Prolyl 4-hydroxylase alpha subunit homologues.
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51880 |
| fragaria_vesca | FvH4_7g28750 FvH4_7g28750 |
| malus_domestica | MD01G1193900.v1.1 |
| prunus_persica | Prupe.2G287700_v2.0.a1 |
| pyrus_communis | pycom01g20420 |
| rosa_chinensis | RchiOBHm_Chr1g0376301 |
| rosa_laevigata | RLG00000026613 |
| rosa_multiflora | Rmu_ssc0000116.1_g000061 |
| rosa_roxburghii | Rroxscaffold_4G00282220 |
| rosa_rugosa | Rorug01G0395100 Rorug01G0395200 Rorug01G0395300 Rorug01G0395300 Rorug01G0395400 |
| rosa_samantha | Rh1AG406500 Rh1BG370500 Rh1CG383300 Rh1DG400300 |
| rosa_wichuraiana | Rw1G036080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 174 |
| AjnI | CCWGG | 1 cut(s) | 177 |
| AoxI | GGCC | 1 cut(s) | 180 |
| BciT130I | CCWGG | 1 cut(s) | 179 |
| BfaI | CTAG | 1 cut(s) | 107 |
| Bme1390I | CCNGG | 1 cut(s) | 179 |
| BmiI | GGNNCC | 1 cut(s) | 92 |
| BmrFI | CCNGG | 1 cut(s) | 179 |
| BmrI | ACTGGG | 1 cut(s) | 160 |
| BmsI | GCATC | 2 cut(s) | 3, 145 |
| BmuI | ACTGGG | 1 cut(s) | 160 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 64, 96 |
| BpuEI | CTTGAG | 1 cut(s) | 128 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 104, 134 |
| Bse1I | ACTGG | 1 cut(s) | 155 |
| BseBI | CCWGG | 1 cut(s) | 179 |
| BseGI | GGATG | 2 cut(s) | 160, 198 |
| BseNI | ACTGG | 1 cut(s) | 155 |
| BseRI | GAGGAG | 3 cut(s) | 109, 112, 115 |
| BshFI | GGCC | 1 cut(s) | 182 |
| BsiSI | CCGG | 1 cut(s) | 129 |
| BsnI | GGCC | 1 cut(s) | 182 |
| Bsp143I | GATC | 1 cut(s) | 193 |
| BspANI | GGCC | 1 cut(s) | 182 |
| BspLI | GGNNCC | 1 cut(s) | 92 |
| BsrI | ACTGG | 1 cut(s) | 155 |
| BssMI | GATC | 1 cut(s) | 193 |
| Bst2UI | CCWGG | 1 cut(s) | 179 |
| Bst6I | CTCTTC | 1 cut(s) | 108 |
| BstF5I | GGATG | 2 cut(s) | 160, 198 |
| BstKTI | GATC | 1 cut(s) | 196 |
| BstMBI | GATC | 1 cut(s) | 193 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 81 |
| BstNI | CCWGG | 1 cut(s) | 179 |
| BstSCI | CCNGG | 1 cut(s) | 177 |
| BsuRI | GGCC | 1 cut(s) | 182 |
| BtsCI | GGATG | 2 cut(s) | 160, 198 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 172, 207 |
| CviJI | RGCY | 1 cut(s) | 182 |
| CviKI_1 | RGCY | 1 cut(s) | 182 |
| DpnI | GATC | 1 cut(s) | 195 |
| DpnII | GATC | 1 cut(s) | 193 |
| Eam1104I | CTCTTC | 1 cut(s) | 108 |
| EarI | CTCTTC | 1 cut(s) | 108 |
| EcoRII | CCWGG | 1 cut(s) | 177 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 68, 100 |
| FblI | GTMKAC | 1 cut(s) | 174 |
| FokI | GGATG | 2 cut(s) | 167, 185 |
| FspBI | CTAG | 1 cut(s) | 107 |
| HaeIII | GGCC | 1 cut(s) | 182 |
| HapII | CCGG | 1 cut(s) | 129 |
| HincII | GTYRAC | 2 cut(s) | 112, 175 |
| HindII | GTYRAC | 2 cut(s) | 112, 175 |
| HinfI | GANTC | 1 cut(s) | 79 |
| HpaII | CCGG | 1 cut(s) | 129 |
| Hpy166II | GTNNAC | 2 cut(s) | 112, 175 |
| Hpy188III | TCNNGA | 1 cut(s) | 145 |
| Hpy8I | GTNNAC | 2 cut(s) | 112, 175 |
| HpyCH4V | TGCA | 1 cut(s) | 16 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 81 |
| Kzo9I | GATC | 1 cut(s) | 193 |
| LpnPI | CCDG | 5 cut(s) | 73, 136, 142, 164, 191 |
| LweI | GCATC | 2 cut(s) | 3, 145 |
| MaeI | CTAG | 1 cut(s) | 107 |
| MalI | GATC | 1 cut(s) | 195 |
| MboI | GATC | 1 cut(s) | 193 |
| MboII | GAAGA | 1 cut(s) | 95 |
| MluCI | AATT | 1 cut(s) | 65 |
| MlyI | GAGTC | 1 cut(s) | 73 |
| MnlI | CCTC | 7 cut(s) | 51, 111, 125, 130, 133, 136, 152 |
| MseI | TTAA | 2 cut(s) | 53, 207 |
| MspI | CCGG | 1 cut(s) | 129 |
| MspR9I | CCNGG | 1 cut(s) | 179 |
| MvaI | CCWGG | 1 cut(s) | 179 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 81 |
| NdeII | GATC | 1 cut(s) | 193 |
| NlaIV | GGNNCC | 1 cut(s) | 92 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 171 |
| PflFI | GACNNNGTC | 1 cut(s) | 164 |
| PleI | GAGTC | 1 cut(s) | 73 |
| PpsI | GAGTC | 1 cut(s) | 73 |
| Psp6I | CCWGG | 1 cut(s) | 177 |
| PspGI | CCWGG | 1 cut(s) | 177 |
| PspN4I | GGNNCC | 1 cut(s) | 92 |
| PsyI | GACNNNGTC | 1 cut(s) | 164 |
| SalI | GTCGAC | 1 cut(s) | 173 |
| SaqAI | TTAA | 2 cut(s) | 53, 207 |
| Sau3AI | GATC | 1 cut(s) | 193 |
| SchI | GAGTC | 1 cut(s) | 73 |
| ScrFI | CCNGG | 1 cut(s) | 179 |
| SetI | ASST | 3 cut(s) | 117, 144, 174 |
| SfaNI | GCATC | 2 cut(s) | 3, 145 |
| SmlI | CTYRAG | 1 cut(s) | 143 |
| SmoI | CTYRAG | 1 cut(s) | 143 |
| Sse9I | AATT | 1 cut(s) | 65 |
| SspMI | CTAG | 1 cut(s) | 107 |
| StyD4I | CCNGG | 1 cut(s) | 177 |
| TaqI | TCGA | 1 cut(s) | 174 |
| TasI | AATT | 1 cut(s) | 65 |
| Tru1I | TTAA | 2 cut(s) | 53, 207 |
| Tru9I | TTAA | 2 cut(s) | 53, 207 |
| Tth111I | GACNNNGTC | 1 cut(s) | 164 |
| XmiI | GTMKAC | 1 cut(s) | 174 |
| XspI | CTAG | 1 cut(s) | 107 |