Rh1BG344900

aarF domain-containing protein kinase At5g05200

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0006647
Physical Location & Seq
Forward (+)
47792588 .. 47799018
6431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG344900.1

Sequence Viewer

Length: 1650 bp
ATGGCCTTGGTCTCGGCTGTGAGAGGCGGCCGGCTCCCGTCATCATTACATCATCATCATCATCATCATCTGGGTTCGTCTTCGTCTTCATCACTAGGTAGTTGGCGTTCGTTAAGACCGTGGAAGCAGATGAATTCTAGCTCAAAGGGCTTCACTCTCTTGGCTCGTTACTCACAAACACAGGACCTTTTCTCCTCTCGCCTTCAAGATAGTATGGAAAACTTGCCTAAACTGGTGGAGGATATTGTCCGGACATCATTAAGTACAGGCCCACGTGGCGCCCTAAGGATGGCTCAAGGTATTCAAGCATTTATTGGTGTTGGTGGGGAGTGGCTTACTGAGGCATCAAAGTCAGCAAATTCAGCTACTGGCTTACCAACCCAATTGCAGCTTGGAGTGCTCTCCCCCCTTTACTTGAGGAGATTGTTTGAGCGCATGGGAGCAACTTATATTAAATTGGGCCAGTTCATTGCATCCGCACCAACATTGTTCCCAGCAGACTATGTCGAGGAATTTCAGAACTGCTTTGACAGAGCTCCCGCAATACCTTTTGTGGAGATTCAACAAATATTGCGCCAGGAATTGGGGAGACCAATTGAAAGTGTATTTGAGTATGTTGACCCAACTCCAATTGCTTCGGCCTCAATAGCACAAGTTCATGGTGCAAGGCTAAGAGGGTCCCAAGAAGATGTGGTTATAAAGGTCTTGAAACCCGGAATAGAAGATATGTTGGTTGCAGATCTGAATTTTATTTACATAGTTGCTCGCATTTTGGAGTTCTTGAGTCCTGACATAAGCCGTGCTTCACTGGTTGGTATCGTGAAGGACATACGGGAATCTATGCTTGAAGAGGTTGATTTCTACAAGGAGGCTGCAAATGTTGAGTCCTTCAGGAGATATTTAGAAGCCATGGGACTCACAAGGCAGGCTACAGCTCCAAGAGTGTATCACCAATGCAGCACAAAACGAATTTTAACAATGGAGAGGCTATATGGGGTTCCTCTTACTGACTTAGACTCTATAAGTTCACTTGTTTCTAGTCCGGAGGCCAGTCTCATAACTGCCCTTAATGTGTGGTTTGGCAGTTTACTTGCCTGTGAAAGCTTCCATGCAGATGTGCACGCTGGAAATCTGTGGTTGTTGCGTGATGGCCGTATTGGGTTTCTTGACTTTGGAATCGTAGGTCGTATAGACCCACAAACATGGGCTGCCATGGAAATCTTTTTGGCATCAATTGCAACGGAAGAATATGAATCAATGGCATCTGCGTTGATTCAAATGGGTGCTACAGACACAAATGTTGATGCTAAGGCTTTTGCAAGTGACTTGGAAAAAATGTTCTCATCAATAAAGGAGTTGGATACGGAAATAGTCATAGCAACAGCAAGGGAGCCGGCTACAAATGCAACTGCTGTTTCTGCTAATGTAGTCGTTGATGAGAGACAAATGAATGCACTTTTTCTTGATGTGGTTCGGGTTAGTGAATCATATGGATTGAAGTTTCCCCGAGAGTTTGCACTTCTCTTGAAGCAGCTCTTGTATTTTGATCGGTACACCCGTTTGTTGGCCCCAAACTTGAATATGCTCCAGGACCAAAGGATTTCAATTGCTTCAAATCGAAGAAGCAACTACAGGGACAATTTCAGCTGA

Protein Analysis

549

Amino Acids

61.1

Weight (kDa)

5.95

Isoelectric Point (pI)

