Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0004764

Physical Location & Seq

Genomic Coordinates Reverse (-)

53710558 .. 53721541

Gene Structure 10984 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG304800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2373 bp

ATGCCTTTATGTACTTGTTCTCCGCTTCTTCCTCCTCCTCCAACGGTCAACAGTCATTCCCTTCCTCACCGCCGCGCGTATTCTTCATCCTCCATACGCCGTCGTTTCACCTCCCAAGCCAAACCCATTTTCTCCTTCCCGCCAAATTCCGCCAAGTTTTCCACAACACCGCTACTTCAATGCTCGTCCTCATTGCCCATGACTGCCGAACAAGACTCCTCTTCCGCCTCACATCCCCAGGTGCAGGGAAGCTTGTTGAAATCAAGGGCATTCTGGGTTAGTGAATCAATCATTGCCTGGAATGTGGATGCTGGAAATGATTCGTGCTACTTATTCGCTAGTGGAACTGCGGCGTTGTCATTAACGGGTGATGGAGTTTTGGGTGAGGATGTAAAAGTTCAGCTTCAAGAGGATAGACATGGGCTGCCGGAAAATGTGAAAACAAAGTTTCCTCATATCAAAGACTACAGAGCGTTTAGGGTCCCCCCTGATCTGGATGTCAGACCTCTTCTCAAAGCTCAGTTGGCAGTTGCTACTTTCAGTTCTGATGGAAGGTGCAGCGATGCTACTGGTCTGCAGTTACCGGGTGTTCTAGATGAATTGTTCTCATATGATGGTTCCCTTGGTGCAGTGTATTCAAAAGAAGCTGTGTCCCTTTACCTTTGGGCACCTACTTCTCAGGCAGTATCTGTATTGATCTATAAGGAGCCATCGGGTGGAAATCCCTTAGAAATTGTGCAGCTTGAGGAAGTTAATGGTATTTGGAGTACTAGAGGACCAAAAACTTGGGAAGGATGCTACTATCTGTATGAAGTGTCCGTATACCACCCTAGCACCTTACAAATTGAAAAGTGCTATGCAAATGATCCATATGCTAGAGGGCTCTCAGCAGATGGTAGGCGGACATTGTTCATCAATCTTGATTCTGATCATATAAAACCAGAAGGATGGGATAAATTGGTAGATGAGAAACCTGATATACATTCTTCTTCGGACATAAGTATTTACGAGTTGCACATAAGAGATTTCAGTGCCAATGACCAGACAGTGCTTCCTGAATTTCGCGGTGGATATCTGGCATTCACTTCGCAGGACTCGGCTGGCGTATCTCATTTGAAGAAATTATCAAATGCTGGTATCACTCATGTCCATCTACTGCCAGCCTACCAATTTGCAGGTGTTGATGATGAGAAGGGGAACTGGAAGAGTGTAGATTCCAAGATTCTTGAAAAGTTTCCTTCAGATTCATCCGAGCAACAAGCTCTAATTACAGCAATCCAAAATGATGATGGGTACAACTGGGGGTACAACCCTGTCCTTTGGGGGGTCCCTAAAGGAAGCTATGCAAGTAATGCAAATGGTTCATACCGGGCAATTGAGTTTAGGAAGATGGTTCAGGCACTTAATCGTTTTGGCCTTCGTGTTGTCTTGGATGTTGTCTACAATCATTTGCATGGAAGTGGGCCATTTGATGAAAATTCAGTTCTTGATAAGATTGTTCCAGGTTACTACTTGAGAAGAAACACTGATGGTTTTATTGAGAATAGCACATGTGTAAACAACACTGCTAGCGAGCATTTCATGGTAGAGCGTTTAATTCTTGATGATCTTTTGCACTGGGCAGTTGATTTTAAGGTTGATGGATTCCGGTTTGACCTTATGGGTCATATAATGAAAAGAACAATGGTGAAAGCAAAAGATGCGCTTTGCAGCCTAACAAAGGATAGGGATGGAGTTGATGGCTCAAGTATCTATATATATGGTGAAGGATGGGATTTTGGTGAAGTGGCCAACAATGGGCGTGGAGTAAATGCATCGCAGCTCAATATTTGTGGTACTGGAATTGGGAGTTTTAATGATCGAATACGGGATGCAATACTGGGTGGTTCTCCATTTGGCCATCCTCTTCAGCAAGGATTTGTGACTGGTCTACTATTACAGCCTAATGGTTACGATCATGGCCCAGAAGTTGTTGCAGAACGTATGCTTGCCGAATCAAAGGATCACATTCAGGTTGGTATGGCTGCAAACTTGAGGGACTTTGTGCTAACCAATTATGAAGGGAAAGAGGTAAAAGGATCAGAAGTATTGACATATGGTGGGACAAGTGTAGCATATGCTTTGGACCCTACTGAAACTGTTAATTATGCTTCAGCTCATGACAACGAAACTCTTTTTGACATCGTGAGTCTGAAGACTCCATTTGAAATTTCTGTCGAAGAGAGATGCAGGATAAATCTCTTGGCGTCAAGCATAATAGCACTATCACAGGGAATTCCATTTTTCCACTCCGGTGATGAGATGCTCCGGTCCAAATCACTTGATCGCGACTCATACAATTCTGGTGATTGGTTCAACAGGTCTTCCTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0005983 GO:0006073 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009250 GO:0009251 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010303 GO:0016051 GO:0016052 GO:0016787 GO:0016798 GO:0019252 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051060 GO:0071704 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM_48 DUF3372

Protein Analysis

790

Amino Acids

87.19

Weight (kDa)

5.35

Isoelectric Point (pI)

39.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pullulanase_N2	PF17967	87 - 200	2.3e-33	Pullulanase N2 domain
CBM_48	PF02922	208 - 292	8.5e-07	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04360 AT5G04360
fragaria_vesca	FvH4_7g18370 FvH4_7g18370 FvH4_7g18370 FvH4_7g18370 FvH4_7g18370 FvH4_7g18370 FvH4_7g18370 FvH4_7g18370 FvH4_7g18370
malus_domestica	MD01G1100100.v1.1
prunus_persica	Prupe.2G205800_v2.0.a1 Prupe.2G205800_v2.0.a1 Prupe.2G205800_v2.0.a1 Prupe.2G205800_v2.0.a1 Prupe.2G205800_v2.0.a1
pyrus_communis	pycom01g12720
rosa_chinensis	RchiOBHm_Chr1g0362181
rosa_laevigata	RLG00000027669
rosa_multiflora	Rmu_sc0002133.1_g000006
rosa_roxburghii	Rroxscaffold_4G00294460
rosa_rugosa	Rorug01G0294900 Rorug01G0295000 Rorug01G0295100 Rorug01G0295200
rosa_samantha	Rh1AG304800 Rh1BG267600 Rh1CG285800 Rh1DG297600
rosa_wichuraiana	Rw1G027110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1166
Acc36I	ACCTGC	1 cut(s)	1166
