Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004315

Physical Location & Seq

Genomic Coordinates Reverse (-)

19429902 .. 19436429

Gene Structure 6528 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0207100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGAAGGCGGCGTTGATCAGCACCGCCATTCCTTGGCAGCCTCCGCCGCACCATAAGCCTCTCAAACCCCTTTGTTGCTCCAAGGTTAACGGAGCCTCCTCGTCGCCGTCGCCGTCATCCTCCTCCTCACGAATCAAGTTGCAAGGCAGCGAAAATGCTGAGCTCCCTCAGCCTCGGATTCAGTCTGGGGAAGCGAAGGAGACTGACGTTTGGCGACTCTTCAGAGAAGCTCAGAAGAATATTCTGCATTTGAACCAGCATCGGCTTAAGGCCGTCGAGGATCTGAACAAAACAAACAGTGAGAAGCAGCTGCTGATTGATAAGATTGAGCAGTTGGAGCGGGAAAAGCAGGCTTCTGTTGGAAAGCCTCAAGATAGGCTCTCAAGTTGTTGGGAAGTACTCCTTCGGATAGACTCAATGGTCCTCACTAGAACGATTGCTGCCGGGGAGGCATCTGATTTGAGAAGGCTGGTCATGGATCACAAAATGAGTCTAGCTGAAGTTTTTGATGGCACCTTGCAGAAGACAGATGCCGAGCTTCTAGCTGAACTGAGACACTTCTTTGCAAGAAGCAGAAGGAATGGCTTTCACATTGTGCACATATGTACGGAAATGGCACCACTGGTCTCTGTTGGATCTTTGGCATCATATGTGACTGGCTTGTCTCGTGCACTACAGAGGAAGGGGCATTTGGTGGAGGTGATACTTCCAAAGTATTCAAGCCTGGACCTAGATGAAATTCAAGGGCTACAAGAGATTGAGGCAGAGTCCTTTTCATATTTCAATGGTCAACTTCATGGAAACAGAATTTGGACTGGTGTTGTCTATGGCATTGGAGTTACCTTAATTCAACCTCTAGAGTATTCAGAGTTTTTCAATCGTGAAAAGGTGTATGGCTACTCAGATGACTTTGAAAGGTTTACCTATTTCTCTCGTGCTTCATTGGATTATATTGTTAAGTGTGGAAAGCAACCTGATGTGATACATATCCATAACTGGGAGACTGCTATTATTGGGCCACTTTTCTGGGATATTTTTGCTAACCAGGGACTTGAAGGTACGAGAATCTTATTGACATGCCATGACCTGAATTCACAGTGCCTTGAGCATCCAGATAAACTAGCGTTATGCGGACTTGATCCTTCTTCACTTCACCGTCCTGATCGCTTGCAAGATAATACTAAGTCACATTTGGTTAATATTTTGAAGGGTGGAGTTGTTTACTCCAATAATGTTGTCATAATGTCCTCCATACTATCAAAAGGCAGGGTTATACATACTCTGAGTCATGGGTTGGACCCTACCTTAAACATTCACAAGAACAAGTTGGTTGTTTCTCCTTGTGGATTTGACAATTCCACCTGGGATCCATCCAAGGACAGCTTTCTTCCCCAAAATTTCAATGTCGAAGATATGGAAGGGAAAGCAGTTTGCAAAGCTGCATTGCAGCAGCACCTTGGGTTATCAGAGCATGCTTCTACCATTCTTATTGGATGCATTGTGTCTGAAGATGTTGATCTGGAGAACATGAGGGCAGTAATCATGAAAGCTAGCAAGAGCGATGTACAGTTCATCATCATGGGTACTAGCAAATTATCAAGTATACACAAGCTTGGATCATTGCAGGAACCACTGAAGGATGAACAAGTGAAATTCGTAAATGAGTGTGATGCAGCAATAACACATTTGGTTTTTGCCGGATCTGATATTATCTTGTGCCAATCTTTTCATGACCCTGTTCTCCAAGTTCCATTAAAGGCTTTAAAGTACGGAGCTGCTCCAATTGCATTAAACTCCTCCCATGACAACTTCAGGAACTTTGCAGAACATGACTATGAGACTACTAATTTCTCACGTTTCATCAGCTCTACCTTTGGAAATATGTCCATAAGCGAAGTGCTGGATGGGATGAAAAACCACCCCTCGAAGTGGAAGAGAAAAATACTGGACGCCATGGAAATGGACTTCTCATGGGATGCTGAGTGCTGTGACGTCCACTGTTCTGCTTACACTGCTATAAAGAAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0004765 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009507 GO:0009536 GO:0009987 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019438 GO:0019632 GO:0019752 GO:0032787 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