40.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 176 - 422 2.3e-59 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 698
AccB1I GGYRCC 1 cut(s) 278
AccB7I CCANNNNNTGG 1 cut(s) 583
AccIII TCCGGA 2 cut(s) 249, 1042
AciI CCGC 3 cut(s) 27, 477, 540
AcoI YGGCCR 2 cut(s) 28, 1150
AcsI RAATTY 5 cut(s) 133, 358, 512, 745, 969
AcuI CTGAAG 1 cut(s) 874
AcvI CACGTG 1 cut(s) 275
AcyI GRCGYC 1 cut(s) 279
AfaI GTAC 2 cut(s) 265, 1553
AfiI CCNNNNNNNGG 3 cut(s) 289, 583, 1564
AjnI CCWGG 2 cut(s) 576, 1587
AloI GAACNNNNNNTCC 2 cut(s) 1322, 1354
AluBI AGCT 8 cut(s) 141, 365, 391, 536, 935, 1104, 1534, 1647
AluI AGCT 8 cut(s) 141, 365, 391, 536, 935, 1104, 1534, 1647
Alw21I GWGCWC 3 cut(s) 402, 538, 1122
Alw26I GTCTC 4 cut(s) 16, 583, 1058, 1435
Alw44I GTGCAC 1 cut(s) 1118
AlwNI CAGNNNCTG 1 cut(s) 368
Ama87I CYCGRG 1 cut(s) 1506
Aor13HI TCCGGA 2 cut(s) 249, 1042
AoxI GGCC 8 cut(s) 3, 28, 268, 460, 639, 1047, 1150, 1566
ApaLI GTGCAC 1 cut(s) 1118
ApeKI GCWGC 5 cut(s) 388, 872, 957, 1208, 1531
ApoI RAATTY 5 cut(s) 133, 358, 512, 745, 969
ArsI GACNNNNNNTTYG 2 cut(s) 869, 901
AspLEI GCGC 3 cut(s) 281, 435, 576
AspS9I GGNCC 6 cut(s) 184, 269, 460, 678, 1567, 1591
AsuC2I CCSGG 1 cut(s) 714
AsuHPI GGTGA 1 cut(s) 941
AvaI CYCGRG 1 cut(s) 1506
AvaII GGWCC 3 cut(s) 184, 678, 1591
AxyI CCTNAGG 1 cut(s) 284
BaeGI GKGCMC 1 cut(s) 1122
BaeI ACNNNNGTAYC 2 cut(s) 1543, 1576
BanI GGYRCC 1 cut(s) 278
BanII GRGCYC 1 cut(s) 538
BbrPI CACGTG 1 cut(s) 275
BbsI GAAGAC 2 cut(s) 72, 78
Bbv12I GWGCWC 3 cut(s) 402, 538, 1122
BbvI GCAGC 5 cut(s) 400, 859, 969, 1195, 1543
BccI CCATC 2 cut(s) 283, 1142
BceAI ACGGC 2 cut(s) 783, 1137
BciT130I CCWGG 2 cut(s) 578, 1589
BciVI GTATCC 1 cut(s) 1354
BcnI CCSGG 1 cut(s) 714
BcoDI GTCTC 4 cut(s) 16, 583, 1058, 1435
BfaI CTAG 3 cut(s) 95, 138, 1038
BfmI CTRYAG 3 cut(s) 930, 1287, 1630
BfoI RGCGCY 1 cut(s) 282
BfuI GTATCC 1 cut(s) 1354
BglI GCCNNNNNGGC 1 cut(s) 276
BglII AGATCT 1 cut(s) 739
BisI GCNGC 6 cut(s) 28, 389, 873, 958, 1209, 1532
BlsI GCNGC 6 cut(s) 29, 390, 874, 959, 1210, 1533
Bme1390I CCNGG 3 cut(s) 578, 714, 1589
Bme18I GGWCC 3 cut(s) 184, 678, 1591
