Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0006647

Physical Location & Seq

Genomic Coordinates Forward (+)

48623304 .. 48627019

Gene Structure 3716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0372900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGGTCATGGATCAAGCCTTGAGTGAGTTGTTGGAATTCAGGGATCAAGCTCTTTCGGACTCGATGTATAAGAAACTAGATAGTGGAATCGGGAACGGTAGTGGTTCAAGTAAGGTACTTGGACATAAGTATGCTACTACGGTCCGAGTGCCTCCTACTCAAATTCCTAGTGATTTAGCGCCGCATTTGAGCATGAATTCAGATGGGGATTCACAGGAAGATTGTGATTTTAGTGATGTGGTTCTCAAGTACATTAGCCAGATGCTTATGGAAGAAGATATGGAAGAAAAAACTTGCATGTATCAGGAGTCTGCAGCACTTCATGCTGCAGAGCAATCTTTTTATGAGCTTATTGGAGAGAAGCATCCTCTGCCGCCTGATTTGACTCCTGCTGCTGATCAGATCCATGAAAGCCCAGATGAAAGTCATTCTTTACATTCCAGCTGTTGTAGCACTACCTCTACCAGTACTAGTAGTAGCATTAGGGATTGTGATTTGCGTGAGTTTAAGTCTCTCAATGTTGCTTCTCAGTCGACTTCTCAGTCATCCCATGCTTCATCACATGGAACCAGTAACATTGTAGATGGGTTTGTGGATTCTCCTGTGAGCACTCTTAGGGTTCCTGACTTTTTCAATGAGACTGATTCAATTATGCAGTTTAAGAAAGGGTTCGAGGAAGCGAGTAAGTTTCTTCCAAATGGTAATAGTCTAATTGTTGATTTGGAGAGTAATACACTGTTGCTTAAAGAGCTGAAGGCAGACGCAACAGATATGCTAGTGAAGGTAGACCAGAAGAATGACAGTGAGTACTCTTCTGCTGGGTCAAGGAGAAAGAAGCATTCTTATCATGACGATGTGCTTTTAGAAGGGGAAAGGAGTAACAAGCAATCATCAGTTTCTACTGAATCAGCTGTGAGTCCGGAAATGTTTGACATGGTTTTGCTAAACTGTGGACAGGGTGAATCTGCTCTTCGCGAAGCTTTGCAGAATGGAACAAAAAAGAACAAACCACAAAATGGTCAGTCAAAGGGGCCGAGTGGTGGAAAATCCCGTGGGAAGAAGCAGGGAGGTAAAAAGGACGTGGTGGATTTGAGAACTCTTTTGACGGTCTGTGCACAAGCTATTGCAGCTGGTGATGAGAGAACTGGCAACGACTTACTTAAGCGGATCAGACAGCATGCTTCTCCGGTGGGAGATGGGATGCAAAGAATGGCTTGCTGTTTTGCTGATGGTCTTGAGGCACGAATGGCTGGATCTGGTACTCAGATTTACAGAGCCCTTATAACCAAGCCAACATCAGCTGCAGATGTCTTGAAGGCTTACCATCTATTTCTCGCCGCTTGTCCATTCAAGAAGCTATCAAATTTCTTCTCAAATAAGACAATAATGAATGTATCCGAGAAAGCAACAAGGCTCCACATTATTGATTTCGGTATTATGTATGGTTTTCAATGGCCTTGCCTCATACAACGTCTCTCATCTAGGCCTGGTGGCCCTCCAAAGCTCCGAATTACTGGGATCGATTTTCCAAATCCAGGTTTCCGACCAGCGGAAAGGGTTGAGGAGACAGGACGACGCTTAGCAAACTATGCAGAAACTTTTAAAGTTCCATTTGAGTTCAACGCCATAGCACAAAAGTGGGACACCATTCAAATTGAGGATCTTAAACTCGATCGTGATGAGGTGCTTGTTGTGAATTCTATTTACAGACTTAGAAACCTACTTGATGAGACTGTGGTGGTAGAGAGTCCAAGAGATATTGTCCTGAACCTGATAAGGAAGATGAATCCAGATGTCTACATACTTGGAGTTGTAAATGGAGCCTACAGTGCCCCCTTCTTTCTTTCAAGATTTCGTGAGGCTCTCTTCCACTTCTCTACATTGTTTGACATGCTTGACATGTGTGTGCCCCGTGATATTCCAGAGCGGATGTTGATTGAGAGGGAGATATTTGGCCGGGAGGCAATGAATGTCATTGCGTGTGAGGGTTCAGAGAGGATTGAAAGACCAGAAACATACAAGCAGTGGCAGGTGAGGAATCGGAGGGCTGGTCTTACACAACTTCCTTTGAACCAGGAGATCATGAGCATAGCAAAGGACAGATTGCATGCTTACTACCACAAGGATTTTGTAATTGATGAAGATGGCCGGTGGCTCTTGCAGGGATGGAAAGGACGCATTGTCTATGCACTCTCTTCTTGGAGGGCTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0010287 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1

