Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0004764

Physical Location & Seq

Genomic Coordinates Reverse (-)

41067768 .. 41077149

Gene Structure 9382 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0295100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2514 bp

ATGAAAGAGAGTAGAGATGGAATCAAGAGCGAAAGACGTGCGAAAAATTCATCAGTTAGCTCACTTCCACTCATCTTGGACATAGACGACTTTAAGGGTGAATTTTCATTTGATGCATTGTTTGGAAACCTGGTAAATGATCTCCTCCCATCCTTTCAAGAAGATGAAACAGATTCATCTGAGGGTCATAGCAACATCAGCGGGACTGACTCTTTGCCAAATGGACATATGCGAGCCCCGTCAGATGCAACAAGATTTGCGCAGGGAGTGTCTGACCCTTTATTTCCAGAAGTAGATAAGATCTTATCTCTGTTCAAGGATTCTTGTAAAGAGTTGGTTGATCTCCAGACACAGATTGATGGAAAGCTATTAAATCTTAAGAAGGATGTTTCTGTACAAGATTCTAAGCACCGCAAGACACTTACTGAGCTTGAAAAAGGAGTAGACGGCTTGTTTGGTAGCTTTGCCAGGTTGGATTCACGTATATCAAGTGTTGGACAGACTGCTGCAAAAATAGGAGATCATCTGCAGAGTGCAGATGCTCAGCGGGAAACTGCTAGTCAATCAATAGAGCTCATAAAGTACTTGATGGAGTTTAATAGCAGCCCAGGCGATCTAATGGAACTTTCACCTCTATTTTCCGATGACAGTCGTGTTGCAGAGGCTGCTAAAATTGCACAAAAACTGCGGGCATTTGCTGAGGAAGATATTGGAAGAACTGTACCATCGGTCATGGGCAATGCAGCCGCTAGCAGAGGATTAGAAGTTGCAGTTGCTAATCTTCAGGAGTACTGTAACGAATTGGAGAACAGACTGCTAGCTCGATTTGATGCCGCATCACAGAGAAGAGATTTGTCTACCATGGCAGAATGTGCTAAAATTTTATCTCAGTTTAACAGGGGAACTAGTGCCATGCAACATTATGTGGCAACACGTCCAATGTTTATTGACGTGGAAGTCATGAATGCAGATACCAGATTGGTTCTTGGTGACGAGGGTTCCCAGGCTAGTCCTAGCAATGTTTCTCGTGGACTTTCTTCCTTGTACAAAGAAATCACAGATACTGTACGGAAGGAAGCAGCAACAATTATGGCTGTATTCCCTTCTCCTAATGAAGTTATGTCAATCTTAGTTCAGCGAGTTTTAGAGCAGAGAATTACAGCTTTATTGGACAAATTATTGGTAAAACCATCTCTCGTGAACCTACCTCCTATGGAAGAAGGGGGCCTTCTATTATATCTTAGAATGCTAGCGGTGGCATATGAGAAGACGCAAGATCTTGCTAAGGACCTGCGAGCCGTGGGATGTGGTGACTTGGATGTCGAGGGCCTCACAGAGTCTTTGTTTTCTGCTCACAAGGATGGATATCCTGAACATGAGCAGGCCTCTCTTAAACAACTATATCAAGCTAAGATGGCAGAACTACGTGCTGAAAGTCAGCAGACATCTGAATCAAGTGGAACAATCGGGCGCTCAAAAGGGGCAGCAGTAGCATCTTCCAACCAGCAAATATCTGTCACTGTTGTGACAGAGTTTGTTCGTTGGAATGAAGAAGCAATTACCAGATGCACTCTGTTCTCATCCCAACCTGCAACCCTTGCAGCAAATGTAAAATCGGTGTTCACTTCCCTCCTAGGCCAAGTCAGTAAATATATAACAGAAGGTCTTGAACGAGCAAGAGACAGCTTGACTGAAGCTGCATCTTTAAGGGAAAGATTTGTATTGGGTACTAGTATGAGTAGAAGGGTGGCTGCTGCAGCTGCTTCTGCTGCAGAAGCTGCTGCTGCTGCTGGTGAAAGCAGTTTCAGATCTTTCATGGTTGCTGTACAACGTTGTGGTAGCAGTGTGGCTATAGTTCAGCAATATTTTTCAAATTCTATCTCTCGGCTTCTACTCCCAGTTGATGGAGCGCATGCTGCTTCATGTGAAGAAATGGCAACAGCTATGTCAAGTGCAGAGGGTGCTGCATATAAAGGGCTTCAACAATGTATTGAAACTGTGATGGCTGAGGTGGAGCGGTTACTTTCTTCTGAACAGAAGGCAACAGATTACAGATCACCAGAAGATGGATTTGCTCCTGATCATCGGCCGACAAATGCCTGCACGAGAGTTGTAGCTTATCTTTCCCGTATACTAGAATCTGCATTCTCAGCACTTGAGGGTCTTAACAAGCAAGCATTTTTGACTGAATTAGGAAATCGCTTGCATAAAGGGCTACTAACACATTGGCAGAAGTTCACTTTCAATCCCAGTGGAGGATTACGGCTGAAGCGTGACATAACTGAATATGGAGAATTTGTGCGGAGTTTTAATGCTCCTTCTGTTGATGAAAAATTTGAATTGCTTGGCATAATGGCCAATGTCTTTATTGTTGCTCCTGAAAGTCTCTCAACTCTGTTTGAGGGTACCCCCAGTATACGGAAAGATGCACAGAGGTTTATTGAGCTTAGAGATGACTACAAGAGTGCAAAACTTGCTTCCAGACTTAGTTCCTTGTGGGCAAGCTCAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0005983 GO:0006073 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009250 GO:0009251 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010303 GO:0016051 GO:0016052 GO:0016787 GO:0016798 GO:0019252 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051060 GO:0071704 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM_48 DUF3372