BmeT110I CYCGRG 1 cut(s) 1506
BmgT120I GGNCC 6 cut(s) 184, 269, 460, 678, 1567, 1591
BmiI GGNNCC 7 cut(s) 35, 280, 679, 680, 999, 1392, 1569
BmrFI CCNGG 3 cut(s) 578, 714, 1589
BmsI GCATC 5 cut(s) 353, 482, 1238, 1271, 1294
BpiI GAAGAC 2 cut(s) 72, 78
BpmI CTGGAG 1 cut(s) 1571
Bpu10I CCTNAGC 1 cut(s) 1308
BpuEI CTTGAG 3 cut(s) 279, 436, 802
BpuMI CCSGG 1 cut(s) 714
BsaAI YACGTR 1 cut(s) 275
BsaHI GRCGYC 1 cut(s) 279
BsaI GGTCTC 2 cut(s) 16, 583
BsaJI CCNNGG 4 cut(s) 6, 119, 909, 1212
BsaWI WCCGGW 2 cut(s) 249, 1042
BsaXI ACNNNNNCTCC 2 cut(s) 176, 206
Bsc4I CCNNNNNNNGG 3 cut(s) 289, 583, 1564
Bse118I RCCGGY 2 cut(s) 30, 1393
Bse1I ACTGG 5 cut(s) 237, 373, 463, 813, 1050
Bse21I CCTNAGG 1 cut(s) 284
Bse3DI GCAATG 1 cut(s) 468
BseAI TCCGGA 2 cut(s) 249, 1042
BseBI CCWGG 2 cut(s) 578, 1589
BseDI CCNNGG 4 cut(s) 6, 119, 909, 1212
BseGI GGATG 2 cut(s) 294, 473
BseLI CCNNNNNNNGG 3 cut(s) 289, 583, 1564
BseMI GCAATG 1 cut(s) 468
BseMII CTCAG 1 cut(s) 330
BseNI ACTGG 5 cut(s) 237, 373, 463, 813, 1050
BseRI GAGGAG 2 cut(s) 184, 433
BseSI GKGCMC 1 cut(s) 1122
BseX3I CGGCCG 1 cut(s) 28
BseXI GCAGC 5 cut(s) 400, 859, 969, 1195, 1543
BseYI CCCAGC 1 cut(s) 493
Bsh1285I CGRYCG 1 cut(s) 31
BshFI GGCC 8 cut(s) 5, 30, 270, 462, 641, 1049, 1152, 1568
BshNI GGYRCC 1 cut(s) 278
BsiEI CGRYCG 1 cut(s) 31
BsiHKAI GWGCWC 3 cut(s) 402, 538, 1122
BsiHKCI CYCGRG 1 cut(s) 1506
BsiSI CCGG 5 cut(s) 31, 250, 714, 1043, 1394
BslFI GGGAC 2 cut(s) 664, 927
BslI CCNNNNNNNGG 3 cut(s) 289, 583, 1564
BsmAI GTCTC 4 cut(s) 16, 583, 1058, 1435
BsmFI GGGAC 2 cut(s) 664, 927
BsmI GAATGC 1 cut(s) 1456
BsnI GGCC 8 cut(s) 5, 30, 270, 462, 641, 1049, 1152, 1568
Bso31I GGTCTC 2 cut(s) 16, 583
BsoBI CYCGRG 1 cut(s) 1506
Bsp1286I GDGCHC 3 cut(s) 402, 538, 1122
Bsp13I TCCGGA 2 cut(s) 249, 1042
Bsp143I GATC 2 cut(s) 739, 1546
Bsp19I CCATGG 2 cut(s) 909, 1212
BspACI CCGC 3 cut(s) 27, 477, 540
BspANI GGCC 8 cut(s) 5, 30, 270, 462, 641, 1049, 1152, 1568
BspCNI CTCAG 1 cut(s) 331
BspEI TCCGGA 2 cut(s) 249, 1042
BspLI GGNNCC 7 cut(s) 35, 280, 679, 680, 999, 1392, 1569
BspT107I GGYRCC 1 cut(s) 278
