Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0008038

Physical Location & Seq

Genomic Coordinates Reverse (-)

21122550 .. 21149487

Gene Structure 26938 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0121800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGCCCAATTTAGTTGAGGACAGAGGTGCGTATGTTCCCAAAACGGGTTTTGGTTTGGATTGTGTGGGAATTGGACAAGTTGAGTTTAGGCCAGATGGTAGTGTTTTGTTGCCCTCTTACTTGGTTCCAGTGGTGTCATTTGTTAGGTTGTGGGTGTGGAAGCCCGATGAGGAGGTGCTGATGGTTTCTAGGCAGTATTTTTGGACTGGAAGATGGTTGTGGGTGTGGAAGCCCGATGAGGAGGTGCTGATGGTTTCTAGGCAGTATTTTTGGACTGGAAGATGTATTTTTGGACTGGAAGATGGTGAGCACATCAAAGTTTGTGTTGGAGATGCATTAAAAGTTATTGATAAACTTGCTGGTGCTTGTGAGGTAGAAGACGGTAGGGATGATCTAATTGCTCCGCCATTGGAGTTTGTTTGGAAGCATTTTCTTTTGTCCATTAGATCAGTTCTTCACCTCTTTGTGATAATGGAATCCTTGCTATGTGTCATTCCTCCAAATACATCATTTTGCAAGACATTGATTCATGAGTTTCAAGAAGTTTCTAATGAGTTGTTTGAAATAGATGTGGGAAATGGGGAAAATTTTATTCTTATTGCTGTGGCATCGCCTCTCATGCCTTCCTGTGATTGCCATCAAATCCTCTTGGATGGTGCTCCTTTATTCTTTAATAAGGGAGTGGTTTGCTCAGGAATAGTTATGGTAGTTCACAATAGTCTTCTAAGTACACCAGAAACTACCTTCTTAAAACGAACAAAAATAAATAGCAGCAAGGGGGACGATAGTGTCGTTTTGGAGAAATGTGTTGGGCAATTGGTTGGTGCAATGGTGGTGGAAGATGTGGAGATTGACTGTGGTGGTCAGGTTGTGGGTGTGGAAGCTGATGAGGAGGTGCTAAGGGTTTCTAGGCGGTATTTTGGGCTAGAAGATGGAGAGCATATCAAAGTTTGTATTGGAGATGTATTAAAAGTTTTTGATAGACTTGCTGGTGCCTGCAAGGTAGAGGTTGGTTGTTACGTGGGCAGTGCCAATGATGTTGATACTAAATTTGATGTGATTATGGTTGATTTGGATTCAAGTGATGCTAGGGATGGTCTAATTGCTCCGCCATTGGAGTTTGTTAGGAAGCACGTCCTTTTGTCAGCCAGATCAATTCTTTCTGATAATGGAATCCTAGCTATAAATGTGATTCCTCCAAATACATCATTTTACAAGACATTGATCCATGAGTCTCGAGATGTTTTTTATGAGTTATACGAAATAGATGTGGGAAATGGGGAATATTTTATTCTTGTTGCTGTGGCATCTCCTCTCATGCCTTCTAGTGATTGTGACAACTGTTTCCTCAACAAACTAGGAAAAGCTATATCGGGCCAATTCGGATTTGAGTTTCGAATCTCAAAACTCTTGCTTGCTTCTCAGACCATCATCGCCATTGTTGAAGATCCACCTCCCAGAGCCTTGAAAATGGAGCCCGAGAGAAAGCTAACGGCGGCGGCTGTGGCAGCATTCCAAGAAGGGGTCGGGTTGGTTCTGTCGCGGTGGTCGGCGCTTCAATTGGCTGTCGAGAACGAGTGGGGTGGCCGTGAATCACGCCTCAAGGCCGAGCAACTGGTCTCTGATATCGTCTCCTGGGTCAATTTCTCCACCGAACCTCTTTATATAGATGATTTAGAAGAAATGCTCATTGAAGCTATGAGTTTTCTCAATACTGTGATAGAGGATGGTAGCATTGAGGAGGTAGCTGAAAAAATAATGATTATGCATGAAGAATGTTTGGATTGCAATTTCAAGTCTATTGAAAGCCTAAGGGAAGCCAATAGTCGAAGAGTTACTACTCCTCATGTTAAACAGGTTGTCAATGATGAAGAAGACAGTGACGAGGATGATGATGATACTGATCCCAGCATGAATAATGATGATTCATCAAACATGATTGTGGACAAACCAGAGTCTCATGCAGTAGAGCCAAAGACCAAGCAGGCAGTTGAAGCGGAAGATGGTTGGGAGGTAGTCGGACCAAGAAGAAGTAGGGGTAAAAGGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0010467 GO:0016070 GO:0034641 GO:0042221 GO:0042592 GO:0043170 GO:0043900 GO:0043903 GO:0044237 GO:0044238 GO:0046483 GO:0046719 GO:0048878 GO:0050789 GO:0050792 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

