Rorug02G0043100

Zinc finger CCHC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0007741
Physical Location & Seq
Reverse (-)
3380926 .. 3384234
3309 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0043100.1

Sequence Viewer

Length: 1959 bp
ATGAGTGTAAGATTTAGATGCGTGGTTGGGTTTTTGGCTACGTTTCTGCTCCTGGGTCGGGTCACTTCGGAGCCGACGCAGGACAAGCAAGCCTTGCTCGCGTTCATAAATCAGACGCCACACGCGAACCGGGTACAGTGGAACAATTCGGTCTCGGCCTGCAGCTGGGTGGGAGTGAGGTGCGATGGGAATCAGTCGTATGTGGAATCACTTCACCTTCCCGGTGTTGGGCTTGTGGGTCCTATTCCACCCAACACCCTCGGCCGGCTGAGTCAGCTCCGAGTTCTCAGTCTTCGATCCAATAAGCTCACCGGTTCAGTGCCGCCCGATTTCGCCAACTTGACAGTGCTTCGGAATCTCTACCTCCAAGATAATGAGTTGTCCGGCCAGTTTCCGCCCGGGTTGACTCTCTTGGCGAGGCTGAACCGGCTCGATCTCAGCTCTAACAACTTCACCGGCTCAATCCCTTTTTCGGTCAACAATCTCACGCAGCTGACCGGACTTTTTCTACAAAACAATGAGTTTTCCGGCGCTTTGCCCAGCATCTCAACTGGTAAATTGCAGAGCTTCAACGTTTCAAACAACAAGCTCAATGGCTCGATCCCTACGAGCCTAGCCAAGTTCCCAAGTTCCGCATTCACCGGAAACTTAGATCTATGCGGCGGCCCATTGCGGTCGTGTAATCCATTTTTCCCAGCACCCGCACCGGCGCCCGTCACTCCGCCGATAGTCCCAGCCCACAACAAGTCCAAAAAGCTCTCCACCGCCGCCATTATCGCCATCGTAGTGGGTTCCATTTTGGGTTTCTGCCTTCTACTTCTGATTCTCCTGCTCTGCCTCAGAAAACGCCGCCGTCAACACTCCCCCAAGTCTCCCAAACCTCCCGTCACCGCGGCACGCTCCGTCACCGCGGCGGAGGCCGGAACGTCTTCCTCCAAGGACGACATCACCGGCGCGTCTACCGAGGCGGAGAGGAACAAGCTGGTCTTCTTCAACGGCGGGATTTACAGCTTCGACTTAGAAGACTTGTTGCGGGCCTCGGCCGAGGTTCTGGGCAAAGGAAGCGTCGGGACGTCGTACAAGGCGGTGCTGGAAGAAGGAACCACGGTGGTGGTGAAGAGGCTAAAAGACGTGGTGGTGACCAAAAAAGAGTTCGATATGCAAATGGAGGTTCTGGGTAAAATCAAGCACGAAAATGTGGTTCCATTGAGGGCATTCTACTTCTCTAAAGATGAGAAACTCCTCGTCTACGATTACATGACCGCCGGTAGCTTGTCTGTTCTTCTTCACGGGAGTAGAGGCTCAGGTCGCACCCCACTGGACTGGGACAACCGGATGAGAATCGCGCTAAGTGCCGCGAGAGGCTTAGCGCACCTCCACGTGGCGGGTAAAGTGGTCCACGGCAACATTAAGTCTTCCAACATCCTGCTACGACCCGATCACGACGCGACAGTTTCAGACTTCGGGCTGAACCCACTGTTCGGGACCTCCACCCCGCCCAACCGGGTCGCGGGCTACCGCGCTCCGGAGGTGGTGGAGACCCGAAAGGTCACGTTCAAGTCCGACGTGTACAGCTTTGGGGTGTTGTTGTTAGAGCTATTAACGGGGAAAGCACCCAATCAGGCTTCCTTGGGAGAAGAGGGAATTGACCTACCGAGGTGGGTCCAGTCCGTGGTCCGTGAGGAATGGACCGCTGAGGTGTTCGACGTGGAGCTAATGAGGTACCAAAACATTGAGGAGGAGATGGTTCAGCTTTTGCAAATAGCCATGGCTTGTGTGTCCACGGTCCCCGATCAACGGCCCGCAATGCAGGAGGTGGTCCGTATGATTGAGGACATGAACCGGGCCGAAACCGACGACGGGTTACGACAGTCGTCGGATGACCCGTCAAAGGGATCAGACGGTCATACGCCTCCCCAAGGGTCCAGGACCCCACCAAGTGTCACACCCACACCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCHC_3