Protein Analysis

737

Amino Acids

82.38

Weight (kDa)

5.87

Isoelectric Point (pI)

47.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	364 - 735	2e-121	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006647)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05200
fragaria_vesca	FvH4_7g26150 FvH4_7g26150 FvH4_7g26150 FvH4_7g26150
malus_domestica	MD01G1169500.v1.1 MD07G1235400.v1.1
prunus_persica	Prupe.2G265700_v2.0.a1
pyrus_communis	pycom01g18220 pycom01g18230 pycom07g21290 pycom07g21300
rosa_chinensis	RchiOBHm_Chr1g0372581
rosa_laevigata	RLG00000026889
rosa_multiflora	Rmu_ssc0000419.1_g000011
rosa_roxburghii	Rroxscaffold_4G00284830
rosa_rugosa	Rorug01G0372900 Rorug01G0372900 Rorug01G0373000 Rorug01G0373100 Rorug01G0373200.1
rosa_samantha	Rh1AG381500 Rh1BG344900 Rh1CG358300 Rh1DG376100
rosa_wichuraiana	Rw1G033550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1283
AarI	CACCTGC	1 cut(s)	2020
AasI	GACNNNNNNGTC	1 cut(s)	541
Acc36I	ACCTGC	1 cut(s)	2020
AccB7I	CCANNNNNTGG	1 cut(s)	1016
AccBSI	CCGCTC	1 cut(s)	1927
AccI	GTMKAC	3 cut(s)	533, 786, 1797
AccII	CGCG	1 cut(s)	975
AccIII	TCCGGA	1 cut(s)	919
AciI	CCGC	6 cut(s)	182, 374, 1165, 1338, 1550, 1927
AclWI	GGATC	7 cut(s)	18, 51, 397, 1175, 1261, 1526, 1668
AcoI	YGGCCR	2 cut(s)	1954, 2146
AcsI	RAATTY	5 cut(s)	35, 162, 196, 1363, 1696
AcuI	CTGAAG	1 cut(s)	773
AfaI	GTAC	5 cut(s)	117, 251, 469, 809, 1261
AfiI	CCNNNNNNNGG	4 cut(s)	1016, 1040, 1535, 1549
AflII	CTTAAG	1 cut(s)	1160
AflIII	ACRYGT	1 cut(s)	1899
AhdI	GACNNNNNGTC	1 cut(s)	2180
AhlI	ACTAGT	1 cut(s)	470
AjiI	CACGTC	1 cut(s)	1081
AjnI	CCWGG	3 cut(s)	1486, 1534, 2073
AleI	CACNNNNGTG	1 cut(s)	1636
Alw21I	GWGCWC	2 cut(s)	611, 1117
Alw26I	GTCTC	5 cut(s)	516, 632, 1478, 1559, 1724
Alw44I	GTGCAC	1 cut(s)	1113
AlwI	GGATC	7 cut(s)	18, 51, 397, 1175, 1261, 1526, 1668
Aor13HI	TCCGGA	1 cut(s)	919
AoxI	GGCC	6 cut(s)	1031, 1454, 1484, 1492, 1954, 2146
ApaLI	GTGCAC	1 cut(s)	1113