SKI

Protein Analysis

676

Amino Acids

75.68

Weight (kDa)

6.34

Isoelectric Point (pI)

45.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	197 - 419	1.2e-39	Starch synthase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004315)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21940 AT2G21940 AT2G21940 AT2G21940 AT2G21940 AT2G21940 AT2G21940 AT4G39540 AT4G39540 AT4G39540
malus_domestica	MD01G1019500.v1.1 MD15G1332900.v1.1
prunus_persica	Prupe.6G172800_v2.0.a1 Prupe.6G172800_v2.0.a1
pyrus_communis	pycom01g04900 pycom15g29260
rosa_chinensis	RchiOBHm_Chr2g0116491 RchiOBHm_Chr2g0116501 RchiOBHm_Chr2g0116521 RchiOBHm_Chr6g0259311
rosa_laevigata	RLG00000018276 RLG00000018279
rosa_multiflora	Rmu_sc0004191.1_g000047 Rmu_sc0018630.1_g000001 Rmu_ssc0000050.1_g000062
rosa_roxburghii	Rroxscaffold_2G00127140 Rroxscaffold_2G00127150
rosa_rugosa	Rorug02G0207100 Rorug05G0587200
rosa_samantha	Rh2CG268700
rosa_wichuraiana	Rw2G020620 Rw2G020630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	419, 661
AatII	GACGTC	1 cut(s)	1995
AccB1I	GGYRCC	2 cut(s)	512, 616
AccB7I	CCANNNNNTGG	1 cut(s)	33
AccBSI	CCGCTC	1 cut(s)	340
AccI	GTMKAC	1 cut(s)	1603
AciI	CCGC	6 cut(s)	8, 24, 44, 47, 340, 1131
AclWI	GGATC	8 cut(s)	288, 486, 643, 1133, 1361, 1374, 1624, 1708
AcsI	RAATTY	5 cut(s)	738, 807, 1090, 1396, 1652
AcuI	CTGAAG	5 cut(s)	205, 519, 1527, 1655, 1795
AcyI	GRCGYC	2 cut(s)	1950, 1992
AdeI	CACNNNGTG	1 cut(s)	595
AfaI	GTAC	6 cut(s)	399, 607, 1060, 1566, 1585, 1769
AfiI	CCNNNNNNNGG	3 cut(s)	33, 997, 1929
AflII	CTTAAG	1 cut(s)	266
AjnI	CCWGG	3 cut(s)	723, 1044, 1361
AjuI	GAANNNNNNNTTGG	4 cut(s)	674, 706, 793, 825
Alw21I	GWGCWC	3 cut(s)	165, 600, 673
Alw26I	GTCTC	6 cut(s)	194, 547, 631, 669, 995, 1832
Alw44I	GTGCAC	2 cut(s)	596, 669
AlwI	GGATC	8 cut(s)	288, 486, 643, 1133, 1361, 1374, 1624, 1708
AlwNI	CAGNNNCTG	1 cut(s)	313
AoxI	GGCC	2 cut(s)	270, 1016
ApaLI	GTGCAC	2 cut(s)	596, 669
ApoI	RAATTY	5 cut(s)	738, 807, 1090, 1396, 1652
AspS9I	GGNCC	4 cut(s)	421, 727, 1016, 1297
AsuC2I	CCSGG	1 cut(s)	445
AsuHPI	GGTGA	2 cut(s)	712, 1145
AsuNHI	GCTAGC	1 cut(s)	1550
AvaII	GGWCC	3 cut(s)	421, 727, 1297
BaeGI	GKGCMC	2 cut(s)	600, 673
BamHI	GGATCC	1 cut(s)	1366
BanI	GGYRCC	2 cut(s)	512, 616
BanII	GRGCYC	1 cut(s)	165
BauI	CACGAG	2 cut(s)	666, 933
BbsI	GAAGAC	1 cut(s)	530
Bbv12I	GWGCWC	3 cut(s)	165, 600, 673
BbvCI	CCTCAGC	1 cut(s)	168
BccI	CCATC	3 cut(s)	503, 1378, 1898
BceAI	ACGGC	3 cut(s)	91, 97, 257
BciT130I	CCWGG	3 cut(s)	725, 1046, 1363
BclI	TGATCA	1 cut(s)	15
BcnI	CCSGG	1 cut(s)	445
BcoDI	GTCTC	6 cut(s)	194, 547, 631, 669, 995, 1832
BfaI	CTAG	8 cut(s)	429, 494, 542, 731, 857, 1121, 1551, 1587
BfmI	CTRYAG	1 cut(s)	674
BfrI	CTTAAG	1 cut(s)	266
BglI	GCCNNNNNGGC	1 cut(s)	449
BlpI	GCTNAGC	1 cut(s)	159
BmcAI	AGTACT	1 cut(s)	399
Bme1390I	CCNGG	4 cut(s)	445, 725, 1046, 1363
Bme18I	GGWCC	3 cut(s)	421, 727, 1297
BmgT120I	GGNCC	4 cut(s)	421, 727, 1016, 1297
BmiI	GGNNCC	6 cut(s)	94, 514, 618, 1299, 1368, 1629
BmrFI	CCNGG	4 cut(s)	445, 725, 1046, 1363
BmrI	ACTGGG	1 cut(s)	1006
BmsI	GCATC	8 cut(s)	268, 461, 520, 653, 1117, 1484, 1660, 1966
BmtI	GCTAGC	1 cut(s)	1554
BmuI	ACTGGG	1 cut(s)	1006
BpiI	GAAGAC	1 cut(s)	530
BpmI	CTGGAG	1 cut(s)	1541
Bpu10I	CCTNAGC	1 cut(s)	168
Bpu1102I	GCTNAGC	1 cut(s)	159
BpuEI	CTTGAG	3 cut(s)	354, 367, 1124
BpuMI	CCSGG	1 cut(s)	445
BsaBI	GATNNNNATC	2 cut(s)	986, 1515
BsaHI	GRCGYC	2 cut(s)	1950, 1992
BsaI	GGTCTC	1 cut(s)	631
BsaJI	CCNNGG	9 cut(s)	32, 81, 173, 444, 1045, 1362, 1374, 1456, 1953
BsaXI	ACNNNNNCTCC	2 cut(s)	80, 110
Bsc4I	CCNNNNNNNGG	3 cut(s)	33, 997, 1929
Bse1I	ACTGG	5 cut(s)	627, 661, 820, 1001, 1950
Bse3DI	GCAATG	2 cut(s)	1442, 1619
Bse8I	GATNNNNATC	2 cut(s)	986, 1515
BseBI	CCWGG	3 cut(s)	725, 1046, 1363
BseDI	CCNNGG	9 cut(s)	32, 81, 173, 444, 1045, 1362, 1374, 1456, 1953
BseGI	GGATG	8 cut(s)	116, 1108, 1370, 1499, 1645, 1909, 1914, 1981
BseJI	GATNNNNATC	2 cut(s)	986, 1515
BseLI	CCNNNNNNNGG	3 cut(s)	33, 997, 1929
BseMI	GCAATG	2 cut(s)	1442, 1619
BseMII	CTCAG	7 cut(s)	150, 182, 245, 542, 915, 1274, 1971
BseNI	ACTGG	5 cut(s)	627, 661, 820, 1001, 1950
BseRI	GAGGAG	4 cut(s)	88, 112, 115, 1786
BseSI	GKGCMC	2 cut(s)	600, 673
BshFI	GGCC	2 cut(s)	272, 1018
BshNI	GGYRCC	2 cut(s)	512, 616