Protein Analysis

652

Amino Acids

70.78

Weight (kDa)

8.95

Isoelectric Point (pI)

45.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 62 1.2e-07 Leucine rich repeat N-terminal domain
LRR_8 PF13855 70 - 127 1.6e-07 Leucine rich repeat
LRR_14 PF23598 87 - 172 1.8e-06 Leucine-rich repeat region
PK_Tyr_Ser-Thr PF07714 349 - 609 5.2e-36 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 349 - 608 2.1e-35 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1076
Acc65I GGTACC 1 cut(s) 1722
AccB1I GGYRCC 2 cut(s) 709, 1722
AccB7I CCANNNNNTGG 1 cut(s) 1672
AccI GTMKAC 2 cut(s) 959, 1248
AccIII TCCGGA 1 cut(s) 1525
AclI AACGTT 1 cut(s) 573
AclWI GGATC 3 cut(s) 291, 595, 1903
AcoI YGGCCR 3 cut(s) 262, 385, 1041
AcvI CACGTG 1 cut(s) 1381
AcyI GRCGYC 3 cut(s) 116, 710, 1073
AdeI CACNNNGTG 1 cut(s) 1940
AfaI GTAC 4 cut(s) 135, 1079, 1571, 1724
AflIII ACRYGT 1 cut(s) 1566
AgeI ACCGGT 1 cut(s) 311
AgsI TTSAA 4 cut(s) 571, 579, 994, 1558
AjiI CACGTC 3 cut(s) 1132, 1567, 1708
AjnI CCWGG 2 cut(s) 51, 1925
AjuI GAANNNNNNNTTGG 2 cut(s) 1136, 1168
AleI CACNNNNGTG 1 cut(s) 1109
Alw26I GTCTC 3 cut(s) 157, 876, 1532
AlwI GGATC 3 cut(s) 291, 595, 1903
Ama87I CYCGRG 1 cut(s) 398
Aor13HI TCCGGA 1 cut(s) 1525
AoxI GGCC 9 cut(s) 156, 262, 385, 664, 918, 1035, 1041, 1799, 1845
ApeKI GCWGC 2 cut(s) 162, 490
ArsI GACNNNNNNTTYG 4 cut(s) 870, 902, 1050, 1082
AsiGI ACCGGT 1 cut(s) 311
Asp700I GAANNNNTTC 2 cut(s) 210, 928
Asp718I GGTACC 1 cut(s) 1722
AspLEI GCGC 6 cut(s) 533, 712, 956, 1348, 1372, 1523
AsuC2I CCSGG 6 cut(s) 131, 222, 399, 400, 1505, 1844
AsuHPI GGTGA 9 cut(s) 206, 301, 445, 631, 880, 898, 940, 1126, 1150
AvaI CYCGRG 1 cut(s) 398
BanI GGYRCC 2 cut(s) 709, 1722
BbrPI CACGTG 1 cut(s) 1381
BbsI GAAGAC 5 cut(s) 284, 921, 979, 1029, 1407
BbvCI CCTCAGC 1 cut(s) 1695
BbvI GCAGC 2 cut(s) 174, 502
BccI CCATC 3 cut(s) 179, 788, 1738
BceAI ACGGC 4 cut(s) 837, 1012, 1417, 1814
BciT130I CCWGG 2 cut(s) 53, 1927
BcnI CCSGG 6 cut(s) 131, 222, 399, 400, 1505, 1844
BcoDI GTCTC 3 cut(s) 157, 876, 1532
BfaI CTAG 1 cut(s) 614
BfmI CTRYAG 1 cut(s) 160
BfoI RGCGCY 2 cut(s) 534, 713
BglII AGATCT 1 cut(s) 652
BlpI GCTNAGC 1 cut(s) 1366