ApeKI	GCWGC	6 cut(s)	314, 326, 392, 1127, 1301, 2207
ApoI	RAATTY	5 cut(s)	35, 162, 196, 1363, 1696
Asp700I	GAANNNNTTC	1 cut(s)	668
AspLEI	GCGC	1 cut(s)	181
AspS9I	GGNCC	3 cut(s)	142, 1031, 1493
AsuC2I	CCSGG	1 cut(s)	1958
AsuHPI	GGTGA	3 cut(s)	971, 1145, 2044
AvaII	GGWCC	1 cut(s)	142
BaeGI	GKGCMC	3 cut(s)	1117, 1834, 1911
BanII	GRGCYC	1 cut(s)	1279
Bbv12I	GWGCWC	2 cut(s)	611, 1117
BbvI	GCAGC	6 cut(s)	313, 326, 379, 1139, 1288, 2194
BccI	CCATC	7 cut(s)	197, 578, 1190, 1223, 1332, 2138, 2160
BciT130I	CCWGG	3 cut(s)	1488, 1536, 2075
BciVI	GTATCC	1 cut(s)	1405
BclI	TGATCA	1 cut(s)	397
BcnI	CCSGG	1 cut(s)	1958
BcoDI	GTCTC	5 cut(s)	516, 632, 1478, 1559, 1724
BcuI	ACTAGT	1 cut(s)	470
BfaI	CTAG	5 cut(s)	77, 168, 471, 776, 1482
BfmI	CTRYAG	4 cut(s)	312, 327, 1302, 1825
BfoI	RGCGCY	1 cut(s)	182
BfrI	CTTAAG	1 cut(s)	1160
BfuAI	ACCTGC	1 cut(s)	2020
BfuI	GTATCC	1 cut(s)	1405
BisI	GCNGC	9 cut(s)	182, 315, 327, 374, 393, 1128, 1302, 1338, 2208
BlpI	GCTNAGC	1 cut(s)	1579
BlsI	GCNGC	9 cut(s)	183, 316, 328, 375, 394, 1129, 1303, 1339, 2209
BmcAI	AGTACT	2 cut(s)	469, 809
Bme1390I	CCNGG	4 cut(s)	1488, 1536, 1958, 2075
Bme18I	GGWCC	1 cut(s)	142
BmeRI	GACNNNNNGTC	1 cut(s)	2180
BmgBI	CACGTC	1 cut(s)	1081
BmgT120I	GGNCC	3 cut(s)	142, 1031, 1493
BmiI	GGNNCC	5 cut(s)	568, 621, 1032, 1415, 1822
BmrFI	CCNGG	4 cut(s)	1488, 1536, 1958, 2075
BmrI	ACTGGG	1 cut(s)	1524
BmsI	GCATC	3 cut(s)	252, 373, 1191
BmuI	ACTGGG	1 cut(s)	1524
Bpu1102I	GCTNAGC	1 cut(s)	1579
BpuEI	CTTGAG	3 cut(s)	40, 230, 1256
BpuMI	CCSGG	1 cut(s)	1958
Bsa29I	ATCGAT	1 cut(s)	1521
BsaJI	CCNNGG	1 cut(s)	1051
BsaWI	WCCGGW	2 cut(s)	919, 1186
BsaXI	ACNNNNNCTCC	2 cut(s)	2035, 2065
Bsc4I	CCNNNNNNNGG	4 cut(s)	1016, 1040, 1535, 1549
Bse118I	RCCGGY	1 cut(s)	2148
Bse1I	ACTGG	4 cut(s)	465, 570, 1150, 1519
Bse3DI	GCAATG	2 cut(s)	1971, 1974
BseAI	TCCGGA	1 cut(s)	919
BseBI	CCWGG	3 cut(s)	1488, 1536, 2075
BseCI	ATCGAT	1 cut(s)	1521
BseDI	CCNNGG	1 cut(s)	1051
BseGI	GGATG	5 cut(s)	364, 545, 1206, 1935, 2171
BseLI	CCNNNNNNNGG	4 cut(s)	1016, 1040, 1535, 1549
BseMI	GCAATG	2 cut(s)	1971, 1974
BseMII	CTCAG	3 cut(s)	542, 554, 1277
BseNI	ACTGG	4 cut(s)	465, 570, 1150, 1519
BseRI	GAGGAG	1 cut(s)	1577
BseSI	GKGCMC	3 cut(s)	1117, 1834, 1911
BseXI	GCAGC	6 cut(s)	313, 326, 379, 1139, 1288, 2194
BseYI	CCCAGC	1 cut(s)	818
