DNA polymerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G64420 |
| fragaria_vesca | FvH4_2g11160 |
| malus_domestica | MD05G1049800.v1.1 MD10G1056900.v1.1 |
| prunus_persica | Prupe.8G075100_v2.0.a1 |
| pyrus_communis | pycom05g04160 pycom05g04170 pycom10g04380 |
| rosa_chinensis | RchiOBHm_Chr6g0269481 |
| rosa_laevigata | RLG00000013848 RLG00000013849 |
| rosa_multiflora | Rmu_ssc0000291.1_g000033 |
| rosa_roxburghii | Rroxscaffold_7G00198700 |
| rosa_rugosa | Rorug06G0048500 |
| rosa_samantha | Rh6AG168400 Rh6BG173800 Rh6CG168000 Rh6CG168100 Rh6DG160000 Rh6DG160100 |
| rosa_wichuraiana | Rw6G014500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2110 |
| Acc36I | ACCTGC | 3 cut(s) | 1885, 1984, 2346 |
| AccII | CGCG | 1 cut(s) | 2400 |
| AccIII | TCCGGA | 1 cut(s) | 2217 |
| AclWI | GGATC | 4 cut(s) | 306, 684, 697, 2249 |
| AcoI | YGGCCR | 2 cut(s) | 1349, 2956 |
| AcuI | CTGAAG | 6 cut(s) | 591, 988, 1071, 1332, 2702, 3081 |
| AcvI | CACGTG | 1 cut(s) | 1442 |
| AdeI | CACNNNGTG | 1 cut(s) | 1509 |
| AfaI | GTAC | 3 cut(s) | 208, 822, 3066 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 2500, 2831 |
| AflII | CTTAAG | 1 cut(s) | 3107 |
| AflIII | ACRYGT | 1 cut(s) | 1050 |
| AhlI | ACTAGT | 1 cut(s) | 404 |
| AjnI | CCWGG | 5 cut(s) | 2350, 2498, 2624, 2742, 2958 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 26, 58, 3156, 3188 |
| AleI | CACNNNNGTG | 1 cut(s) | 1313 |
| Alw21I | GWGCWC | 2 cut(s) | 334, 1375 |
| Alw26I | GTCTC | 1 cut(s) | 2066 |
| AlwI | GGATC | 4 cut(s) | 306, 684, 697, 2249 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1408, 2714 |
| Ama87I | CYCGRG | 2 cut(s) | 1460, 2935 |
| Aor13HI | TCCGGA | 1 cut(s) | 2217 |
| AoxI | GGCC | 7 cut(s) | 72, 524, 726, 1349, 2118, 2822, 2956 |
| ApeKI | GCWGC | 9 cut(s) | 216, 1358, 1396, 1629, 1675, 1855, 1939, 2591, 2719 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2989, 3021 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 913, 1052, 1706, 2031 |
| AspLEI | GCGC | 2 cut(s) | 106, 2402 |
| AspS9I | GGNCC | 2 cut(s) | 1436, 2491 |
| AsuC2I | CCSGG | 2 cut(s) | 2936, 2937 |
| AsuHPI | GGTGA | 8 cut(s) | 688, 1814, 2090, 2099, 2285, 2516, 2926, 3188 |
| AvaI | CYCGRG | 2 cut(s) | 1460, 2935 |
| AvaII | GGWCC | 2 cut(s) | 1436, 2491 |
| BalI | TGGCCA | 1 cut(s) | 1351 |
| BamHI | GGATCC | 1 cut(s) | 689 |
| BbrPI | CACGTG | 1 cut(s) | 1442 |
| BbsI | GAAGAC | 5 cut(s) | 355, 401, 1143, 1794, 2010 |
| Bbv12I | GWGCWC | 2 cut(s) | 334, 1375 |
| BbvCI | CCTCAGC | 1 cut(s) | 357 |
| BbvI | GCAGC | 9 cut(s) | 228, 1370, 1408, 1641, 1662, 1842, 1926, 2578, 2706 |
| BceAI | ACGGC | 2 cut(s) | 91, 2809 |
| BciT130I | CCWGG | 5 cut(s) | 2352, 2500, 2626, 2744, 2960 |