Bme1390I CCNGG 8 cut(s) 53, 131, 222, 399, 400, 1505, 1844, 1927
BmeT110I CYCGRG 1 cut(s) 398
BmgBI CACGTC 3 cut(s) 1132, 1567, 1708
BmrFI CCNGG 8 cut(s) 53, 131, 222, 399, 400, 1505, 1844, 1927
BmrI ACTGGG 1 cut(s) 1333
BmsI GCATC 2 cut(s) 8, 552
BmuI ACTGGG 1 cut(s) 1333
BoxI GACNNNNGTC 1 cut(s) 1873
BpiI GAAGAC 5 cut(s) 284, 921, 979, 1029, 1407
Bpu10I CCTNAGC 2 cut(s) 1303, 1695
Bpu1102I GCTNAGC 1 cut(s) 1366
BpuMI CCSGG 6 cut(s) 131, 222, 399, 400, 1505, 1844
BsaAI YACGTR 1 cut(s) 1381
BsaBI GATNNNNATC 2 cut(s) 189, 1340
BsaHI GRCGYC 3 cut(s) 116, 710, 1073
BsaI GGTCTC 2 cut(s) 157, 1532
BsaWI WCCGGW 5 cut(s) 311, 497, 641, 1332, 1525
Bse118I RCCGGY 7 cut(s) 264, 311, 426, 455, 706, 950, 1265
Bse1I ACTGG 5 cut(s) 388, 556, 1323, 1328, 1666
Bse3DI GCAATG 2 cut(s) 668, 1812
Bse8I GATNNNNATC 2 cut(s) 189, 1340
BseAI TCCGGA 1 cut(s) 1525
BseBI CCWGG 2 cut(s) 53, 1927
BseGI GGATG 3 cut(s) 1341, 1422, 1885
BseJI GATNNNNATC 2 cut(s) 189, 1340
BseMI GCAATG 2 cut(s) 668, 1812
BseMII CTCAG 6 cut(s) 260, 301, 451, 853, 1317, 1686
BseNI ACTGG 5 cut(s) 388, 556, 1323, 1328, 1666
BseRI GAGGAG 3 cut(s) 1232, 1751, 1754
BseX3I CGGCCG 2 cut(s) 262, 1041
BseXI GCAGC 2 cut(s) 174, 502
BseYI CCCAGC 4 cut(s) 165, 539, 694, 733
Bsh1285I CGRYCG 3 cut(s) 265, 677, 1044
BshFI GGCC 9 cut(s) 158, 264, 387, 666, 920, 1037, 1043, 1801, 1847
BshNI GGYRCC 2 cut(s) 709, 1722
BshTI ACCGGT 1 cut(s) 311
BsiEI CGRYCG 3 cut(s) 265, 677, 1044
BsiHKCI CYCGRG 1 cut(s) 398
BslFI GGGAC 5 cut(s) 716, 1084, 1340, 1498, 1772
BsmAI GTCTC 3 cut(s) 157, 876, 1532
BsmFI GGGAC 5 cut(s) 716, 1084, 1340, 1498, 1772
BsmI GAATGC 2 cut(s) 635, 1214
BsnI GGCC 9 cut(s) 158, 264, 387, 666, 920, 1037, 1043, 1801, 1847
Bso31I GGTCTC 2 cut(s) 157, 1532
BsoBI CYCGRG 1 cut(s) 398
Bsp13I TCCGGA 1 cut(s) 1525
Bsp1407I TGTACA 1 cut(s) 1569
Bsp143I GATC 7 cut(s) 296, 433, 600, 652, 1438, 1792, 1895
Bsp1720I GCTNAGC 1 cut(s) 1366
Bsp19I CCATGG 1 cut(s) 1767
BspANI GGCC 9 cut(s) 158, 264, 387, 666, 920, 1037, 1043, 1801, 1847
BspCNI CTCAG 6 cut(s) 261, 300, 450, 852, 1316, 1687
BspEI TCCGGA 1 cut(s) 1525
BspMAI CTGCAG 1 cut(s) 164
BspPI GGATC 3 cut(s) 291, 595, 1903
BspT107I GGYRCC 2 cut(s) 709, 1722
BspTNI GGTCTC 2 cut(s) 157, 1532
BsrDI GCAATG 2 cut(s) 668, 1812