683

Amino Acids

76.09

Weight (kDa)

4.57

Isoelectric Point (pI)

44.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WGG	PF10273	505 - 584	1.7e-23	Pre-rRNA-processing protein TSR2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008038)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04430 AT5G04430
fragaria_vesca	FvH4_7g06600 FvH4_7g06600 FvH4_7g06600
malus_domestica	MD02G1237900.v1.1 MD02G1241800.v1.1 MD07G1074100.v1.1
prunus_persica	Prupe.2G093900_v2.0.a1 Prupe.2G093900_v2.0.a1 Prupe.2G093900_v2.0.a1
pyrus_communis	pycom07g05820
rosa_chinensis	RchiOBHm_Chr1g0335271
rosa_laevigata	RLG00000029390
rosa_multiflora	Rmu_sc0001790.1_g000005
rosa_roxburghii	Rroxscaffold_4G00316100
rosa_rugosa	Rorug01G0121600 Rorug01G0121700 Rorug01G0121800
rosa_samantha	Rh1AG143000 Rh1BG112000 Rh1CG134700 Rh1DG148600
rosa_wichuraiana	Rw1G011810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	788
AccB1I	GGYRCC	1 cut(s)	992
AccII	CGCG	1 cut(s)	1543
AciI	CCGC	7 cut(s)	404, 913, 1109, 1496, 1499, 1543, 1997
AclWI	GGATC	3 cut(s)	1219, 1442, 1898
AcoI	YGGCCR	1 cut(s)	1585
AcsI	RAATTY	2 cut(s)	586, 1049
AfaI	GTAC	1 cut(s)	730
AfiI	CCNNNNNNNGG	2 cut(s)	44, 1522
AjiI	CACGTC	1 cut(s)	1135
AjnI	CCWGG	1 cut(s)	1634
AluBI	AGCT	6 cut(s)	884, 1181, 1367, 1489, 1697, 1748
AluI	AGCT	6 cut(s)	884, 1181, 1367, 1489, 1697, 1748
Alw21I	GWGCWC	2 cut(s)	312, 661
Alw26I	GTCTC	4 cut(s)	1239, 1624, 1636, 1962
AlwI	GGATC	3 cut(s)	1219, 1442, 1898
Ama87I	CYCGRG	2 cut(s)	1236, 1478
AoxI	GGCC	4 cut(s)	89, 1375, 1585, 1605
ApeKI	GCWGC	2 cut(s)	771, 1508
ApoI	RAATTY	2 cut(s)	586, 1049
AspLEI	GCGC	1 cut(s)	1555
AspS9I	GGNCC	2 cut(s)	1375, 2021
AsuHPI	GGTGA	2 cut(s)	317, 449
AsuII	TTCGAA	1 cut(s)	1396
AvaI	CYCGRG	2 cut(s)	1236, 1478
AvaII	GGWCC	1 cut(s)	2021
AxyI	CCTNAGG	1 cut(s)	1811
BanI	GGYRCC	1 cut(s)	992
BanII	GRGCYC	1 cut(s)	1479
BarI	GAAGNNNNNNTAC	2 cut(s)	1822, 1854
BbsI	GAAGAC	3 cut(s)	384, 713, 1881
Bbv12I	GWGCWC	2 cut(s)	312, 661
BbvI	GCAGC	2 cut(s)	783, 1520
BceAI	ACGGC	2 cut(s)	1509, 1572
BciT130I	CCWGG	1 cut(s)	1636
BcoDI	GTCTC	4 cut(s)	1239, 1624, 1636, 1962
BfaI	CTAG	8 cut(s)	189, 258, 909, 926, 1089, 1178, 1326, 1358
BfoI	RGCGCY	1 cut(s)	1556