Protein Analysis

837

Amino Acids

91.32

Weight (kDa)

5.29

Isoelectric Point (pI)

49.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec10_N	PF20667	99 - 215	5.7e-31	Exocyst complex component Sec10, N-terminal
Sec10_HB	PF07393	221 - 827	5.5e-153	Exocyst complex component Sec10-like, alpha-helical bundle

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04360 AT5G04360
fragaria_vesca	FvH4_7g18370 FvH4_7g18370 FvH4_7g18370 FvH4_7g18370 FvH4_7g18370 FvH4_7g18370 FvH4_7g18370 FvH4_7g18370 FvH4_7g18370
malus_domestica	MD01G1100100.v1.1
prunus_persica	Prupe.2G205800_v2.0.a1 Prupe.2G205800_v2.0.a1 Prupe.2G205800_v2.0.a1 Prupe.2G205800_v2.0.a1 Prupe.2G205800_v2.0.a1
pyrus_communis	pycom01g12720
rosa_chinensis	RchiOBHm_Chr1g0362181
rosa_laevigata	RLG00000027669
rosa_multiflora	Rmu_sc0002133.1_g000006
rosa_roxburghii	Rroxscaffold_4G00294460
rosa_rugosa	Rorug01G0294900 Rorug01G0295000 Rorug01G0295100 Rorug01G0295200
rosa_samantha	Rh1AG304800 Rh1BG267600 Rh1CG285800 Rh1DG297600
rosa_wichuraiana	Rw1G027110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	956, 1319
Acc16I	TGCGCA	1 cut(s)	261
Acc36I	ACCTGC	2 cut(s)	1299, 1597
Acc65I	GGTACC	1 cut(s)	2405
AccB1I	GGYRCC	1 cut(s)	2405
AccB7I	CCANNNNNTGG	2 cut(s)	1904, 2066
AccBSI	CCGCTC	1 cut(s)	2017
AccI	GTMKAC	4 cut(s)	444, 857, 2131, 2416
AciI	CCGC	9 cut(s)	201, 412, 547, 688, 747, 834, 1253, 2017, 2302
AclI	AACGTT	1 cut(s)	1831
AcoI	YGGCCR	2 cut(s)	2087, 2355
AcsI	RAATTY	6 cut(s)	46, 101, 879, 1873, 2294, 2333
AcuI	CTGAAG	3 cut(s)	767, 1713, 2288
AfaI	GTAC	9 cut(s)	396, 584, 723, 791, 1046, 1068, 1729, 1827, 2407
AfiI	CCNNNNNNNGG	4 cut(s)	1904, 2066, 2255, 2418
AflII	CTTAAG	1 cut(s)	377
AflIII	ACRYGT	1 cut(s)	932
AgsI	TTSAA	9 cut(s)	158, 316, 434, 1670, 1872, 1982, 1994, 2245, 2339
AhlI	ACTAGT	2 cut(s)	905, 1730
AjiI	CACGTC	3 cut(s)	38, 935, 952
AjnI	CCWGG	4 cut(s)	129, 467, 607, 1002
AleI	CACNNNNGTG	1 cut(s)	1523
Alw21I	GWGCWC	1 cut(s)	576
Alw26I	GTCTC	2 cut(s)	1674, 2390
AlwNI	CAGNNNCTG	3 cut(s)	665, 1064, 1778
AoxI	GGCC	6 cut(s)	1225, 1327, 1383, 1636, 2087, 2355