BsrFI RCCGGY 7 cut(s) 264, 311, 426, 455, 706, 950, 1265
BsrGI TGTACA 1 cut(s) 1569
BsrI ACTGG 5 cut(s) 388, 556, 1323, 1328, 1666
BssAI RCCGGY 7 cut(s) 264, 311, 426, 455, 706, 950, 1265
BssMI GATC 7 cut(s) 296, 433, 600, 652, 1438, 1792, 1895
BssNI GRCGYC 3 cut(s) 116, 710, 1073
BssT1I CCWWGG 4 cut(s) 936, 1629, 1767, 1918
Bst2UI CCWGG 2 cut(s) 53, 1927
Bst4CI ACNGT 8 cut(s) 138, 346, 1108, 1453, 1479, 1786, 1872, 1904
Bst6I CTCTTC 2 cut(s) 1112, 1632
BstACI GRCGYC 3 cut(s) 116, 710, 1073
BstAPI GCANNNNNTGC 1 cut(s) 94
BstAUI TGTACA 1 cut(s) 1569
BstBAI YACGTR 1 cut(s) 1381
BstC8I GCNNGC 8 cut(s) 90, 99, 160, 266, 898, 1035, 1513, 1803
BstDSI CCRYGG 7 cut(s) 891, 909, 1104, 1399, 1671, 1767, 1782
BstEII GGTNACC 1 cut(s) 1138
BstENI CCTNNNNNAGG 1 cut(s) 1917
BstF5I GGATG 3 cut(s) 1341, 1422, 1885
BstH2I RGCGCY 2 cut(s) 534, 713
BstHHI GCGC 6 cut(s) 533, 712, 956, 1348, 1372, 1523
BstKTI GATC 7 cut(s) 299, 436, 603, 655, 1441, 1795, 1898
BstMAI GTCTC 3 cut(s) 157, 876, 1532
BstMBI GATC 7 cut(s) 296, 433, 600, 652, 1438, 1792, 1895
BstMCI CGRYCG 3 cut(s) 265, 677, 1044
BstNI CCWGG 2 cut(s) 53, 1927
BstPAI GACNNNNGTC 1 cut(s) 1873
BstPI GGTNACC 1 cut(s) 1138
BstSCI CCNGG 8 cut(s) 51, 129, 220, 397, 398, 1503, 1842, 1925
BstSFI CTRYAG 1 cut(s) 160
BstV1I GCAGC 2 cut(s) 174, 502
BstV2I GAAGAC 5 cut(s) 284, 921, 979, 1029, 1407
BstX2I RGATCY 1 cut(s) 652
BstXI CCANNNNNNTGG 3 cut(s) 787, 1111, 1323
BstYI RGATCY 1 cut(s) 652
BstZI CGGCCG 2 cut(s) 262, 1041
BsuRI GGCC 9 cut(s) 158, 264, 387, 666, 920, 1037, 1043, 1801, 1847
BtgI CCRYGG 7 cut(s) 891, 909, 1104, 1399, 1671, 1767, 1782
BtgZI GCGATG 1 cut(s) 198
BtrI CACGTC 3 cut(s) 1132, 1567, 1708
BtsCI GGATG 3 cut(s) 1341, 1422, 1885
BtsIMutI CAGTG 5 cut(s) 143, 324, 351, 1316, 1475
Cac8I GCNNGC 8 cut(s) 90, 99, 160, 266, 898, 1035, 1513, 1803
CfoI GCGC 6 cut(s) 533, 712, 956, 1348, 1372, 1523
Cfr10I RCCGGY 7 cut(s) 264, 311, 426, 455, 706, 950, 1265
Cfr42I CCGCGG 2 cut(s) 894, 912
Cfr9I CCCGGG 1 cut(s) 398
CseI GACGC 5 cut(s) 85, 124, 945, 1054, 1454
Csp6I GTAC 4 cut(s) 134, 1078, 1570, 1723
CspAI ACCGGT 1 cut(s) 311
CviAII CATG 3 cut(s) 1258, 1768, 1837
CviQI GTAC 4 cut(s) 134, 1078, 1570, 1723
DinI GGCGCC 1 cut(s) 711
DpnI GATC 7 cut(s) 298, 435, 602, 654, 1440, 1794, 1897