AccB1I	GGYRCC	1 cut(s)	667
AccB7I	CCANNNNNTGG	1 cut(s)	716
AccI	GTMKAC	3 cut(s)	822, 1440, 1930
AccII	CGCG	4 cut(s)	75, 77, 1065, 2328
AclWI	GGATC	3 cut(s)	860, 2010, 2086
AcoI	YGGCCR	2 cut(s)	1788, 1897
AcsI	RAATTY	5 cut(s)	145, 1058, 1477, 2208, 2274
AcuI	CTGAAG	4 cut(s)	1224, 1892, 2136, 2213
AcyI	GRCGYC	1 cut(s)	2246
AfaI	GTAC	5 cut(s)	13, 769, 1295, 1307, 1837
AfiI	CCNNNNNNNGG	6 cut(s)	244, 493, 716, 1324, 1720, 1797
AflIII	ACRYGT	1 cut(s)	1550
AgsI	TTSAA	9 cut(s)	179, 259, 407, 639, 848, 1117, 1229, 2207, 2356
AjnI	CCWGG	3 cut(s)	237, 296, 1501
AjuI	GAANNNNNNNTTGG	2 cut(s)	113, 145
AleI	CACNNNNGTG	1 cut(s)	2292
AluBI	AGCT	9 cut(s)	252, 403, 518, 647, 742, 1262, 1341, 1822, 2156
AluI	AGCT	9 cut(s)	252, 403, 518, 647, 742, 1262, 1341, 1822, 2156
AlwI	GGATC	3 cut(s)	860, 2010, 2086
AlwNI	CAGNNNCTG	1 cut(s)	689
AoxI	GGCC	5 cut(s)	1414, 1463, 1788, 1897, 1960
ApeKI	GCWGC	6 cut(s)	424, 558, 739, 1710, 1819, 2024
ApoI	RAATTY	5 cut(s)	145, 1058, 1477, 2208, 2274
Asp700I	GAANNNNTTC	2 cut(s)	319, 1233
AspLEI	GCGC	2 cut(s)	77, 1705
AspS9I	GGNCC	7 cut(s)	481, 776, 1327, 1463, 1961, 2125, 2310
AsuC2I	CCSGG	2 cut(s)	585, 1370
AsuHPI	GGTGA	9 cut(s)	59, 100, 380, 395, 1699, 1775, 1793, 2306, 2357
AsuNHI	GCTAGC	1 cut(s)	1568
AvaII	GGWCC	5 cut(s)	481, 776, 1327, 2125, 2310
BaeGI	GKGCMC	1 cut(s)	670
BalI	TGGCCA	2 cut(s)	1790, 1899
BanI	GGYRCC	1 cut(s)	667
BanII	GRGCYC	1 cut(s)	885
BbsI	GAAGAC	2 cut(s)	2201, 2355
BbvI	GCAGC	6 cut(s)	411, 570, 751, 1722, 1831, 2011
BceAI	ACGGC	1 cut(s)	84
BcgI	CGANNNNNNTGC	2 cut(s)	1068, 1102
BciT130I	CCWGG	3 cut(s)	239, 298, 1503
BclI	TGATCA	1 cut(s)	928
BcnI	CCSGG	2 cut(s)	585, 1370
BfaI	CTAG	6 cut(s)	339, 593, 771, 831, 876, 1569
BfmI	CTRYAG	2 cut(s)	466, 575
BfuAI	ACCTGC	1 cut(s)	1166
BisI	GCNGC	8 cut(s)	73, 351, 425, 559, 740, 1711, 1820, 2025
BlsI	GCNGC	8 cut(s)	74, 352, 426, 560, 741, 1712, 1821, 2026
BmcAI	AGTACT	1 cut(s)	769
Bme1390I	CCNGG	5 cut(s)	239, 298, 585, 1370, 1503
Bme18I	GGWCC	5 cut(s)	481, 776, 1327, 2125, 2310
BmgT120I	GGNCC	7 cut(s)	481, 776, 1327, 1463, 1961, 2125, 2310