BsiHKAI	GWGCWC	3 cut(s)	165, 600, 673
BsiSI	CCGG	2 cut(s)	444, 1698
BslFI	GGGAC	1 cut(s)	1062
BslI	CCNNNNNNNGG	3 cut(s)	33, 997, 1929
BsmAI	GTCTC	6 cut(s)	194, 547, 631, 669, 995, 1832
BsmFI	GGGAC	1 cut(s)	1062
BsnI	GGCC	2 cut(s)	272, 1018
Bso31I	GGTCTC	1 cut(s)	631
Bsp1286I	GDGCHC	3 cut(s)	165, 600, 673
Bsp1407I	TGTACA	1 cut(s)	1564
Bsp1720I	GCTNAGC	1 cut(s)	159
Bsp19I	CCATGG	1 cut(s)	1953
BspACI	CCGC	6 cut(s)	8, 24, 44, 47, 340, 1131
BspANI	GGCC	2 cut(s)	272, 1018
BspCNI	CTCAG	7 cut(s)	151, 181, 244, 543, 914, 1275, 1972
BspHI	TCATGA	3 cut(s)	1542, 1729, 2027
BspLI	GGNNCC	6 cut(s)	94, 514, 618, 1299, 1368, 1629
BspOI	GCTAGC	1 cut(s)	1554
BspPI	GGATC	8 cut(s)	288, 486, 643, 1133, 1361, 1374, 1624, 1708
BspT107I	GGYRCC	2 cut(s)	512, 616
BspTI	CTTAAG	1 cut(s)	266
BspTNI	GGTCTC	1 cut(s)	631
BsrBI	CCGCTC	1 cut(s)	340
BsrDI	GCAATG	2 cut(s)	1442, 1619
BsrGI	TGTACA	1 cut(s)	1564
BsrI	ACTGG	5 cut(s)	627, 661, 820, 1001, 1950
BssECI	CCNNGG	9 cut(s)	32, 81, 173, 444, 1045, 1362, 1374, 1456, 1953
BssNAI	GTATAC	1 cut(s)	1604
BssNI	GRCGYC	2 cut(s)	1950, 1992
BssSI	CACGAG	2 cut(s)	666, 933
BssT1I	CCWWGG	5 cut(s)	32, 81, 1374, 1456, 1953
Bst1107I	GTATAC	1 cut(s)	1604
Bst2BI	CACGAG	2 cut(s)	666, 933
Bst2UI	CCWGG	3 cut(s)	725, 1046, 1363
Bst4CI	ACNGT	5 cut(s)	299, 1098, 1157, 1569, 2000
Bst6I	CTCTTC	2 cut(s)	224, 1928
BstACI	GRCGYC	2 cut(s)	1950, 1992
BstAFI	CTTAAG	1 cut(s)	266
BstAUI	TGTACA	1 cut(s)	1564
BstC8I	GCNNGC	4 cut(s)	351, 1169, 1473, 1552
BstDEI	CTNAG	8 cut(s)	159, 168, 231, 551, 901, 1182, 1283, 1980
BstDSI	CCRYGG	1 cut(s)	1953
BstF5I	GGATG	8 cut(s)	116, 1108, 1370, 1499, 1645, 1909, 1914, 1981
BstMAI	GTCTC	6 cut(s)	194, 547, 631, 669, 995, 1832
BstMWI	GCNNNNNNNGC	9 cut(s)	43, 46, 55, 169, 337, 346, 449, 1784, 2012
BstNI	CCWGG	3 cut(s)	725, 1046, 1363
BstNSI	RCATGY	2 cut(s)	1080, 1475
BstSCI	CCNGG	4 cut(s)	443, 723, 1044, 1361
BstSFI	CTRYAG	1 cut(s)	674
BstSLI	GKGCMC	2 cut(s)	600, 673
BstV2I	GAAGAC	1 cut(s)	530
BstX2I	RGATCY	4 cut(s)	280, 635, 1366, 1700
BstXI	CCANNNNNNTGG	2 cut(s)	1026, 1960
BstYI	RGATCY	4 cut(s)	280, 635, 1366, 1700
BstZ17I	GTATAC	1 cut(s)	1604