ApoI	RAATTY	6 cut(s)	46, 101, 879, 1873, 2294, 2333
ArsI	GACNNNNNNTTYG	4 cut(s)	196, 228, 437, 469
Asp718I	GGTACC	1 cut(s)	2405
AspA2I	CCTAGG	1 cut(s)	1633
AspLEI	GCGC	3 cut(s)	262, 1473, 1912
AspS9I	GGNCC	3 cut(s)	1225, 1288, 1327
AsuHPI	GGTGA	6 cut(s)	110, 621, 1001, 1322, 1805, 2049
AsuNHI	GCTAGC	3 cut(s)	749, 817, 1249
AvaII	GGWCC	1 cut(s)	1288
AvrII	CCTAGG	1 cut(s)	1633
BalI	TGGCCA	1 cut(s)	2357
BanI	GGYRCC	1 cut(s)	2405
BanII	GRGCYC	2 cut(s)	238, 576
BauI	CACGAG	3 cut(s)	1026, 1196, 2104
BbsI	GAAGAC	1 cut(s)	1274
Bbv12I	GWGCWC	1 cut(s)	576
BbvCI	CCTCAGC	2 cut(s)	699, 2007
BceAI	ACGGC	3 cut(s)	463, 1283, 2279
BcgI	CGANNNNNNTGC	2 cut(s)	20, 54
BciT130I	CCWGG	4 cut(s)	131, 469, 609, 1004
BclI	TGATCA	1 cut(s)	2080
BcoDI	GTCTC	2 cut(s)	1674, 2390
BcuI	ACTAGT	2 cut(s)	905, 1730
BfmI	CTRYAG	4 cut(s)	527, 1755, 1770, 1851
BfoI	RGCGCY	1 cut(s)	1474
BfrI	CTTAAG	1 cut(s)	377
BfuAI	ACCTGC	2 cut(s)	1299, 1597
BglII	AGATCT	3 cut(s)	300, 1276, 1808
BlnI	CCTAGG	1 cut(s)	1633
BlpI	GCTNAGC	1 cut(s)	543
BmcAI	AGTACT	2 cut(s)	584, 791
Bme1390I	CCNGG	4 cut(s)	131, 469, 609, 1004
Bme18I	GGWCC	1 cut(s)	1288
BmgBI	CACGTC	3 cut(s)	38, 935, 952
BmgT120I	GGNCC	3 cut(s)	1225, 1288, 1327
BmiI	GGNNCC	3 cut(s)	1000, 1226, 2407
BmrFI	CCNGG	4 cut(s)	131, 469, 609, 1004
BmrI	ACTGGG	3 cut(s)	1892, 2244, 2406
BmsI	GCATC	9 cut(s)	103, 235, 529, 820, 845, 1502, 1556, 1709, 2416
BmtI	GCTAGC	3 cut(s)	753, 821, 1253
BmuI	ACTGGG	3 cut(s)	1892, 2244, 2406
BpiI	GAAGAC	1 cut(s)	1274
BplI	GAGNNNNNCTC	2 cut(s)	1370, 1402
BpmI	CTGGAG	1 cut(s)	329
Bpu10I	CCTNAGC	4 cut(s)	699, 1284, 2007, 2506
Bpu1102I	GCTNAGC	1 cut(s)	543
BpuEI	CTTGAG	1 cut(s)	2177
BsaAI	YACGTR	2 cut(s)	482, 1427
BsaBI	GATNNNNATC	1 cut(s)	1365
BsaJI	CCNNGG	5 cut(s)	607, 861, 1002, 1299, 1633
BsaXI	ACNNNNNCTCC	2 cut(s)	2283, 2313
Bsc4I	CCNNNNNNNGG	4 cut(s)	1904, 2066, 2255, 2418
Bse1I	ACTGG	3 cut(s)	1898, 2250, 2412
Bse3DI	GCAATG	2 cut(s)	745, 1024
Bse8I	GATNNNNATC	1 cut(s)	1365
BseBI	CCWGG	4 cut(s)	131, 469, 609, 1004