BmiI	GGNNCC	8 cut(s)	482, 483, 619, 669, 708, 1328, 1329, 2127
BmrFI	CCNGG	5 cut(s)	239, 298, 585, 1370, 1503
BmrI	ACTGGG	3 cut(s)	1309, 1627, 1889
BmsI	GCATC	8 cut(s)	298, 553, 785, 1690, 1823, 1861, 2216, 2292
BmtI	GCTAGC	1 cut(s)	1572
BmuI	ACTGGG	3 cut(s)	1309, 1627, 1889
BpiI	GAAGAC	2 cut(s)	2201, 2355
BpuEI	CTTGAG	4 cut(s)	764, 1534, 1729, 2053
BpuMI	CCSGG	2 cut(s)	585, 1370
BsaBI	GATNNNNATC	1 cut(s)	927
BsaHI	GRCGYC	1 cut(s)	2246
BsaJI	CCNNGG	2 cut(s)	237, 622
BsaWI	WCCGGW	3 cut(s)	1647, 2291, 2307
BsaXI	ACNNNNNCTCC	1 cut(s)	34
Bsc4I	CCNNNNNNNGG	6 cut(s)	244, 493, 716, 1324, 1720, 1797
Bse1I	ACTGG	7 cut(s)	574, 1205, 1304, 1622, 1843, 1884, 1930
Bse3DI	GCAATG	2 cut(s)	191, 291
Bse8I	GATNNNNATC	1 cut(s)	927
BseBI	CCWGG	3 cut(s)	239, 298, 1503
BseDI	CCNNGG	2 cut(s)	237, 622
BseJI	GATNNNNATC	1 cut(s)	927
BseLI	CCNNNNNNNGG	6 cut(s)	244, 493, 716, 1324, 1720, 1797
BseMI	GCAATG	2 cut(s)	191, 291
BseMII	CTCAG	3 cut(s)	533, 692, 900
BseNI	ACTGG	7 cut(s)	574, 1205, 1304, 1622, 1843, 1884, 1930
BseRI	GAGGAG	3 cut(s)	24, 27, 208
BseSI	GKGCMC	1 cut(s)	670
BseXI	GCAGC	6 cut(s)	411, 570, 751, 1722, 1831, 2011
BsgI	GTGCAG	4 cut(s)	263, 577, 648, 758
Bsh1236I	CGCG	4 cut(s)	75, 77, 1065, 2328
BshFI	GGCC	5 cut(s)	1416, 1465, 1790, 1899, 1962
BshNI	GGYRCC	1 cut(s)	667
BsiSI	CCGG	6 cut(s)	428, 584, 1369, 1648, 2292, 2308
BslFI	GGGAC	5 cut(s)	467, 637, 1313, 2051, 2116
BslI	CCNNNNNNNGG	6 cut(s)	244, 493, 716, 1324, 1720, 1797
BsmFI	GGGAC	5 cut(s)	467, 637, 1313, 2051, 2116
BsmI	GAATGC	2 cut(s)	269, 1079
BsnI	GGCC	5 cut(s)	1416, 1465, 1790, 1899, 1962
Bsp1286I	GDGCHC	2 cut(s)	670, 885
Bsp68I	TCGCGA	1 cut(s)	2328
BspANI	GGCC	5 cut(s)	1416, 1465, 1790, 1899, 1962
BspCNI	CTCAG	3 cut(s)	532, 691, 899
BspFNI	CGCG	4 cut(s)	75, 77, 1065, 2328
BspHI	TCATGA	1 cut(s)	2158
BspLI	GGNNCC	8 cut(s)	482, 483, 619, 669, 708, 1328, 1329, 2127
BspMAI	CTGCAG	1 cut(s)	579
BspMI	ACCTGC	1 cut(s)	1166
BspOI	GCTAGC	1 cut(s)	1572
BspPI	GGATC	3 cut(s)	860, 2010, 2086
BspT107I	GGYRCC	1 cut(s)	667
BsrDI	GCAATG	2 cut(s)	191, 291