BspTNI GGTCTC 2 cut(s) 16, 583
BsrDI GCAATG 1 cut(s) 468
BsrFI RCCGGY 2 cut(s) 30, 1393
BsrI ACTGG 5 cut(s) 237, 373, 463, 813, 1050
BssAI RCCGGY 2 cut(s) 30, 1393
BssECI CCNNGG 4 cut(s) 6, 119, 909, 1212
BssMI GATC 2 cut(s) 739, 1546
BssNI GRCGYC 1 cut(s) 279
BssT1I CCWWGG 3 cut(s) 6, 909, 1212
Bst2UI CCWGG 2 cut(s) 578, 1589
Bst4CI ACNGT 1 cut(s) 120
Bst6I CTCTTC 1 cut(s) 843
BstACI GRCGYC 1 cut(s) 279
BstAPI GCANNNNNTGC 1 cut(s) 1235
BstBAI YACGTR 1 cut(s) 275
BstC8I GCNNGC 5 cut(s) 32, 766, 927, 1122, 1395
BstDEI CTNAG 5 cut(s) 284, 339, 671, 1012, 1308
BstDSI CCRYGG 3 cut(s) 119, 909, 1212
BstF5I GGATG 2 cut(s) 294, 473
BstH2I RGCGCY 1 cut(s) 282
BstHHI GCGC 3 cut(s) 281, 435, 576
BstKTI GATC 2 cut(s) 742, 1549
BstMAI GTCTC 4 cut(s) 16, 583, 1058, 1435
BstMBI GATC 2 cut(s) 739, 1546
BstMCI CGRYCG 1 cut(s) 31
BstMWI GCNNNNNNNGC 8 cut(s) 147, 276, 362, 397, 647, 1235, 1403, 1418
BstNI CCWGG 2 cut(s) 578, 1589
BstSCI CCNGG 3 cut(s) 576, 712, 1587
BstSFI CTRYAG 3 cut(s) 930, 1287, 1630
BstSLI GKGCMC 1 cut(s) 1122
BstV1I GCAGC 5 cut(s) 400, 859, 969, 1195, 1543
BstV2I GAAGAC 2 cut(s) 72, 78
BstX2I RGATCY 1 cut(s) 739
BstXI CCANNNNNNTGG 1 cut(s) 1203
BstYI RGATCY 1 cut(s) 739
BstZI CGGCCG 1 cut(s) 28
Bsu36I CCTNAGG 1 cut(s) 284
BsuI GTATCC 1 cut(s) 1354
BsuRI GGCC 8 cut(s) 5, 30, 270, 462, 641, 1049, 1152, 1568
BtgI CCRYGG 3 cut(s) 119, 909, 1212
BtsCI GGATG 2 cut(s) 294, 473
BtsIMutI CAGTG 1 cut(s) 806
Cac8I GCNNGC 5 cut(s) 32, 766, 927, 1122, 1395
CaiI CAGNNNCTG 1 cut(s) 368
CfoI GCGC 3 cut(s) 281, 435, 576
Cfr10I RCCGGY 2 cut(s) 30, 1393
Cfr13I GGNCC 6 cut(s) 184, 269, 460, 678, 1567, 1591
Csp6I GTAC 2 cut(s) 264, 1552
CviAII CATG 6 cut(s) 436, 659, 910, 1109, 1203, 1213
CviQI GTAC 2 cut(s) 264, 1552
DdeI CTNAG 5 cut(s) 284, 339, 671, 1012, 1308
DinI GGCGCC 1 cut(s) 280
DpnI GATC 2 cut(s) 741, 1548
DpnII GATC 2 cut(s) 739, 1546
EaeI YGGCCR 2 cut(s) 28, 1150
EagI CGGCCG 1 cut(s) 28
Eam1104I CTCTTC 1 cut(s) 843
EarI CTCTTC 1 cut(s) 843
Ecl136II GAGCTC 1 cut(s) 536
EclXI CGGCCG 1 cut(s) 28
Eco130I CCWWGG 3 cut(s) 6, 909, 1212