BseDI	CCNNGG	5 cut(s)	607, 861, 1002, 1299, 1633
BseGI	GGATG	6 cut(s)	149, 391, 1310, 1324, 1366, 1580
BseJI	GATNNNNATC	1 cut(s)	1365
BseLI	CCNNNNNNNGG	4 cut(s)	1904, 2066, 2255, 2418
BseMI	GCAATG	2 cut(s)	745, 1024
BseMII	CTCAG	7 cut(s)	171, 417, 557, 690, 902, 1998, 2163
BseNI	ACTGG	3 cut(s)	1898, 2250, 2412
BseRI	GAGGAG	1 cut(s)	134
BseX3I	CGGCCG	1 cut(s)	2087
BsgI	GTGCAG	3 cut(s)	555, 1974, 2086
Bsh1285I	CGRYCG	1 cut(s)	2090
BshFI	GGCC	6 cut(s)	1227, 1329, 1385, 1638, 2089, 2357
BshNI	GGYRCC	1 cut(s)	2405
BsiEI	CGRYCG	1 cut(s)	2090
BsiHKAI	GWGCWC	1 cut(s)	576
BslFI	GGGAC	1 cut(s)	217
BslI	CCNNNNNNNGG	4 cut(s)	1904, 2066, 2255, 2418
BsmAI	GTCTC	2 cut(s)	1674, 2390
BsmFI	GGGAC	1 cut(s)	217
BsmI	GAATGC	3 cut(s)	970, 1251, 2144
BsnI	GGCC	6 cut(s)	1227, 1329, 1385, 1638, 2089, 2357
Bsp1286I	GDGCHC	2 cut(s)	238, 576
Bsp1407I	TGTACA	3 cut(s)	394, 1044, 1825
Bsp143I	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
Bsp1720I	GCTNAGC	1 cut(s)	543
Bsp19I	CCATGG	1 cut(s)	861
BspACI	CCGC	9 cut(s)	201, 412, 547, 688, 747, 834, 1253, 2017, 2302
BspANI	GGCC	6 cut(s)	1227, 1329, 1385, 1638, 2089, 2357
BspCNI	CTCAG	7 cut(s)	172, 418, 556, 691, 901, 1999, 2162
BspHI	TCATGA	1 cut(s)	960
BspLI	GGNNCC	3 cut(s)	1000, 1226, 2407
BspMAI	CTGCAG	3 cut(s)	531, 1759, 1774
BspMI	ACCTGC	2 cut(s)	1299, 1597
BspOI	GCTAGC	3 cut(s)	753, 821, 1253
BspT107I	GGYRCC	1 cut(s)	2405
BspTI	CTTAAG	1 cut(s)	377
BsrBI	CCGCTC	1 cut(s)	2017
BsrDI	GCAATG	2 cut(s)	745, 1024
BsrGI	TGTACA	3 cut(s)	394, 1044, 1825
BsrI	ACTGG	3 cut(s)	1898, 2250, 2412
BssECI	CCNNGG	5 cut(s)	607, 861, 1002, 1299, 1633
BssMI	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
BssNAI	GTATAC	2 cut(s)	2132, 2417
BssSI	CACGAG	3 cut(s)	1026, 1196, 2104
BssT1I	CCWWGG	2 cut(s)	861, 1633
Bst1107I	GTATAC	2 cut(s)	2132, 2417
Bst2BI	CACGAG	3 cut(s)	1026, 1196, 2104
Bst2UI	CCWGG	4 cut(s)	131, 469, 609, 1004
Bst4CI	ACNGT	6 cut(s)	650, 721, 794, 1066, 1522, 1999
Bst6I	CTCTTC	1 cut(s)	841
BstAFI	CTTAAG	1 cut(s)	377
BstAPI	GCANNNNNTGC	6 cut(s)	665, 872, 1598, 1778, 1961, 2474