BisI	GCNGC	4 cut(s)	772, 1497, 1500, 1509
BlsI	GCNGC	4 cut(s)	773, 1498, 1501, 1510
Bme1390I	CCNGG	1 cut(s)	1636
Bme18I	GGWCC	1 cut(s)	2021
BmeT110I	CYCGRG	2 cut(s)	1236, 1478
BmgBI	CACGTC	1 cut(s)	1135
BmgT120I	GGNCC	2 cut(s)	1375, 2021
BmiI	GGNNCC	3 cut(s)	126, 994, 1476
BmrFI	CCNGG	1 cut(s)	1636
BmsI	GCATC	4 cut(s)	322, 617, 1075, 1316
BpiI	GAAGAC	3 cut(s)	384, 713, 1881
Bpu10I	CCTNAGC	2 cut(s)	691, 899
Bpu14I	TTCGAA	1 cut(s)	1396
BpuEI	CTTGAG	1 cut(s)	1586
BsaAI	YACGTR	1 cut(s)	1021
BsaBI	GATNNNNATC	2 cut(s)	636, 1902
BsaI	GGTCTC	1 cut(s)	1624
BsaJI	CCNNGG	1 cut(s)	1635
Bsc4I	CCNNNNNNNGG	2 cut(s)	44, 1522
Bse1I	ACTGG	5 cut(s)	128, 211, 280, 300, 1620
Bse21I	CCTNAGG	1 cut(s)	1811
Bse3DI	GCAATG	1 cut(s)	834
Bse8I	GATNNNNATC	2 cut(s)	636, 1902
BseBI	CCWGG	1 cut(s)	1636
BseDI	CCNNGG	1 cut(s)	1635
BseGI	GGATG	5 cut(s)	394, 658, 1099, 1732, 1894
BseJI	GATNNNNATC	2 cut(s)	636, 1902
BseLI	CCNNNNNNNGG	2 cut(s)	44, 1522
BseMI	GCAATG	1 cut(s)	834
BseMII	CTCAG	2 cut(s)	705, 1436
BseNI	ACTGG	5 cut(s)	128, 211, 280, 300, 1620
BseRI	GAGGAG	6 cut(s)	185, 254, 905, 1302, 1754, 1833
BseXI	GCAGC	2 cut(s)	783, 1520
BseYI	CCCAGC	1 cut(s)	1907
Bsh1236I	CGCG	1 cut(s)	1543
BshFI	GGCC	4 cut(s)	91, 1377, 1587, 1607
BshNI	GGYRCC	1 cut(s)	992
BsiHKAI	GWGCWC	2 cut(s)	312, 661
BsiHKCI	CYCGRG	2 cut(s)	1236, 1478
BslFI	GGGAC	1 cut(s)	794
BslI	CCNNNNNNNGG	2 cut(s)	44, 1522
BsmAI	GTCTC	4 cut(s)	1239, 1624, 1636, 1962
BsmBI	CGTCTC	1 cut(s)	1636
BsmFI	GGGAC	1 cut(s)	794
BsmI	GAATGC	1 cut(s)	1511
BsnI	GGCC	4 cut(s)	91, 1377, 1587, 1607
Bso31I	GGTCTC	1 cut(s)	1624
BsoBI	CYCGRG	2 cut(s)	1236, 1478
Bsp119I	TTCGAA	1 cut(s)	1396
Bsp1286I	GDGCHC	3 cut(s)	312, 661, 1479
Bsp143I	GATC	6 cut(s)	391, 446, 1151, 1224, 1447, 1903
BspACI	CCGC	7 cut(s)	404, 913, 1109, 1496, 1499, 1543, 1997
BspANI	GGCC	4 cut(s)	91, 1377, 1587, 1607
BspCNI	CTCAG	2 cut(s)	704, 1435
BspFNI	CGCG	1 cut(s)	1543
BspHI	TCATGA	1 cut(s)	529
BspLI	GGNNCC	3 cut(s)	126, 994, 1476
BspPI	GGATC	3 cut(s)	1219, 1442, 1898
BspT104I	TTCGAA	1 cut(s)	1396
BspT107I	GGYRCC	1 cut(s)	992
BspTNI	GGTCTC	1 cut(s)	1624
BsrDI	GCAATG	1 cut(s)	834
BsrI	ACTGG	5 cut(s)	128, 211, 280, 300, 1620
BssECI	CCNNGG	1 cut(s)	1635