| BciVI | GTATCC | 3 cut(s) | 1540, 1831, 2218 |
| BclI | TGATCA | 2 cut(s) | 1765, 3178 |
| BcnI | CCSGG | 2 cut(s) | 2936, 2937 |
| BcoDI | GTCTC | 1 cut(s) | 2066 |
| BcuI | ACTAGT | 1 cut(s) | 404 |
| BfaI | CTAG | 9 cut(s) | 353, 405, 533, 627, 1226, 1274, 1980, 2327, 2528 |
| BfmI | CTRYAG | 4 cut(s) | 932, 1815, 2421, 2720 |
| BfrI | CTTAAG | 1 cut(s) | 3107 |
| BfuAI | ACCTGC | 3 cut(s) | 1885, 1984, 2346 |
| BfuI | GTATCC | 3 cut(s) | 1540, 1831, 2218 |
| BglII | AGATCT | 1 cut(s) | 3084 |
| BlpI | GCTNAGC | 2 cut(s) | 1625, 3113 |
| Bme1390I | CCNGG | 7 cut(s) | 2352, 2500, 2626, 2744, 2936, 2937, 2960 |
| Bme18I | GGWCC | 2 cut(s) | 1436, 2491 |
| BmeT110I | CYCGRG | 2 cut(s) | 1460, 2935 |
| BmgT120I | GGNCC | 2 cut(s) | 1436, 2491 |
| BmiI | GGNNCC | 2 cut(s) | 691, 2630 |
| BmrFI | CCNGG | 7 cut(s) | 2352, 2500, 2626, 2744, 2936, 2937, 2960 |
| BmsI | GCATC | 9 cut(s) | 228, 434, 565, 826, 1307, 1981, 2197, 2683, 3136 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1462, 2889 |
| BpiI | GAAGAC | 5 cut(s) | 355, 401, 1143, 1794, 2010 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 106, 138, 2108, 2140 |
| BpmI | CTGGAG | 2 cut(s) | 1385, 3126 |
| Bpu10I | CCTNAGC | 1 cut(s) | 357 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1625, 3113 |
| BpuEI | CTTGAG | 4 cut(s) | 50, 830, 1351, 3113 |
| BpuMI | CCSGG | 2 cut(s) | 2936, 2937 |
| BsaAI | YACGTR | 1 cut(s) | 1442 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2229 |
| BsaWI | WCCGGW | 1 cut(s) | 2217 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1130, 1160 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 2500, 2831 |
| Bse1I | ACTGG | 3 cut(s) | 661, 1402, 2080 |
| Bse3DI | GCAATG | 7 cut(s) | 233, 952, 1149, 1161, 1841, 1850, 2217 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2229 |
| BseAI | TCCGGA | 1 cut(s) | 2217 |
| BseBI | CCWGG | 5 cut(s) | 2352, 2500, 2626, 2744, 2960 |
| BseJI | GATNNNNATC | 1 cut(s) | 2229 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 2500, 2831 |
| BseMI | GCAATG | 7 cut(s) | 233, 952, 1149, 1161, 1841, 1850, 2217 |
| BseMII | CTCAG | 8 cut(s) | 348, 1110, 1436, 1716, 2061, 2118, 2706, 3104 |
| BseNI | ACTGG | 3 cut(s) | 661, 1402, 2080 |
| BseRI | GAGGAG | 2 cut(s) | 374, 622 |
| BseXI | GCAGC | 9 cut(s) | 228, 1370, 1408, 1641, 1662, 1842, 1926, 2578, 2706 |
| BseYI | CCCAGC | 1 cut(s) | 2267 |
| BsgI | GTGCAG | 1 cut(s) | 29 |
| Bsh1236I | CGCG | 1 cut(s) | 2400 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1700 |
| BshFI | GGCC | 7 cut(s) | 74, 526, 728, 1351, 2120, 2824, 2958 |
| BsiEI | CGRYCG | 1 cut(s) | 1700 |
| BsiHKAI | GWGCWC | 2 cut(s) | 334, 1375 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1460, 2935 |