BstAUI	TGTACA	3 cut(s)	394, 1044, 1825
BstBAI	YACGTR	2 cut(s)	482, 1427
BstDSI	CCRYGG	2 cut(s)	861, 1299
BstF5I	GGATG	6 cut(s)	149, 391, 1310, 1324, 1366, 1580
BstH2I	RGCGCY	1 cut(s)	1474
BstHHI	GCGC	3 cut(s)	262, 1473, 1912
BstKTI	GATC	9 cut(s)	142, 303, 343, 523, 616, 1279, 1811, 2057, 2083
BstMAI	GTCTC	2 cut(s)	1674, 2390
BstMBI	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
BstMCI	CGRYCG	1 cut(s)	2090
BstNI	CCWGG	4 cut(s)	131, 469, 609, 1004
BstNSI	RCATGY	1 cut(s)	1916
BstSCI	CCNGG	4 cut(s)	129, 467, 607, 1002
BstSFI	CTRYAG	4 cut(s)	527, 1755, 1770, 1851
BstV2I	GAAGAC	1 cut(s)	1274
BstX2I	RGATCY	3 cut(s)	300, 1276, 1808
BstYI	RGATCY	3 cut(s)	300, 1276, 1808
BstZ17I	GTATAC	2 cut(s)	2132, 2417
BstZI	CGGCCG	1 cut(s)	2087
BsuRI	GGCC	6 cut(s)	1227, 1329, 1385, 1638, 2089, 2357
BtgI	CCRYGG	2 cut(s)	861, 1299
BtrI	CACGTC	3 cut(s)	38, 935, 952
BtsCI	GGATG	6 cut(s)	149, 391, 1310, 1324, 1366, 1580
BtsI	GCAGTG	1 cut(s)	1849
BtsIMutI	CAGTG	3 cut(s)	1518, 1849, 2257
BveI	ACCTGC	2 cut(s)	1299, 1597
CaiI	CAGNNNCTG	3 cut(s)	665, 1064, 1778
CciI	TCATGA	1 cut(s)	960
CfoI	GCGC	3 cut(s)	262, 1473, 1912
Cfr13I	GGNCC	3 cut(s)	1225, 1288, 1327
CseI	GACGC	1 cut(s)	1279
CsiI	ACCWGGT	1 cut(s)	129
Csp6I	GTAC	9 cut(s)	395, 583, 722, 790, 1045, 1067, 1728, 1826, 2406
CspCI	CAANNNNNGTGG	4 cut(s)	57, 92, 2233, 2268
CviAII	CATG	8 cut(s)	733, 862, 913, 961, 1376, 1816, 1913, 1923
CviQI	GTAC	9 cut(s)	395, 583, 722, 790, 1045, 1067, 1728, 1826, 2406
DpnI	GATC	9 cut(s)	141, 302, 342, 522, 615, 1278, 1810, 2056, 2082
DpnII	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
DrdI	GACNNNNNNGTC	2 cut(s)	956, 1319
DseDI	GACNNNNNNGTC	2 cut(s)	956, 1319
EaeI	YGGCCR	2 cut(s)	2087, 2355
EagI	CGGCCG	1 cut(s)	2087
Eam1104I	CTCTTC	1 cut(s)	841
EarI	CTCTTC	1 cut(s)	841
Ecl136II	GAGCTC	1 cut(s)	574
EclXI	CGGCCG	1 cut(s)	2087
Eco130I	CCWWGG	2 cut(s)	861, 1633
Eco147I	AGGCCT	1 cut(s)	1385
Eco24I	GRGCYC	2 cut(s)	238, 576
Eco32I	GATATC	1 cut(s)	1367
Eco47I	GGWCC	1 cut(s)	1288
Eco52I	CGGCCG	1 cut(s)	2087
Eco53kI	GAGCTC	1 cut(s)	574