BsrI	ACTGG	7 cut(s)	574, 1205, 1304, 1622, 1843, 1884, 1930
BssECI	CCNNGG	2 cut(s)	237, 622
BssNAI	GTATAC	1 cut(s)	823
BssNI	GRCGYC	1 cut(s)	2246
BssT1I	CCWWGG	1 cut(s)	622
Bst1107I	GTATAC	1 cut(s)	823
Bst2UI	CCWGG	3 cut(s)	239, 298, 1503
Bst4CI	ACNGT	4 cut(s)	46, 53, 1048, 2140
Bst6I	CTCTTC	5 cut(s)	226, 513, 1199, 1911, 2214
BstACI	GRCGYC	1 cut(s)	2246
BstAPI	GCANNNNNTGC	2 cut(s)	1352, 1700
BstC8I	GCNNGC	5 cut(s)	1102, 1161, 1570, 1574, 1989
BstDEI	CTNAG	4 cut(s)	519, 678, 727, 886
BstENI	CCTNNNNNAGG	1 cut(s)	1718
BstFNI	CGCG	4 cut(s)	75, 77, 1065, 2328
BstHHI	GCGC	2 cut(s)	77, 1705
BstMWI	GCNNNNNNNGC	3 cut(s)	524, 1352, 1700
BstNI	CCWGG	3 cut(s)	239, 298, 1503
BstNSI	RCATGY	1 cut(s)	1554
BstSCI	CCNGG	5 cut(s)	237, 296, 583, 1368, 1501
BstSFI	CTRYAG	2 cut(s)	466, 575
BstSLI	GKGCMC	1 cut(s)	670
BstUI	CGCG	4 cut(s)	75, 77, 1065, 2328
BstV1I	GCAGC	6 cut(s)	411, 570, 751, 1722, 1831, 2011
BstV2I	GAAGAC	2 cut(s)	2201, 2355
BstXI	CCANNNNNNTGG	2 cut(s)	786, 948
BstZ17I	GTATAC	1 cut(s)	823
BsuRI	GGCC	5 cut(s)	1416, 1465, 1790, 1899, 1962
BtgZI	GCGATG	2 cut(s)	576, 1800
BtsI	GCAGTG	2 cut(s)	636, 1563
BtsIMutI	CAGTG	6 cut(s)	636, 1036, 1053, 1524, 1563, 1615
BtuMI	TCGCGA	1 cut(s)	2328
BveI	ACCTGC	1 cut(s)	1166
Cac8I	GCNNGC	5 cut(s)	1102, 1161, 1570, 1574, 1989
CaiI	CAGNNNCTG	1 cut(s)	689
CciI	TCATGA	1 cut(s)	2158
CfoI	GCGC	2 cut(s)	77, 1705
Cfr13I	GGNCC	7 cut(s)	481, 776, 1327, 1463, 1961, 2125, 2310
CseI	GACGC	1 cut(s)	2235
Csp6I	GTAC	5 cut(s)	12, 768, 1294, 1306, 1836
CspCI	CAANNNNNGTGG	4 cut(s)	1783, 1813, 1818, 1848
CviAII	CATG	8 cut(s)	199, 419, 1145, 1454, 1551, 1582, 1958, 2159
CviQI	GTAC	5 cut(s)	12, 768, 1294, 1306, 1836
DdeI	CTNAG	4 cut(s)	519, 678, 727, 886
EaeI	YGGCCR	2 cut(s)	1788, 1897
Eam1104I	CTCTTC	5 cut(s)	226, 513, 1199, 1911, 2214
EarI	CTCTTC	5 cut(s)	226, 513, 1199, 1911, 2214
EciI	GGCGGA	3 cut(s)	139, 214, 916
Eco130I	CCWWGG	1 cut(s)	622
Eco24I	GRGCYC	1 cut(s)	885
Eco32I	GATATC	1 cut(s)	1073
Eco47I	GGWCC	5 cut(s)	481, 776, 1327, 2125, 2310
Eco57I	CTGAAG	4 cut(s)	1224, 1892, 2136, 2213
EcoNI	CCTNNNNNAGG	1 cut(s)	1718