| BsiSI | CCGG | 2 cut(s) | 2218, 2936 |
| BslFI | GGGAC | 2 cut(s) | 2764, 2917 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 2500, 2831 |
| BsmAI | GTCTC | 1 cut(s) | 2066 |
| BsmFI | GGGAC | 2 cut(s) | 2764, 2917 |
| BsmI | GAATGC | 1 cut(s) | 510 |
| BsnI | GGCC | 7 cut(s) | 74, 526, 728, 1351, 2120, 2824, 2958 |
| BsoBI | CYCGRG | 2 cut(s) | 1460, 2935 |
| Bsp1286I | GDGCHC | 2 cut(s) | 334, 1375 |
| Bsp13I | TCCGGA | 1 cut(s) | 2217 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1625, 3113 |
| Bsp19I | CCATGG | 1 cut(s) | 2157 |
| BspANI | GGCC | 7 cut(s) | 74, 526, 728, 1351, 2120, 2824, 2958 |
| BspCNI | CTCAG | 8 cut(s) | 349, 1111, 1435, 1717, 2062, 2119, 2707, 3105 |
| BspEI | TCCGGA | 1 cut(s) | 2217 |
| BspFNI | CGCG | 1 cut(s) | 2400 |
| BspLI | GGNNCC | 2 cut(s) | 691, 2630 |
| BspMAI | CTGCAG | 3 cut(s) | 1819, 2425, 2724 |
| BspMI | ACCTGC | 3 cut(s) | 1885, 1984, 2346 |
| BspPI | GGATC | 4 cut(s) | 306, 684, 697, 2249 |
| BspTI | CTTAAG | 1 cut(s) | 3107 |
| BsrDI | GCAATG | 7 cut(s) | 233, 952, 1149, 1161, 1841, 1850, 2217 |
| BsrI | ACTGG | 3 cut(s) | 661, 1402, 2080 |
| BssT1I | CCWWGG | 1 cut(s) | 2157 |
| Bst2UI | CCWGG | 5 cut(s) | 2352, 2500, 2626, 2744, 2960 |
| Bst4CI | ACNGT | 5 cut(s) | 101, 982, 1410, 1863, 2093 |
| Bst6I | CTCTTC | 1 cut(s) | 428 |
| BstAFI | CTTAAG | 1 cut(s) | 3107 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1509, 2296 |
| BstBAI | YACGTR | 1 cut(s) | 1442 |
| BstC8I | GCNNGC | 6 cut(s) | 453, 567, 765, 1581, 1650, 2398 |
| BstDSI | CCRYGG | 2 cut(s) | 2157, 2825 |
| BstFNI | CGCG | 1 cut(s) | 2400 |
| BstHHI | GCGC | 2 cut(s) | 106, 2402 |
| BstMAI | GTCTC | 1 cut(s) | 2066 |
| BstMCI | CGRYCG | 1 cut(s) | 1700 |
| BstNI | CCWGG | 5 cut(s) | 2352, 2500, 2626, 2744, 2960 |
| BstNSI | RCATGY | 2 cut(s) | 1054, 1652 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1462, 2889 |
| BstSCI | CCNGG | 7 cut(s) | 2350, 2498, 2624, 2742, 2934, 2935, 2958 |
| BstSFI | CTRYAG | 4 cut(s) | 932, 1815, 2421, 2720 |
| BstUI | CGCG | 1 cut(s) | 2400 |
| BstV1I | GCAGC | 9 cut(s) | 228, 1370, 1408, 1641, 1662, 1842, 1926, 2578, 2706 |
| BstV2I | GAAGAC | 5 cut(s) | 355, 401, 1143, 1794, 2010 |
| BstX2I | RGATCY | 3 cut(s) | 689, 2241, 3084 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1156 |
| BstYI | RGATCY | 3 cut(s) | 689, 2241, 3084 |
| BsuI | GTATCC | 3 cut(s) | 1540, 1831, 2218 |
| BsuRI | GGCC | 7 cut(s) | 74, 526, 728, 1351, 2120, 2824, 2958 |
| BtgI | CCRYGG | 2 cut(s) | 2157, 2825 |
| BtgZI | GCGATG | 1 cut(s) | 1598 |
| BtsI | GCAGTG | 2 cut(s) | 1293, 2277 |
| BtsIMutI | CAGTG | 7 cut(s) | 578, 668, 812, 1293, 1308, 2098, 2277 |
| BveI | ACCTGC | 3 cut(s) | 1885, 1984, 2346 |