Eco57I	CTGAAG	3 cut(s)	767, 1713, 2288
EcoICRI	GAGCTC	1 cut(s)	574
EcoO109I	RGGNCCY	3 cut(s)	1225, 1288, 1327
EcoRII	CCWGG	4 cut(s)	129, 467, 607, 1002
EcoRV	GATATC	1 cut(s)	1367
EcoT14I	CCWWGG	2 cut(s)	861, 1633
EcoT22I	ATGCAT	1 cut(s)	118
EcoT38I	GRGCYC	2 cut(s)	238, 576
ErhI	CCWWGG	2 cut(s)	861, 1633
FaeI	CATG	8 cut(s)	736, 865, 916, 964, 1379, 1819, 1916, 1926
FalI	AAGNNNNNCTT	2 cut(s)	1212, 1244
FaqI	GGGAC	1 cut(s)	217
FatI	CATG	8 cut(s)	732, 861, 912, 960, 1375, 1815, 1912, 1922
FauI	CCCGC	3 cut(s)	194, 540, 681
FauNDI	CATATG	2 cut(s)	228, 1261
FbaI	TGATCA	1 cut(s)	2080
FblI	GTMKAC	4 cut(s)	444, 857, 2131, 2416
FokI	GGATG	6 cut(s)	136, 398, 1317, 1331, 1373, 1567
FriOI	GRGCYC	2 cut(s)	238, 576
FspI	TGCGCA	1 cut(s)	261
GlaI	GCGC	3 cut(s)	261, 1472, 1911
GsuI	CTGGAG	1 cut(s)	329
HaeII	RGCGCY	1 cut(s)	1474
HaeIII	GGCC	6 cut(s)	1227, 1329, 1385, 1638, 2089, 2357
HgaI	GACGC	1 cut(s)	1279
HhaI	GCGC	3 cut(s)	262, 1473, 1912
Hin1II	CATG	8 cut(s)	736, 865, 916, 964, 1379, 1819, 1916, 1926
Hin6I	GCGC	3 cut(s)	260, 1471, 1910
HinP1I	GCGC	3 cut(s)	260, 1471, 1910
HinfI	GANTC	9 cut(s)	21, 173, 209, 320, 401, 476, 1337, 1451, 2138
HphI	GGTGA	6 cut(s)	110, 621, 1001, 1322, 1805, 2049
Hpy166II	GTNNAC	8 cut(s)	445, 858, 1031, 1201, 1623, 2132, 2238, 2417
Hpy188I	TCNGA	7 cut(s)	181, 244, 274, 643, 1450, 1808, 2032
Hpy8I	GTNNAC	8 cut(s)	445, 858, 1031, 1201, 1623, 2132, 2238, 2417
HpyAV	CCTTC	9 cut(s)	376, 1066, 1113, 1214, 1238, 1655, 1737, 2032, 2328
HpyCH4III	ACNGT	6 cut(s)	650, 721, 794, 1066, 1522, 1999
HpyCH4IV	ACGT	6 cut(s)	37, 481, 934, 951, 1426, 1831
HpySE526I	ACGT	6 cut(s)	37, 481, 934, 951, 1426, 1831
Hsp92II	CATG	8 cut(s)	736, 865, 916, 964, 1379, 1819, 1916, 1926
HspAI	GCGC	3 cut(s)	260, 1471, 1910
KpnI	GGTACC	1 cut(s)	2409
Ksp22I	TGATCA	1 cut(s)	2080
Kzo9I	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
LmnI	GCTCC	5 cut(s)	1907, 2014, 2080, 2320, 2380
LweI	GCATC	9 cut(s)	103, 235, 529, 820, 845, 1502, 1556, 1709, 2416
MabI	ACCWGGT	1 cut(s)	129
MaeII	ACGT	6 cut(s)	37, 481, 934, 951, 1426, 1831
