TMV resistance protein N-like
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom07g22040 |
| rosa_chinensis | RchiOBHm_Chr1g0323671 RchiOBHm_Chr6g0250671 RchiOBHm_Chr6g0250861 RchiOBHm_Chr6g0268381 |
| rosa_laevigata | RLG00000014455 RLG00000015492 RLG00000015493 RLG00000015519 RLG00000015529 RLG00000030319 RLG00000030321 |
| rosa_multiflora | Rmu_sc0041838.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00207710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 77, 167, 301 |
| AclWI | GGATC | 2 cut(s) | 23, 36 |
| AcoI | YGGCCR | 1 cut(s) | 8 |
| AcsI | RAATTY | 1 cut(s) | 142 |
| AgsI | TTSAA | 4 cut(s) | 97, 176, 253, 335 |
| AluBI | AGCT | 3 cut(s) | 125, 293, 316 |
| AluI | AGCT | 3 cut(s) | 125, 293, 316 |
| AlwI | GGATC | 2 cut(s) | 23, 36 |
| AoxI | GGCC | 2 cut(s) | 8, 88 |
| ApoI | RAATTY | 1 cut(s) | 142 |
| AspLEI | GCGC | 1 cut(s) | 346 |
| AspS9I | GGNCC | 1 cut(s) | 88 |
| AsuC2I | CCSGG | 2 cut(s) | 151, 164 |
| AsuHPI | GGTGA | 2 cut(s) | 77, 380 |
| AsuII | TTCGAA | 1 cut(s) | 131 |
| BamHI | GGATCC | 1 cut(s) | 28 |
| BccI | CCATC | 3 cut(s) | 108, 194, 394 |
| BciVI | GTATCC | 1 cut(s) | 276 |
| BcnI | CCSGG | 2 cut(s) | 151, 164 |
| BfaI | CTAG | 3 cut(s) | 287, 392, 438 |
| BfoI | RGCGCY | 1 cut(s) | 347 |
| BfuI | GTATCC | 1 cut(s) | 276 |
| Bme1390I | CCNGG | 2 cut(s) | 151, 164 |
| BmgT120I | GGNCC | 1 cut(s) | 88 |
| BmiI | GGNNCC | 1 cut(s) | 30 |
| BmrFI | CCNGG | 2 cut(s) | 151, 164 |
| BmsI | GCATC | 1 cut(s) | 468 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 109, 141 |
| Bpu14I | TTCGAA | 1 cut(s) | 131 |
| BpuMI | CCSGG | 2 cut(s) | 151, 164 |
| BsaJI | CCNNGG | 1 cut(s) | 33 |
| Bse1I | ACTGG | 1 cut(s) | 210 |
| Bse3DI | GCAATG | 1 cut(s) | 237 |
| BseDI | CCNNGG | 1 cut(s) | 33 |
| BseGI | GGATG | 2 cut(s) | 405, 474 |
| BseMI | GCAATG | 1 cut(s) | 237 |
| BseNI | ACTGG | 1 cut(s) | 210 |
| BshFI | GGCC | 2 cut(s) | 10, 90 |
| BsiSI | CCGG | 2 cut(s) | 150, 163 |
| BsnI | GGCC | 2 cut(s) | 10, 90 |
| Bsp119I | TTCGAA | 1 cut(s) | 131 |
| Bsp143I | GATC | 1 cut(s) | 28 |
| BspACI | CCGC | 3 cut(s) | 77, 167, 301 |
| BspANI | GGCC | 2 cut(s) | 10, 90 |
| BspLI | GGNNCC | 1 cut(s) | 30 |
| BspPI | GGATC | 2 cut(s) | 23, 36 |
| BspT104I | TTCGAA | 1 cut(s) | 131 |
| BsrDI | GCAATG | 1 cut(s) | 237 |
| BsrI | ACTGG | 1 cut(s) | 210 |
| BssECI | CCNNGG | 1 cut(s) | 33 |