| Cac8I | GCNNGC | 6 cut(s) | 453, 567, 765, 1581, 1650, 2398 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1408, 2714 |
| CfoI | GCGC | 2 cut(s) | 106, 2402 |
| Cfr13I | GGNCC | 2 cut(s) | 1436, 2491 |
| Cfr9I | CCCGGG | 1 cut(s) | 2935 |
| CseI | GACGC | 2 cut(s) | 1817, 2180 |
| Csp6I | GTAC | 3 cut(s) | 207, 821, 3065 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1428, 1463, 2355, 2390 |
| CviAII | CATG | 9 cut(s) | 710, 811, 1051, 1182, 1649, 1769, 2158, 2296, 2342 |
| CviQI | GTAC | 3 cut(s) | 207, 821, 3065 |
| DraI | TTTAAA | 3 cut(s) | 1221, 1903, 2482 |
| DraIII | CACNNNGTG | 1 cut(s) | 1509 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2110 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2110 |
| EaeI | YGGCCR | 2 cut(s) | 1349, 2956 |
| Eam1104I | CTCTTC | 1 cut(s) | 428 |
| EarI | CTCTTC | 1 cut(s) | 428 |
| Eco130I | CCWWGG | 1 cut(s) | 2157 |
| Eco47I | GGWCC | 2 cut(s) | 1436, 2491 |
| Eco57I | CTGAAG | 6 cut(s) | 591, 988, 1071, 1332, 2702, 3081 |
| Eco72I | CACGTG | 1 cut(s) | 1442 |
| Eco88I | CYCGRG | 2 cut(s) | 1460, 2935 |
| EcoRI | GAATTC | 3 cut(s) | 398, 1706, 2460 |
| EcoRII | CCWGG | 5 cut(s) | 2350, 2498, 2624, 2742, 2958 |
| EcoT14I | CCWWGG | 1 cut(s) | 2157 |
| ErhI | CCWWGG | 1 cut(s) | 2157 |
| FaeI | CATG | 9 cut(s) | 713, 814, 1054, 1185, 1652, 1772, 2161, 2299, 2345 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 425, 457, 1057, 1089, 2019, 2051, 2870, 2902 |
| FaqI | GGGAC | 2 cut(s) | 2764, 2917 |
| FatI | CATG | 9 cut(s) | 709, 810, 1050, 1181, 1648, 1768, 2157, 2295, 2341 |
| FauI | CCCGC | 1 cut(s) | 3071 |
| FbaI | TGATCA | 2 cut(s) | 1765, 3178 |
| FspBI | CTAG | 9 cut(s) | 353, 405, 533, 627, 1226, 1274, 1980, 2327, 2528 |
| GlaI | GCGC | 2 cut(s) | 105, 2401 |
| GsaI | CCCAGC | 1 cut(s) | 2271 |
| GsuI | CTGGAG | 2 cut(s) | 1385, 3126 |
| HaeIII | GGCC | 7 cut(s) | 74, 526, 728, 1351, 2120, 2824, 2958 |
| HapII | CCGG | 2 cut(s) | 2218, 2936 |
| HgaI | GACGC | 2 cut(s) | 1817, 2180 |
| HhaI | GCGC | 2 cut(s) | 106, 2402 |
| Hin1II | CATG | 9 cut(s) | 713, 814, 1054, 1185, 1652, 1772, 2161, 2299, 2345 |
| Hin6I | GCGC | 2 cut(s) | 104, 2400 |
| HinP1I | GCGC | 2 cut(s) | 104, 2400 |
| HincII | GTYRAC | 1 cut(s) | 1918 |
| HindII | GTYRAC | 1 cut(s) | 1918 |
| HindIII | AAGCTT | 3 cut(s) | 1071, 2306, 2964 |
| HpaII | CCGG | 2 cut(s) | 2218, 2936 |
| HphI | GGTGA | 8 cut(s) | 688, 1814, 2090, 2099, 2285, 2516, 2926, 3188 |
| Hpy166II | GTNNAC | 6 cut(s) | 229, 1293, 1439, 1918, 2383, 2435 |
| Hpy8I | GTNNAC | 6 cut(s) | 229, 1293, 1439, 1918, 2383, 2435 |
| Hpy99I | CGWCG | 2 cut(s) | 112, 2895 |
| HpyCH4III | ACNGT | 5 cut(s) | 101, 982, 1410, 1863, 2093 |
| HpyCH4IV | ACGT | 1 cut(s) | 1441 |