BssMI	GATC	6 cut(s)	391, 446, 1151, 1224, 1447, 1903
Bst2UI	CCWGG	1 cut(s)	1636
Bst4CI	ACNGT	5 cut(s)	383, 857, 1343, 1717, 1880
Bst6I	CTCTTC	1 cut(s)	1825
BstBAI	YACGTR	1 cut(s)	1021
BstBI	TTCGAA	1 cut(s)	1396
BstC8I	GCNNGC	3 cut(s)	997, 1416, 1986
BstDEI	CTNAG	5 cut(s)	691, 725, 899, 1422, 1811
BstF5I	GGATG	5 cut(s)	394, 658, 1099, 1732, 1894
BstFNI	CGCG	1 cut(s)	1543
BstH2I	RGCGCY	1 cut(s)	1556
BstHHI	GCGC	1 cut(s)	1555
BstKTI	GATC	6 cut(s)	394, 449, 1154, 1227, 1450, 1906
BstMAI	GTCTC	4 cut(s)	1239, 1624, 1636, 1962
BstMBI	GATC	6 cut(s)	391, 446, 1151, 1224, 1447, 1903
BstMWI	GCNNNNNNNGC	4 cut(s)	619, 1505, 1508, 1994
BstNI	CCWGG	1 cut(s)	1636
BstSCI	CCNGG	1 cut(s)	1634
BstUI	CGCG	1 cut(s)	1543
BstV1I	GCAGC	2 cut(s)	783, 1520
BstV2I	GAAGAC	3 cut(s)	384, 713, 1881
BstX2I	RGATCY	1 cut(s)	1447
BstYI	RGATCY	1 cut(s)	1447
Bsu36I	CCTNAGG	1 cut(s)	1811
BsuRI	GGCC	4 cut(s)	91, 1377, 1587, 1607
BtgZI	GCGATG	2 cut(s)	594, 1417
BtrI	CACGTC	1 cut(s)	1135
BtsCI	GGATG	5 cut(s)	394, 658, 1099, 1732, 1894
BtsI	GCAGTG	1 cut(s)	1033
BtsIMutI	CAGTG	3 cut(s)	135, 1033, 1885
Cac8I	GCNNGC	3 cut(s)	997, 1416, 1986
CciI	TCATGA	1 cut(s)	529
CfoI	GCGC	1 cut(s)	1555
Cfr13I	GGNCC	2 cut(s)	1375, 2021
Csp6I	GTAC	1 cut(s)	729
CspCI	CAANNNNNGTGG	2 cut(s)	816, 851
CviAII	CATG	9 cut(s)	530, 619, 1229, 1318, 1769, 1847, 1912, 1936, 1961
CviQI	GTAC	1 cut(s)	729
DdeI	CTNAG	5 cut(s)	691, 725, 899, 1422, 1811
DpnI	GATC	6 cut(s)	393, 448, 1153, 1226, 1449, 1905
DpnII	GATC	6 cut(s)	391, 446, 1151, 1224, 1447, 1903
DrdI	GACNNNNNNGTC	1 cut(s)	788
DseDI	GACNNNNNNGTC	1 cut(s)	788
EaeI	YGGCCR	1 cut(s)	1585
Eam1104I	CTCTTC	1 cut(s)	1825
EarI	CTCTTC	1 cut(s)	1825
EciI	GGCGGA	2 cut(s)	393, 1098
Eco24I	GRGCYC	1 cut(s)	1479
Eco31I	GGTCTC	1 cut(s)	1624
Eco32I	GATATC	1 cut(s)	1627
Eco47I	GGWCC	1 cut(s)	2021
Eco81I	CCTNAGG	1 cut(s)	1811
Eco88I	CYCGRG	2 cut(s)	1236, 1478
EcoRII	CCWGG	1 cut(s)	1634
EcoRV	GATATC	1 cut(s)	1627
EcoT22I	ATGCAT	2 cut(s)	337, 1770
EcoT38I	GRGCYC	1 cut(s)	1479
Esp3I	CGTCTC	1 cut(s)	1636
FaeI	CATG	9 cut(s)	533, 622, 1232, 1321, 1772, 1850, 1915, 1939, 1964
FaqI	GGGAC	1 cut(s)	794
FatI	CATG	9 cut(s)	529, 618, 1228, 1317, 1768, 1846, 1911, 1935, 1960