DpnII GATC 7 cut(s) 296, 433, 600, 652, 1438, 1792, 1895
DraIII CACNNNGTG 1 cut(s) 1940
EaeI YGGCCR 3 cut(s) 262, 385, 1041
EagI CGGCCG 2 cut(s) 262, 1041
Eam1104I CTCTTC 2 cut(s) 1112, 1632
EarI CTCTTC 2 cut(s) 1112, 1632
EciI GGCGGA 4 cut(s) 384, 711, 929, 983
EclXI CGGCCG 2 cut(s) 262, 1041
Eco130I CCWWGG 4 cut(s) 936, 1629, 1767, 1918
Eco31I GGTCTC 2 cut(s) 157, 1532
Eco52I CGGCCG 2 cut(s) 262, 1041
Eco72I CACGTG 1 cut(s) 1381
Eco88I CYCGRG 1 cut(s) 398
Eco91I GGTNACC 1 cut(s) 1138
EcoNI CCTNNNNNAGG 1 cut(s) 1917
EcoO109I RGGNCCY 3 cut(s) 239, 1485, 1929
EcoO65I GGTNACC 1 cut(s) 1138
EcoRII CCWGG 2 cut(s) 51, 1925
EcoT14I CCWWGG 4 cut(s) 936, 1629, 1767, 1918
EgeI GGCGCC 1 cut(s) 711
EheI GGCGCC 1 cut(s) 711
ErhI CCWWGG 4 cut(s) 936, 1629, 1767, 1918
FaeI CATG 3 cut(s) 1261, 1771, 1840
FaiI YATR 9 cut(s) 107, 201, 658, 1160, 1259, 1769, 1826, 1838, 1908
FalI AAGNNNNNCTT 4 cut(s) 77, 109, 971, 1003
FaqI GGGAC 5 cut(s) 716, 1084, 1340, 1498, 1772
FatI CATG 3 cut(s) 1257, 1767, 1836
FauI CCCGC 7 cut(s) 709, 992, 1026, 1378, 1503, 1504, 1810
FblI GTMKAC 2 cut(s) 959, 1248
FokI GGATG 3 cut(s) 1348, 1409, 1892
FspBI CTAG 1 cut(s) 614
GlaI GCGC 6 cut(s) 532, 711, 955, 1347, 1371, 1522
GsaI CCCAGC 4 cut(s) 169, 543, 698, 737
HaeII RGCGCY 2 cut(s) 534, 713
HaeIII GGCC 9 cut(s) 158, 264, 387, 666, 920, 1037, 1043, 1801, 1847
HgaI GACGC 5 cut(s) 85, 124, 945, 1054, 1454
HhaI GCGC 6 cut(s) 533, 712, 956, 1348, 1372, 1523
Hin1I GRCGYC 3 cut(s) 116, 710, 1073
Hin1II CATG 3 cut(s) 1261, 1771, 1840
Hin6I GCGC 6 cut(s) 531, 710, 954, 1346, 1370, 1521
HinP1I GCGC 6 cut(s) 531, 710, 954, 1346, 1370, 1521
HincII GTYRAC 3 cut(s) 405, 478, 857
HindII GTYRAC 3 cut(s) 405, 478, 857
HinfI GANTC 7 cut(s) 190, 206, 271, 355, 406, 823, 1341
HphI GGTGA 9 cut(s) 206, 301, 445, 631, 880, 898, 940, 1126, 1150
Hpy166II GTNNAC 8 cut(s) 405, 478, 857, 960, 1249, 1399, 1570, 1782
Hpy188III TCNNGA 4 cut(s) 1069, 1442, 1483, 1526
Hpy8I GTNNAC 8 cut(s) 405, 478, 857, 960, 1249, 1399, 1570, 1782
Hpy99I CGWCG 9 cut(s) 79, 1070, 1078, 1448, 1568, 1709, 1859, 1862, 1879
HpyAV CCTTC 3 cut(s) 227, 821, 1091
HpyCH4III ACNGT 8 cut(s) 138, 346, 1108, 1453, 1479, 1786, 1872, 1904