| HpySE526I | ACGT | 1 cut(s) | 1441 |
| Hsp92II | CATG | 9 cut(s) | 713, 814, 1054, 1185, 1652, 1772, 2161, 2299, 2345 |
| HspAI | GCGC | 2 cut(s) | 104, 2400 |
| Kpn2I | TCCGGA | 1 cut(s) | 2217 |
| Ksp22I | TGATCA | 2 cut(s) | 1765, 3178 |
| LmnI | GCTCC | 8 cut(s) | 289, 635, 1404, 1695, 1816, 1876, 2066, 3145 |
| Lsp1109I | GCAGC | 9 cut(s) | 228, 1370, 1408, 1641, 1662, 1842, 1926, 2578, 2706 |
| LweI | GCATC | 9 cut(s) | 228, 434, 565, 826, 1307, 1981, 2197, 2683, 3136 |
| MaeI | CTAG | 9 cut(s) | 353, 405, 533, 627, 1226, 1274, 1980, 2327, 2528 |
| MaeII | ACGT | 1 cut(s) | 1441 |
| MaeIII | GTNAC | 5 cut(s) | 265, 1315, 1404, 2087, 2273 |
| MfeI | CAATTG | 1 cut(s) | 3020 |
| MflI | RGATCY | 3 cut(s) | 689, 2241, 3084 |
| MhlI | GDGCHC | 2 cut(s) | 334, 1375 |
| MlsI | TGGCCA | 1 cut(s) | 1351 |
| MluNI | TGGCCA | 1 cut(s) | 1351 |
| MlyI | GAGTC | 8 cut(s) | 69, 224, 1139, 1452, 1472, 2117, 2120, 2720 |
| MmeI | TCCRAC | 2 cut(s) | 48, 851 |
| Mox20I | TGGCCA | 1 cut(s) | 1351 |
| MroI | TCCGGA | 1 cut(s) | 2217 |
| MroXI | GAANNNNTTC | 4 cut(s) | 913, 1052, 1706, 2031 |
| MscI | TGGCCA | 1 cut(s) | 1351 |
| MslI | CAYNNNNRTG | 6 cut(s) | 224, 945, 1055, 1154, 1313, 1989 |
| Msp20I | TGGCCA | 1 cut(s) | 1351 |
| MspA1I | CMGCKG | 1 cut(s) | 1675 |
| MspCI | CTTAAG | 1 cut(s) | 3107 |
| MspI | CCGG | 2 cut(s) | 2218, 2936 |
| MspR9I | CCNGG | 7 cut(s) | 2352, 2500, 2626, 2744, 2936, 2937, 2960 |
| MunI | CAATTG | 1 cut(s) | 3020 |
| Mva1269I | GAATGC | 1 cut(s) | 510 |
| MvaI | CCWGG | 5 cut(s) | 2352, 2500, 2626, 2744, 2960 |
| MvnI | CGCG | 1 cut(s) | 2400 |
| NciI | CCSGG | 2 cut(s) | 2936, 2937 |
| NcoI | CCATGG | 1 cut(s) | 2157 |
| NlaIII | CATG | 9 cut(s) | 713, 814, 1054, 1185, 1652, 1772, 2161, 2299, 2345 |
| NlaIV | GGNNCC | 2 cut(s) | 691, 2630 |
| NmeAIII | GCCGAG | 1 cut(s) | 100 |
| NmuCI | GTSAC | 4 cut(s) | 265, 1315, 2087, 2273 |
| NspI | RCATGY | 2 cut(s) | 1054, 1652 |
| OliI | CACNNNNGTG | 1 cut(s) | 1313 |
| PaeI | GCATGC | 1 cut(s) | 1652 |
| PaeR7I | CTCGAG | 1 cut(s) | 1460 |
| PasI | CCCWGGG | 1 cut(s) | 2499 |
| PciI | ACATGT | 1 cut(s) | 1050 |
| PctI | GAATGC | 1 cut(s) | 510 |
| PdmI | GAANNNNTTC | 4 cut(s) | 913, 1052, 1706, 2031 |
| PfoI | TCCNGGA | 1 cut(s) | 2624 |
| PleI | GAGTC | 8 cut(s) | 68, 224, 1139, 1452, 1471, 2117, 2119, 2719 |
| PmaCI | CACGTG | 1 cut(s) | 1442 |
| PmlI | CACGTG | 1 cut(s) | 1442 |
| PpsI | GAGTC | 8 cut(s) | 68, 224, 1139, 1452, 1471, 2117, 2119, 2719 |
| Ppu21I | YACGTR | 1 cut(s) | 1442 |
| PscI | ACATGT | 1 cut(s) | 1050 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1462, 2889 |
| Psp6I | CCWGG | 5 cut(s) | 2350, 2498, 2624, 2742, 2958 |
| PspCI | CACGTG | 1 cut(s) | 1442 |
| PspFI | CCCAGC | 1 cut(s) | 2267 |
