Prolyl 4-hydroxylase alpha subunit homologues.
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51880 |
| fragaria_vesca | FvH4_7g28750 FvH4_7g28750 |
| malus_domestica | MD01G1193900.v1.1 |
| prunus_persica | Prupe.2G287700_v2.0.a1 |
| pyrus_communis | pycom01g20420 |
| rosa_chinensis | RchiOBHm_Chr1g0376301 |
| rosa_laevigata | RLG00000026613 |
| rosa_multiflora | Rmu_ssc0000116.1_g000061 |
| rosa_roxburghii | Rroxscaffold_4G00282220 |
| rosa_rugosa | Rorug01G0395100 Rorug01G0395200 Rorug01G0395300 Rorug01G0395300 Rorug01G0395400 |
| rosa_samantha | Rh1AG406500 Rh1BG370500 Rh1CG383300 Rh1DG400300 |
| rosa_wichuraiana | Rw1G036080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 70 |
| AgsI | TTSAA | 1 cut(s) | 154 |
| BccI | CCATC | 2 cut(s) | 120, 128 |
| BfmI | CTRYAG | 1 cut(s) | 103 |
| BisI | GCNGC | 1 cut(s) | 70 |
| BlsI | GCNGC | 1 cut(s) | 71 |
| BmiI | GGNNCC | 1 cut(s) | 31 |
| BpmI | CTGGAG | 1 cut(s) | 48 |
| BsaBI | GATNNNNATC | 1 cut(s) | 81 |
| Bse1I | ACTGG | 1 cut(s) | 188 |
| Bse8I | GATNNNNATC | 1 cut(s) | 81 |
| BseGI | GGATG | 2 cut(s) | 131, 139 |
| BseJI | GATNNNNATC | 1 cut(s) | 81 |
| BseNI | ACTGG | 1 cut(s) | 188 |
| Bsp143I | GATC | 1 cut(s) | 82 |
| BspACI | CCGC | 1 cut(s) | 70 |
| BspHI | TCATGA | 1 cut(s) | 111 |
| BspLI | GGNNCC | 1 cut(s) | 31 |
| BsrI | ACTGG | 1 cut(s) | 188 |
| BssMI | GATC | 1 cut(s) | 82 |
| BstF5I | GGATG | 2 cut(s) | 131, 139 |
| BstKTI | GATC | 1 cut(s) | 85 |
| BstMBI | GATC | 1 cut(s) | 82 |
| BstSFI | CTRYAG | 1 cut(s) | 103 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 183 |
| BtsCI | GGATG | 2 cut(s) | 131, 139 |
| CciI | TCATGA | 1 cut(s) | 111 |
| CseI | GACGC | 1 cut(s) | 155 |
| CviAII | CATG | 2 cut(s) | 112, 122 |
| CviJI | RGCY | 3 cut(s) | 32, 37, 69 |
| CviKI_1 | RGCY | 3 cut(s) | 32, 37, 69 |
| DpnI | GATC | 1 cut(s) | 84 |
| DpnII | GATC | 1 cut(s) | 82 |
| FaeI | CATG | 2 cut(s) | 115, 125 |
| FaiI | YATR | 2 cut(s) | 113, 123 |
| FatI | CATG | 2 cut(s) | 111, 121 |
| Fnu4HI | GCNGC | 1 cut(s) | 70 |
| FokI | GGATG | 2 cut(s) | 138, 146 |
| Fsp4HI | GCNGC | 1 cut(s) | 70 |
| GluI | GCNGC | 1 cut(s) | 70 |
| GsuI | CTGGAG | 1 cut(s) | 48 |
| HgaI | GACGC | 1 cut(s) | 155 |
| Hin1II | CATG | 2 cut(s) | 115, 125 |
| HincII | GTYRAC | 1 cut(s) | 145 |
| HindII | GTYRAC | 1 cut(s) | 145 |
| HinfI | GANTC | 1 cut(s) | 108 |
| Hpy166II | GTNNAC | 1 cut(s) | 145 |
| Hpy188III | TCNNGA | 2 cut(s) | 27, 112 |
| Hpy8I | GTNNAC | 1 cut(s) | 145 |
| Hsp92II | CATG | 2 cut(s) | 115, 125 |
| Kzo9I | GATC | 1 cut(s) | 82 |
| LmnI | GCTCC | 1 cut(s) | 29 |
| LpnPI | CCDG | 2 cut(s) | 12, 169 |
| MaeIII | GTNAC | 1 cut(s) | 19 |
| MalI | GATC | 1 cut(s) | 84 |
| MboI | GATC | 1 cut(s) | 82 |
| MmeI | TCCRAC | 1 cut(s) | 111 |
| NdeII | GATC | 1 cut(s) | 82 |
| NlaIII | CATG | 2 cut(s) | 115, 125 |
| NlaIV | GGNNCC | 1 cut(s) | 31 |
| NmuCI | GTSAC | 1 cut(s) | 19 |
| PagI | TCATGA | 1 cut(s) | 111 |
| PfeI | GAWTC | 1 cut(s) | 108 |
| PkrI | GCNGC | 1 cut(s) | 71 |
| PspN4I | GGNNCC | 1 cut(s) | 31 |
| SatI | GCNGC | 1 cut(s) | 70 |
| Sau3AI | GATC | 1 cut(s) | 82 |
| SetI | ASST | 1 cut(s) | 144 |
| SfcI | CTRYAG | 1 cut(s) | 103 |
| SgeI | CNNG | 9 cut(s) | 39, 46, 62, 78, 86, 98, 124, 134, 173 |
| SsiI | CCGC | 1 cut(s) | 70 |
| TaqI | TCGA | 1 cut(s) | 9 |
| TauI | GCSGC | 1 cut(s) | 72 |
| TfiI | GAWTC | 1 cut(s) | 108 |
| TseFI | GTSAC | 1 cut(s) | 19 |
| Tsp45I | GTSAC | 1 cut(s) | 19 |
| TspDTI | ATGAA | 2 cut(s) | 100, 128 |