EcoO109I	RGGNCCY	2 cut(s)	481, 1327
EcoRI	GAATTC	1 cut(s)	2274
EcoRII	CCWGG	3 cut(s)	237, 296, 1501
EcoRV	GATATC	1 cut(s)	1073
EcoT14I	CCWWGG	1 cut(s)	622
EcoT22I	ATGCAT	1 cut(s)	1816
EcoT38I	GRGCYC	1 cut(s)	885
ErhI	CCWWGG	1 cut(s)	622
FaeI	CATG	8 cut(s)	202, 422, 1148, 1457, 1554, 1585, 1961, 2162
FalI	AAGNNNNNCTT	4 cut(s)	387, 419, 1689, 1721
FaqI	GGGAC	5 cut(s)	467, 637, 1313, 2051, 2116
FatI	CATG	8 cut(s)	198, 418, 1144, 1453, 1550, 1581, 1957, 2158
FauI	CCCGC	1 cut(s)	147
FauNDI	CATATG	4 cut(s)	610, 871, 2095, 2116
FbaI	TGATCA	1 cut(s)	928
FblI	GTMKAC	3 cut(s)	822, 1440, 1930
Fnu4HI	GCNGC	8 cut(s)	73, 351, 425, 559, 740, 1711, 1820, 2025
FriOI	GRGCYC	1 cut(s)	885
Fsp4HI	GCNGC	8 cut(s)	73, 351, 425, 559, 740, 1711, 1820, 2025
FspBI	CTAG	6 cut(s)	339, 593, 771, 831, 876, 1569
GlaI	GCGC	2 cut(s)	76, 1704
GluI	GCNGC	8 cut(s)	73, 351, 425, 559, 740, 1711, 1820, 2025
HaeIII	GGCC	5 cut(s)	1416, 1465, 1790, 1899, 1962
HapII	CCGG	6 cut(s)	428, 584, 1369, 1648, 2292, 2308
HgaI	GACGC	1 cut(s)	2235
HhaI	GCGC	2 cut(s)	77, 1705
Hin1I	GRCGYC	1 cut(s)	2246
Hin1II	CATG	8 cut(s)	202, 422, 1148, 1457, 1554, 1585, 1961, 2162
Hin6I	GCGC	2 cut(s)	75, 1703
HinP1I	GCGC	2 cut(s)	75, 1703
HincII	GTYRAC	1 cut(s)	49
HindII	GTYRAC	1 cut(s)	49
HindIII	AAGCTT	1 cut(s)	250
HpaII	CCGG	6 cut(s)	428, 584, 1369, 1648, 2292, 2308
HphI	GGTGA	9 cut(s)	59, 100, 380, 395, 1699, 1775, 1793, 2306, 2357
Hpy166II	GTNNAC	5 cut(s)	49, 823, 1441, 1558, 1931
Hpy188I	TCNGA	8 cut(s)	503, 547, 928, 994, 1243, 1252, 2083, 2193
Hpy8I	GTNNAC	5 cut(s)	49, 823, 1441, 1558, 1931
Hpy99I	CGWCG	1 cut(s)	105
HpyCH4III	ACNGT	4 cut(s)	46, 53, 1048, 2140
HpyCH4IV	ACGT	1 cut(s)	1981
HpyF10VI	GCNNNNNNNGC	3 cut(s)	524, 1352, 1700
HpyF3I	CTNAG	4 cut(s)	519, 678, 727, 886
HpySE526I	ACGT	1 cut(s)	1981
Hsp92I	GRCGYC	1 cut(s)	2246
Hsp92II	CATG	8 cut(s)	202, 422, 1148, 1457, 1554, 1585, 1961, 2162
HspAI	GCGC	2 cut(s)	75, 1703
KflI	GGGWCCC	2 cut(s)	481, 1327
Ksp22I	TGATCA	1 cut(s)	928
LmnI	GCTCC	2 cut(s)	706, 2310
Lsp1109I	GCAGC	6 cut(s)	411, 570, 751, 1722, 1831, 2011