Fnu4HI	GCNGC	4 cut(s)	772, 1497, 1500, 1509
FokI	GGATG	5 cut(s)	401, 665, 1106, 1739, 1901
FriOI	GRGCYC	1 cut(s)	1479
Fsp4HI	GCNGC	4 cut(s)	772, 1497, 1500, 1509
FspBI	CTAG	8 cut(s)	189, 258, 909, 926, 1089, 1178, 1326, 1358
GlaI	GCGC	1 cut(s)	1554
GluI	GCNGC	4 cut(s)	772, 1497, 1500, 1509
GsaI	CCCAGC	1 cut(s)	1911
HaeII	RGCGCY	1 cut(s)	1556
HaeIII	GGCC	4 cut(s)	91, 1377, 1587, 1607
HhaI	GCGC	1 cut(s)	1555
Hin1II	CATG	9 cut(s)	533, 622, 1232, 1321, 1772, 1850, 1915, 1939, 1964
Hin6I	GCGC	1 cut(s)	1553
HinP1I	GCGC	1 cut(s)	1553
HphI	GGTGA	2 cut(s)	317, 449
Hpy166II	GTNNAC	3 cut(s)	712, 731, 1945
Hpy188I	TCNGA	5 cut(s)	1165, 1385, 1425, 1624, 2021
Hpy188III	TCNNGA	6 cut(s)	530, 539, 693, 1236, 1238, 1570
Hpy8I	GTNNAC	3 cut(s)	712, 731, 1945
HpyAV	CCTTC	4 cut(s)	633, 754, 1332, 1514
HpyCH4III	ACNGT	5 cut(s)	383, 857, 1343, 1717, 1880
HpyCH4IV	ACGT	2 cut(s)	1020, 1134
HpyCH4V	TGCA	7 cut(s)	335, 516, 827, 999, 1768, 1788, 1964
HpyF10VI	GCNNNNNNNGC	4 cut(s)	619, 1505, 1508, 1994
HpyF3I	CTNAG	5 cut(s)	691, 725, 899, 1422, 1811
HpySE526I	ACGT	2 cut(s)	1020, 1134
Hsp92II	CATG	9 cut(s)	533, 622, 1232, 1321, 1772, 1850, 1915, 1939, 1964
HspAI	GCGC	1 cut(s)	1553
Kzo9I	GATC	6 cut(s)	391, 446, 1151, 1224, 1447, 1903
LmnI	GCTCC	4 cut(s)	406, 664, 1111, 1474
Lsp1109I	GCAGC	2 cut(s)	783, 1520
LweI	GCATC	4 cut(s)	322, 617, 1075, 1316
MaeI	CTAG	8 cut(s)	189, 258, 909, 926, 1089, 1178, 1326, 1358
MaeII	ACGT	2 cut(s)	1020, 1134
MaeIII	GTNAC	4 cut(s)	1016, 1334, 1834, 1880
MalI	GATC	6 cut(s)	393, 448, 1153, 1226, 1449, 1905
MboI	GATC	6 cut(s)	391, 446, 1151, 1224, 1447, 1903
MfeI	CAATTG	2 cut(s)	815, 1559
MflI	RGATCY	1 cut(s)	1447
MhlI	GDGCHC	3 cut(s)	312, 661, 1479
MlyI	GAGTC	2 cut(s)	1241, 1964
MmeI	TCCRAC	2 cut(s)	307, 1999
Mph1103I	ATGCAT	2 cut(s)	337, 1770
MseI	TTAA	5 cut(s)	338, 672, 749, 968, 1851
MslI	CAYNNNNRTG	1 cut(s)	1940
MspR9I	CCNGG	1 cut(s)	1636
MunI	CAATTG	2 cut(s)	815, 1559
Mva1269I	GAATGC	1 cut(s)	1511
MvaI	CCWGG	1 cut(s)	1636
MvnI	CGCG	1 cut(s)	1543
MwoI	GCNNNNNNNGC	4 cut(s)	619, 1505, 1508, 1994
NdeII	GATC	6 cut(s)	391, 446, 1151, 1224, 1447, 1903
NlaIII	CATG	9 cut(s)	533, 622, 1232, 1321, 1772, 1850, 1915, 1939, 1964
NlaIV	GGNNCC	3 cut(s)	126, 994, 1476