HpyCH4IV ACGT 9 cut(s) 41, 573, 926, 1073, 1131, 1380, 1553, 1566, 1707
HpyCH4V TGCA 5 cut(s) 162, 562, 1162, 1759, 1810
HpySE526I ACGT 9 cut(s) 41, 573, 926, 1073, 1131, 1380, 1553, 1566, 1707
Hsp92I GRCGYC 3 cut(s) 116, 710, 1073
Hsp92II CATG 3 cut(s) 1261, 1771, 1840
HspAI GCGC 6 cut(s) 531, 710, 954, 1346, 1370, 1521
KasI GGCGCC 1 cut(s) 709
Kpn2I TCCGGA 1 cut(s) 1525
KpnI GGTACC 1 cut(s) 1726
KroI GCCGGC 1 cut(s) 264
KroNI GCCGGC 1 cut(s) 266
KspI CCGCGG 2 cut(s) 894, 912
Kzo9I GATC 7 cut(s) 296, 433, 600, 652, 1438, 1792, 1895
LmnI GCTCC 6 cut(s) 54, 70, 282, 905, 1528, 1711
Lsp1109I GCAGC 2 cut(s) 174, 502
LweI GCATC 2 cut(s) 8, 552
MaeI CTAG 1 cut(s) 614
MaeII ACGT 9 cut(s) 41, 573, 926, 1073, 1131, 1380, 1553, 1566, 1707
MaeIII GTNAC 8 cut(s) 61, 715, 886, 904, 1138, 1549, 1863, 1942
MalI GATC 7 cut(s) 298, 435, 602, 654, 1440, 1794, 1897
MboI GATC 7 cut(s) 296, 433, 600, 652, 1438, 1792, 1895
MflI RGATCY 1 cut(s) 652
MluCI AATT 3 cut(s) 145, 557, 1644
Mly113I GGCGCC 1 cut(s) 710
MlyI GAGTC 2 cut(s) 280, 400
MmeI TCCRAC 3 cut(s) 1443, 1587, 1857
MroI TCCGGA 1 cut(s) 1525
MroNI GCCGGC 1 cut(s) 264
MroXI GAANNNNTTC 2 cut(s) 210, 928
MseI TTAA 3 cut(s) 1410, 1601, 1957
MslI CAYNNNNRTG 3 cut(s) 785, 1109, 1194
MspA1I CMGCKG 5 cut(s) 165, 493, 893, 911, 1694
MspR9I CCNGG 8 cut(s) 53, 131, 222, 399, 400, 1505, 1844, 1927
Mva1269I GAATGC 2 cut(s) 635, 1214
MvaI CCWGG 2 cut(s) 53, 1927
NaeI GCCGGC 1 cut(s) 266
NarI GGCGCC 1 cut(s) 710
NciI CCSGG 6 cut(s) 131, 222, 399, 400, 1505, 1844
NcoI CCATGG 1 cut(s) 1767
NdeII GATC 7 cut(s) 296, 433, 600, 652, 1438, 1792, 1895
NgoMIV GCCGGC 1 cut(s) 264
NlaIII CATG 3 cut(s) 1261, 1771, 1840
NmeAIII GCCGAG 4 cut(s) 134, 240, 1019, 1069
NmuCI GTSAC 7 cut(s) 61, 715, 886, 904, 1138, 1549, 1942
OliI CACNNNNGTG 1 cut(s) 1109
PcsI WCGNNNNNNNCGW 3 cut(s) 122, 605, 1883
PctI GAATGC 2 cut(s) 635, 1214
PdiI GCCGGC 1 cut(s) 266
PdmI GAANNNNTTC 2 cut(s) 210, 928
PfeI GAWTC 5 cut(s) 190, 206, 355, 823, 1341
PflMI CCANNNNNTGG 1 cut(s) 1672
PfoI TCCNGGA 1 cut(s) 1925
PinAI ACCGGT 1 cut(s) 311
PleI GAGTC 2 cut(s) 279, 400
PluTI GGCGCC 1 cut(s) 713
PmaCI CACGTG 1 cut(s) 1381
PmlI CACGTG 1 cut(s) 1381
PpsI GAGTC 2 cut(s) 279, 400
Ppu21I YACGTR 1 cut(s) 1381
PpuMI RGGWCCY 3 cut(s) 239, 1485, 1929