| PspGI | CCWGG | 5 cut(s) | 2350, 2498, 2624, 2742, 2958 |
| PspN4I | GGNNCC | 2 cut(s) | 691, 2630 |
| PspPI | GGNCC | 2 cut(s) | 1436, 2491 |
| PspXI | VCTCGAGB | 1 cut(s) | 1460 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1812, 1844 |
| PstI | CTGCAG | 3 cut(s) | 1819, 2425, 2724 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1408, 2714 |
| PsuI | RGATCY | 3 cut(s) | 689, 2241, 3084 |
| PvuII | CAGCTG | 1 cut(s) | 1675 |
| RsaI | GTAC | 3 cut(s) | 208, 822, 3066 |
| RsaNI | GTAC | 3 cut(s) | 207, 821, 3065 |
| RseI | CAYNNNNRTG | 6 cut(s) | 224, 945, 1055, 1154, 1313, 1989 |
| Sau96I | GGNCC | 2 cut(s) | 1436, 2491 |
| SchI | GAGTC | 8 cut(s) | 69, 224, 1139, 1452, 1472, 2117, 2120, 2720 |
| ScrFI | CCNGG | 7 cut(s) | 2352, 2500, 2626, 2744, 2936, 2937, 2960 |
| SduI | GDGCHC | 2 cut(s) | 334, 1375 |
| SfaNI | GCATC | 9 cut(s) | 228, 434, 565, 826, 1307, 1981, 2197, 2683, 3136 |
| SfcI | CTRYAG | 4 cut(s) | 932, 1815, 2421, 2720 |
| Sfr274I | CTCGAG | 1 cut(s) | 1460 |
| SinI | GGWCC | 2 cut(s) | 1436, 2491 |
| SlaI | CTCGAG | 1 cut(s) | 1460 |
| SmaI | CCCGGG | 1 cut(s) | 2937 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 224, 945, 1055, 1154, 1313, 1989 |
| SmlI | CTYRAG | 6 cut(s) | 29, 845, 1366, 1460, 3107, 3128 |
| SmoI | CTYRAG | 6 cut(s) | 29, 845, 1366, 1460, 3107, 3128 |
| SpeI | ACTAGT | 1 cut(s) | 404 |
| SphI | GCATGC | 1 cut(s) | 1652 |
| SspI | AATATT | 5 cut(s) | 541, 2478, 2762, 2811, 2925 |
| SspMI | CTAG | 9 cut(s) | 353, 405, 533, 627, 1226, 1274, 1980, 2327, 2528 |
| StyD4I | CCNGG | 7 cut(s) | 2350, 2498, 2624, 2742, 2934, 2935, 2958 |
| StyI | CCWWGG | 1 cut(s) | 2157 |
| TaaI | ACNGT | 5 cut(s) | 101, 982, 1410, 1863, 2093 |
| TaiI | ACGT | 1 cut(s) | 1444 |
| TaqI | TCGA | 9 cut(s) | 155, 1456, 1461, 1537, 1696, 2311, 2757, 2893, 2907 |
| TaqII | GACCGA | 1 cut(s) | 1714 |
| TatI | WGTACW | 1 cut(s) | 820 |
| TauI | GCSGC | 1 cut(s) | 2958 |
| TscAI | CASTG | 7 cut(s) | 585, 668, 812, 1300, 1315, 2098, 2284 |
| TseFI | GTSAC | 4 cut(s) | 265, 1315, 2087, 2273 |
| TseI | GCWGC | 9 cut(s) | 216, 1358, 1396, 1629, 1675, 1855, 1939, 2591, 2719 |
| Tsp45I | GTSAC | 4 cut(s) | 265, 1315, 2087, 2273 |
| TspGWI | ACGGA | 4 cut(s) | 1940, 2205, 2254, 3082 |
| TspMI | CCCGGG | 1 cut(s) | 2935 |
| TspRI | CASTG | 7 cut(s) | 585, 668, 812, 1300, 1315, 2098, 2284 |
| Vha464I | CTTAAG | 1 cut(s) | 3107 |
| VpaK11BI | GGWCC | 2 cut(s) | 1436, 2491 |
| XbaI | TCTAGA | 1 cut(s) | 2527 |
| XceI | RCATGY | 2 cut(s) | 1054, 1652 |
| XhoI | CTCGAG | 1 cut(s) | 1460 |
| XmaI | CCCGGG | 1 cut(s) | 2935 |
| XmnI | GAANNNNTTC | 4 cut(s) | 913, 1052, 1706, 2031 |
| XspI | CTAG | 9 cut(s) | 353, 405, 533, 627, 1226, 1274, 1980, 2327, 2528 |