BsuRI	GGCC	2 cut(s)	272, 1018
BtgI	CCRYGG	1 cut(s)	1953
BtgZI	GCGATG	1 cut(s)	1575
BtsCI	GGATG	8 cut(s)	116, 1108, 1370, 1499, 1645, 1909, 1914, 1981
BtsI	GCAGTG	1 cut(s)	2010
BtsIMutI	CAGTG	6 cut(s)	304, 620, 1103, 1631, 1996, 2010
Cac8I	GCNNGC	4 cut(s)	351, 1169, 1473, 1552
CaiI	CAGNNNCTG	1 cut(s)	313
CciI	TCATGA	3 cut(s)	1542, 1729, 2027
Cfr13I	GGNCC	4 cut(s)	421, 727, 1016, 1297
CseI	GACGC	1 cut(s)	1958
Csp6I	GTAC	6 cut(s)	398, 606, 1059, 1565, 1584, 1768
CviQI	GTAC	6 cut(s)	398, 606, 1059, 1565, 1584, 1768
DdeI	CTNAG	8 cut(s)	159, 168, 231, 551, 901, 1182, 1283, 1980
DraI	TTTAAA	1 cut(s)	1764
DraIII	CACNNNGTG	1 cut(s)	595
DrdI	GACNNNNNNGTC	2 cut(s)	419, 661
DseDI	GACNNNNNNGTC	2 cut(s)	419, 661
Eam1104I	CTCTTC	2 cut(s)	224, 1928
EarI	CTCTTC	2 cut(s)	224, 1928
EciI	GGCGGA	1 cut(s)	33
Ecl136II	GAGCTC	1 cut(s)	163
Eco130I	CCWWGG	5 cut(s)	32, 81, 1374, 1456, 1953
Eco24I	GRGCYC	1 cut(s)	165
Eco31I	GGTCTC	1 cut(s)	631
Eco47I	GGWCC	3 cut(s)	421, 727, 1297
Eco53kI	GAGCTC	1 cut(s)	163
Eco57I	CTGAAG	5 cut(s)	205, 519, 1527, 1655, 1795
EcoICRI	GAGCTC	1 cut(s)	163
EcoRI	GAATTC	1 cut(s)	1090
EcoRII	CCWGG	3 cut(s)	723, 1044, 1361
EcoT14I	CCWWGG	5 cut(s)	32, 81, 1374, 1456, 1953
EcoT22I	ATGCAT	1 cut(s)	1499
EcoT38I	GRGCYC	1 cut(s)	165
ErhI	CCWWGG	5 cut(s)	32, 81, 1374, 1456, 1953
FalI	AAGNNNNNCTT	4 cut(s)	387, 419, 1367, 1399
FaqI	GGGAC	1 cut(s)	1062
FauI	CCCGC	1 cut(s)	333
FauNDI	CATATG	2 cut(s)	602, 649
FbaI	TGATCA	1 cut(s)	15
FblI	GTMKAC	1 cut(s)	1603
FokI	GGATG	8 cut(s)	103, 1095, 1357, 1506, 1652, 1916, 1921, 1988
FriOI	GRGCYC	1 cut(s)	165
FspBI	CTAG	8 cut(s)	429, 494, 542, 731, 857, 1121, 1551, 1587
GsuI	CTGGAG	1 cut(s)	1541
HaeIII	GGCC	2 cut(s)	272, 1018
HapII	CCGG	2 cut(s)	444, 1698
HgaI	GACGC	1 cut(s)	1958
Hin1I	GRCGYC	2 cut(s)	1950, 1992
HincII	GTYRAC	2 cut(s)	88, 791
HindII	GTYRAC	2 cut(s)	88, 791
HindIII	AAGCTT	1 cut(s)	1610
HinfI	GANTC	8 cut(s)	132, 178, 216, 413, 490, 767, 1065, 1285
HpaI	GTTAAC	1 cut(s)	88
HpaII	CCGG	2 cut(s)	444, 1698
HphI	GGTGA	2 cut(s)	712, 1145
Hpy166II	GTNNAC	8 cut(s)	88, 598, 671, 791, 921, 1222, 1604, 1996