Eco24I GRGCYC 1 cut(s) 538
Eco31I GGTCTC 2 cut(s) 16, 583
Eco47I GGWCC 3 cut(s) 184, 678, 1591
Eco52I CGGCCG 1 cut(s) 28
Eco53kI GAGCTC 1 cut(s) 536
Eco57I CTGAAG 1 cut(s) 874
Eco72I CACGTG 1 cut(s) 275
Eco81I CCTNAGG 1 cut(s) 284
Eco88I CYCGRG 1 cut(s) 1506
EcoICRI GAGCTC 1 cut(s) 536
EcoO109I RGGNCCY 2 cut(s) 184, 678
EcoRI GAATTC 1 cut(s) 133
EcoRII CCWGG 2 cut(s) 576, 1587
EcoT14I CCWWGG 3 cut(s) 6, 909, 1212
EcoT38I GRGCYC 1 cut(s) 538
EgeI GGCGCC 1 cut(s) 280
EheI GGCGCC 1 cut(s) 280
ErhI CCWWGG 3 cut(s) 6, 909, 1212
FaeI CATG 6 cut(s) 439, 662, 913, 1112, 1206, 1216
FalI AAGNNNNNCTT 4 cut(s) 787, 819, 1520, 1552
FaqI GGGAC 2 cut(s) 664, 927
FatI CATG 6 cut(s) 435, 658, 909, 1108, 1202, 1212
FauI CCCGC 1 cut(s) 547
FauNDI CATATG 1 cut(s) 1489
Fnu4HI GCNGC 6 cut(s) 28, 389, 873, 958, 1209, 1532
FokI GGATG 2 cut(s) 301, 460
FriOI GRGCYC 1 cut(s) 538
Fsp4HI GCNGC 6 cut(s) 28, 389, 873, 958, 1209, 1532
FspBI CTAG 3 cut(s) 95, 138, 1038
GlaI GCGC 3 cut(s) 280, 434, 575
GluI GCNGC 6 cut(s) 28, 389, 873, 958, 1209, 1532
GsaI CCCAGC 1 cut(s) 497
GsuI CTGGAG 1 cut(s) 1571
HaeII RGCGCY 1 cut(s) 282
HaeIII GGCC 8 cut(s) 5, 30, 270, 462, 641, 1049, 1152, 1568
HapII CCGG 5 cut(s) 31, 250, 714, 1043, 1394
HhaI GCGC 3 cut(s) 281, 435, 576
Hin1I GRCGYC 1 cut(s) 279
Hin1II CATG 6 cut(s) 439, 662, 913, 1112, 1206, 1216
Hin6I GCGC 3 cut(s) 279, 433, 574
HinP1I GCGC 3 cut(s) 279, 433, 574
HincII GTYRAC 1 cut(s) 619
HindII GTYRAC 1 cut(s) 619
HindIII AAGCTT 1 cut(s) 1102
HpaII CCGG 5 cut(s) 31, 250, 714, 1043, 1394
HphI GGTGA 1 cut(s) 941
Hpy166II GTNNAC 5 cut(s) 619, 1028, 1088, 1120, 1554
Hpy188I TCNGA 2 cut(s) 519, 744
Hpy8I GTNNAC 5 cut(s) 619, 1028, 1088, 1120, 1554
HpyAV CCTTC 3 cut(s) 212, 817, 898
HpyCH4III ACNGT 1 cut(s) 120
HpyCH4IV ACGT 1 cut(s) 274
HpyF10VI GCNNNNNNNGC 8 cut(s) 147, 276, 362, 397, 647, 1235, 1403, 1418
HpyF3I CTNAG 5 cut(s) 284, 339, 671, 1012, 1308
HpySE526I ACGT 1 cut(s) 274
Hsp92I GRCGYC 1 cut(s) 279
Hsp92II CATG 6 cut(s) 439, 662, 913, 1112, 1206, 1216
HspAI GCGC 3 cut(s) 279, 433, 574
KasI GGCGCC 1 cut(s) 278