Bsh1236I	CGCG	1 cut(s)	975
Bsh1285I	CGRYCG	1 cut(s)	1675
BshFI	GGCC	6 cut(s)	1033, 1456, 1486, 1494, 1956, 2148
BshVI	ATCGAT	1 cut(s)	1521
BsiEI	CGRYCG	1 cut(s)	1675
BsiHKAI	GWGCWC	2 cut(s)	611, 1117
BsiSI	CCGG	4 cut(s)	920, 1187, 1957, 2149
BslFI	GGGAC	1 cut(s)	1655
BslI	CCNNNNNNNGG	4 cut(s)	1016, 1040, 1535, 1549
BsmAI	GTCTC	5 cut(s)	516, 632, 1478, 1559, 1724
BsmBI	CGTCTC	1 cut(s)	1478
BsmFI	GGGAC	1 cut(s)	1655
BsmI	GAATGC	1 cut(s)	838
BsnI	GGCC	6 cut(s)	1033, 1456, 1486, 1494, 1956, 2148
Bsp1286I	GDGCHC	5 cut(s)	611, 1117, 1279, 1834, 1911
Bsp13I	TCCGGA	1 cut(s)	919
Bsp1720I	GCTNAGC	1 cut(s)	1579
Bsp68I	TCGCGA	1 cut(s)	975
BspACI	CCGC	6 cut(s)	182, 374, 1165, 1338, 1550, 1927
BspANI	GGCC	6 cut(s)	1033, 1456, 1486, 1494, 1956, 2148
BspCNI	CTCAG	3 cut(s)	541, 553, 1276
BspDI	ATCGAT	1 cut(s)	1521
BspEI	TCCGGA	1 cut(s)	919
BspFNI	CGCG	1 cut(s)	975
BspHI	TCATGA	2 cut(s)	847, 2082
BspLI	GGNNCC	5 cut(s)	568, 621, 1032, 1415, 1822
BspMAI	CTGCAG	3 cut(s)	316, 331, 1306
BspMI	ACCTGC	1 cut(s)	2020
BspPI	GGATC	7 cut(s)	18, 51, 397, 1175, 1261, 1526, 1668
BspQI	GCTCTTC	1 cut(s)	975
BspTI	CTTAAG	1 cut(s)	1160
BsrBI	CCGCTC	1 cut(s)	1927
BsrDI	GCAATG	2 cut(s)	1971, 1974
BsrFI	RCCGGY	1 cut(s)	2148
BsrI	ACTGG	4 cut(s)	465, 570, 1150, 1519
BssAI	RCCGGY	1 cut(s)	2148
BssECI	CCNNGG	1 cut(s)	1051
Bst2UI	CCWGG	3 cut(s)	1488, 1536, 2075
Bst4CI	ACNGT	8 cut(s)	98, 142, 738, 803, 950, 1108, 1735, 1829
Bst6I	CTCTTC	4 cut(s)	817, 975, 1871, 2200
BstAFI	CTTAAG	1 cut(s)	1160
BstAPI	GCANNNNNTGC	3 cut(s)	323, 370, 1589
BstC8I	GCNNGC	3 cut(s)	1179, 1216, 2109
BstDEI	CTNAG	7 cut(s)	528, 540, 614, 1263, 1579, 1712, 2211
BstDSI	CCRYGG	1 cut(s)	1051
BstF5I	GGATG	5 cut(s)	364, 545, 1206, 1935, 2171
BstFNI	CGCG	1 cut(s)	975
BstH2I	RGCGCY	1 cut(s)	182
BstHHI	GCGC	1 cut(s)	181
BstMAI	GTCTC	5 cut(s)	516, 632, 1478, 1559, 1724
BstMCI	CGRYCG	1 cut(s)	1675
BstMWI	GCNNNNNNNGC	8 cut(s)	323, 370, 450, 748, 1127, 1247, 1589, 1829
BstNI	CCWGG	3 cut(s)	1488, 1536, 2075
BstNSI	RCATGY	5 cut(s)	301, 1181, 1894, 1903, 2111
BstSCI	CCNGG	4 cut(s)	1486, 1534, 1956, 2073
BstSFI	CTRYAG	4 cut(s)	312, 327, 1302, 1825
BstSLI	GKGCMC	3 cut(s)	1117, 1834, 1911
BstUI	CGCG	1 cut(s)	975
BstV1I	GCAGC	6 cut(s)	313, 326, 379, 1139, 1288, 2194
BstX2I	RGATCY	3 cut(s)	402, 1253, 1660
BstYI	RGATCY	3 cut(s)	402, 1253, 1660