Hpy8I	GTNNAC	8 cut(s)	88, 598, 671, 791, 921, 1222, 1604, 1996
Hpy99I	CGWCG	3 cut(s)	106, 112, 278
HpyCH4III	ACNGT	5 cut(s)	299, 1098, 1157, 1569, 2000
HpyCH4IV	ACGT	3 cut(s)	207, 1855, 1992
HpyF10VI	GCNNNNNNNGC	9 cut(s)	43, 46, 55, 169, 337, 346, 449, 1784, 2012
HpyF3I	CTNAG	8 cut(s)	159, 168, 231, 551, 901, 1182, 1283, 1980
HpySE526I	ACGT	3 cut(s)	207, 1855, 1992
Hsp92I	GRCGYC	2 cut(s)	1950, 1992
Ksp22I	TGATCA	1 cut(s)	15
KspAI	GTTAAC	1 cut(s)	88
LmnI	GCTCC	6 cut(s)	83, 92, 168, 337, 1772, 1783
LweI	GCATC	8 cut(s)	268, 461, 520, 653, 1117, 1484, 1660, 1966
MaeI	CTAG	8 cut(s)	429, 494, 542, 731, 857, 1121, 1551, 1587
MaeII	ACGT	3 cut(s)	207, 1855, 1992
MaeIII	GTNAC	4 cut(s)	652, 838, 1185, 1988
MbiI	CCGCTC	1 cut(s)	340
MboII	GAAGA	8 cut(s)	211, 247, 535, 1137, 1379, 1421, 1520, 1945
MfeI	CAATTG	1 cut(s)	1782
MflI	RGATCY	4 cut(s)	280, 635, 1366, 1700
MhlI	GDGCHC	3 cut(s)	165, 600, 673
MlyI	GAGTC	5 cut(s)	210, 407, 499, 776, 1294
MmeI	TCCRAC	4 cut(s)	315, 340, 613, 1275
Mph1103I	ATGCAT	1 cut(s)	1499
MseI	TTAA	9 cut(s)	87, 267, 845, 957, 1197, 1307, 1754, 1763, 1790
MslI	CAYNNNNRTG	3 cut(s)	1577, 1833, 1958
MspA1I	CMGCKG	1 cut(s)	310
MspCI	CTTAAG	1 cut(s)	266
MspI	CCGG	2 cut(s)	444, 1698
MspR9I	CCNGG	4 cut(s)	445, 725, 1046, 1363
MunI	CAATTG	1 cut(s)	1782
MvaI	CCWGG	3 cut(s)	725, 1046, 1363
MwoI	GCNNNNNNNGC	9 cut(s)	43, 46, 55, 169, 337, 346, 449, 1784, 2012
NciI	CCSGG	1 cut(s)	445
NcoI	CCATGG	1 cut(s)	1953
NdeI	CATATG	2 cut(s)	602, 649
NheI	GCTAGC	1 cut(s)	1550
NlaIV	GGNNCC	6 cut(s)	94, 514, 618, 1299, 1368, 1629
NmeAIII	GCCGAG	1 cut(s)	559
NmuCI	GTSAC	3 cut(s)	652, 1185, 1988
NsiI	ATGCAT	1 cut(s)	1499
NspI	RCATGY	2 cut(s)	1080, 1475
PaeI	GCATGC	1 cut(s)	1475
PagI	TCATGA	3 cut(s)	1542, 1729, 2027
PcsI	WCGNNNNNNNCGW	1 cut(s)	110
PfeI	GAWTC	3 cut(s)	132, 178, 1065
PflMI	CCANNNNNTGG	1 cut(s)	33
PleI	GAGTC	5 cut(s)	210, 407, 498, 775, 1293
PpsI	GAGTC	5 cut(s)	210, 407, 498, 775, 1293
Psp124BI	GAGCTC	1 cut(s)	165
Psp6I	CCWGG	3 cut(s)	723, 1044, 1361
PspGI	CCWGG	3 cut(s)	723, 1044, 1361
PspN4I	GGNNCC	6 cut(s)	94, 514, 618, 1299, 1368, 1629
PspPI	GGNCC	4 cut(s)	421, 727, 1016, 1297