PshAI GACNNNNGTC 1 cut(s) 1873
Psp1406I AACGTT 1 cut(s) 573
Psp5II RGGWCCY 3 cut(s) 239, 1485, 1929
Psp6I CCWGG 2 cut(s) 51, 1925
PspCI CACGTG 1 cut(s) 1381
PspEI GGTNACC 1 cut(s) 1138
PspFI CCCAGC 4 cut(s) 165, 539, 694, 733
PspGI CCWGG 2 cut(s) 51, 1925
PspPPI RGGWCCY 3 cut(s) 239, 1485, 1929
PstI CTGCAG 1 cut(s) 164
PsuI RGATCY 1 cut(s) 652
PvuII CAGCTG 2 cut(s) 165, 493
RsaI GTAC 4 cut(s) 135, 1079, 1571, 1724
RsaNI GTAC 4 cut(s) 134, 1078, 1570, 1723
RseI CAYNNNNRTG 3 cut(s) 785, 1109, 1194
SacII CCGCGG 2 cut(s) 894, 912
SaqAI TTAA 3 cut(s) 1410, 1601, 1957
Sau3AI GATC 7 cut(s) 296, 433, 600, 652, 1438, 1792, 1895
SchI GAGTC 2 cut(s) 280, 400
ScrFI CCNGG 8 cut(s) 53, 131, 222, 399, 400, 1505, 1844, 1927
SfaNI GCATC 2 cut(s) 8, 552
SfcI CTRYAG 1 cut(s) 160
SfoI GGCGCC 1 cut(s) 711
Sfr303I CCGCGG 2 cut(s) 894, 912
SgrAI CRCCGGYG 2 cut(s) 706, 950
SgrBI CCGCGG 2 cut(s) 894, 912
SmaI CCCGGG 1 cut(s) 400
SmiMI CAYNNNNRTG 3 cut(s) 785, 1109, 1194
Sse9I AATT 3 cut(s) 145, 557, 1644
SspDI GGCGCC 1 cut(s) 709
SspMI CTAG 1 cut(s) 614
StyD4I CCNGG 8 cut(s) 51, 129, 220, 397, 398, 1503, 1842, 1925
StyI CCWWGG 4 cut(s) 936, 1629, 1767, 1918
TaaI ACNGT 8 cut(s) 138, 346, 1108, 1453, 1479, 1786, 1872, 1904
TaiI ACGT 9 cut(s) 44, 576, 929, 1076, 1134, 1383, 1556, 1569, 1710
TaqI TCGA 6 cut(s) 295, 432, 599, 1014, 1155, 1704
TaqII GACCGA 2 cut(s) 139, 463
TasI AATT 3 cut(s) 145, 557, 1644
TatI WGTACW 1 cut(s) 1569
TauI GCSGC 8 cut(s) 325, 663, 666, 770, 852, 896, 914, 1358
TfiI GAWTC 5 cut(s) 190, 206, 355, 823, 1341
Tru1I TTAA 3 cut(s) 1410, 1601, 1957
Tru9I TTAA 3 cut(s) 1410, 1601, 1957
TscAI CASTG 5 cut(s) 143, 324, 351, 1323, 1482
TseFI GTSAC 7 cut(s) 61, 715, 886, 904, 1138, 1549, 1942
TseI GCWGC 2 cut(s) 162, 490
Tsp45I GTSAC 7 cut(s) 61, 715, 886, 904, 1138, 1549, 1942
TspDTI ATGAA 2 cut(s) 94, 1853
TspGWI ACGGA 4 cut(s) 892, 1660, 1667, 1811
TspMI CCCGGG 1 cut(s) 398
TspRI CASTG 5 cut(s) 143, 324, 351, 1323, 1482
Van91I CCANNNNNTGG 1 cut(s) 1672
XagI CCTNNNNNAGG 1 cut(s) 1917
XmaI CCCGGG 1 cut(s) 398
XmiI GTMKAC 2 cut(s) 959, 1248
XmnI GAANNNNTTC 2 cut(s) 210, 928
XspI CTAG 1 cut(s) 614
ZraI GACGTC 1 cut(s) 1074
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.