LweI	GCATC	8 cut(s)	298, 553, 785, 1690, 1823, 1861, 2216, 2292
MaeI	CTAG	6 cut(s)	339, 593, 771, 831, 876, 1569
MaeII	ACGT	1 cut(s)	1981
MaeIII	GTNAC	4 cut(s)	579, 1505, 1921, 1949
MfeI	CAATTG	1 cut(s)	1374
MhlI	GDGCHC	2 cut(s)	670, 885
MlsI	TGGCCA	2 cut(s)	1790, 1899
MluNI	TGGCCA	2 cut(s)	1790, 1899
MlyI	GAGTC	5 cut(s)	209, 1088, 2191, 2197, 2324
MmeI	TCCRAC	1 cut(s)	65
Mox20I	TGGCCA	2 cut(s)	1790, 1899
Mph1103I	ATGCAT	1 cut(s)	1816
MroXI	GAANNNNTTC	2 cut(s)	319, 1233
MscI	TGGCCA	2 cut(s)	1790, 1899
MseI	TTAA	7 cut(s)	362, 753, 1404, 1595, 1632, 1854, 2142
MslI	CAYNNNNRTG	3 cut(s)	1452, 1458, 2292
Msp20I	TGGCCA	2 cut(s)	1790, 1899
MspI	CCGG	6 cut(s)	428, 584, 1369, 1648, 2292, 2308
MspR9I	CCNGG	5 cut(s)	239, 298, 585, 1370, 1503
MunI	CAATTG	1 cut(s)	1374
Mva1269I	GAATGC	2 cut(s)	269, 1079
MvaI	CCWGG	3 cut(s)	239, 298, 1503
MvnI	CGCG	4 cut(s)	75, 77, 1065, 2328
MwoI	GCNNNNNNNGC	3 cut(s)	524, 1352, 1700
NciI	CCSGG	2 cut(s)	585, 1370
NdeI	CATATG	4 cut(s)	610, 871, 2095, 2116
NheI	GCTAGC	1 cut(s)	1568
NlaIII	CATG	8 cut(s)	202, 422, 1148, 1457, 1554, 1585, 1961, 2162
NlaIV	GGNNCC	8 cut(s)	482, 483, 619, 669, 708, 1328, 1329, 2127
NmeAIII	GCCGAG	1 cut(s)	1076
NmuCI	GTSAC	1 cut(s)	1921
NruI	TCGCGA	1 cut(s)	2328
NsiI	ATGCAT	1 cut(s)	1816
NspI	RCATGY	1 cut(s)	1554
OliI	CACNNNNGTG	1 cut(s)	2292
PagI	TCATGA	1 cut(s)	2158
PaqCI	CACCTGC	1 cut(s)	1166
PciI	ACATGT	1 cut(s)	1550
PctI	GAATGC	2 cut(s)	269, 1079
PdmI	GAANNNNTTC	2 cut(s)	319, 1233
PfeI	GAWTC	8 cut(s)	284, 320, 923, 1214, 1222, 1244, 1644, 1994
PflMI	CCANNNNNTGG	1 cut(s)	716
PkrI	GCNGC	8 cut(s)	74, 352, 426, 560, 741, 1712, 1821, 2026
PleI	GAGTC	5 cut(s)	209, 1088, 2191, 2196, 2324
PpsI	GAGTC	5 cut(s)	209, 1088, 2191, 2196, 2324
PpuMI	RGGWCCY	2 cut(s)	481, 1327
PscI	ACATGT	1 cut(s)	1550
Psp5II	RGGWCCY	2 cut(s)	481, 1327
Psp6I	CCWGG	3 cut(s)	237, 296, 1501
PspGI	CCWGG	3 cut(s)	237, 296, 1501
PspN4I	GGNNCC	8 cut(s)	482, 483, 619, 669, 708, 1328, 1329, 2127
PspPI	GGNCC	7 cut(s)	481, 776, 1327, 1463, 1961, 2125, 2310
PspPPI	RGGWCCY	2 cut(s)	481, 1327