Bsu15I	ATCGAT	1 cut(s)	1521
BsuI	GTATCC	1 cut(s)	1405
BsuRI	GGCC	6 cut(s)	1033, 1456, 1486, 1494, 1956, 2148
BsuTUI	ATCGAT	1 cut(s)	1521
BtgI	CCRYGG	1 cut(s)	1051
BtrI	CACGTC	1 cut(s)	1081
BtsCI	GGATG	5 cut(s)	364, 545, 1206, 1935, 2171
BtsI	GCAGTG	1 cut(s)	2030
BtsIMutI	CAGTG	4 cut(s)	734, 808, 1834, 2030
BtuMI	TCGCGA	1 cut(s)	975
BveI	ACCTGC	1 cut(s)	2020
Cac8I	GCNNGC	3 cut(s)	1179, 1216, 2109
CciI	TCATGA	2 cut(s)	847, 2082
CfoI	GCGC	1 cut(s)	181
Cfr10I	RCCGGY	1 cut(s)	2148
Cfr13I	GGNCC	3 cut(s)	142, 1031, 1493
ClaI	ATCGAT	1 cut(s)	1521
CpoI	CGGWCCG	1 cut(s)	142
CseI	GACGC	3 cut(s)	770, 1584, 2184
Csp6I	GTAC	5 cut(s)	116, 250, 468, 808, 1260
CspI	CGGWCCG	1 cut(s)	142
CviQI	GTAC	5 cut(s)	116, 250, 468, 808, 1260
DdeI	CTNAG	7 cut(s)	528, 540, 614, 1263, 1579, 1712, 2211
DraI	TTTAAA	1 cut(s)	1603
DrdI	GACNNNNNNGTC	1 cut(s)	541
DriI	GACNNNNNGTC	1 cut(s)	2180
DseDI	GACNNNNNNGTC	1 cut(s)	541
EaeI	YGGCCR	2 cut(s)	1954, 2146
Eam1104I	CTCTTC	4 cut(s)	817, 975, 1871, 2200
Eam1105I	GACNNNNNGTC	1 cut(s)	2180
EarI	CTCTTC	4 cut(s)	817, 975, 1871, 2200
Eco147I	AGGCCT	1 cut(s)	1486
Eco24I	GRGCYC	1 cut(s)	1279
Eco47I	GGWCC	1 cut(s)	142
Eco57I	CTGAAG	1 cut(s)	773
EcoRI	GAATTC	3 cut(s)	35, 196, 1696
EcoRII	CCWGG	3 cut(s)	1486, 1534, 2073
EcoT38I	GRGCYC	1 cut(s)	1279
Esp3I	CGTCTC	1 cut(s)	1478
FalI	AAGNNNNNCTT	4 cut(s)	415, 447, 1198, 1230
FaqI	GGGAC	1 cut(s)	1655
FbaI	TGATCA	1 cut(s)	397
FblI	GTMKAC	3 cut(s)	533, 786, 1797
Fnu4HI	GCNGC	9 cut(s)	182, 315, 327, 374, 393, 1128, 1302, 1338, 2208
FokI	GGATG	5 cut(s)	351, 532, 1213, 1942, 2178
FriOI	GRGCYC	1 cut(s)	1279
Fsp4HI	GCNGC	9 cut(s)	182, 315, 327, 374, 393, 1128, 1302, 1338, 2208
FspBI	CTAG	5 cut(s)	77, 168, 471, 776, 1482
GlaI	GCGC	1 cut(s)	180
GluI	GCNGC	9 cut(s)	182, 315, 327, 374, 393, 1128, 1302, 1338, 2208
GsaI	CCCAGC	1 cut(s)	822
HaeII	RGCGCY	1 cut(s)	182
HaeIII	GGCC	6 cut(s)	1033, 1456, 1486, 1494, 1956, 2148
HapII	CCGG	4 cut(s)	920, 1187, 1957, 2149
HgaI	GACGC	3 cut(s)	770, 1584, 2184
HhaI	GCGC	1 cut(s)	181
Hin6I	GCGC	1 cut(s)	179
HinP1I	GCGC	1 cut(s)	179
HincII	GTYRAC	1 cut(s)	534
HindII	GTYRAC	1 cut(s)	534
HindIII	AAGCTT	1 cut(s)	978
HpaII	CCGG	4 cut(s)	920, 1187, 1957, 2149
HphI	GGTGA	3 cut(s)	971, 1145, 2044
Hpy166II	GTNNAC	5 cut(s)	534, 787, 953, 1115, 1798