NmeAIII	GCCGAG	1 cut(s)	1633
NmuCI	GTSAC	2 cut(s)	1334, 1880
NsiI	ATGCAT	2 cut(s)	337, 1770
NspV	TTCGAA	1 cut(s)	1396
PaeR7I	CTCGAG	1 cut(s)	1236
PagI	TCATGA	1 cut(s)	529
PcsI	WCGNNNNNNNCGW	1 cut(s)	789
PctI	GAATGC	1 cut(s)	1511
PfeI	GAWTC	8 cut(s)	476, 526, 1076, 1173, 1192, 1398, 1592, 1925
PkrI	GCNGC	4 cut(s)	773, 1498, 1501, 1510
PleI	GAGTC	2 cut(s)	1240, 1963
PpsI	GAGTC	2 cut(s)	1240, 1963
Ppu21I	YACGTR	1 cut(s)	1021
Psp6I	CCWGG	1 cut(s)	1634
PspFI	CCCAGC	1 cut(s)	1907
PspGI	CCWGG	1 cut(s)	1634
PspN4I	GGNNCC	3 cut(s)	126, 994, 1476
PspPI	GGNCC	2 cut(s)	1375, 2021
PsuI	RGATCY	1 cut(s)	1447
RsaI	GTAC	1 cut(s)	730
RsaNI	GTAC	1 cut(s)	729
RseI	CAYNNNNRTG	1 cut(s)	1940
SaqAI	TTAA	5 cut(s)	338, 672, 749, 968, 1851
SatI	GCNGC	4 cut(s)	772, 1497, 1500, 1509
Sau3AI	GATC	6 cut(s)	391, 446, 1151, 1224, 1447, 1903
Sau96I	GGNCC	2 cut(s)	1375, 2021
SchI	GAGTC	2 cut(s)	1241, 1964
ScrFI	CCNGG	1 cut(s)	1636
SduI	GDGCHC	3 cut(s)	312, 661, 1479
SfaNI	GCATC	4 cut(s)	322, 617, 1075, 1316
Sfr274I	CTCGAG	1 cut(s)	1236
SfuI	TTCGAA	1 cut(s)	1396
SinI	GGWCC	1 cut(s)	2021
SlaI	CTCGAG	1 cut(s)	1236
SmiMI	CAYNNNNRTG	1 cut(s)	1940
SmlI	CTYRAG	2 cut(s)	1236, 1601
SmoI	CTYRAG	2 cut(s)	1236, 1601
SsiI	CCGC	7 cut(s)	404, 913, 1109, 1496, 1499, 1543, 1997
SspI	AATATT	1 cut(s)	1286
SspMI	CTAG	8 cut(s)	189, 258, 909, 926, 1089, 1178, 1326, 1358
StyD4I	CCNGG	1 cut(s)	1634
TaaI	ACNGT	5 cut(s)	383, 857, 1343, 1717, 1880
TaiI	ACGT	2 cut(s)	1023, 1137
TaqI	TCGA	4 cut(s)	1237, 1396, 1569, 1828
TatI	WGTACW	1 cut(s)	728
TauI	GCSGC	2 cut(s)	1499, 1502
TfiI	GAWTC	8 cut(s)	476, 526, 1076, 1173, 1192, 1398, 1592, 1925
Tru1I	TTAA	5 cut(s)	338, 672, 749, 968, 1851
Tru9I	TTAA	5 cut(s)	338, 672, 749, 968, 1851
TscAI	CASTG	3 cut(s)	135, 1033, 1885
TseFI	GTSAC	2 cut(s)	1334, 1880
TseI	GCWGC	2 cut(s)	771, 1508
Tsp45I	GTSAC	2 cut(s)	1334, 1880
TspDTI	ATGAA	5 cut(s)	518, 1785, 1884, 1917, 1928
TspRI	CASTG	3 cut(s)	135, 1033, 1885
VpaK11BI	GGWCC	1 cut(s)	2021
XapI	RAATTY	2 cut(s)	586, 1049
XhoI	CTCGAG	1 cut(s)	1236
XspI	CTAG	8 cut(s)	189, 258, 909, 926, 1089, 1178, 1326, 1358
Zsp2I	ATGCAT	2 cut(s)	337, 1770

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.