PstI	CTGCAG	1 cut(s)	579
PstNI	CAGNNNCTG	1 cut(s)	689
RruI	TCGCGA	1 cut(s)	2328
RsaI	GTAC	5 cut(s)	13, 769, 1295, 1307, 1837
RsaNI	GTAC	5 cut(s)	12, 768, 1294, 1306, 1836
RseI	CAYNNNNRTG	3 cut(s)	1452, 1458, 2292
SaqAI	TTAA	7 cut(s)	362, 753, 1404, 1595, 1632, 1854, 2142
SatI	GCNGC	8 cut(s)	73, 351, 425, 559, 740, 1711, 1820, 2025
Sau96I	GGNCC	7 cut(s)	481, 776, 1327, 1463, 1961, 2125, 2310
ScaI	AGTACT	1 cut(s)	769
SchI	GAGTC	5 cut(s)	209, 1088, 2191, 2197, 2324
ScrFI	CCNGG	5 cut(s)	239, 298, 585, 1370, 1503
SduI	GDGCHC	2 cut(s)	670, 885
SfaNI	GCATC	8 cut(s)	298, 553, 785, 1690, 1823, 1861, 2216, 2292
SfcI	CTRYAG	2 cut(s)	466, 575
SinI	GGWCC	5 cut(s)	481, 776, 1327, 2125, 2310
SmiMI	CAYNNNNRTG	3 cut(s)	1452, 1458, 2292
SmlI	CTYRAG	4 cut(s)	743, 1513, 1744, 2032
SmoI	CTYRAG	4 cut(s)	743, 1513, 1744, 2032
SspI	AATATT	1 cut(s)	1828
SspMI	CTAG	6 cut(s)	339, 593, 771, 831, 876, 1569
StyD4I	CCNGG	5 cut(s)	237, 296, 583, 1368, 1501
StyI	CCWWGG	1 cut(s)	622
TaaI	ACNGT	4 cut(s)	46, 53, 1048, 2140
TaiI	ACGT	1 cut(s)	1984
TaqI	TCGA	2 cut(s)	1861, 2217
TatI	WGTACW	2 cut(s)	11, 767
TauI	GCSGC	2 cut(s)	75, 353
TfiI	GAWTC	8 cut(s)	284, 320, 923, 1214, 1222, 1244, 1644, 1994
Tru1I	TTAA	7 cut(s)	362, 753, 1404, 1595, 1632, 1854, 2142
Tru9I	TTAA	7 cut(s)	362, 753, 1404, 1595, 1632, 1854, 2142
TscAI	CASTG	6 cut(s)	636, 1036, 1053, 1531, 1570, 1622
TseFI	GTSAC	1 cut(s)	1921
TseI	GCWGC	6 cut(s)	424, 558, 739, 1710, 1819, 2024
Tsp45I	GTSAC	1 cut(s)	1921
TspGWI	ACGGA	1 cut(s)	808
TspRI	CASTG	6 cut(s)	636, 1036, 1053, 1531, 1570, 1622
Van91I	CCANNNNNTGG	1 cut(s)	716
VpaK11BI	GGWCC	5 cut(s)	481, 776, 1327, 2125, 2310
XagI	CCTNNNNNAGG	1 cut(s)	1718
XapI	RAATTY	5 cut(s)	145, 1058, 1477, 2208, 2274
XbaI	TCTAGA	1 cut(s)	592
XceI	RCATGY	1 cut(s)	1554
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1286
XmiI	GTMKAC	3 cut(s)	822, 1440, 1930
XmnI	GAANNNNTTC	2 cut(s)	319, 1233
XspI	CTAG	6 cut(s)	339, 593, 771, 831, 876, 1569
ZrmI	AGTACT	1 cut(s)	769
Zsp2I	ATGCAT	1 cut(s)	1816

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.