MaeIII	GTNAC	7 cut(s)	794, 989, 1310, 1516, 1525, 2019, 2273
MalI	GATC	9 cut(s)	141, 302, 342, 522, 615, 1278, 1810, 2056, 2082
MbiI	CCGCTC	1 cut(s)	2017
MboI	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
MflI	RGATCY	3 cut(s)	300, 1276, 1808
MhlI	GDGCHC	2 cut(s)	238, 576
MlsI	TGGCCA	1 cut(s)	2357
MluNI	TGGCCA	1 cut(s)	2357
MlyI	GAGTC	2 cut(s)	203, 1346
MmeI	TCCRAC	4 cut(s)	453, 475, 1523, 1524
Mox20I	TGGCCA	1 cut(s)	2357
Mph1103I	ATGCAT	1 cut(s)	118
MscI	TGGCCA	1 cut(s)	2357
MseI	TTAA	9 cut(s)	93, 371, 378, 597, 894, 1392, 1706, 2166, 2310
MslI	CAYNNNNRTG	2 cut(s)	1359, 1523
Msp20I	TGGCCA	1 cut(s)	2357
MspA1I	CMGCKG	3 cut(s)	201, 547, 1760
MspCI	CTTAAG	1 cut(s)	377
MspR9I	CCNGG	4 cut(s)	131, 469, 609, 1004
Mva1269I	GAATGC	3 cut(s)	970, 1251, 2144
MvaI	CCWGG	4 cut(s)	131, 469, 609, 1004
NcoI	CCATGG	1 cut(s)	861
NdeI	CATATG	2 cut(s)	228, 1261
NdeII	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
NheI	GCTAGC	3 cut(s)	749, 817, 1249
NlaIII	CATG	8 cut(s)	736, 865, 916, 964, 1379, 1819, 1916, 1926
NlaIV	GGNNCC	3 cut(s)	1000, 1226, 2407
NmeAIII	GCCGAG	1 cut(s)	1864
NmuCI	GTSAC	5 cut(s)	989, 1310, 1516, 1525, 2273
NsbI	TGCGCA	1 cut(s)	261
NsiI	ATGCAT	1 cut(s)	118
NspI	RCATGY	1 cut(s)	1916
OliI	CACNNNNGTG	1 cut(s)	1523
PaeI	GCATGC	1 cut(s)	1916
PagI	TCATGA	1 cut(s)	960
PceI	AGGCCT	1 cut(s)	1385
PcsI	WCGNNNNNNNCGW	1 cut(s)	2269
PctI	GAATGC	3 cut(s)	970, 1251, 2144
PfeI	GAWTC	7 cut(s)	21, 173, 320, 401, 476, 1451, 2138
PflMI	CCANNNNNTGG	2 cut(s)	1904, 2066
PleI	GAGTC	2 cut(s)	203, 1345
PpsI	GAGTC	2 cut(s)	203, 1345
Ppu21I	YACGTR	2 cut(s)	482, 1427
PpuMI	RGGWCCY	1 cut(s)	1288
Psp124BI	GAGCTC	1 cut(s)	576
Psp1406I	AACGTT	1 cut(s)	1831
Psp5II	RGGWCCY	1 cut(s)	1288
Psp6I	CCWGG	4 cut(s)	129, 467, 607, 1002
PspGI	CCWGG	4 cut(s)	129, 467, 607, 1002
PspN4I	GGNNCC	3 cut(s)	1000, 1226, 2407
PspPI	GGNCC	3 cut(s)	1225, 1288, 1327
PspPPI	RGGWCCY	1 cut(s)	1288
PstI	CTGCAG	3 cut(s)	531, 1759, 1774
PstNI	CAGNNNCTG	3 cut(s)	665, 1064, 1778
PsuI	RGATCY	3 cut(s)	300, 1276, 1808
PvuII	CAGCTG	1 cut(s)	1760