Hpy8I	GTNNAC	5 cut(s)	534, 787, 953, 1115, 1798
Hpy99I	CGWCG	1 cut(s)	1578
HpyAV	CCTTC	5 cut(s)	748, 775, 860, 1309, 1846
HpyCH4III	ACNGT	8 cut(s)	98, 142, 738, 803, 950, 1108, 1735, 1829
HpyCH4IV	ACGT	2 cut(s)	1080, 1471
HpyF10VI	GCNNNNNNNGC	8 cut(s)	323, 370, 450, 748, 1127, 1247, 1589, 1829
HpyF3I	CTNAG	7 cut(s)	528, 540, 614, 1263, 1579, 1712, 2211
HpySE526I	ACGT	2 cut(s)	1080, 1471
HspAI	GCGC	1 cut(s)	179
Kpn2I	TCCGGA	1 cut(s)	919
Ksp22I	TGATCA	1 cut(s)	397
LguI	GCTCTTC	1 cut(s)	975
LmnI	GCTCC	3 cut(s)	1419, 1509, 1820
Lsp1109I	GCAGC	6 cut(s)	313, 326, 379, 1139, 1288, 2194
LweI	GCATC	3 cut(s)	252, 373, 1191
MaeI	CTAG	5 cut(s)	77, 168, 471, 776, 1482
MaeII	ACGT	2 cut(s)	1080, 1471
MaeIII	GTNAC	2 cut(s)	572, 878
MbiI	CCGCTC	1 cut(s)	1927
MflI	RGATCY	3 cut(s)	402, 1253, 1660
MhlI	GDGCHC	5 cut(s)	611, 1117, 1279, 1834, 1911
MlyI	GAGTC	5 cut(s)	53, 317, 379, 925, 1756
MmeI	TCCRAC	2 cut(s)	12, 1567
MroI	TCCGGA	1 cut(s)	919
MroXI	GAANNNNTTC	1 cut(s)	668
MseI	TTAA	6 cut(s)	507, 660, 744, 1161, 1602, 1665
MslI	CAYNNNNRTG	4 cut(s)	129, 852, 1636, 1904
MspA1I	CMGCKG	5 cut(s)	444, 911, 1130, 1301, 1550
MspCI	CTTAAG	1 cut(s)	1160
MspI	CCGG	4 cut(s)	920, 1187, 1957, 2149
MspR9I	CCNGG	4 cut(s)	1488, 1536, 1958, 2075
Mva1269I	GAATGC	1 cut(s)	838
MvaI	CCWGG	3 cut(s)	1488, 1536, 2075
MvnI	CGCG	1 cut(s)	975
MwoI	GCNNNNNNNGC	8 cut(s)	323, 370, 450, 748, 1127, 1247, 1589, 1829
NciI	CCSGG	1 cut(s)	1958
NlaIV	GGNNCC	5 cut(s)	568, 621, 1032, 1415, 1822
NmeAIII	GCCGAG	1 cut(s)	1059
NruI	TCGCGA	1 cut(s)	975
NspI	RCATGY	5 cut(s)	301, 1181, 1894, 1903, 2111
OliI	CACNNNNGTG	1 cut(s)	1636
PaeI	GCATGC	2 cut(s)	1181, 2111
PagI	TCATGA	2 cut(s)	847, 2082
PaqCI	CACCTGC	1 cut(s)	2020
PceI	AGGCCT	1 cut(s)	1486
PciI	ACATGT	1 cut(s)	1899
PciSI	GCTCTTC	1 cut(s)	975
PctI	GAATGC	1 cut(s)	838
PdmI	GAANNNNTTC	1 cut(s)	668
PfeI	GAWTC	8 cut(s)	87, 209, 596, 644, 905, 962, 1786, 2038
PflMI	CCANNNNNTGG	1 cut(s)	1016
PkrI	GCNGC	9 cut(s)	183, 316, 328, 375, 394, 1129, 1303, 1339, 2209
Ple19I	CGATCG	1 cut(s)	1675
PleI	GAGTC	5 cut(s)	53, 316, 379, 924, 1755
PpsI	GAGTC	5 cut(s)	53, 316, 379, 924, 1755
PscI	ACATGT	1 cut(s)	1899
PsiI	TTATAA	1 cut(s)	1283
Psp6I	CCWGG	3 cut(s)	1486, 1534, 2073
PspFI	CCCAGC	1 cut(s)	818
PspGI	CCWGG	3 cut(s)	1486, 1534, 2073