KflI GGGWCCC 1 cut(s) 678
Kpn2I TCCGGA 2 cut(s) 249, 1042
KroI GCCGGC 2 cut(s) 30, 1393
KroNI GCCGGC 2 cut(s) 32, 1395
Kzo9I GATC 2 cut(s) 739, 1546
LmnI GCTCC 6 cut(s) 39, 440, 541, 940, 1390, 1590
Lsp1109I GCAGC 5 cut(s) 400, 859, 969, 1195, 1543
LweI GCATC 5 cut(s) 353, 482, 1238, 1271, 1294
MaeI CTAG 3 cut(s) 95, 138, 1038
MaeII ACGT 1 cut(s) 274
MaeIII GTNAC 2 cut(s) 167, 1322
MalI GATC 2 cut(s) 741, 1548
MboI GATC 2 cut(s) 739, 1546
MboII GAAGA 7 cut(s) 72, 78, 698, 734, 860, 1256, 1632
MfeI CAATTG 5 cut(s) 383, 594, 630, 1233, 1605
MflI RGATCY 1 cut(s) 739
MhlI GDGCHC 3 cut(s) 402, 538, 1122
Mly113I GGCGCC 1 cut(s) 279
MlyI GAGTC 4 cut(s) 793, 893, 909, 1010
MmeI TCCRAC 1 cut(s) 1338
MroI TCCGGA 2 cut(s) 249, 1042
MroNI GCCGGC 2 cut(s) 30, 1393
MseI TTAA 5 cut(s) 113, 260, 453, 974, 1068
MslI CAYNNNNRTG 2 cut(s) 1113, 1201
MspA1I CMGCKG 1 cut(s) 1647
MspI CCGG 5 cut(s) 31, 250, 714, 1043, 1394
MspR9I CCNGG 3 cut(s) 578, 714, 1589
MunI CAATTG 5 cut(s) 383, 594, 630, 1233, 1605
Mva1269I GAATGC 1 cut(s) 1456
MvaI CCWGG 2 cut(s) 578, 1589
MwoI GCNNNNNNNGC 8 cut(s) 147, 276, 362, 397, 647, 1235, 1403, 1418
NaeI GCCGGC 2 cut(s) 32, 1395
NarI GGCGCC 1 cut(s) 279
NciI CCSGG 1 cut(s) 714
NcoI CCATGG 2 cut(s) 909, 1212
NdeI CATATG 1 cut(s) 1489
NdeII GATC 2 cut(s) 739, 1546
NgoMIV GCCGGC 2 cut(s) 30, 1393
NlaIII CATG 6 cut(s) 439, 662, 913, 1112, 1206, 1216
NlaIV GGNNCC 7 cut(s) 35, 280, 679, 680, 999, 1392, 1569
NmuCI GTSAC 1 cut(s) 1322
PcsI WCGNNNNNNNCGW 2 cut(s) 116, 1555
PctI GAATGC 1 cut(s) 1456
PdiI GCCGGC 2 cut(s) 32, 1395
PfeI GAWTC 6 cut(s) 559, 836, 1176, 1253, 1273, 1484
PflFI GACNNNGTC 1 cut(s) 503
PflMI CCANNNNNTGG 1 cut(s) 583
PfoI TCCNGGA 1 cut(s) 1587
PkrI GCNGC 6 cut(s) 29, 390, 874, 959, 1210, 1533
PleI GAGTC 4 cut(s) 792, 892, 909, 1010
PluTI GGCGCC 1 cut(s) 282
PmaCI CACGTG 1 cut(s) 275
PmlI CACGTG 1 cut(s) 275
PpsI GAGTC 4 cut(s) 792, 892, 909, 1010
Ppu21I YACGTR 1 cut(s) 275
PpuMI RGGWCCY 2 cut(s) 184, 678
PsiI TTATAA 1 cut(s) 698
Psp124BI GAGCTC 1 cut(s) 538
Psp5II RGGWCCY 2 cut(s) 184, 678