RsaI	GTAC	9 cut(s)	396, 584, 723, 791, 1046, 1068, 1729, 1827, 2407
RsaNI	GTAC	9 cut(s)	395, 583, 722, 790, 1045, 1067, 1728, 1826, 2406
RseI	CAYNNNNRTG	2 cut(s)	1359, 1523
SacI	GAGCTC	1 cut(s)	576
SaqAI	TTAA	9 cut(s)	93, 371, 378, 597, 894, 1392, 1706, 2166, 2310
Sau3AI	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
Sau96I	GGNCC	3 cut(s)	1225, 1288, 1327
ScaI	AGTACT	2 cut(s)	584, 791
SchI	GAGTC	2 cut(s)	203, 1346
ScrFI	CCNGG	4 cut(s)	131, 469, 609, 1004
SduI	GDGCHC	2 cut(s)	238, 576
SexAI	ACCWGGT	1 cut(s)	129
SfaNI	GCATC	9 cut(s)	103, 235, 529, 820, 845, 1502, 1556, 1709, 2416
SfcI	CTRYAG	4 cut(s)	527, 1755, 1770, 1851
SinI	GGWCC	1 cut(s)	1288
SmiMI	CAYNNNNRTG	2 cut(s)	1359, 1523
SmlI	CTYRAG	2 cut(s)	377, 2156
SmoI	CTYRAG	2 cut(s)	377, 2156
SpeI	ACTAGT	2 cut(s)	905, 1730
SphI	GCATGC	1 cut(s)	1916
SseBI	AGGCCT	1 cut(s)	1385
SsiI	CCGC	9 cut(s)	201, 412, 547, 688, 747, 834, 1253, 2017, 2302
SspI	AATATT	1 cut(s)	1865
SstI	GAGCTC	1 cut(s)	576
StuI	AGGCCT	1 cut(s)	1385
StyD4I	CCNGG	4 cut(s)	129, 467, 607, 1002
StyI	CCWWGG	2 cut(s)	861, 1633
TaaI	ACNGT	6 cut(s)	650, 721, 794, 1066, 1522, 1999
TaiI	ACGT	6 cut(s)	40, 484, 937, 954, 1429, 1834
TaqI	TCGA	2 cut(s)	823, 1323
TaqII	GACCGA	1 cut(s)	718
TatI	WGTACW	5 cut(s)	394, 582, 789, 1044, 1825
TauI	GCSGC	2 cut(s)	749, 836
TfiI	GAWTC	7 cut(s)	21, 173, 320, 401, 476, 1451, 2138
Tru1I	TTAA	9 cut(s)	93, 371, 378, 597, 894, 1392, 1706, 2166, 2310
Tru9I	TTAA	9 cut(s)	93, 371, 378, 597, 894, 1392, 1706, 2166, 2310
TscAI	CASTG	3 cut(s)	1525, 1849, 2257
TseFI	GTSAC	5 cut(s)	989, 1310, 1516, 1525, 2273
Tsp45I	GTSAC	5 cut(s)	989, 1310, 1516, 1525, 2273
TspGWI	ACGGA	2 cut(s)	1084, 2434
TspRI	CASTG	3 cut(s)	1525, 1849, 2257
Van91I	CCANNNNNTGG	2 cut(s)	1904, 2066
Vha464I	CTTAAG	1 cut(s)	377
VpaK11BI	GGWCC	1 cut(s)	1288
XapI	RAATTY	6 cut(s)	46, 101, 879, 1873, 2294, 2333
XceI	RCATGY	1 cut(s)	1916
XmaJI	CCTAGG	1 cut(s)	1633
XmiI	GTMKAC	4 cut(s)	444, 857, 2131, 2416
ZrmI	AGTACT	2 cut(s)	584, 791
Zsp2I	ATGCAT	1 cut(s)	118

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.