| BssMI | GATC | 1 cut(s) | 28 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 388 |
| BstBI | TTCGAA | 1 cut(s) | 131 |
| BstC8I | GCNNGC | 1 cut(s) | 380 |
| BstDEI | CTNAG | 1 cut(s) | 317 |
| BstF5I | GGATG | 2 cut(s) | 405, 474 |
| BstH2I | RGCGCY | 1 cut(s) | 347 |
| BstHHI | GCGC | 1 cut(s) | 346 |
| BstKTI | GATC | 1 cut(s) | 31 |
| BstMBI | GATC | 1 cut(s) | 28 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 388, 442, 456 |
| BstNSI | RCATGY | 1 cut(s) | 382 |
| BstSCI | CCNGG | 2 cut(s) | 149, 162 |
| BstX2I | RGATCY | 1 cut(s) | 28 |
| BstYI | RGATCY | 1 cut(s) | 28 |
| BsuI | GTATCC | 1 cut(s) | 276 |
| BsuRI | GGCC | 2 cut(s) | 10, 90 |
| BtsCI | GGATG | 2 cut(s) | 405, 474 |
| Cac8I | GCNNGC | 1 cut(s) | 380 |
| CfoI | GCGC | 1 cut(s) | 346 |
| Cfr13I | GGNCC | 1 cut(s) | 88 |
| CviAII | CATG | 3 cut(s) | 83, 379, 383 |
| CviJI | RGCY | 6 cut(s) | 10, 90, 125, 293, 316, 436 |
| CviKI_1 | RGCY | 6 cut(s) | 10, 90, 125, 293, 316, 436 |
| DdeI | CTNAG | 1 cut(s) | 317 |
| DpnI | GATC | 1 cut(s) | 30 |
| DpnII | GATC | 1 cut(s) | 28 |
| EaeI | YGGCCR | 1 cut(s) | 8 |
| EciI | GGCGGA | 1 cut(s) | 182 |
| EcoT22I | ATGCAT | 1 cut(s) | 384 |
| FaeI | CATG | 3 cut(s) | 86, 382, 386 |
| FaiI | YATR | 9 cut(s) | 84, 198, 350, 352, 354, 366, 380, 384, 413 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 216, 248 |
| FatI | CATG | 3 cut(s) | 82, 378, 382 |
| FokI | GGATG | 2 cut(s) | 412, 481 |
| FspBI | CTAG | 3 cut(s) | 287, 392, 438 |
| GlaI | GCGC | 1 cut(s) | 345 |
| HaeII | RGCGCY | 1 cut(s) | 347 |
| HaeIII | GGCC | 2 cut(s) | 10, 90 |
| HapII | CCGG | 2 cut(s) | 150, 163 |
| HhaI | GCGC | 1 cut(s) | 346 |
| Hin1II | CATG | 3 cut(s) | 86, 382, 386 |
| Hin6I | GCGC | 1 cut(s) | 344 |
| HinP1I | GCGC | 1 cut(s) | 344 |
| HindIII | AAGCTT | 2 cut(s) | 291, 314 |
| HinfI | GANTC | 2 cut(s) | 93, 425 |
| HpaII | CCGG | 2 cut(s) | 150, 163 |
| HphI | GGTGA | 2 cut(s) | 77, 380 |
| Hpy188I | TCNGA | 2 cut(s) | 37, 276 |
| Hpy188III | TCNNGA | 2 cut(s) | 97, 332 |
| HpyAV | CCTTC | 1 cut(s) | 389 |
| HpyCH4IV | ACGT | 1 cut(s) | 39 |
| HpyCH4V | TGCA | 3 cut(s) | 378, 382, 474 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 388, 442, 456 |
| HpyF3I | CTNAG | 1 cut(s) | 317 |
| HpySE526I | ACGT | 1 cut(s) | 39 |
| Hsp92II | CATG | 3 cut(s) | 86, 382, 386 |
| HspAI | GCGC | 1 cut(s) | 344 |
| Kzo9I | GATC | 1 cut(s) | 28 |
| LmnI | GCTCC | 1 cut(s) | 79 |