PspN4I	GGNNCC	5 cut(s)	568, 621, 1032, 1415, 1822
PspPI	GGNCC	3 cut(s)	142, 1031, 1493
PstI	CTGCAG	3 cut(s)	316, 331, 1306
PsuI	RGATCY	3 cut(s)	402, 1253, 1660
PvuI	CGATCG	1 cut(s)	1675
PvuII	CAGCTG	4 cut(s)	444, 911, 1130, 1301
RruI	TCGCGA	1 cut(s)	975
RsaI	GTAC	5 cut(s)	117, 251, 469, 809, 1261
RsaNI	GTAC	5 cut(s)	116, 250, 468, 808, 1260
RseI	CAYNNNNRTG	4 cut(s)	129, 852, 1636, 1904
Rsr2I	CGGWCCG	1 cut(s)	142
RsrII	CGGWCCG	1 cut(s)	142
SalI	GTCGAC	1 cut(s)	532
SapI	GCTCTTC	1 cut(s)	975
SaqAI	TTAA	6 cut(s)	507, 660, 744, 1161, 1602, 1665
SatI	GCNGC	9 cut(s)	182, 315, 327, 374, 393, 1128, 1302, 1338, 2208
Sau96I	GGNCC	3 cut(s)	142, 1031, 1493
ScaI	AGTACT	2 cut(s)	469, 809
SchI	GAGTC	5 cut(s)	53, 317, 379, 925, 1756
ScrFI	CCNGG	4 cut(s)	1488, 1536, 1958, 2075
SduI	GDGCHC	5 cut(s)	611, 1117, 1279, 1834, 1911
SfaNI	GCATC	3 cut(s)	252, 373, 1191
SfcI	CTRYAG	4 cut(s)	312, 327, 1302, 1825
SinI	GGWCC	1 cut(s)	142
SmiMI	CAYNNNNRTG	4 cut(s)	129, 852, 1636, 1904
SmlI	CTYRAG	4 cut(s)	19, 245, 1160, 1235
SmoI	CTYRAG	4 cut(s)	19, 245, 1160, 1235
SpeI	ACTAGT	1 cut(s)	470
SphI	GCATGC	2 cut(s)	1181, 2111
SseBI	AGGCCT	1 cut(s)	1486
SsiI	CCGC	6 cut(s)	182, 374, 1165, 1338, 1550, 1927
SspMI	CTAG	5 cut(s)	77, 168, 471, 776, 1482
StuI	AGGCCT	1 cut(s)	1486
StyD4I	CCNGG	4 cut(s)	1486, 1534, 1956, 2073
TaaI	ACNGT	8 cut(s)	98, 142, 738, 803, 950, 1108, 1735, 1829
TaiI	ACGT	2 cut(s)	1083, 1474
TaqI	TCGA	5 cut(s)	62, 533, 672, 1521, 1671
TatI	WGTACW	3 cut(s)	249, 467, 807
TauI	GCSGC	3 cut(s)	184, 376, 1340
TfiI	GAWTC	8 cut(s)	87, 209, 596, 644, 905, 962, 1786, 2038
Tru1I	TTAA	6 cut(s)	507, 660, 744, 1161, 1602, 1665
Tru9I	TTAA	6 cut(s)	507, 660, 744, 1161, 1602, 1665
TscAI	CASTG	4 cut(s)	741, 808, 1834, 2030
TseI	GCWGC	6 cut(s)	314, 326, 392, 1127, 1301, 2207
TspDTI	ATGAA	9 cut(s)	209, 311, 423, 435, 546, 1403, 1799, 1982, 2154
TspRI	CASTG	4 cut(s)	741, 808, 1834, 2030
Van91I	CCANNNNNTGG	1 cut(s)	1016
Vha464I	CTTAAG	1 cut(s)	1160
VneI	GTGCAC	1 cut(s)	1113
VpaK11BI	GGWCC	1 cut(s)	142
XapI	RAATTY	5 cut(s)	35, 162, 196, 1363, 1696
XceI	RCATGY	5 cut(s)	301, 1181, 1894, 1903, 2111
XmiI	GTMKAC	3 cut(s)	533, 786, 1797
XmnI	GAANNNNTTC	1 cut(s)	668
XspI	CTAG	5 cut(s)	77, 168, 471, 776, 1482
ZrmI	AGTACT	2 cut(s)	469, 809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.