PstNI	CAGNNNCTG	1 cut(s)	313
PsuI	RGATCY	4 cut(s)	280, 635, 1366, 1700
PvuII	CAGCTG	1 cut(s)	310
RsaI	GTAC	6 cut(s)	399, 607, 1060, 1566, 1585, 1769
RsaNI	GTAC	6 cut(s)	398, 606, 1059, 1565, 1584, 1768
RseI	CAYNNNNRTG	3 cut(s)	1577, 1833, 1958
SacI	GAGCTC	1 cut(s)	165
SaqAI	TTAA	9 cut(s)	87, 267, 845, 957, 1197, 1307, 1754, 1763, 1790
Sau96I	GGNCC	4 cut(s)	421, 727, 1016, 1297
ScaI	AGTACT	1 cut(s)	399
SchI	GAGTC	5 cut(s)	210, 407, 499, 776, 1294
ScrFI	CCNGG	4 cut(s)	445, 725, 1046, 1363
SduI	GDGCHC	3 cut(s)	165, 600, 673
SfaNI	GCATC	8 cut(s)	268, 461, 520, 653, 1117, 1484, 1660, 1966
SfcI	CTRYAG	1 cut(s)	674
SinI	GGWCC	3 cut(s)	421, 727, 1297
SmiMI	CAYNNNNRTG	3 cut(s)	1577, 1833, 1958
SmlI	CTYRAG	4 cut(s)	266, 369, 382, 1103
SmoI	CTYRAG	4 cut(s)	266, 369, 382, 1103
SphI	GCATGC	1 cut(s)	1475
SsiI	CCGC	6 cut(s)	8, 24, 44, 47, 340, 1131
SspI	AATATT	2 cut(s)	241, 1201
SspMI	CTAG	8 cut(s)	429, 494, 542, 731, 857, 1121, 1551, 1587
SstI	GAGCTC	1 cut(s)	165
StyD4I	CCNGG	4 cut(s)	443, 723, 1044, 1361
StyI	CCWWGG	5 cut(s)	32, 81, 1374, 1456, 1953
TaaI	ACNGT	5 cut(s)	299, 1098, 1157, 1569, 2000
TaiI	ACGT	3 cut(s)	210, 1858, 1995
TaqI	TCGA	3 cut(s)	276, 1407, 1925
TatI	WGTACW	2 cut(s)	397, 1564
TauI	GCSGC	2 cut(s)	11, 49
TfiI	GAWTC	3 cut(s)	132, 178, 1065
Tru1I	TTAA	9 cut(s)	87, 267, 845, 957, 1197, 1307, 1754, 1763, 1790
Tru9I	TTAA	9 cut(s)	87, 267, 845, 957, 1197, 1307, 1754, 1763, 1790
TscAI	CASTG	6 cut(s)	304, 627, 1103, 1638, 2003, 2017
TseFI	GTSAC	3 cut(s)	652, 1185, 1988
Tsp45I	GTSAC	3 cut(s)	652, 1185, 1988
TspGWI	ACGGA	3 cut(s)	105, 623, 1785
TspRI	CASTG	6 cut(s)	304, 627, 1103, 1638, 2003, 2017
Van91I	CCANNNNNTGG	1 cut(s)	33
Vha464I	CTTAAG	1 cut(s)	266
VneI	GTGCAC	2 cut(s)	596, 669
VpaK11BI	GGWCC	3 cut(s)	421, 727, 1297
XapI	RAATTY	5 cut(s)	738, 807, 1090, 1396, 1652
XbaI	TCTAGA	1 cut(s)	856
XceI	RCATGY	2 cut(s)	1080, 1475
XmiI	GTMKAC	1 cut(s)	1603
XspI	CTAG	8 cut(s)	429, 494, 542, 731, 857, 1121, 1551, 1587
ZraI	GACGTC	1 cut(s)	1993
ZrmI	AGTACT	1 cut(s)	399
Zsp2I	ATGCAT	1 cut(s)	1499

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.