| LpnPI | CCDG | 4 cut(s) | 163, 176, 191, 460 |
| LweI | GCATC | 1 cut(s) | 468 |
| MaeI | CTAG | 3 cut(s) | 287, 392, 438 |
| MaeII | ACGT | 1 cut(s) | 39 |
| MaeIII | GTNAC | 1 cut(s) | 296 |
| MalI | GATC | 1 cut(s) | 30 |
| MboI | GATC | 1 cut(s) | 28 |
| MboII | GAAGA | 3 cut(s) | 221, 241, 347 |
| MflI | RGATCY | 1 cut(s) | 28 |
| MluCI | AATT | 1 cut(s) | 142 |
| MlyI | GAGTC | 1 cut(s) | 434 |
| MmeI | TCCRAC | 1 cut(s) | 239 |
| MnlI | CCTC | 5 cut(s) | 43, 47, 61, 79, 471 |
| Mph1103I | ATGCAT | 1 cut(s) | 384 |
| MseI | TTAA | 2 cut(s) | 110, 324 |
| MslI | CAYNNNNRTG | 1 cut(s) | 467 |
| MspI | CCGG | 2 cut(s) | 150, 163 |
| MspR9I | CCNGG | 2 cut(s) | 151, 164 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 388, 442, 456 |
| NciI | CCSGG | 2 cut(s) | 151, 164 |
| NdeII | GATC | 1 cut(s) | 28 |
| NlaIII | CATG | 3 cut(s) | 86, 382, 386 |
| NlaIV | GGNNCC | 1 cut(s) | 30 |
| NmuCI | GTSAC | 1 cut(s) | 296 |
| NsiI | ATGCAT | 1 cut(s) | 384 |
| NspI | RCATGY | 1 cut(s) | 382 |
| NspV | TTCGAA | 1 cut(s) | 131 |
| PaeI | GCATGC | 1 cut(s) | 382 |
| PfeI | GAWTC | 1 cut(s) | 93 |
| PleI | GAGTC | 1 cut(s) | 433 |
| PpsI | GAGTC | 1 cut(s) | 433 |
| PspN4I | GGNNCC | 1 cut(s) | 30 |
| PspPI | GGNCC | 1 cut(s) | 88 |
| PsuI | RGATCY | 1 cut(s) | 28 |
| RseI | CAYNNNNRTG | 1 cut(s) | 467 |
| SaqAI | TTAA | 2 cut(s) | 110, 324 |
| Sau3AI | GATC | 1 cut(s) | 28 |
| Sau96I | GGNCC | 1 cut(s) | 88 |
| SchI | GAGTC | 1 cut(s) | 434 |
| ScrFI | CCNGG | 2 cut(s) | 151, 164 |
| SetI | ASST | 7 cut(s) | 42, 108, 127, 259, 295, 318, 482 |
| SfaNI | GCATC | 1 cut(s) | 468 |
| SfuI | TTCGAA | 1 cut(s) | 131 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 467 |
| SphI | GCATGC | 1 cut(s) | 382 |
| Sse9I | AATT | 1 cut(s) | 142 |
| SsiI | CCGC | 3 cut(s) | 77, 167, 301 |
| SspI | AATATT | 1 cut(s) | 181 |
| SspMI | CTAG | 3 cut(s) | 287, 392, 438 |
| StyD4I | CCNGG | 2 cut(s) | 149, 162 |
| TaiI | ACGT | 1 cut(s) | 42 |
| TaqI | TCGA | 1 cut(s) | 131 |
| TasI | AATT | 1 cut(s) | 142 |
| TfiI | GAWTC | 1 cut(s) | 93 |
| Tru1I | TTAA | 2 cut(s) | 110, 324 |
| Tru9I | TTAA | 2 cut(s) | 110, 324 |
| TseFI | GTSAC | 1 cut(s) | 296 |
| Tsp45I | GTSAC | 1 cut(s) | 296 |
| TspGWI | ACGGA | 1 cut(s) | 295 |
| XapI | RAATTY | 1 cut(s) | 142 |
| XceI | RCATGY | 1 cut(s) | 382 |
| XspI | CTAG | 3 cut(s) | 287, 392, 438 |
| Zsp2I | ATGCAT | 1 cut(s) | 384 |