Psp6I CCWGG 2 cut(s) 576, 1587
PspCI CACGTG 1 cut(s) 275
PspFI CCCAGC 1 cut(s) 493
PspGI CCWGG 2 cut(s) 576, 1587
PspN4I GGNNCC 7 cut(s) 35, 280, 679, 680, 999, 1392, 1569
PspPI GGNCC 6 cut(s) 184, 269, 460, 678, 1567, 1591
PspPPI RGGWCCY 2 cut(s) 184, 678
PsrI GAACNNNNNNTAC 2 cut(s) 91, 123
PstNI CAGNNNCTG 1 cut(s) 368
PsuI RGATCY 1 cut(s) 739
PsyI GACNNNGTC 1 cut(s) 503
PvuII CAGCTG 1 cut(s) 1647
RsaI GTAC 2 cut(s) 265, 1553
RsaNI GTAC 2 cut(s) 264, 1552
RseI CAYNNNNRTG 2 cut(s) 1113, 1201
SacI GAGCTC 1 cut(s) 538
SaqAI TTAA 5 cut(s) 113, 260, 453, 974, 1068
SatI GCNGC 6 cut(s) 28, 389, 873, 958, 1209, 1532
Sau3AI GATC 2 cut(s) 739, 1546
Sau96I GGNCC 6 cut(s) 184, 269, 460, 678, 1567, 1591
SchI GAGTC 4 cut(s) 793, 893, 909, 1010
ScrFI CCNGG 3 cut(s) 578, 714, 1589
SduI GDGCHC 3 cut(s) 402, 538, 1122
SfaNI GCATC 5 cut(s) 353, 482, 1238, 1271, 1294
SfcI CTRYAG 3 cut(s) 930, 1287, 1630
SfoI GGCGCC 1 cut(s) 280
SinI GGWCC 3 cut(s) 184, 678, 1591
SmiMI CAYNNNNRTG 2 cut(s) 1113, 1201
SmlI CTYRAG 3 cut(s) 294, 415, 781
SmoI CTYRAG 3 cut(s) 294, 415, 781
SsiI CCGC 3 cut(s) 27, 477, 540
SspDI GGCGCC 1 cut(s) 278
SspI AATATT 1 cut(s) 570
SspMI CTAG 3 cut(s) 95, 138, 1038
SstI GAGCTC 1 cut(s) 538
StyD4I CCNGG 3 cut(s) 576, 712, 1587
StyI CCWWGG 3 cut(s) 6, 909, 1212
TaaI ACNGT 1 cut(s) 120
TaiI ACGT 1 cut(s) 277
TaqI TCGA 2 cut(s) 507, 1618
TatI WGTACW 1 cut(s) 263
TauI GCSGC 1 cut(s) 30
TfiI GAWTC 6 cut(s) 559, 836, 1176, 1253, 1273, 1484
Tru1I TTAA 5 cut(s) 113, 260, 453, 974, 1068
Tru9I TTAA 5 cut(s) 113, 260, 453, 974, 1068
TscAI CASTG 1 cut(s) 813
TseFI GTSAC 1 cut(s) 1322
TseI GCWGC 5 cut(s) 388, 872, 957, 1208, 1531
Tsp45I GTSAC 1 cut(s) 1322
TspDTI ATGAA 6 cut(s) 78, 146, 457, 647, 1266, 1463
TspGWI ACGGA 2 cut(s) 1256, 1379
TspRI CASTG 1 cut(s) 813
Tth111I GACNNNGTC 1 cut(s) 503
Van91I CCANNNNNTGG 1 cut(s) 583
VneI GTGCAC 1 cut(s) 1118
VpaK11BI GGWCC 3 cut(s) 184, 678, 1591
XapI RAATTY 5 cut(s) 133, 358, 512, 745, 969
XcmI CCANNNNNNNNNTGG 1 cut(s) 389
XspI CTAG 3 cut(s) 95, 138, 1038
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.