC	5 cut(s)	135, 516, 640, 660, 1319
NlaIII	CATG	5 cut(s)	692, 721, 880, 1074, 1165
NlaIV	GGNNCC	7 cut(s)	74, 274, 347, 403, 535, 972, 1015
NmeAIII	GCCGAG	3 cut(s)	223, 341, 355
NmuCI	GTSAC	2 cut(s)	109, 1096
NspI	RCATGY	1 cut(s)	880
PaeR7I	CTCGAG	1 cut(s)	437
PagI	TCATGA	1 cut(s)	1161
PciSI	GCTCTTC	1 cut(s)	728
PcsI	WCGNNNNNNNCGW	3 cut(s)	149, 498, 525
PctI	GAATGC	2 cut(s)	799, 1176
PfeI	GAWTC	4 cut(s)	622, 724, 1061, 1283
PflFI	GACNNNGTC	1 cut(s)	320
PflMI	CCANNNNNTGG	1 cut(s)	1071
PfoI	TCCNGGA	1 cut(s)	842
PkrI	GCNGC	7 cut(s)	172, 401, 463, 524, 538, 799, 1105
PleI	GAGTC	3 cut(s)	11, 208, 311
PluTI	GGCGCC	3 cut(s)	405, 537, 974
PmaCI	CACGTG	1 cut(s)	493
PmlI	CACGTG	1 cut(s)	493
PpsI	GAGTC	3 cut(s)	11, 208, 311
Ppu21I	YACGTR	1 cut(s)	493
PpuMI	RGGWCCY	1 cut(s)	1013
PshAI	GACNNNNGTC	1 cut(s)	597
Psp5II	RGGWCCY	1 cut(s)	1013
Psp6I	CCWGG	3 cut(s)	192, 263, 405
PspCI	CACGTG	1 cut(s)	493
PspGI	CCWGG	3 cut(s)	192, 263, 405
PspN4I	GGNNCC	7 cut(s)	74, 274, 347, 403, 535, 972, 1015
PspOMI	GGGCCC	2 cut(s)	72, 345
PspPI	GGNCC	8 cut(s)	72, 73, 145, 267, 345, 346, 364, 1013
PspPPI	RGGWCCY	1 cut(s)	1013
PspXI	VCTCGAGB	1 cut(s)	437
PsrI	GAACNNNNNNTAC	2 cut(s)	977, 1009
PstNI	CAGNNNCTG	1 cut(s)	1106
PsyI	GACNNNGTC	1 cut(s)	320
PvuII	CAGCTG	1 cut(s)	1106
RsaI	GTAC	1 cut(s)	434
RsaNI	GTAC	1 cut(s)	433
SacII	CCGCGG	1 cut(s)	400
SapI	GCTCTTC	1 cut(s)	728
SaqAI	TTAA	2 cut(s)	1043, 1244
SatI	GCNGC	7 cut(s)	171, 400, 462, 523, 537, 798, 1104
Sau3AI	GATC	5 cut(s)	135, 516, 640, 660, 1319
Sau96I	GGNCC	8 cut(s)	72, 73, 145, 267, 345, 346, 364, 1013
SchI	GAGTC	3 cut(s)	11, 209, 311
SduI	GDGCHC	4 cut(s)	76, 158, 336, 349
SfaNI	GCATC	4 cut(s)	429, 669, 1141, 1278
SfoI	GGCGCC	3 cut(s)	403, 535, 972
Sfr274I	CTCGAG	1 cut(s)	437
Sfr303I	CCGCGG	1 cut(s)	400
SgrBI	CCGCGG	1 cut(s)	400
SinI	GGWCC	1 cut(s)	1013
SlaI	CTCGAG	1 cut(s)	437
SmaI	CCCGGG	1 cut(s)	71
SmlI	CTYRAG	1 cut(s)	437
SmoI	CTYRAG	1 cut(s)	437
Sse9I	AATT	4 cut(s)	655, 802, 915, 1002
SspDI	GGCGCC	3 cut(s)	401, 533, 970
SspMI	CTAG	3 cut(s)	696, 981, 1020
StyI	CCWWGG	3 cut(s)	688, 717, 1070
TaaI	ACNGT	3 cut(s)	487, 928, 1158
TaiI	ACGT	3 cut(s)	495, 504, 1327
TaqI	TCGA	5 cut(s)	315, 438, 528, 705, 774
TaqII	GACCGA	1 cut(s)	808
TasI	AATT	4 cut(s)	655, 802, 915, 1002
TauI	GCSGC	5 cut(s)	173, 402, 464, 525, 539
TfiI	GAWTC	4 cut(s)	622, 724, 1061, 1283
Tru1I	TTAA	2 cut(s)	1043, 1244
Tru9I	TTAA	2 cut(s)	1043, 1244
TscAI	CASTG	2 cut(s)	1153, 1300
TseFI	GTSAC	2 cut(s)	109, 1096
TseI	GCWGC	2 cut(s)	797, 1103
Tsp45I	GTSAC	2 cut(s)	109, 1096
TspDTI	ATGAA	6 cut(s)	13, 22, 746, 887, 1150, 1296
TspGWI	ACGGA	1 cut(s)	310
TspMI	CCCGGG	1 cut(s)	69
TspRI	CASTG	2 cut(s)	1153, 1300
Tth111I	GACNNNGTC	1 cut(s)	320
Van91I	CCANNNNNTGG	1 cut(s)	1071
VpaK11BI	GGWCC	1 cut(s)	1013
XapI	RAATTY	2 cut(s)	655, 915
XbaI	TCTAGA	1 cut(s)	695
XceI	RCATGY	1 cut(s)	880
XhoI	CTCGAG	1 cut(s)	437
XmaI	CCCGGG	1 cut(s)	69
XmiI	GTMKAC	1 cut(s)	930
XspI	CTAG	3 cut(s)	696, 981, 1020

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.